AT5G36160

Aminotransferase class I and II

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
14232885 .. 14235226
2342 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G36160.1

Sequence Viewer

Length: 1263 bp
ATGGGAGAAAACGGAGCCAAGCGATGGAACTTCGGAGCTAACGAGGTCGTCGAACGATCTAACTCACTTACCATTCGTGATTACCTTAACACCTTAATCAATTGTCTCGACGGTGGTGATGTAAGACCCGTCATCCCACTAGGTCACGGCGATCCTTCTCCGTTCCCGAGCTTTCGTACCGATCAAGCCGCTGTTGAAGCCATCTGTGATGCTGTCCGTTCGACCAAGTTTAACAACTACTCTTCTTCTTCCGGTGTTCCTGTCGCTAGGAAGGCTGTTGCAGAGTACCTCTCTAGTGATCTCTCTTACCAGATATCACCAAATGATGTTCATATCACAGCTGGTTGTGTGCAAGCCATTGAGATTTTGATATCCGCTCTCGCAATTCCTGGAGCTAACATTCTGCTACCTAGGCCTACTTACCCGATGTACGATTCCCGAGCGGCTTTTTGCCAACTCGAGGTTCGTTATTTCGACCTCCTACCGGAAAATGGTTGGGATGTTGATCTAGATGGAGTTGAAGCTCTTGCGGATGACAAAACCGTTGCTATACTTGTTATCAACCCTTGCAATCCATGTGGGAATGTTTTCTCTCGCCAACATCTTCAAAAGATTGCAGAGACGGCTTGCAAGCTTGGTATACTTGTGATCGCAGACGAAGTCTATGACCATTTTGCCTTTGGGGATAAACCATTTGTGTCCATGGCAGAGTTTGCAGAGCTAGTGCCTGTTATTGTCTTAGGTGCTATATCTAAAAGATGGTTTGTTCCTGGATGGAGACTTGGTTGGATGGTGACTCTTGACCCTCATGGCATCATGAAAGATTCTGGGTTTGTTCAGACTCTTATCAATGTTGTCAACATGTCGACGGATCCTGCAACGTTTATTCAGGGAGCAATGCCTGATATCATTGGGAATACAAAGGAAGAGTTCTTCTCATCAAAACTTGAAATGGTGAAAAAATGTGCAGAGATTTGTTATGAGGAGCTTATGAAGATTCCTTGCATCACTTGCCCCTGCAAACCCGAGGGCTCAATGTTCACGATGGTGAAGTTAAACTTTTCACTACTCGAAGATATCAGTGATGATTTGGACTTCTGCTCCAAGCTGGCTAAAGAGGAATCTATGATCATCCTACCAGGTCAAGCTGTTGGGCTTAAGAACTGGCTACGTATCACCTTTGCAGTTGAGCTTGAGCTTCTCATAGAAGGGTTTTCCAGGCTAAAGAACTTTACTGAGAGACACTCCAAGAATCAGCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0001558 GO:0001560 GO:0003674 GO:0003824 GO:0004121 GO:0004838 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005829 GO:0006082 GO:0006520 GO:0006570 GO:0006572 GO:0006725 GO:0006766 GO:0006775 GO:0006790 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0007154 GO:0007275 GO:0008150 GO:0008152 GO:0008483 GO:0009056 GO:0009058 GO:0009063 GO:0009072 GO:0009074 GO:0009110 GO:0009605 GO:0009611 GO:0009628 GO:0009636 GO:0009651 GO:0009683 GO:0009684 GO:0009719 GO:0009725 GO:0009737 GO:0009753 GO:0009850 GO:0009851 GO:0009987 GO:0009991 GO:0010033 GO:0010188 GO:0010189 GO:0010817 GO:0016020 GO:0016053 GO:0016054 GO:0016143 GO:0016144 GO:0016740 GO:0016769 GO:0016829 GO:0016846 GO:0018130 GO:0019438 GO:0019439 GO:0019748 GO:0019752 GO:0019757 GO:0019758 GO:0019760 GO:0019761 GO:0022622 GO:0031668 GO:0032501 GO:0032502 GO:0032787 GO:0033993 GO:0034641 GO:0034754 GO:0040008 GO:0042221 GO:0042360 GO:0042362 GO:0042430 GO:0042435 GO:0042445 GO:0042446 GO:0042538 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044271 GO:0044272 GO:0044281 GO:0044282 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0046394 GO:0046395 GO:0046483 GO:0048046 GO:0048364 GO:0048731 GO:0048830 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051716 GO:0065007 GO:0065008 GO:0070547 GO:0071496 GO:0071704 GO:0072330 GO:0080108 GO:0097305 GO:0099402 GO:1901135 GO:1901137 GO:1901360 GO:1901361 GO:1901362 GO:1901564 GO:1901565 GO:1901566 GO:1901575 GO:1901576 GO:1901605 GO:1901606 GO:1901615 GO:1901617 GO:1901657 GO:1901659 GO:1901700
Pfam Domains
Protein Families

Protein Analysis

420

Amino Acids

46.45

Weight (kDa)

4.89

Isoelectric Point (pI)

43.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aminotran_1_2 PF00155 43 - 396 2e-56 Aminotransferase class I and II
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 24
AccBSI CCGCTC 2 cut(s) 377, 443
AccI GTMKAC 2 cut(s) 640, 866
AciI CCGC 4 cut(s) 189, 375, 443, 530
AclI AACGTT 1 cut(s) 881
AclWI GGATC 3 cut(s) 146, 866, 879
AfaI GTAC 3 cut(s) 178, 287, 431
AfiI CCNNNNNNNGG 4 cut(s) 24, 460, 484, 491
AflII CTTAAG 1 cut(s) 1157
AflIII ACRYGT 1 cut(s) 861
AgsI TTSAA 4 cut(s) 197, 521, 608, 950
AjnI CCWGG 4 cut(s) 388, 769, 1138, 1217
AjuI GAANNNNNNNTTGG 2 cut(s) 447, 479
AleI CACNNNNGTG 1 cut(s) 1046
Alw26I GTCTC 4 cut(s) 110, 614, 772, 1234
AlwI GGATC 3 cut(s) 146, 866, 879
Ama87I CYCGRG 4 cut(s) 166, 438, 458, 1025
AoxI GGCC 1 cut(s) 413
Asp700I GAANNNNTTC 1 cut(s) 587
AspA2I CCTAGG 1 cut(s) 410
AsuHPI GGTGA 6 cut(s) 128, 309, 805, 967, 1060, 1168
AvaI CYCGRG 4 cut(s) 166, 438, 458, 1025
AvrII CCTAGG 1 cut(s) 410
BamHI GGATCC 1 cut(s) 871
BanII GRGCYC 1 cut(s) 1034
BccI CCATC 7 cut(s) 18, 209, 506, 753, 768, 784, 1039
BceAI ACGGC 2 cut(s) 163, 639
BciT130I CCWGG 4 cut(s) 390, 771, 1140, 1219
BclI TGATCA 1 cut(s) 1128
BcoDI GTCTC 4 cut(s) 110, 614, 772, 1234
BfaI CTAG 6 cut(s) 140, 267, 294, 411, 509, 722
BfrI CTTAAG 1 cut(s) 1157
BisI GCNGC 2 cut(s) 189, 444
BlnI CCTAGG 1 cut(s) 410
BlsI GCNGC 2 cut(s) 190, 445
Bme1390I CCNGG 4 cut(s) 390, 771, 1140, 1219
BmeT110I CYCGRG 4 cut(s) 166, 438, 458, 1025
BmiI GGNNCC 2 cut(s) 16, 873
BmrFI CCNGG 4 cut(s) 390, 771, 1140, 1219
BmsI GCATC 3 cut(s) 199, 822, 1014
BplI GAGNNNNNCTC 6 cut(s) 275, 307, 920, 952, 1229, 1261
BpmI CTGGAG 1 cut(s) 411
BpuEI CTTGAG 1 cut(s) 1214
BsaAI YACGTR 1 cut(s) 1172
BsaBI GATNNNNATC 1 cut(s) 504
BsaJI CCNNGG 3 cut(s) 410, 702, 1026
BsaWI WCCGGW 2 cut(s) 251, 484
BsaXI ACNNNNNCTCC 4 cut(s) 769, 799, 1085, 1115
Bsc4I CCNNNNNNNGG 4 cut(s) 24, 460, 484, 491
Bse1I ACTGG 1 cut(s) 1169
Bse3DI GCAATG 1 cut(s) 903
Bse8I GATNNNNATC 1 cut(s) 504
BseBI CCWGG 4 cut(s) 390, 771, 1140, 1219
BseDI CCNNGG 3 cut(s) 410, 702, 1026
BseGI GGATG 6 cut(s) 132, 505, 538, 779, 795, 1131
BseJI GATNNNNATC 1 cut(s) 504
BseLI CCNNNNNNNGG 4 cut(s) 24, 460, 484, 491
BseMI GCAATG 1 cut(s) 903
BseMII CTCAG 1 cut(s) 1227
BseNI ACTGG 1 cut(s) 1169
BseRI GAGGAG 1 cut(s) 998
BsgI GTGCAG 1 cut(s) 987
BshFI GGCC 1 cut(s) 415
BsiHKCI CYCGRG 4 cut(s) 166, 438, 458, 1025
BsiSI CCGG 2 cut(s) 252, 485
BslI CCNNNNNNNGG 4 cut(s) 24, 460, 484, 491
BsmAI GTCTC 4 cut(s) 110, 614, 772, 1234
BsmBI CGTCTC 1 cut(s) 614
BsnI GGCC 1 cut(s) 415
BsoBI CYCGRG 4 cut(s) 166, 438, 458, 1025
Bsp1286I GDGCHC 1 cut(s) 1034
Bsp143I GATC 8 cut(s) 56, 151, 181, 298, 505, 648, 871, 1128
Bsp19I CCATGG 1 cut(s) 702
BspACI CCGC 4 cut(s) 189, 375, 443, 530
BspANI GGCC 1 cut(s) 415
BspCNI CTCAG 1 cut(s) 1228
BspHI TCATGA 1 cut(s) 816
BspLI GGNNCC 2 cut(s) 16, 873
BspPI GGATC 3 cut(s) 146, 866, 879
BspTI CTTAAG 1 cut(s) 1157
BsrBI CCGCTC 2 cut(s) 377, 443
BsrDI GCAATG 1 cut(s) 903
BsrI ACTGG 1 cut(s) 1169
BssECI CCNNGG 3 cut(s) 410, 702, 1026
BssMI GATC 8 cut(s) 56, 151, 181, 298, 505, 648, 871, 1128
BssNAI GTATAC 1 cut(s) 641
BssT1I CCWWGG 2 cut(s) 410, 702
Bst1107I GTATAC 1 cut(s) 641
Bst2UI CCWGG 4 cut(s) 390, 771, 1140, 1219
Bst4CI ACNGT 2 cut(s) 113, 544
Bst6I CTCTTC 2 cut(s) 247, 921
BstAFI CTTAAG 1 cut(s) 1157
BstAPI GCANNNNNTGC 2 cut(s) 713, 1011
BstBAI YACGTR 1 cut(s) 1172
BstC8I GCNNGC 4 cut(s) 354, 628, 632, 1110
BstDEI CTNAG 2 cut(s) 739, 1236
BstDSI CCRYGG 1 cut(s) 702
BstF5I GGATG 6 cut(s) 132, 505, 538, 779, 795, 1131
BstKTI GATC 8 cut(s) 59, 154, 184, 301, 508, 651, 874, 1131
BstMAI GTCTC 4 cut(s) 110, 614, 772, 1234
BstMBI GATC 8 cut(s) 56, 151, 181, 298, 505, 648, 871, 1128
BstMWI GCNNNNNNNGC 6 cut(s) 197, 272, 412, 623, 713, 1011
BstNI CCWGG 4 cut(s) 390, 771, 1140, 1219
BstNSI RCATGY 1 cut(s) 865
BstSCI CCNGG 4 cut(s) 388, 769, 1138, 1217
BstSNI TACGTA 1 cut(s) 1172
BstX2I RGATCY 1 cut(s) 871
BstYI RGATCY 1 cut(s) 871
BstZ17I GTATAC 1 cut(s) 641
BsuRI GGCC 1 cut(s) 415
BtgI CCRYGG 1 cut(s) 702
BtgZI GCGATG 1 cut(s) 37
BtsCI GGATG 6 cut(s) 132, 505, 538, 779, 795, 1131
BtsIMutI CAGTG 1 cut(s) 1087
Cac8I GCNNGC 4 cut(s) 354, 628, 632, 1110
CciI TCATGA 1 cut(s) 816
CsiI ACCWGGT 1 cut(s) 1138
Csp6I GTAC 3 cut(s) 177, 286, 430
CspCI CAANNNNNGTGG 2 cut(s) 559, 594
CviAII CATG 6 cut(s) 576, 703, 809, 817, 862, 1260
CviQI GTAC 3 cut(s) 177, 286, 430
DdeI CTNAG 2 cut(s) 739, 1236
DpnI GATC 8 cut(s) 58, 153, 183, 300, 507, 650, 873, 1130
DpnII GATC 8 cut(s) 56, 151, 181, 298, 505, 648, 871, 1128
Eam1104I CTCTTC 2 cut(s) 247, 921
EarI CTCTTC 2 cut(s) 247, 921
Eco105I TACGTA 1 cut(s) 1172
Eco130I CCWWGG 2 cut(s) 410, 702
Eco147I AGGCCT 1 cut(s) 415
Eco24I GRGCYC 1 cut(s) 1034
Eco32I GATATC 4 cut(s) 315, 372, 907, 1078
Eco88I CYCGRG 4 cut(s) 166, 438, 458, 1025
EcoRII CCWGG 4 cut(s) 388, 769, 1138, 1217
EcoRV GATATC 4 cut(s) 315, 372, 907, 1078
EcoT14I CCWWGG 2 cut(s) 410, 702
EcoT38I GRGCYC 1 cut(s) 1034
ErhI CCWWGG 2 cut(s) 410, 702
Esp3I CGTCTC 1 cut(s) 614
FaeI CATG 6 cut(s) 579, 706, 812, 820, 865, 1263
FalI AAGNNNNNCTT 2 cut(s) 1043, 1075
FatI CATG 6 cut(s) 575, 702, 808, 816, 861, 1259
FbaI TGATCA 1 cut(s) 1128
FblI GTMKAC 2 cut(s) 640, 866
Fnu4HI GCNGC 2 cut(s) 189, 444
FokI GGATG 6 cut(s) 119, 512, 545, 786, 802, 1118
FriOI GRGCYC 1 cut(s) 1034
Fsp4HI GCNGC 2 cut(s) 189, 444
FspBI CTAG 6 cut(s) 140, 267, 294, 411, 509, 722
GluI GCNGC 2 cut(s) 189, 444
GsuI CTGGAG 1 cut(s) 411
HaeIII GGCC 1 cut(s) 415
HapII CCGG 2 cut(s) 252, 485
Hin1II CATG 6 cut(s) 579, 706, 812, 820, 865, 1263
HincII GTYRAC 2 cut(s) 859, 867
HindII GTYRAC 2 cut(s) 859, 867
HindIII AAGCTT 1 cut(s) 632
HinfI GANTC 7 cut(s) 434, 796, 824, 841, 997, 1121, 1252
HpaII CCGG 2 cut(s) 252, 485
HphI GGTGA 6 cut(s) 128, 309, 805, 967, 1060, 1168
Hpy166II GTNNAC 4 cut(s) 641, 859, 867, 1041
Hpy188I TCNGA 2 cut(s) 35, 840
Hpy188III TCNNGA 8 cut(s) 77, 107, 166, 438, 509, 800, 817, 1042
Hpy8I GTNNAC 4 cut(s) 641, 859, 867, 1041
Hpy99I CGWCG 3 cut(s) 53, 113, 871
HpyAV CCTTC 3 cut(s) 165, 265, 1202
HpyCH4III ACNGT 2 cut(s) 113, 544
HpyCH4IV ACGT 2 cut(s) 881, 1171
HpyF10VI GCNNNNNNNGC 6 cut(s) 197, 272, 412, 623, 713, 1011
HpyF3I CTNAG 2 cut(s) 739, 1236
HpySE526I ACGT 2 cut(s) 881, 1171
Hsp92II CATG 6 cut(s) 579, 706, 812, 820, 865, 1263
Ksp22I TGATCA 1 cut(s) 1128
Kzo9I GATC 8 cut(s) 56, 151, 181, 298, 505, 648, 871, 1128
LmnI GCTCC 6 cut(s) 14, 35, 392, 893, 985, 1106
LweI GCATC 3 cut(s) 199, 822, 1014
MabI ACCWGGT 1 cut(s) 1138
MaeI CTAG 6 cut(s) 140, 267, 294, 411, 509, 722
MaeII ACGT 2 cut(s) 881, 1171
MaeIII GTNAC 2 cut(s) 143, 793
MalI GATC 8 cut(s) 58, 153, 183, 300, 507, 650, 873, 1130
MbiI CCGCTC 2 cut(s) 377, 443
MboI GATC 8 cut(s) 56, 151, 181, 298, 505, 648, 871, 1128
MboII GAAGA 8 cut(s) 234, 237, 240, 596, 925, 938, 1006, 1085
MfeI CAATTG 1 cut(s) 100
MflI RGATCY 1 cut(s) 871
MhlI GDGCHC 1 cut(s) 1034
MluCI AATT 2 cut(s) 100, 384
MlyI GAGTC 2 cut(s) 790, 835
MmeI TCCRAC 1 cut(s) 767
MnlI CCTC 8 cut(s) 37, 299, 454, 488, 816, 976, 1021, 1111
MroXI GAANNNNTTC 1 cut(s) 587
MseI TTAA 5 cut(s) 87, 95, 231, 1055, 1158
MslI CAYNNNNRTG 1 cut(s) 1046
MspA1I CMGCKG 2 cut(s) 191, 341
MspCI CTTAAG 1 cut(s) 1157
MspI CCGG 2 cut(s) 252, 485
MspR9I CCNGG 4 cut(s) 390, 771, 1140, 1219
MunI CAATTG 1 cut(s) 100
MvaI CCWGG 4 cut(s) 390, 771, 1140, 1219
MwoI GCNNNNNNNGC 6 cut(s) 197, 272, 412, 623, 713, 1011
NcoI CCATGG 1 cut(s) 702
NdeII GATC 8 cut(s) 56, 151, 181, 298, 505, 648, 871, 1128
NlaIII CATG 6 cut(s) 579, 706, 812, 820, 865, 1263
NlaIV GGNNCC 2 cut(s) 16, 873
NmuCI GTSAC 2 cut(s) 143, 793
NspI RCATGY 1 cut(s) 865
OliI CACNNNNGTG 1 cut(s) 1046
PaeR7I CTCGAG 1 cut(s) 458
PagI TCATGA 1 cut(s) 816
PceI AGGCCT 1 cut(s) 415
PciI ACATGT 1 cut(s) 861
PcsI WCGNNNNNNNCGW 2 cut(s) 39, 48
PdmI GAANNNNTTC 1 cut(s) 587
PfeI GAWTC 5 cut(s) 434, 824, 997, 1121, 1252
PflFI GACNNNGTC 1 cut(s) 659
PflMI CCANNNNNTGG 1 cut(s) 24
PfoI TCCNGGA 2 cut(s) 388, 769
PkrI GCNGC 2 cut(s) 190, 445
PleI GAGTC 2 cut(s) 790, 835
PpsI GAGTC 2 cut(s) 790, 835
Ppu21I YACGTR 1 cut(s) 1172
PscI ACATGT 1 cut(s) 861
Psp1406I AACGTT 1 cut(s) 881
Psp6I CCWGG 4 cut(s) 388, 769, 1138, 1217
PspGI CCWGG 4 cut(s) 388, 769, 1138, 1217
PspN4I GGNNCC 2 cut(s) 16, 873
PspXI VCTCGAGB 1 cut(s) 458
PsuI RGATCY 1 cut(s) 871
PsyI GACNNNGTC 1 cut(s) 659
PvuII CAGCTG 1 cut(s) 341
RsaI GTAC 3 cut(s) 178, 287, 431
RsaNI GTAC 3 cut(s) 177, 286, 430
RseI CAYNNNNRTG 1 cut(s) 1046
SalI GTCGAC 1 cut(s) 865
SaqAI TTAA 5 cut(s) 87, 95, 231, 1055, 1158
SatI GCNGC 2 cut(s) 189, 444
Sau3AI GATC 8 cut(s) 56, 151, 181, 298, 505, 648, 871, 1128
SchI GAGTC 2 cut(s) 790, 835
ScrFI CCNGG 4 cut(s) 390, 771, 1140, 1219
SduI GDGCHC 1 cut(s) 1034
SexAI ACCWGGT 1 cut(s) 1138
SfaNI GCATC 3 cut(s) 199, 822, 1014
Sfr274I CTCGAG 1 cut(s) 458
SlaI CTCGAG 1 cut(s) 458
SmiMI CAYNNNNRTG 1 cut(s) 1046
SmlI CTYRAG 3 cut(s) 458, 1157, 1193
SmoI CTYRAG 3 cut(s) 458, 1157, 1193
SnaBI TACGTA 1 cut(s) 1172
Sse9I AATT 2 cut(s) 100, 384
SseBI AGGCCT 1 cut(s) 415
SsiI CCGC 4 cut(s) 189, 375, 443, 530
SspMI CTAG 6 cut(s) 140, 267, 294, 411, 509, 722
StuI AGGCCT 1 cut(s) 415
StyD4I CCNGG 4 cut(s) 388, 769, 1138, 1217
StyI CCWWGG 2 cut(s) 410, 702
TaaI ACNGT 2 cut(s) 113, 544
TaiI ACGT 2 cut(s) 884, 1174
TaqI TCGA 7 cut(s) 51, 108, 221, 459, 474, 866, 1071
TasI AATT 2 cut(s) 100, 384
TauI GCSGC 2 cut(s) 191, 446
TfiI GAWTC 5 cut(s) 434, 824, 997, 1121, 1252
Tru1I TTAA 5 cut(s) 87, 95, 231, 1055, 1158
Tru9I TTAA 5 cut(s) 87, 95, 231, 1055, 1158
TscAI CASTG 1 cut(s) 1087
TseFI GTSAC 2 cut(s) 143, 793
Tsp45I GTSAC 2 cut(s) 143, 793
TspDTI ATGAA 3 cut(s) 320, 833, 1007
TspGWI ACGGA 4 cut(s) 27, 150, 206, 884
TspRI CASTG 1 cut(s) 1087
Tth111I GACNNNGTC 1 cut(s) 659
Van91I CCANNNNNTGG 1 cut(s) 24
Vha464I CTTAAG 1 cut(s) 1157
XbaI TCTAGA 1 cut(s) 508
XceI RCATGY 1 cut(s) 865
XcmI CCANNNNNNNNNTGG 1 cut(s) 677
XhoI CTCGAG 1 cut(s) 458
XmaJI CCTAGG 1 cut(s) 410
XmiI GTMKAC 2 cut(s) 640, 866
XmnI GAANNNNTTC 1 cut(s) 587
XspI CTAG 6 cut(s) 140, 267, 294, 411, 509, 722
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.