Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0008956

Physical Location & Seq

Genomic Coordinates Forward (+)

43545713 .. 43551065

Gene Structure 5353 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00116410.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1275 bp

ATGGAGAATGGGAATGGTTATTCGCATCAGAAATGGAATTTCCGAGGGAATGAAGAACTGAACACTGCCTCAATCTCCGTCCGTGGTGTTCTCAACACCTTAGCAAAGAATCTCAACTCCGACGATCGACGGTCCACCATTATGCTGGGCCGCGGCGACCCGACTGAGTTTCCATCATTCTGGACGGCTCCTCCGGCCGCTGATGCCGTCTCAGATGCCCTCCAATCCTTCAAGTTCAACTCTTATTGTCCTACCGGCGGTGTTTTCGAAGCAAGAAGAGCTATTGCAGAGTATCTCTCCCGTGACCTCTCAAGCCAGCTATTGCCTGAAGATGTATATCTCACTGTTGGTTGCACACAAGCAATCGAGATCATAGTGTCTGTTCTTGCACGTCCTGGTGCCAATATTCTGCTTCCCAAACCTGGTTACCCACAGTATGAAGCTCGAGCAGCTTTTGACCATCTTGAAGTTCGCCATTTTGATCTTATTCCTGAAAAAGGTTGGGAGGTGGATCTTGATTCAGTTGAAGCTCTTGTGGATAACAACACTGCTGCCATTGTTATCATTAACCCTAGCAATCCTTGTGGAAATGTCTTCACATACCAGCATTTGAAGAAGATTGCAGAAACAGCAAAGAAACTGGGGATCTTTGTGATTTCGGATGAAGTTTATGGCCGTTTGGCTTTTGGCAGTAACCCTTTTGTGCCTATGGGAAAGTTCAGTTCAATTGTACCAGTTCTTACACTTGGTTCTATATCAAAGACATGGATTGTTCCTGGCTGGAGACTTGGCTGGATTGTGAAAAATGATCCCGACGGCATCCTTGAAAAAACTGGGATCGTGGACAGCATTAAGAACTATCTTGATATCACTTGTGACCCGGCAACCTTTGTTCAGGGAGCAATACCTCAAATCATTGAGCGCACAAAAGAGAGTTTTTTCTCCAATATAATTGGCATAATGAGAGAAGCTGTGGATATGTTATATGACATGATTAAGGAAATCCCATGCATTACTTGCCCACATAAACCTGAAGGTTCCATGGTTGTATTGGTTAAACTAAACCTATCGGCACTTGAAGGCATTGATGACGATATACAGTTCTGTCTTAAGCTGTCCAAAGAGGAGTCTGTGATTGTTCTTCCAGGGGTTACTGTTGGACTGAAAAATTGGCTCCGCATTACTTTTGCTGTTGAACCTCAAGTACTTAAAGAAGGGCTTGAAAGGATCAAAGCCTTCTCCCAAAGACATGCCAAGAAGCAATATGGTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004838 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006570 GO:0006572 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008483 GO:0009056 GO:0009063 GO:0009072 GO:0009074 GO:0009987 GO:0016054 GO:0016740 GO:0016769 GO:0019439 GO:0019752 GO:0043436 GO:0044237 GO:0044238 GO:0044248 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046395 GO:0070547 GO:0071704 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575 GO:1901605 GO:1901606

KEGG Pathways

Metabolic & Signaling

ko00130 ko00270 ko00350 ko00360 ko00400 ko00401 ko00950 ko00960 ko01100 ko01110 ko01130 ko01230 map00130 map00270 map00350 map00360 map00400 map00401 map00950 map00960 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

Aminotran_1_2

Protein Analysis

424

Amino Acids

46.97

Weight (kDa)

5.46

Isoelectric Point (pI)

30.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aminotran_1_2	PF00155	47 - 410	1.1e-55	Aminotransferase class I and II

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008956)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G36160
fragaria_vesca	FvH4_6g26610 FvH4_6g26610 FvH4_6g26610 FvH4_6g26610
malus_domestica	MD17G1235000.v1.1
prunus_persica	Prupe.3G133000_v2.0.a1 Prupe.3G133100_v2.0.a1 Prupe.3G133100_v2.0.a1 Prupe.3G133100_v2.0.a1
pyrus_communis	pycom17g23840
rosa_chinensis	RchiOBHm_Chr2g0127461
rosa_laevigata	RLG00000018961
rosa_roxburghii	Rroxscaffold_2G00081020 Rroxscaffold_2G00116410
rosa_rugosa	Rorug02G0274800 Rorug02G0274900
rosa_samantha	Rh2AG325900 Rh2BG335500 Rh2CG313700 Rh2DG353100
rosa_wichuraiana	Rw2G026440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	398
AccII	CGCG	1 cut(s)	153
AciI	CCGC	5 cut(s)	151, 153, 198, 258, 1177
AclWI	GGATC	5 cut(s)	519, 653, 803, 845, 1235
AcoI	YGGCCR	2 cut(s)	195, 673
AcsI	RAATTY	1 cut(s)	37
AcuI	CTGAAG	2 cut(s)	348, 1053
AfaI	GTAC	2 cut(s)	732, 1206
AfiI	CCNNNNNNNGG	3 cut(s)	257, 422, 497
AflII	CTTAAG	1 cut(s)	1109
AjiI	CACGTC	1 cut(s)	392
AjnI	CCWGG	4 cut(s)	394, 421, 775, 1144
AluBI	AGCT	7 cut(s)	281, 319, 443, 452, 530, 971, 1114
AluI	AGCT	7 cut(s)	281, 319, 443, 452, 530, 971, 1114
Alw26I	GTCTC	2 cut(s)	214, 778
AlwI	GGATC	5 cut(s)	519, 653, 803, 845, 1235
Ama87I	CYCGRG	1 cut(s)	444
AoxI	GGCC	3 cut(s)	148, 195, 673
ApeKI	GCWGC	2 cut(s)	449, 551
ApoI	RAATTY	1 cut(s)	37
AspLEI	GCGC	1 cut(s)	924
AspS9I	GGNCC	2 cut(s)	132, 148
AsuC2I	CCSGG	1 cut(s)	881
AsuII	TTCGAA	1 cut(s)	267
AvaI	CYCGRG	1 cut(s)	444
AvaII	GGWCC	1 cut(s)	132
BanI	GGYRCC	1 cut(s)	398
BbsI	GAAGAC	1 cut(s)	586
BbvI	GCAGC	2 cut(s)	461, 538
BccI	CCATC	2 cut(s)	181, 468
BceAI	ACGGC	4 cut(s)	191, 201, 660, 832
BciT130I	CCWGG	4 cut(s)	396, 423, 777, 1146
BcnI	CCSGG	1 cut(s)	881
BcoDI	GTCTC	2 cut(s)	214, 778
BfaI	CTAG	1 cut(s)	573
BfrI	CTTAAG	1 cut(s)	1109
BisI	GCNGC	5 cut(s)	151, 154, 198, 450, 552
BlsI	GCNGC	5 cut(s)	152, 155, 199, 451, 553
BmcAI	AGTACT	1 cut(s)	1206
Bme1390I	CCNGG	5 cut(s)	396, 423, 777, 881, 1146
Bme18I	GGWCC	1 cut(s)	132
BmeT110I	CYCGRG	1 cut(s)	444
BmgBI	CACGTC	1 cut(s)	392
BmgT120I	GGNCC	2 cut(s)	132, 148
BmiI	GGNNCC	4 cut(s)	189, 400, 1039, 1175
BmrFI	CCNGG	5 cut(s)	396, 423, 777, 881, 1146
BmrI	ACTGGG	2 cut(s)	650, 843
BmsI	GCATC	4 cut(s)	34, 193, 205, 828
BmuI	ACTGGG	2 cut(s)	650, 843
BpiI	GAAGAC	1 cut(s)	586
BplI	GAGNNNNNCTC	2 cut(s)	281, 313
BpmI	CTGGAG	1 cut(s)	802
Bpu10I	CCTNAGC	1 cut(s)	100
Bpu14I	TTCGAA	1 cut(s)	267
BpuEI	CTTGAG	2 cut(s)	295, 1185
BpuMI	CCSGG	1 cut(s)	881
BsaBI	GATNNNNATC	1 cut(s)	336
BsaJI	CCNNGG	5 cut(s)	43, 82, 151, 1041, 1145
BsaXI	ACNNNNNCTCC	2 cut(s)	175, 205
Bsc4I	CCNNNNNNNGG	3 cut(s)	257, 422, 497
Bse118I	RCCGGY	1 cut(s)	254
Bse1I	ACTGG	3 cut(s)	645, 734, 838
Bse8I	GATNNNNATC	1 cut(s)	336
BseBI	CCWGG	4 cut(s)	396, 423, 777, 1146
BseDI	CCNNGG	5 cut(s)	43, 82, 151, 1041, 1145
BseGI	GGATG	2 cut(s)	667, 819
BseJI	GATNNNNATC	1 cut(s)	336
BseLI	CCNNNNNNNGG	3 cut(s)	257, 422, 497
BseMII	CTCAG	2 cut(s)	156, 225
BseNI	ACTGG	3 cut(s)	645, 734, 838
BseRI	GAGGAG	2 cut(s)	180, 1139
BseX3I	CGGCCG	1 cut(s)	195
BseXI	GCAGC	2 cut(s)	461, 538
BseYI	CCCAGC	1 cut(s)	145
Bsh1236I	CGCG	1 cut(s)	153
Bsh1285I	CGRYCG	2 cut(s)	127, 198
BshFI	GGCC	3 cut(s)	150, 197, 675
BshNI	GGYRCC	1 cut(s)	398
BsiEI	CGRYCG	2 cut(s)	127, 198
BsiHKCI	CYCGRG	1 cut(s)	444
BsiSI	CCGG	3 cut(s)	194, 255, 881
BslI	CCNNNNNNNGG	3 cut(s)	257, 422, 497
BsmAI	GTCTC	2 cut(s)	214, 778
BsmBI	CGTCTC	1 cut(s)	214
BsnI	GGCC	3 cut(s)	150, 197, 675
BsoBI	CYCGRG	1 cut(s)	444
Bsp119I	TTCGAA	1 cut(s)	267
Bsp143I	GATC	8 cut(s)	124, 369, 481, 511, 645, 808, 837, 1227
Bsp19I	CCATGG	1 cut(s)	1041
BspACI	CCGC	5 cut(s)	151, 153, 198, 258, 1177
BspANI	GGCC	3 cut(s)	150, 197, 675
BspCNI	CTCAG	2 cut(s)	157, 224
BspFNI	CGCG	1 cut(s)	153
BspLI	GGNNCC	4 cut(s)	189, 400, 1039, 1175
BspPI	GGATC	5 cut(s)	519, 653, 803, 845, 1235
BspQI	GCTCTTC	1 cut(s)	271
BspT104I	TTCGAA	1 cut(s)	267
BspT107I	GGYRCC	1 cut(s)	398
BspTI	CTTAAG	1 cut(s)	1109
BsrFI	RCCGGY	1 cut(s)	254
BsrI	ACTGG	3 cut(s)	645, 734, 838
BssAI	RCCGGY	1 cut(s)	254
BssECI	CCNNGG	5 cut(s)	43, 82, 151, 1041, 1145
BssMI	GATC	8 cut(s)	124, 369, 481, 511, 645, 808, 837, 1227
BssT1I	CCWWGG	1 cut(s)	1041
Bst2UI	CCWGG	4 cut(s)	396, 423, 777, 1146
Bst4CI	ACNGT	5 cut(s)	132, 346, 435, 1101, 1156
Bst6I	CTCTTC	1 cut(s)	271
BstAFI	CTTAAG	1 cut(s)	1109
BstAPI	GCANNNNNTGC	1 cut(s)	1017
BstBI	TTCGAA	1 cut(s)	267
BstC8I	GCNNGC	1 cut(s)	317
BstDEI	CTNAG	3 cut(s)	100, 165, 211
BstDSI	CCRYGG	3 cut(s)	82, 151, 1041
BstEII	GGTNACC	1 cut(s)	425
BstENI	CCTNNNNNAGG	1 cut(s)	495
BstF5I	GGATG	2 cut(s)	667, 819
BstFNI	CGCG	1 cut(s)	153
BstHHI	GCGC	1 cut(s)	924
BstKTI	GATC	8 cut(s)	127, 372, 484, 514, 648, 811, 840, 1230
BstMAI	GTCTC	2 cut(s)	214, 778
BstMBI	GATC	8 cut(s)	124, 369, 481, 511, 645, 808, 837, 1227
BstMCI	CGRYCG	2 cut(s)	127, 198
BstMWI	GCNNNNNNNGC	6 cut(s)	194, 203, 278, 449, 629, 1017
BstNI	CCWGG	4 cut(s)	396, 423, 777, 1146
BstNSI	RCATGY	1 cut(s)	1253
BstPI	GGTNACC	1 cut(s)	425
BstSCI	CCNGG	5 cut(s)	394, 421, 775, 879, 1144
BstUI	CGCG	1 cut(s)	153
BstV1I	GCAGC	2 cut(s)	461, 538
BstV2I	GAAGAC	1 cut(s)	586
BstX2I	RGATCY	2 cut(s)	511, 645
BstXI	CCANNNNNNTGG	2 cut(s)	145, 180
BstYI	RGATCY	2 cut(s)	511, 645
BstZI	CGGCCG	1 cut(s)	195
BsuRI	GGCC	3 cut(s)	150, 197, 675
BtgI	CCRYGG	3 cut(s)	82, 151, 1041
BtrI	CACGTC	1 cut(s)	392
BtsCI	GGATG	2 cut(s)	667, 819
BtsI	GCAGTG	2 cut(s)	63, 546
BtsIMutI	CAGTG	3 cut(s)	63, 342, 546
Cac8I	GCNNGC	1 cut(s)	317
CfoI	GCGC	1 cut(s)	924
Cfr10I	RCCGGY	1 cut(s)	254
Cfr13I	GGNCC	2 cut(s)	132, 148
Cfr42I	CCGCGG	1 cut(s)	154
CsiI	ACCWGGT	1 cut(s)	421
Csp6I	GTAC	2 cut(s)	731, 1205
CspCI	CAANNNNNGTGG	2 cut(s)	565, 600
CviAII	CATG	5 cut(s)	765, 991, 1008, 1042, 1250
CviQI	GTAC	2 cut(s)	731, 1205
DdeI	CTNAG	3 cut(s)	100, 165, 211
DpnI	GATC	8 cut(s)	126, 371, 483, 513, 647, 810, 839, 1229
DpnII	GATC	8 cut(s)	124, 369, 481, 511, 645, 808, 837, 1227
EaeI	YGGCCR	2 cut(s)	195, 673
EagI	CGGCCG	1 cut(s)	195
Eam1104I	CTCTTC	1 cut(s)	271
EarI	CTCTTC	1 cut(s)	271
EclXI	CGGCCG	1 cut(s)	195
Eco130I	CCWWGG	1 cut(s)	1041
Eco32I	GATATC	1 cut(s)	868
Eco47I	GGWCC	1 cut(s)	132
Eco52I	CGGCCG	1 cut(s)	195
Eco57I	CTGAAG	2 cut(s)	348, 1053
Eco88I	CYCGRG	1 cut(s)	444
Eco91I	GGTNACC	1 cut(s)	425
EcoNI	CCTNNNNNAGG	1 cut(s)	495
EcoO65I	GGTNACC	1 cut(s)	425
EcoRII	CCWGG	4 cut(s)	394, 421, 775, 1144
EcoRV	GATATC	1 cut(s)	868
EcoT14I	CCWWGG	1 cut(s)	1041
EcoT22I	ATGCAT	1 cut(s)	1013
ErhI	CCWWGG	1 cut(s)	1041
Esp3I	CGTCTC	1 cut(s)	214
FaeI	CATG	5 cut(s)	768, 994, 1011, 1045, 1253
FalI	AAGNNNNNCTT	2 cut(s)	1203, 1235
FatI	CATG	5 cut(s)	764, 990, 1007, 1041, 1249
Fnu4HI	GCNGC	5 cut(s)	151, 154, 198, 450, 552
FokI	GGATG	2 cut(s)	674, 806
Fsp4HI	GCNGC	5 cut(s)	151, 154, 198, 450, 552
FspBI	CTAG	1 cut(s)	573
GlaI	GCGC	1 cut(s)	923
GluI	GCNGC	5 cut(s)	151, 154, 198, 450, 552
GsaI	CCCAGC	1 cut(s)	149
GsuI	CTGGAG	1 cut(s)	802
HaeIII	GGCC	3 cut(s)	150, 197, 675
HapII	CCGG	3 cut(s)	194, 255, 881
HhaI	GCGC	1 cut(s)	924
Hin1II	CATG	5 cut(s)	768, 994, 1011, 1045, 1253
Hin6I	GCGC	1 cut(s)	922
HinP1I	GCGC	1 cut(s)	922
HinfI	GANTC	3 cut(s)	109, 518, 1127
HpaII	CCGG	3 cut(s)	194, 255, 881
Hpy166II	GTNNAC	2 cut(s)	135, 844
Hpy188I	TCNGA	5 cut(s)	30, 44, 121, 214, 661
Hpy188III	TCNNGA	7 cut(s)	181, 367, 464, 491, 515, 812, 863
Hpy8I	GTNNAC	2 cut(s)	135, 844
Hpy99I	CGWCG	3 cut(s)	125, 132, 818
HpyAV	CCTTC	5 cut(s)	238, 1028, 1073, 1208, 1246
HpyCH4III	ACNGT	5 cut(s)	132, 346, 435, 1101, 1156
HpyCH4IV	ACGT	1 cut(s)	391
HpyCH4V	TGCA	5 cut(s)	287, 354, 389, 623, 1011
HpyF10VI	GCNNNNNNNGC	6 cut(s)	194, 203, 278, 449, 629, 1017
HpyF3I	CTNAG	3 cut(s)	100, 165, 211
HpySE526I	ACGT	1 cut(s)	391
Hsp92II	CATG	5 cut(s)	768, 994, 1011, 1045, 1253
HspAI	GCGC	1 cut(s)	922
KspI	CCGCGG	1 cut(s)	154
Kzo9I	GATC	8 cut(s)	124, 369, 481, 511, 645, 808, 837, 1227
LguI	GCTCTTC	1 cut(s)	271
LmnI	GCTCC	3 cut(s)	193, 899, 1179
Lsp1109I	GCAGC	2 cut(s)	461, 538
LweI	GCATC	4 cut(s)	34, 193, 205, 828
MabI	ACCWGGT	1 cut(s)	421
MaeI	CTAG	1 cut(s)	573
MaeII	ACGT	1 cut(s)	391
MaeIII	GTNAC	5 cut(s)	302, 425, 692, 875, 1150
MalI	GATC	8 cut(s)	126, 371, 483, 513, 647, 810, 839, 1229
MboI	GATC	8 cut(s)	124, 369, 481, 511, 645, 808, 837, 1227
MboII	GAAGA	7 cut(s)	65, 288, 341, 586, 625, 628, 1133
MfeI	CAATTG	1 cut(s)	726
MflI	RGATCY	2 cut(s)	511, 645
MluCI	AATT	4 cut(s)	37, 726, 951, 1168
MlyI	GAGTC	1 cut(s)	1136
MmeI	TCCRAC	2 cut(s)	144, 1138
MnlI	CCTC	9 cut(s)	38, 79, 201, 230, 317, 499, 918, 1117, 1209
Mph1103I	ATGCAT	1 cut(s)	1013
MseI	TTAA	6 cut(s)	567, 852, 996, 1056, 1110, 1209
MslI	CAYNNNNRTG	1 cut(s)	140
MspA1I	CMGCKG	2 cut(s)	153, 200
MspCI	CTTAAG	1 cut(s)	1109
MspI	CCGG	3 cut(s)	194, 255, 881
MspR9I	CCNGG	5 cut(s)	396, 423, 777, 881, 1146
MunI	CAATTG	1 cut(s)	726
MvaI	CCWGG	4 cut(s)	396, 423, 777, 1146
MvnI	CGCG	1 cut(s)	153
MwoI	GCNNNNNNNGC	6 cut(s)	194, 203, 278, 449, 629, 1017
NciI	CCSGG	1 cut(s)	881
NcoI	CCATGG	1 cut(s)	1041
NdeII	GATC	8 cut(s)	124, 369, 481, 511, 645, 808, 837, 1227
NlaIII	CATG	5 cut(s)	768, 994, 1011, 1045, 1253
NlaIV	GGNNCC	4 cut(s)	189, 400, 1039, 1175
NmuCI	GTSAC	2 cut(s)	302, 875
NsiI	ATGCAT	1 cut(s)	1013
NspI	RCATGY	1 cut(s)	1253
NspV	TTCGAA	1 cut(s)	267
PaeR7I	CTCGAG	1 cut(s)	444
PciSI	GCTCTTC	1 cut(s)	271
PfeI	GAWTC	2 cut(s)	109, 518
PkrI	GCNGC	5 cut(s)	152, 155, 199, 451, 553
Ple19I	CGATCG	1 cut(s)	127
PleI	GAGTC	1 cut(s)	1135
PpsI	GAGTC	1 cut(s)	1135
Psp6I	CCWGG	4 cut(s)	394, 421, 775, 1144
PspEI	GGTNACC	1 cut(s)	425
PspFI	CCCAGC	1 cut(s)	145
PspGI	CCWGG	4 cut(s)	394, 421, 775, 1144
PspN4I	GGNNCC	4 cut(s)	189, 400, 1039, 1175
PspPI	GGNCC	2 cut(s)	132, 148
PspXI	VCTCGAGB	1 cut(s)	444
PsrI	GAACNNNNNNTAC	2 cut(s)	1188, 1220
PsuI	RGATCY	2 cut(s)	511, 645
PvuI	CGATCG	1 cut(s)	127
RsaI	GTAC	2 cut(s)	732, 1206
RsaNI	GTAC	2 cut(s)	731, 1205
RseI	CAYNNNNRTG	1 cut(s)	140
SacII	CCGCGG	1 cut(s)	154
SapI	GCTCTTC	1 cut(s)	271
SaqAI	TTAA	6 cut(s)	567, 852, 996, 1056, 1110, 1209
SatI	GCNGC	5 cut(s)	151, 154, 198, 450, 552
Sau3AI	GATC	8 cut(s)	124, 369, 481, 511, 645, 808, 837, 1227
Sau96I	GGNCC	2 cut(s)	132, 148
ScaI	AGTACT	1 cut(s)	1206
SchI	GAGTC	1 cut(s)	1136
ScrFI	CCNGG	5 cut(s)	396, 423, 777, 881, 1146
SexAI	ACCWGGT	1 cut(s)	421
SfaNI	GCATC	4 cut(s)	34, 193, 205, 828
Sfr274I	CTCGAG	1 cut(s)	444
Sfr303I	CCGCGG	1 cut(s)	154
SfuI	TTCGAA	1 cut(s)	267
SgrBI	CCGCGG	1 cut(s)	154
SinI	GGWCC	1 cut(s)	132
SlaI	CTCGAG	1 cut(s)	444
SmiMI	CAYNNNNRTG	1 cut(s)	140
SmlI	CTYRAG	4 cut(s)	310, 444, 1109, 1200
SmoI	CTYRAG	4 cut(s)	310, 444, 1109, 1200
Sse9I	AATT	4 cut(s)	37, 726, 951, 1168
SsiI	CCGC	5 cut(s)	151, 153, 198, 258, 1177
SspI	AATATT	1 cut(s)	406
SspMI	CTAG	1 cut(s)	573
StyD4I	CCNGG	5 cut(s)	394, 421, 775, 879, 1144
StyI	CCWWGG	1 cut(s)	1041
TaaI	ACNGT	5 cut(s)	132, 346, 435, 1101, 1156
TaiI	ACGT	1 cut(s)	394
TaqI	TCGA	4 cut(s)	127, 267, 366, 445
TasI	AATT	4 cut(s)	37, 726, 951, 1168
TatI	WGTACW	1 cut(s)	1204
TauI	GCSGC	3 cut(s)	153, 156, 200
TfiI	GAWTC	2 cut(s)	109, 518
Tru1I	TTAA	6 cut(s)	567, 852, 996, 1056, 1110, 1209
Tru9I	TTAA	6 cut(s)	567, 852, 996, 1056, 1110, 1209
TscAI	CASTG	3 cut(s)	70, 349, 553
TseFI	GTSAC	2 cut(s)	302, 875
TseI	GCWGC	2 cut(s)	449, 551
Tsp45I	GTSAC	2 cut(s)	302, 875
TspDTI	ATGAA	3 cut(s)	66, 453, 678
TspGWI	ACGGA	2 cut(s)	67, 71
TspRI	CASTG	3 cut(s)	70, 349, 553
Vha464I	CTTAAG	1 cut(s)	1109
VpaK11BI	GGWCC	1 cut(s)	132
XagI	CCTNNNNNAGG	1 cut(s)	495
XapI	RAATTY	1 cut(s)	37
XceI	RCATGY	1 cut(s)	1253
XcmI	CCANNNNNNNNNTGG	2 cut(s)	142, 1048
XhoI	CTCGAG	1 cut(s)	444
XspI	CTAG	1 cut(s)	573
ZrmI	AGTACT	1 cut(s)	1206
Zsp2I	ATGCAT	1 cut(s)	1013

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.