Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007235

Physical Location & Seq

Genomic Coordinates Reverse (-)

14606980 .. 14607754

Gene Structure 775 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G36980.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 462 bp

ATGGGAGAAAAGAGGAGAACTACTTCGAAAACCCTAGCTAAGAACAATAAGAGGAAAGGTCCTTATTTGCCTAATTCAATCCTGAAGATTATTGCCAATGAGAAACGTCCTTTGTATGAGTATGAAGAAGGAGTGCCTGAGGAAGAGTCTAAGAAAAACAATCGCTATGACCGCGATGAAACTGTGGAGTCAAATGATGATGACGAAGCTGAAGGTGATGATGATAGACACACACGGATGTTGCAAGGTCTCACTGGAATGCCAAGTGCTGCCTTTCAAGCGTATCCAGAGTCTGAGGGTAAAGGCCTCATCTCAGTTGAGGATCTTTTGGCGCCTCTTGAAGGAAAACCTTGGTTTAACGATCTATGTAAGAGGATCAACGGATGCGGAAAGATACTCAGTCTGTTGTTCATGCACCTCTGCATAAGCCAGAACGAGAAAGACTGGAAGGGAAAGCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000154 GO:0000447 GO:0000460 GO:0000462 GO:0000466 GO:0000469 GO:0000472 GO:0000478 GO:0000479 GO:0000480 GO:0000966 GO:0000967 GO:0001510 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0030490 GO:0030684 GO:0031167 GO:0031974 GO:0031981 GO:0032040 GO:0032259 GO:0032991 GO:0034470 GO:0034471 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

Utp14

Protein Analysis

153

Amino Acids

17.45

Weight (kDa)

5.55

Isoelectric Point (pI)

49.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007235)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02400 AT5G08600 AT5G08600 AT5G08600 AT5G36980
fragaria_vesca	FvH4_2g25830 FvH4_2g25830 FvH4_2g25830 FvH4_2g25830 FvH4_2g25830
malus_domestica	MD03G1289000.v1.1 MD11G1308900.v1.1
prunus_persica	Prupe.8G262300_v2.0.a1 Prupe.8G262300_v2.0.a1
pyrus_communis	pycom03g22910
rosa_chinensis	RchiOBHm_Chr6g0294141
rosa_laevigata	RLG00000011895
rosa_multiflora	Rmu_sc0005037.1_g000007
rosa_roxburghii	Rroxscaffold_7G00173610
rosa_rugosa	Rorug06G0241800
rosa_samantha	Rh6AG354200 Rh6BG361100 Rh6CG368400 Rh6DG355200
rosa_wichuraiana	Rw6G030870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	331
AccII	CGCG	1 cut(s)	174
AciI	CCGC	2 cut(s)	172, 387
AclWI	GGATC	2 cut(s)	330, 383
AcuI	CTGAAG	2 cut(s)	104, 231
AcyI	GRCGYC	1 cut(s)	332
AfiI	CCNNNNNNNGG	1 cut(s)	341
AgsI	TTSAA	3 cut(s)	78, 278, 341
AluBI	AGCT	3 cut(s)	38, 209, 457
AluI	AGCT	3 cut(s)	38, 209, 457
Alw26I	GTCTC	1 cut(s)	254
AlwI	GGATC	2 cut(s)	330, 383
AlwNI	CAGNNNCTG	1 cut(s)	293
AoxI	GGCC	1 cut(s)	304
ApeKI	GCWGC	1 cut(s)	269
Asp700I	GAANNNNTTC	1 cut(s)	22
AspLEI	GCGC	1 cut(s)	334
AspS9I	GGNCC	1 cut(s)	59
AsuHPI	GGTGA	1 cut(s)	227
AsuII	TTCGAA	1 cut(s)	26
AvaII	GGWCC	1 cut(s)	59
AxyI	CCTNAGG	1 cut(s)	138
BanI	GGYRCC	1 cut(s)	331
BbvI	GCAGC	1 cut(s)	256
BciVI	GTATCC	1 cut(s)	294
BcoDI	GTCTC	1 cut(s)	254
BfaI	CTAG	1 cut(s)	35
BfoI	RGCGCY	1 cut(s)	335
BfuI	GTATCC	1 cut(s)	294
BisI	GCNGC	1 cut(s)	270
BlsI	GCNGC	1 cut(s)	271
Bme18I	GGWCC	1 cut(s)	59
BmgT120I	GGNCC	1 cut(s)	59
BmiI	GGNNCC	1 cut(s)	333
BmsI	GCATC	1 cut(s)	374
Bpu14I	TTCGAA	1 cut(s)	26
BsaHI	GRCGYC	1 cut(s)	332
BsaI	GGTCTC	1 cut(s)	254
BsaJI	CCNNGG	1 cut(s)	350
Bsc4I	CCNNNNNNNGG	1 cut(s)	341
Bse1I	ACTGG	2 cut(s)	259, 449
Bse21I	CCTNAGG	1 cut(s)	138
BseDI	CCNNGG	1 cut(s)	350
BseGI	GGATG	2 cut(s)	243, 389
BseLI	CCNNNNNNNGG	1 cut(s)	341
BseMII	CTCAG	4 cut(s)	129, 285, 327, 412
BseNI	ACTGG	2 cut(s)	259, 449
BseRI	GAGGAG	1 cut(s)	28
BseXI	GCAGC	1 cut(s)	256
Bsh1236I	CGCG	1 cut(s)	174
BshFI	GGCC	1 cut(s)	306
BshNI	GGYRCC	1 cut(s)	331
BslI	CCNNNNNNNGG	1 cut(s)	341
BsmAI	GTCTC	1 cut(s)	254
BsmI	GAATGC	1 cut(s)	264
BsnI	GGCC	1 cut(s)	306
Bso31I	GGTCTC	1 cut(s)	254
Bsp119I	TTCGAA	1 cut(s)	26
Bsp143I	GATC	3 cut(s)	322, 361, 375
BspACI	CCGC	2 cut(s)	172, 387
BspANI	GGCC	1 cut(s)	306
BspCNI	CTCAG	4 cut(s)	130, 286, 326, 411
BspFNI	CGCG	1 cut(s)	174
BspLI	GGNNCC	1 cut(s)	333
BspPI	GGATC	2 cut(s)	330, 383
BspT104I	TTCGAA	1 cut(s)	26
BspT107I	GGYRCC	1 cut(s)	331
BspTNI	GGTCTC	1 cut(s)	254
BsrI	ACTGG	2 cut(s)	259, 449
BssECI	CCNNGG	1 cut(s)	350
BssMI	GATC	3 cut(s)	322, 361, 375
BssNI	GRCGYC	1 cut(s)	332
BssT1I	CCWWGG	1 cut(s)	350
Bst4CI	ACNGT	1 cut(s)	184
Bst6I	CTCTTC	1 cut(s)	138
BstACI	GRCGYC	1 cut(s)	332
BstBI	TTCGAA	1 cut(s)	26
BstDEI	CTNAG	6 cut(s)	39, 138, 150, 294, 313, 398
BstENI	CCTNNNNNAGG	1 cut(s)	339
BstF5I	GGATG	2 cut(s)	243, 389
BstFNI	CGCG	1 cut(s)	174
BstH2I	RGCGCY	1 cut(s)	335
BstHHI	GCGC	1 cut(s)	334
BstKTI	GATC	3 cut(s)	325, 364, 378
BstMAI	GTCTC	1 cut(s)	254
BstMBI	GATC	3 cut(s)	322, 361, 375
BstMWI	GCNNNNNNNGC	2 cut(s)	171, 278
BstUI	CGCG	1 cut(s)	174
BstV1I	GCAGC	1 cut(s)	256
BstX2I	RGATCY	1 cut(s)	322
BstYI	RGATCY	1 cut(s)	322
Bsu36I	CCTNAGG	1 cut(s)	138
BsuI	GTATCC	1 cut(s)	294
BsuRI	GGCC	1 cut(s)	306
BtgZI	GCGATG	1 cut(s)	189
BtsCI	GGATG	2 cut(s)	243, 389
BtsIMutI	CAGTG	1 cut(s)	252
CaiI	CAGNNNCTG	1 cut(s)	293
CfoI	GCGC	1 cut(s)	334
Cfr13I	GGNCC	1 cut(s)	59
CviAII	CATG	1 cut(s)	412
CviJI	RGCY	5 cut(s)	38, 209, 306, 429, 457
CviKI_1	RGCY	5 cut(s)	38, 209, 306, 429, 457
DdeI	CTNAG	6 cut(s)	39, 138, 150, 294, 313, 398
DinI	GGCGCC	1 cut(s)	333
DpnI	GATC	3 cut(s)	324, 363, 377
DpnII	GATC	3 cut(s)	322, 361, 375
Eam1104I	CTCTTC	1 cut(s)	138
EarI	CTCTTC	1 cut(s)	138
Eco130I	CCWWGG	1 cut(s)	350
Eco147I	AGGCCT	1 cut(s)	306
Eco31I	GGTCTC	1 cut(s)	254
Eco47I	GGWCC	1 cut(s)	59
Eco57I	CTGAAG	2 cut(s)	104, 231
Eco81I	CCTNAGG	1 cut(s)	138
EcoNI	CCTNNNNNAGG	1 cut(s)	339
EcoO109I	RGGNCCY	1 cut(s)	59
EcoT14I	CCWWGG	1 cut(s)	350
EgeI	GGCGCC	1 cut(s)	333
EheI	GGCGCC	1 cut(s)	333
ErhI	CCWWGG	1 cut(s)	350
FaeI	CATG	1 cut(s)	415
FaiI	YATR	6 cut(s)	117, 123, 168, 367, 413, 425
FatI	CATG	1 cut(s)	411
Fnu4HI	GCNGC	1 cut(s)	270
FokI	GGATG	2 cut(s)	250, 396
Fsp4HI	GCNGC	1 cut(s)	270
FspBI	CTAG	1 cut(s)	35
GlaI	GCGC	1 cut(s)	333
GluI	GCNGC	1 cut(s)	270
HaeII	RGCGCY	1 cut(s)	335
HaeIII	GGCC	1 cut(s)	306
HhaI	GCGC	1 cut(s)	334
Hin1I	GRCGYC	1 cut(s)	332
Hin1II	CATG	1 cut(s)	415
Hin6I	GCGC	1 cut(s)	332
HinP1I	GCGC	1 cut(s)	332
HinfI	GANTC	3 cut(s)	146, 188, 290
HphI	GGTGA	1 cut(s)	227
Hpy188I	TCNGA	1 cut(s)	295
Hpy188III	TCNNGA	3 cut(s)	82, 287, 338
HpyAV	CCTTC	4 cut(s)	122, 206, 335, 442
HpyCH4III	ACNGT	1 cut(s)	184
HpyCH4IV	ACGT	1 cut(s)	106
HpyCH4V	TGCA	3 cut(s)	244, 415, 423
HpyF10VI	GCNNNNNNNGC	2 cut(s)	171, 278
HpyF3I	CTNAG	6 cut(s)	39, 138, 150, 294, 313, 398
HpySE526I	ACGT	1 cut(s)	106
Hsp92I	GRCGYC	1 cut(s)	332
Hsp92II	CATG	1 cut(s)	415
HspAI	GCGC	1 cut(s)	332
KasI	GGCGCC	1 cut(s)	331
Kzo9I	GATC	3 cut(s)	322, 361, 375
LpnPI	CCDG	6 cut(s)	95, 150, 240, 300, 430, 443
Lsp1109I	GCAGC	1 cut(s)	256
LweI	GCATC	1 cut(s)	374
MaeI	CTAG	1 cut(s)	35
MaeII	ACGT	1 cut(s)	106
MalI	GATC	3 cut(s)	324, 363, 377
MboI	GATC	3 cut(s)	322, 361, 375
MboII	GAAGA	3 cut(s)	97, 137, 155
MflI	RGATCY	1 cut(s)	322
MluCI	AATT	1 cut(s)	73
Mly113I	GGCGCC	1 cut(s)	332
MlyI	GAGTC	3 cut(s)	155, 197, 299
MnlI	CCTC	9 cut(s)	6, 45, 133, 289, 313, 317, 345, 366, 428
MroXI	GAANNNNTTC	1 cut(s)	22
MseI	TTAA	1 cut(s)	357
MslI	CAYNNNNRTG	2 cut(s)	236, 257
Mva1269I	GAATGC	1 cut(s)	264
MvnI	CGCG	1 cut(s)	174
MwoI	GCNNNNNNNGC	2 cut(s)	171, 278
NarI	GGCGCC	1 cut(s)	332
NdeII	GATC	3 cut(s)	322, 361, 375
NlaIII	CATG	1 cut(s)	415
NlaIV	GGNNCC	1 cut(s)	333
NspV	TTCGAA	1 cut(s)	26
PceI	AGGCCT	1 cut(s)	306
PctI	GAATGC	1 cut(s)	264
PdmI	GAANNNNTTC	1 cut(s)	22
PkrI	GCNGC	1 cut(s)	271
PleI	GAGTC	3 cut(s)	154, 196, 298
PluTI	GGCGCC	1 cut(s)	335
PpsI	GAGTC	3 cut(s)	154, 196, 298
PpuMI	RGGWCCY	1 cut(s)	59
Psp5II	RGGWCCY	1 cut(s)	59
PspN4I	GGNNCC	1 cut(s)	333
PspPI	GGNCC	1 cut(s)	59
PspPPI	RGGWCCY	1 cut(s)	59
PstNI	CAGNNNCTG	1 cut(s)	293
PsuI	RGATCY	1 cut(s)	322
RseI	CAYNNNNRTG	2 cut(s)	236, 257
SaqAI	TTAA	1 cut(s)	357
SatI	GCNGC	1 cut(s)	270
Sau3AI	GATC	3 cut(s)	322, 361, 375
Sau96I	GGNCC	1 cut(s)	59
SchI	GAGTC	3 cut(s)	155, 197, 299
SetI	ASST	9 cut(s)	40, 61, 109, 211, 217, 250, 352, 420, 459
SfaNI	GCATC	1 cut(s)	374
SfoI	GGCGCC	1 cut(s)	333
SfuI	TTCGAA	1 cut(s)	26
SinI	GGWCC	1 cut(s)	59
SmiMI	CAYNNNNRTG	2 cut(s)	236, 257
Sse9I	AATT	1 cut(s)	73
SseBI	AGGCCT	1 cut(s)	306
SsiI	CCGC	2 cut(s)	172, 387
SspDI	GGCGCC	1 cut(s)	331
SspMI	CTAG	1 cut(s)	35
StuI	AGGCCT	1 cut(s)	306
StyI	CCWWGG	1 cut(s)	350
TaaI	ACNGT	1 cut(s)	184
TaiI	ACGT	1 cut(s)	109
TaqI	TCGA	1 cut(s)	26
TasI	AATT	1 cut(s)	73
Tru1I	TTAA	1 cut(s)	357
Tru9I	TTAA	1 cut(s)	357
TscAI	CASTG	1 cut(s)	259
TseI	GCWGC	1 cut(s)	269
TspDTI	ATGAA	3 cut(s)	138, 192, 400
TspGWI	ACGGA	2 cut(s)	250, 396
TspRI	CASTG	1 cut(s)	259
VpaK11BI	GGWCC	1 cut(s)	59
XagI	CCTNNNNNAGG	1 cut(s)	339
XmnI	GAANNNNTTC	1 cut(s)	22
XspI	CTAG	1 cut(s)	35

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.