Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0007235

Physical Location & Seq

Genomic Coordinates Reverse (-)

59132774 .. 59137975

Gene Structure 5202 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG361100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1851 bp

ATGGCAGAGACCAAGCGAAAAACCAGAGACGACGGAAGTAGACAGCGGAGCAGCAGCAAGAAGCCGAAAACCAGCAAGAAAGGCAAGAGCGCCGATAAGGCAGAAAGAAAAGGCCCTCGCTTGCCCAACGCTCTGCGGAAGGAGCTCGACCGCTTAAACCCTAGAACCGCCGACTCCGACGAAGAGATTGGCTCCGATGAAGAGGCTTTGGGCCAGGACCTGTATGAGTATGAAGAGGGACTGCCGGAGGAGGAGTCCAAGAAGAACCGCCGGTTCGACCCCGTCGATAACCTCGATTATGAGCTACCTGAGGACTTCGAGGATGAGAATGTGTCATCAGATGATGACAATGAGGCCAGGAACGGTGGAGAGAGTGAGGCGGAGGACCAGGTTAAAGAGGAAAATGATGGAAGCAGAATCAGAGAAATGCCGACCGAGACTTTTGAAGGGAGGAGGAAGAAGATAAACAATGTTGTGGTATCGGAGGCATATCCCGAGTCCGAGTATAACCCTACTCGTGATATGTTGGAGGGTGAAGGAGCACTTAGCATCGGAGACCTTCTGGACCCTCTCCAAGGGAAACATGGTTATAGCAAACTTAAGAAGAGAGTACGTATTCTGGATAAGAAATCTACACCCATTCAAGCTCCACTTCCCAAGCCTGTGCAGCAGAGATTGGAGAGGAATGCAGCATATGACAAATCAAAGGAAGAGTTAAGAAAGTGGGAGCCAATCGTAAAGAGGAATAGGGAGGCGCCTACCATATACTTTGATGATGATAGGGATCTAGGGCCTTCATCCGTGGGAACAATAGCATCTGAATTTGAACCTCGAACTGAGTTCGAGAAGAAAATGGCTTCATTACTTTATGATGACGAGGTTATGGATGCTCACAGAAAAGATGGTTCAAGGCTCCTTGAATTAAATAAGGTATCTGCTGAAGATGAAAAGGACCGCCAGAATCGAATCGCCAAAATGCGCAGCCTTCTGTTCCGGCATGAGTTGAAGTCAAAACACATAAAAAACATTAAATCCAAAACCTATCATCGTTTGTTGAAGAAGGATAAATTGAAGGCGAACTCTTTACAAAGTCAAATGGATCCAGAAGCTTCTAAAGAACTTGCAATGAAGCAAGAGTATGAACGAGCAAAGGAACGGATGACTCTGAGGCACAAAGGCAGCTCTAAGTGGGCAAAGCGCATAAAAGAGCGTGGTCTAGATGTCCAAGATGATGGTACTCGAGCTGCTATAGCTGAACAGCAGCACCTGCATGCTCAGCTGACAAGAAAAATGAATTCGATGAAAGATAGTGACACCAGCAGTAATGACACTAGTGATGATGATGATGTGGATGTTAGCTCAGACGACGAGGGTAGGGCATCAAAGTTGTTAGAAAAAGCAAAGGAGAAGACACTTAAACTGTTAAATGAAGATAATGAAGTTCCAAACTCAGGAGTGCTTAGTTTACCTTTCATGGAACGTGCATCTAAAAAAAAAAATGAGGCAGCTGCTGGAGAAGCTAAACTTGCTCTTCAAGAGTATGAATCATGGGCAAATCAATTGGGGGATTCAGGTGGGGGCAAAAATCCGAAAGTAGGCCGTCCGAGTGGGAGAATGGTCTTCAATGGAAAGGAGGCTCCTGAATCAAGTAAGAAGACTAAATCAGATAACAAGAATAGATCAGATAATTATTACGGTGATAGTGATAGTGAAGACGACTTGGAACCCATCAGTATTTCCCCTGTTGGGAAATACAGAAGTAATGAATTAATGAAGGATGCCAACAGTTCTCCTGTTTTACTTCATGAAGATTCTGAAAATCATAAGGATTCTTTTTTCAAGGTGATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000154 GO:0000447 GO:0000460 GO:0000462 GO:0000466 GO:0000469 GO:0000472 GO:0000478 GO:0000479 GO:0000480 GO:0000966 GO:0000967 GO:0001510 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0030490 GO:0030684 GO:0031167 GO:0031974 GO:0031981 GO:0032040 GO:0032259 GO:0032991 GO:0034470 GO:0034471 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

Utp14

Protein Analysis

616

Amino Acids

70.06

Weight (kDa)

5.73

Isoelectric Point (pI)

47.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Utp14	PF04615	144 - 574	3.2e-107	Utp14 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0007235)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02400 AT5G08600 AT5G08600 AT5G08600 AT5G36980
fragaria_vesca	FvH4_2g25830 FvH4_2g25830 FvH4_2g25830 FvH4_2g25830 FvH4_2g25830
malus_domestica	MD03G1289000.v1.1 MD11G1308900.v1.1
prunus_persica	Prupe.8G262300_v2.0.a1 Prupe.8G262300_v2.0.a1
pyrus_communis	pycom03g22910
rosa_chinensis	RchiOBHm_Chr6g0294141
rosa_laevigata	RLG00000011895
rosa_multiflora	Rmu_sc0005037.1_g000007
rosa_roxburghii	Rroxscaffold_7G00173610
rosa_rugosa	Rorug06G0241800
rosa_samantha	Rh6AG354200 Rh6BG361100 Rh6CG368400 Rh6DG355200
rosa_wichuraiana	Rw6G030870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1275
Acc16I	TGCGCA	1 cut(s)	980
Acc36I	ACCTGC	1 cut(s)	1275
AccB1I	GGYRCC	1 cut(s)	754
AccI	GTMKAC	1 cut(s)	40
AciI	CCGC	7 cut(s)	46, 136, 151, 168, 268, 380, 955
AclWI	GGATC	3 cut(s)	792, 1094, 1107
AcsI	RAATTY	2 cut(s)	821, 1294
AcuI	CTGAAG	1 cut(s)	960
AcyI	GRCGYC	1 cut(s)	755
AfaI	GTAC	2 cut(s)	612, 1237
AfiI	CCNNNNNNNGG	4 cut(s)	575, 1451, 1595, 1746
AflII	CTTAAG	1 cut(s)	599
AhlI	ACTAGT	1 cut(s)	1331
AjnI	CCWGG	3 cut(s)	213, 356, 387
Alw21I	GWGCWC	2 cut(s)	147, 544
Alw26I	GTCTC	4 cut(s)	2, 21, 431, 549
AlwI	GGATC	3 cut(s)	792, 1094, 1107
AlwNI	CAGNNNCTG	3 cut(s)	220, 1267, 1511
Ama87I	CYCGRG	2 cut(s)	494, 1239
AoxI	GGCC	5 cut(s)	112, 211, 354, 791, 1597
ApoI	RAATTY	2 cut(s)	821, 1294
AseI	ATTAAT	1 cut(s)	1769
AspLEI	GCGC	4 cut(s)	92, 757, 981, 1200
AspS9I	GGNCC	7 cut(s)	113, 211, 217, 385, 565, 791, 952
AsuHPI	GGTGA	2 cut(s)	545, 1709
AvaI	CYCGRG	2 cut(s)	494, 1239
AvaII	GGWCC	4 cut(s)	217, 385, 565, 952
AxyI	CCTNAGG	1 cut(s)	309
BamHI	GGATCC	1 cut(s)	1099
BanI	GGYRCC	1 cut(s)	754
BanII	GRGCYC	1 cut(s)	147
BauI	CACGAG	1 cut(s)	516
BbsI	GAAGAC	4 cut(s)	1415, 1612, 1661, 1719
Bbv12I	GWGCWC	2 cut(s)	147, 544
BccI	CCATC	4 cut(s)	401, 896, 1226, 1736
BceAI	ACGGC	1 cut(s)	1584
BciT130I	CCWGG	3 cut(s)	215, 358, 389
BcoDI	GTCTC	4 cut(s)	2, 21, 431, 549
BcuI	ACTAGT	1 cut(s)	1331
BfaI	CTAG	4 cut(s)	162, 788, 1217, 1332
BfmI	CTRYAG	1 cut(s)	1248
BfoI	RGCGCY	2 cut(s)	93, 758
BfrI	CTTAAG	1 cut(s)	599
BfuAI	ACCTGC	1 cut(s)	1275
BglI	GCCNNNNNGGC	1 cut(s)	98
BlpI	GCTNAGC	1 cut(s)	1275
Bme1390I	CCNGG	3 cut(s)	215, 358, 389
Bme18I	GGWCC	4 cut(s)	217, 385, 565, 952
BmeT110I	CYCGRG	2 cut(s)	494, 1239
BmgT120I	GGNCC	7 cut(s)	113, 211, 217, 385, 565, 791, 952
BmiI	GGNNCC	8 cut(s)	193, 567, 729, 756, 914, 1101, 1638, 1725
BmrFI	CCNGG	3 cut(s)	215, 358, 389
BmsI	GCATC	6 cut(s)	558, 824, 877, 1388, 1493, 1768
BpiI	GAAGAC	4 cut(s)	1415, 1612, 1661, 1719
BplI	GAGNNNNNCTC	2 cut(s)	176, 208
BpmI	CTGGAG	1 cut(s)	1533
Bpu1102I	GCTNAGC	1 cut(s)	1275
BsaAI	YACGTR	1 cut(s)	614
BsaBI	GATNNNNATC	1 cut(s)	783
BsaHI	GRCGYC	1 cut(s)	755
BsaI	GGTCTC	2 cut(s)	2, 549
BsaJI	CCNNGG	2 cut(s)	574, 801
BsaXI	ACNNNNNCTCC	2 cut(s)	239, 269
Bsc4I	CCNNNNNNNGG	4 cut(s)	575, 1451, 1595, 1746
Bse118I	RCCGGY	1 cut(s)	270
Bse21I	CCTNAGG	1 cut(s)	309
Bse3DI	GCAATG	1 cut(s)	1131
Bse8I	GATNNNNATC	1 cut(s)	783
BseBI	CCWGG	3 cut(s)	215, 358, 389
BseDI	CCNNGG	2 cut(s)	574, 801
BseGI	GGATG	6 cut(s)	328, 797, 892, 1164, 1357, 1783
BseJI	GATNNNNATC	1 cut(s)	783
BseLI	CCNNNNNNNGG	4 cut(s)	575, 1451, 1595, 1746
BseMI	GCAATG	1 cut(s)	1131
BseMII	CTCAG	6 cut(s)	300, 828, 1157, 1289, 1374, 1464
BseRI	GAGGAG	3 cut(s)	263, 266, 466
BsgI	GTGCAG	1 cut(s)	686
Bsh1285I	CGRYCG	2 cut(s)	151, 435
BshFI	GGCC	5 cut(s)	114, 213, 356, 793, 1599
BshNI	GGYRCC	1 cut(s)	754
BsiEI	CGRYCG	2 cut(s)	151, 435
BsiHKAI	GWGCWC	2 cut(s)	147, 544
BsiHKCI	CYCGRG	2 cut(s)	494, 1239
BsiSI	CCGG	3 cut(s)	245, 271, 994
BslFI	GGGAC	1 cut(s)	252
BslI	CCNNNNNNNGG	4 cut(s)	575, 1451, 1595, 1746
BsmAI	GTCTC	4 cut(s)	2, 21, 431, 549
BsmBI	CGTCTC	1 cut(s)	21
BsmFI	GGGAC	1 cut(s)	252
BsmI	GAATGC	1 cut(s)	691
BsnI	GGCC	5 cut(s)	114, 213, 356, 793, 1599
Bso31I	GGTCTC	2 cut(s)	2, 549
BsoBI	CYCGRG	2 cut(s)	494, 1239
Bsp1286I	GDGCHC	2 cut(s)	147, 544
Bsp143I	GATC	3 cut(s)	784, 1099, 1679
Bsp1720I	GCTNAGC	1 cut(s)	1275
BspACI	CCGC	7 cut(s)	46, 136, 151, 168, 268, 380, 955
BspANI	GGCC	5 cut(s)	114, 213, 356, 793, 1599
BspCNI	CTCAG	6 cut(s)	301, 829, 1158, 1288, 1373, 1463
BspHI	TCATGA	1 cut(s)	1804
BspLI	GGNNCC	8 cut(s)	193, 567, 729, 756, 914, 1101, 1638, 1725
BspMI	ACCTGC	1 cut(s)	1275
BspPI	GGATC	3 cut(s)	792, 1094, 1107
BspQI	GCTCTTC	1 cut(s)	1536
BspT107I	GGYRCC	1 cut(s)	754
BspTI	CTTAAG	1 cut(s)	599
BspTNI	GGTCTC	2 cut(s)	2, 549
BsrDI	GCAATG	1 cut(s)	1131
BsrFI	RCCGGY	1 cut(s)	270
BssAI	RCCGGY	1 cut(s)	270
BssECI	CCNNGG	2 cut(s)	574, 801
BssMI	GATC	3 cut(s)	784, 1099, 1679
BssNI	GRCGYC	1 cut(s)	755
BssSI	CACGAG	1 cut(s)	516
BssT1I	CCWWGG	1 cut(s)	574
Bst2BI	CACGAG	1 cut(s)	516
Bst2UI	CCWGG	3 cut(s)	215, 358, 389
Bst4CI	ACNGT	4 cut(s)	365, 1422, 1697, 1787
Bst6I	CTCTTC	6 cut(s)	177, 195, 228, 599, 705, 1536
BstACI	GRCGYC	1 cut(s)	755
BstAFI	CTTAAG	1 cut(s)	599
BstAPI	GCANNNNNTGC	1 cut(s)	1267
BstBAI	YACGTR	1 cut(s)	614
BstC8I	GCNNGC	2 cut(s)	122, 1272
BstDEI	CTNAG	9 cut(s)	309, 545, 837, 1166, 1185, 1275, 1360, 1450, 1460
BstDSI	CCRYGG	1 cut(s)	801
BstENI	CCTNNNNNAGG	1 cut(s)	573
BstF5I	GGATG	6 cut(s)	328, 797, 892, 1164, 1357, 1783
BstH2I	RGCGCY	2 cut(s)	93, 758
BstHHI	GCGC	4 cut(s)	92, 757, 981, 1200
BstKTI	GATC	3 cut(s)	787, 1102, 1682
BstMAI	GTCTC	4 cut(s)	2, 21, 431, 549
BstMBI	GATC	3 cut(s)	784, 1099, 1679
BstMCI	CGRYCG	2 cut(s)	151, 435
BstMWI	GCNNNNNNNGC	9 cut(s)	81, 98, 142, 667, 1250, 1267, 1276, 1517, 1526
BstNI	CCWGG	3 cut(s)	215, 358, 389
BstNSI	RCATGY	1 cut(s)	1274
BstSCI	CCNGG	3 cut(s)	213, 356, 387
BstSFI	CTRYAG	1 cut(s)	1248
BstSNI	TACGTA	1 cut(s)	614
BstV2I	GAAGAC	4 cut(s)	1415, 1612, 1661, 1719
BstX2I	RGATCY	2 cut(s)	784, 1099
BstXI	CCANNNNNNTGG	1 cut(s)	1232
BstYI	RGATCY	2 cut(s)	784, 1099
Bsu36I	CCTNAGG	1 cut(s)	309
BsuRI	GGCC	5 cut(s)	114, 213, 356, 793, 1599
BtgI	CCRYGG	1 cut(s)	801
BtsCI	GGATG	6 cut(s)	328, 797, 892, 1164, 1357, 1783
BveI	ACCTGC	1 cut(s)	1275
Cac8I	GCNNGC	2 cut(s)	122, 1272
CaiI	CAGNNNCTG	3 cut(s)	220, 1267, 1511
CciI	TCATGA	1 cut(s)	1804
CfoI	GCGC	4 cut(s)	92, 757, 981, 1200
Cfr10I	RCCGGY	1 cut(s)	270
Cfr13I	GGNCC	7 cut(s)	113, 211, 217, 385, 565, 791, 952
CsiI	ACCWGGT	1 cut(s)	387
Csp6I	GTAC	2 cut(s)	611, 1236
CviAII	CATG	6 cut(s)	584, 998, 1271, 1474, 1548, 1805
CviQI	GTAC	2 cut(s)	611, 1236
DdeI	CTNAG	9 cut(s)	309, 545, 837, 1166, 1185, 1275, 1360, 1450, 1460
DinI	GGCGCC	1 cut(s)	756
DpnI	GATC	3 cut(s)	786, 1101, 1681
DpnII	GATC	3 cut(s)	784, 1099, 1679
Eam1104I	CTCTTC	6 cut(s)	177, 195, 228, 599, 705, 1536
EarI	CTCTTC	6 cut(s)	177, 195, 228, 599, 705, 1536
EciI	GGCGGA	1 cut(s)	395
Ecl136II	GAGCTC	1 cut(s)	145
Eco105I	TACGTA	1 cut(s)	614
Eco130I	CCWWGG	1 cut(s)	574
Eco24I	GRGCYC	1 cut(s)	147
Eco31I	GGTCTC	2 cut(s)	2, 549
Eco47I	GGWCC	4 cut(s)	217, 385, 565, 952
Eco53kI	GAGCTC	1 cut(s)	145
Eco57I	CTGAAG	1 cut(s)	960
Eco81I	CCTNAGG	1 cut(s)	309
Eco88I	CYCGRG	2 cut(s)	494, 1239
EcoICRI	GAGCTC	1 cut(s)	145
EcoNI	CCTNNNNNAGG	1 cut(s)	573
EcoO109I	RGGNCCY	3 cut(s)	113, 217, 791
EcoRI	GAATTC	1 cut(s)	1294
EcoRII	CCWGG	3 cut(s)	213, 356, 387
EcoT14I	CCWWGG	1 cut(s)	574
EcoT38I	GRGCYC	1 cut(s)	147
EgeI	GGCGCC	1 cut(s)	756
EheI	GGCGCC	1 cut(s)	756
ErhI	CCWWGG	1 cut(s)	574
Esp3I	CGTCTC	1 cut(s)	21
FaeI	CATG	6 cut(s)	587, 1001, 1274, 1477, 1551, 1808
FalI	AAGNNNNNCTT	6 cut(s)	528, 560, 636, 668, 1509, 1541
FaqI	GGGAC	1 cut(s)	252
FatI	CATG	6 cut(s)	583, 997, 1270, 1473, 1547, 1804
FauNDI	CATATG	1 cut(s)	694
FblI	GTMKAC	1 cut(s)	40
FokI	GGATG	6 cut(s)	335, 784, 899, 1171, 1364, 1790
FriOI	GRGCYC	1 cut(s)	147
FspBI	CTAG	4 cut(s)	162, 788, 1217, 1332
FspI	TGCGCA	1 cut(s)	980
GlaI	GCGC	4 cut(s)	91, 756, 980, 1199
GsuI	CTGGAG	1 cut(s)	1533
HaeII	RGCGCY	2 cut(s)	93, 758
HaeIII	GGCC	5 cut(s)	114, 213, 356, 793, 1599
HapII	CCGG	3 cut(s)	245, 271, 994
HhaI	GCGC	4 cut(s)	92, 757, 981, 1200
Hin1I	GRCGYC	1 cut(s)	755
Hin1II	CATG	6 cut(s)	587, 1001, 1274, 1477, 1551, 1808
Hin6I	GCGC	4 cut(s)	90, 755, 979, 1198
HinP1I	GCGC	4 cut(s)	90, 755, 979, 1198
HindIII	AAGCTT	1 cut(s)	1107
HpaII	CCGG	3 cut(s)	245, 271, 994
HphI	GGTGA	2 cut(s)	545, 1709
Hpy166II	GTNNAC	2 cut(s)	41, 1466
Hpy8I	GTNNAC	2 cut(s)	41, 1466
Hpy99I	CGWCG	4 cut(s)	35, 182, 287, 1370
HpyAV	CCTTC	9 cut(s)	133, 440, 530, 569, 804, 995, 1054, 1066, 1768
HpyCH4III	ACNGT	4 cut(s)	365, 1422, 1697, 1787
HpyCH4IV	ACGT	2 cut(s)	613, 1480
HpyCH4V	TGCA	5 cut(s)	667, 689, 1124, 1270, 1484
HpyF10VI	GCNNNNNNNGC	9 cut(s)	81, 98, 142, 667, 1250, 1267, 1276, 1517, 1526
HpyF3I	CTNAG	9 cut(s)	309, 545, 837, 1166, 1185, 1275, 1360, 1450, 1460
HpySE526I	ACGT	2 cut(s)	613, 1480
Hsp92I	GRCGYC	1 cut(s)	755
Hsp92II	CATG	6 cut(s)	587, 1001, 1274, 1477, 1551, 1808
HspAI	GCGC	4 cut(s)	90, 755, 979, 1198
KasI	GGCGCC	1 cut(s)	754
Kzo9I	GATC	3 cut(s)	784, 1099, 1679
LguI	GCTCTTC	1 cut(s)	1536
LmnI	GCTCC	8 cut(s)	48, 142, 197, 539, 652, 727, 918, 1642
LweI	GCATC	6 cut(s)	558, 824, 877, 1388, 1493, 1768
MabI	ACCWGGT	1 cut(s)	387
MaeI	CTAG	4 cut(s)	162, 788, 1217, 1332
MaeII	ACGT	2 cut(s)	613, 1480
MaeIII	GTNAC	1 cut(s)	1310
MalI	GATC	3 cut(s)	786, 1101, 1681
MboI	GATC	3 cut(s)	784, 1099, 1679
MfeI	CAATTG	1 cut(s)	1559
MflI	RGATCY	2 cut(s)	784, 1099
MhlI	GDGCHC	2 cut(s)	147, 544
MluCI	AATT	7 cut(s)	821, 920, 1067, 1294, 1559, 1687, 1766
Mly113I	GGCGCC	1 cut(s)	755
MlyI	GAGTC	4 cut(s)	167, 263, 506, 1156
MmeI	TCCRAC	2 cut(s)	201, 507
MseI	TTAA	9 cut(s)	155, 393, 600, 716, 923, 1029, 1416, 1424, 1769
MslI	CAYNNNNRTG	1 cut(s)	1269
MspA1I	CMGCKG	3 cut(s)	46, 1279, 1508
MspCI	CTTAAG	1 cut(s)	599
MspI	CCGG	3 cut(s)	245, 271, 994
MspR9I	CCNGG	3 cut(s)	215, 358, 389
MunI	CAATTG	1 cut(s)	1559
Mva1269I	GAATGC	1 cut(s)	691
MvaI	CCWGG	3 cut(s)	215, 358, 389
MwoI	GCNNNNNNNGC	9 cut(s)	81, 98, 142, 667, 1250, 1267, 1276, 1517, 1526
NarI	GGCGCC	1 cut(s)	755
NdeI	CATATG	1 cut(s)	694
NdeII	GATC	3 cut(s)	784, 1099, 1679
NlaIII	CATG	6 cut(s)	587, 1001, 1274, 1477, 1551, 1808
NlaIV	GGNNCC	8 cut(s)	193, 567, 729, 756, 914, 1101, 1638, 1725
NmuCI	GTSAC	1 cut(s)	1310
NsbI	TGCGCA	1 cut(s)	980
NspI	RCATGY	1 cut(s)	1274
PaeI	GCATGC	1 cut(s)	1274
PaeR7I	CTCGAG	1 cut(s)	1239
PagI	TCATGA	1 cut(s)	1804
PaqCI	CACCTGC	1 cut(s)	1275
PciSI	GCTCTTC	1 cut(s)	1536
PcsI	WCGNNNNNNNCGW	2 cut(s)	282, 291
PctI	GAATGC	1 cut(s)	691
PfeI	GAWTC	8 cut(s)	417, 961, 966, 1544, 1568, 1643, 1811, 1829
PflFI	GACNNNGTC	1 cut(s)	281
PleI	GAGTC	4 cut(s)	167, 262, 505, 1156
PluTI	GGCGCC	1 cut(s)	758
PpsI	GAGTC	4 cut(s)	167, 262, 505, 1156
Ppu21I	YACGTR	1 cut(s)	614
PpuMI	RGGWCCY	1 cut(s)	217
PshBI	ATTAAT	1 cut(s)	1769
Psp124BI	GAGCTC	1 cut(s)	147
Psp5II	RGGWCCY	1 cut(s)	217
Psp6I	CCWGG	3 cut(s)	213, 356, 387
PspGI	CCWGG	3 cut(s)	213, 356, 387
PspN4I	GGNNCC	8 cut(s)	193, 567, 729, 756, 914, 1101, 1638, 1725
PspPI	GGNCC	7 cut(s)	113, 211, 217, 385, 565, 791, 952
PspPPI	RGGWCCY	1 cut(s)	217
PspXI	VCTCGAGB	1 cut(s)	1239
PstNI	CAGNNNCTG	3 cut(s)	220, 1267, 1511
PsuI	RGATCY	2 cut(s)	784, 1099
PsyI	GACNNNGTC	1 cut(s)	281
PvuII	CAGCTG	2 cut(s)	1279, 1508
RsaI	GTAC	2 cut(s)	612, 1237
RsaNI	GTAC	2 cut(s)	611, 1236
RseI	CAYNNNNRTG	1 cut(s)	1269
SacI	GAGCTC	1 cut(s)	147
SapI	GCTCTTC	1 cut(s)	1536
SaqAI	TTAA	9 cut(s)	155, 393, 600, 716, 923, 1029, 1416, 1424, 1769
Sau3AI	GATC	3 cut(s)	784, 1099, 1679
Sau96I	GGNCC	7 cut(s)	113, 211, 217, 385, 565, 791, 952
SchI	GAGTC	4 cut(s)	167, 263, 506, 1156
ScrFI	CCNGG	3 cut(s)	215, 358, 389
SduI	GDGCHC	2 cut(s)	147, 544
SexAI	ACCWGGT	1 cut(s)	387
SfaNI	GCATC	6 cut(s)	558, 824, 877, 1388, 1493, 1768
SfcI	CTRYAG	1 cut(s)	1248
SfoI	GGCGCC	1 cut(s)	756
Sfr274I	CTCGAG	1 cut(s)	1239
SinI	GGWCC	4 cut(s)	217, 385, 565, 952
SlaI	CTCGAG	1 cut(s)	1239
SmiMI	CAYNNNNRTG	1 cut(s)	1269
SmlI	CTYRAG	2 cut(s)	599, 1239
SmoI	CTYRAG	2 cut(s)	599, 1239
SnaBI	TACGTA	1 cut(s)	614
SpeI	ACTAGT	1 cut(s)	1331
SphI	GCATGC	1 cut(s)	1274
Sse9I	AATT	7 cut(s)	821, 920, 1067, 1294, 1559, 1687, 1766
SsiI	CCGC	7 cut(s)	46, 136, 151, 168, 268, 380, 955
SspDI	GGCGCC	1 cut(s)	754
SspMI	CTAG	4 cut(s)	162, 788, 1217, 1332
SstI	GAGCTC	1 cut(s)	147
StyD4I	CCNGG	3 cut(s)	213, 356, 387
StyI	CCWWGG	1 cut(s)	574
TaaI	ACNGT	4 cut(s)	365, 1422, 1697, 1787
TaiI	ACGT	2 cut(s)	616, 1483
TaqII	GACCGA	1 cut(s)	449
TasI	AATT	7 cut(s)	821, 920, 1067, 1294, 1559, 1687, 1766
TfiI	GAWTC	8 cut(s)	417, 961, 966, 1544, 1568, 1643, 1811, 1829
Tru1I	TTAA	9 cut(s)	155, 393, 600, 716, 923, 1029, 1416, 1424, 1769
Tru9I	TTAA	9 cut(s)	155, 393, 600, 716, 923, 1029, 1416, 1424, 1769
TseFI	GTSAC	1 cut(s)	1310
Tsp45I	GTSAC	1 cut(s)	1310
TspGWI	ACGGA	3 cut(s)	48, 790, 1171
Tth111I	GACNNNGTC	1 cut(s)	281
Vha464I	CTTAAG	1 cut(s)	599
VpaK11BI	GGWCC	4 cut(s)	217, 385, 565, 952
VspI	ATTAAT	1 cut(s)	1769
XagI	CCTNNNNNAGG	1 cut(s)	573
XapI	RAATTY	2 cut(s)	821, 1294
XbaI	TCTAGA	1 cut(s)	1216
XceI	RCATGY	1 cut(s)	1274
XcmI	CCANNNNNNNNNTGG	1 cut(s)	581
XhoI	CTCGAG	1 cut(s)	1239
XmiI	GTMKAC	1 cut(s)	40
XspI	CTAG	4 cut(s)	162, 788, 1217, 1332

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.