Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0007235

Physical Location & Seq

Genomic Coordinates Reverse (-)

22917412 .. 22921983

Gene Structure 4572 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g22910.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2730 bp

ATGGCGCAGACGAAGCGAAAATCCAGGGACGGTGGCGGCGGAGACAAGGCAAAGGGAAAGAGAGGCAAGCCCGGCGGCAAGAAGCAGAAAGGCGCCGATGCAAGAGAGAGAAAAGGCCCTCGTTTGCCCAACGTTCTCCGAAAGGAGGTCGAACGCTTAAACCCTATTGAAGATGAAGAGATTGATTCCGATGAGGCGGAGGTTTATGGCCGGGACTTTTACGAGTACGAAGAGGAGCTACCGGAGGAGGAGAAAAGGAAGAACCGCCGGTTCGACCCGGTCGAGAACCTCGAGTACCAGCTTCCTGAAGAATTTGAGGATGAAAATGTGTCATCTGATGATGATGACAATGACATGGGGGACGCTGGAGAGGGTGGGGGTGAGGATGAGGATGAGGATGAGGATGATGATGATGATGATGATGGAAGGCAAGGAATCGCACGTATTCCGGCTTTTGAAGGGAAGAAGAAGAAGAGGAATACCAATGTTGTTGTATCAGAGGCATATCCCGAGTCTGAGTATAACCCTACGTGTGATACTTTGGATGGTGAAGGGCCCGTTAATATTGAAGACCTTTTGAATCCTCTACACGGAAAATCTGGTTATAGCAAACTGAGAAAGAGAATACATCATCTTGAAAAGAAATCCGTTCCTACTCCAGCTCCACTTCCAAAAGCAGATCAAGAGAAATTGGAGAGGATGGCAGCACATGAAAAATCAAAGGAAGAACTGCGAAAGTGGGAACCAATCATTAAGAGGAACAGGGAGGCGCCTACCATATATTTTGATGATGATATGGATTTACGGTCTTCAAGGGCATCTGATTTCAAACCTAGAACTGAATTTGAGAAGAAAATTGCTTCATTAGTTTATGATGACCAGGTTAAAGATGCTCACCTAAAAGACGGTTCAAGGCTTCTTGAATTAAATAAGGTATCTGCTGAAGATGAAAGAGACCGCCATAATCGAATGGCCAAAATGCGCAACCTTCTCTTCCGTCATGAAATGAAGTCAAAGCACATAAAAAAGATCAAATCCAAAACTTATCATCGTTTGTTGAAGAAAGATAGAGTGAAAGCAACATCTGCACAAAGTCAGATCGATCCAGACACTGCTAAAGAACTTGCAATGAAGCAAGAGTATGAACGAGCAAAGGAAAGAATGACTCTGAGGCATAAAGGTACCTCCAAGTGGACAAAGCGCATCAAAGAGCGTGGTATAGATGTCCAAGATGAAGGTACTCGGGCTGCTATAGCTGAACAGCAGCACCTGCACGCTCAGCTGACAAGAAAAATGAATTCTATGAAAGATGGTAGTAGCAGTAGCAGCAGTGATGACAGTAGTGATGAGGATGATATAGATGTATATTCACCTGGTTCAGACCATGCTAGGGCAGTGAAGTTGTTAGAAAAAGCCAAGGAGAAGACACGTAATGTGCTAAAAGATGATGATGAAAATGAAGTGCCTAACTCAGGAGTGCTTTCATTACCTTTCATGGTGCGTGGATTGAAAAAAAGGAATGAGGCAGCTGCTGAAGAAGCTAAACTTGCTCTTCAAGAGTACGAATCATGGTCAAACCCGTTGGAGGATTCAAGTGGGGCAGATAATCTGAATGTTGGCCCTCCAAGTGGTAGAATGGTCTTCAATGGATCTAAAAAGAATGCTCCAGAATCAAGTAATAAGACCAAAACAGACAATAAAATGAGAACAGATAATTATTATGCTAACAGTGATAGTGAAGATGACTTGGAGCCCGAAGAAAATGTTGATGTCGAGAATGACAGAAGTAGTGATTTTCACAAGGATGTCAACATTAGTACTGCGTTACTTCACGAAGATTCTCAAAATCATAAAGATTCTCTTTTCAAGAACTTCGGTGATATTGTTCAAGACCCAGGTCCAAAGACAACACATGAGGTTTCTATTTTTGCTTCAGGCTCATGGAAAAAGATAAAAAGTAGCAATAGTGCGGATGCAAATGGTAAAAAGTCTACTTGTCGCGTGGAATCAGTTGAGCGCAATCAAAATTTGCAAGAACCTGTGGAGGATTTGGATGAGGATAGTGATGCAGATAGCGAGGGGCAGATGGTAGATGGCATTCTTTCTTCAAATCCAAAAGATGAATACCGCCTTCCTTCTCAAGCTGAGCTAATTCGTCAAGCCTTTGTGGCGGATGATGTGGAGGATGAATTTGAGAAGGAGAAACAGGAAGTTCTGAATGAGGAAAACCCTGAACCTGAAAAGCCTACTTTACTCCCTGGCTGGGGTCAGTGGACTCATGTACAGAAAAAGAAAGGCTTACCTTCTTGGATGCAAAAAGAACACGAAGATGCCAAGAAGAAGAGAGAAGAAACCCTTAAAAAAAGGAAGGATGCACATCTTAAACGTGTTATTATCTCGGAAAAGTTGGATAAAAAGGCGGAGAAACTTTTTACAAAAACATTACCTTACCCTTTCACATCCAAAGAAGTTTTTGAACAGAGCATTCGCATGCCCCTGGGTCCTGAATTCAACCCTGCAAGTGCAGTTGGAGCTCTTAATCGGCCTGAAGTGATGAAGAGACCTGGTGTAATTATAAGACCGGTCGAGTTTGAGGAGGTGAATCCTCAAGGAAAAGTAGAGGATCACAAACAGATTGGAAAGAAACAGAAAAAGAGGAATCAGAGTAATAAGAGTAGAAGCAGCAGCGACAAAATTGTGACAAAGGTGAAGACTAAGCTCAAGAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000154 GO:0000447 GO:0000460 GO:0000462 GO:0000466 GO:0000469 GO:0000472 GO:0000478 GO:0000479 GO:0000480 GO:0000966 GO:0000967 GO:0001510 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0030490 GO:0030684 GO:0031167 GO:0031974 GO:0031981 GO:0032040 GO:0032259 GO:0032991 GO:0034470 GO:0034471 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

Utp14

Protein Analysis

910

Amino Acids

103.59

Weight (kDa)

5.67

Isoelectric Point (pI)

50.01

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007235)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02400 AT5G08600 AT5G08600 AT5G08600 AT5G36980
fragaria_vesca	FvH4_2g25830 FvH4_2g25830 FvH4_2g25830 FvH4_2g25830 FvH4_2g25830
malus_domestica	MD03G1289000.v1.1 MD11G1308900.v1.1
prunus_persica	Prupe.8G262300_v2.0.a1 Prupe.8G262300_v2.0.a1
pyrus_communis	pycom03g22910
rosa_chinensis	RchiOBHm_Chr6g0294141
rosa_laevigata	RLG00000011895
rosa_multiflora	Rmu_sc0005037.1_g000007
rosa_roxburghii	Rroxscaffold_7G00173610
rosa_rugosa	Rorug06G0241800
rosa_samantha	Rh6AG354200 Rh6BG361100 Rh6CG368400 Rh6DG355200
rosa_wichuraiana	Rw6G030870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2576
AarI	CACCTGC	1 cut(s)	1278
Acc16I	TGCGCA	1 cut(s)	983
Acc36I	ACCTGC	1 cut(s)	1278
Acc65I	GGTACC	1 cut(s)	1181
AccB1I	GGYRCC	3 cut(s)	92, 769, 1181
AccI	GTMKAC	1 cut(s)	1991
AccII	CGCG	1 cut(s)	2001
AclI	AACGTT	1 cut(s)	132
AclWI	GGATC	3 cut(s)	1097, 1657, 2631
AcoI	YGGCCR	2 cut(s)	208, 972
AcsI	RAATTY	6 cut(s)	311, 842, 1297, 2026, 2189, 2507
AcuI	CTGAAG	5 cut(s)	327, 963, 1554, 1917, 2568
AcyI	GRCGYC	2 cut(s)	93, 770
AfaI	GTAC	7 cut(s)	227, 296, 1183, 1240, 1562, 1819, 2283
AfiI	CCNNNNNNNGG	9 cut(s)	145, 590, 1191, 1390, 1472, 1585, 1628, 2263, 2264
AflIII	ACRYGT	3 cut(s)	530, 1427, 2386
AgeI	ACCGGT	1 cut(s)	2581
AjnI	CCWGG	7 cut(s)	23, 879, 1372, 1894, 2257, 2496, 2563
Alw21I	GWGCWC	1 cut(s)	2536
Alw26I	GTCTC	3 cut(s)	36, 948, 2554
AlwI	GGATC	3 cut(s)	1097, 1657, 2631
AlwNI	CAGNNNCTG	3 cut(s)	1112, 1270, 1532
Ama87I	CYCGRG	3 cut(s)	290, 509, 1242
AoxI	GGCC	6 cut(s)	115, 208, 554, 972, 1618, 2543
ApaI	GGGCCC	1 cut(s)	558
ApeKI	GCWGC	8 cut(s)	704, 1247, 1264, 1326, 1526, 1529, 2682, 2685
ApoI	RAATTY	6 cut(s)	311, 842, 1297, 2026, 2189, 2507
AsiGI	ACCGGT	1 cut(s)	2581
Asp718I	GGTACC	1 cut(s)	1181
AspLEI	GCGC	6 cut(s)	7, 95, 772, 984, 1203, 2019
AspS9I	GGNCC	6 cut(s)	116, 554, 555, 1619, 1898, 2501
AsuC2I	CCSGG	3 cut(s)	72, 212, 278
AsuHPI	GGTGA	7 cut(s)	392, 560, 887, 1362, 1889, 2611, 2719
AvaI	CYCGRG	3 cut(s)	290, 509, 1242
AvaII	GGWCC	2 cut(s)	1898, 2501
BaeGI	GKGCMC	1 cut(s)	558
BalI	TGGCCA	1 cut(s)	974
BanI	GGYRCC	3 cut(s)	92, 769, 1181
BanII	GRGCYC	3 cut(s)	558, 1755, 2536
BarI	GAAGNNNNNNTAC	2 cut(s)	222, 254
BbsI	GAAGAC	5 cut(s)	576, 801, 1430, 1633, 2717
Bbv12I	GWGCWC	1 cut(s)	2536
BbvI	GCAGC	8 cut(s)	716, 1234, 1276, 1338, 1516, 1538, 2694, 2697
BccI	CCATC	6 cut(s)	416, 539, 694, 1304, 2080, 2087
BciT130I	CCWGG	7 cut(s)	25, 881, 1374, 1896, 2259, 2498, 2565
BcnI	CCSGG	3 cut(s)	72, 212, 278
BcoDI	GTCTC	3 cut(s)	36, 948, 2554
BfaI	CTAG	2 cut(s)	834, 1389
BfmI	CTRYAG	1 cut(s)	1251
BfoI	RGCGCY	2 cut(s)	96, 773
BfuAI	ACCTGC	1 cut(s)	1278
BglI	GCCNNNNNGGC	1 cut(s)	2168
BlpI	GCTNAGC	2 cut(s)	1278, 2145
BmcAI	AGTACT	1 cut(s)	1819
Bme18I	GGWCC	2 cut(s)	1898, 2501
BmeT110I	CYCGRG	3 cut(s)	290, 509, 1242
BmgT120I	GGNCC	6 cut(s)	116, 554, 555, 1619, 1898, 2501
BmiI	GGNNCC	7 cut(s)	94, 556, 744, 771, 1183, 1752, 2502
BmsI	GCATC	9 cut(s)	88, 827, 880, 1212, 1963, 2056, 2301, 2320, 2362
BoxI	GACNNNNGTC	1 cut(s)	1896
BpiI	GAAGAC	5 cut(s)	576, 801, 1430, 1633, 2717
BpmI	CTGGAG	3 cut(s)	387, 642, 1650
Bpu1102I	GCTNAGC	2 cut(s)	1278, 2145
BpuEI	CTTGAG	3 cut(s)	2124, 2592, 2705
BpuMI	CCSGG	3 cut(s)	72, 212, 278
Bsa29I	ATCGAT	1 cut(s)	1101
BsaAI	YACGTR	3 cut(s)	443, 531, 1430
BsaBI	GATNNNNATC	1 cut(s)	2376
BsaHI	GRCGYC	2 cut(s)	93, 770
BsaI	GGTCTC	2 cut(s)	948, 2554
BsaJI	CCNNGG	6 cut(s)	24, 1416, 1894, 2257, 2496, 2497
BsaWI	WCCGGW	2 cut(s)	241, 2581
BsaXI	ACNNNNNCTCC	2 cut(s)	646, 676
Bsc4I	CCNNNNNNNGG	9 cut(s)	145, 590, 1191, 1390, 1472, 1585, 1628, 2263, 2264
Bse118I	RCCGGY	2 cut(s)	267, 2581
Bse3DI	GCAATG	1 cut(s)	1134
Bse8I	GATNNNNATC	1 cut(s)	2376
BseBI	CCWGG	7 cut(s)	25, 881, 1374, 1896, 2259, 2498, 2565
BseCI	ATCGAT	1 cut(s)	1101
BseDI	CCNNGG	6 cut(s)	24, 1416, 1894, 2257, 2496, 2497
BseJI	GATNNNNATC	1 cut(s)	2376
BseLI	CCNNNNNNNGG	9 cut(s)	145, 590, 1191, 1390, 1472, 1585, 1628, 2263, 2264
BseMI	GCAATG	1 cut(s)	1134
BseMII	CTCAG	6 cut(s)	507, 605, 1160, 1292, 1485, 2136
BseRI	GAGGAG	4 cut(s)	248, 260, 263, 2609
BseSI	GKGCMC	1 cut(s)	558
BseXI	GCAGC	8 cut(s)	716, 1234, 1276, 1338, 1516, 1538, 2694, 2697
BseYI	CCCAGC	1 cut(s)	2262
BsgI	GTGCAG	3 cut(s)	1071, 1256, 2544
Bsh1236I	CGCG	1 cut(s)	2001
Bsh1285I	CGRYCG	2 cut(s)	282, 2586
BshFI	GGCC	6 cut(s)	117, 210, 556, 974, 1620, 2545
BshNI	GGYRCC	3 cut(s)	92, 769, 1181
BshTI	ACCGGT	1 cut(s)	2581
BshVI	ATCGAT	1 cut(s)	1101
BsiEI	CGRYCG	2 cut(s)	282, 2586
BsiHKAI	GWGCWC	1 cut(s)	2536
BsiHKCI	CYCGRG	3 cut(s)	290, 509, 1242
BsiSI	CCGG	7 cut(s)	72, 211, 242, 268, 278, 449, 2582
BslFI	GGGAC	3 cut(s)	41, 227, 374
BslI	CCNNNNNNNGG	9 cut(s)	145, 590, 1191, 1390, 1472, 1585, 1628, 2263, 2264
BsmAI	GTCTC	3 cut(s)	36, 948, 2554
BsmFI	GGGAC	3 cut(s)	41, 227, 374
BsmI	GAATGC	3 cut(s)	1666, 2097, 2484
BsnI	GGCC	6 cut(s)	117, 210, 556, 974, 1620, 2545
Bso31I	GGTCTC	2 cut(s)	948, 2554
BsoBI	CYCGRG	3 cut(s)	290, 509, 1242
Bsp120I	GGGCCC	1 cut(s)	554
Bsp1286I	GDGCHC	3 cut(s)	558, 1755, 2536
Bsp1407I	TGTACA	1 cut(s)	2281
Bsp143I	GATC	6 cut(s)	679, 1029, 1098, 1102, 1649, 2623
Bsp1720I	GCTNAGC	2 cut(s)	1278, 2145
BspANI	GGCC	6 cut(s)	117, 210, 556, 974, 1620, 2545
BspCNI	CTCAG	6 cut(s)	508, 606, 1161, 1291, 1484, 2137
BspDI	ATCGAT	1 cut(s)	1101
BspFNI	CGCG	1 cut(s)	2001
BspHI	TCATGA	1 cut(s)	1000
BspLI	GGNNCC	7 cut(s)	94, 556, 744, 771, 1183, 1752, 2502
BspMI	ACCTGC	1 cut(s)	1278
BspPI	GGATC	3 cut(s)	1097, 1657, 2631
BspQI	GCTCTTC	1 cut(s)	1557
BspT107I	GGYRCC	3 cut(s)	92, 769, 1181
BspTNI	GGTCTC	2 cut(s)	948, 2554
BsrDI	GCAATG	1 cut(s)	1134
BsrFI	RCCGGY	2 cut(s)	267, 2581
BsrGI	TGTACA	1 cut(s)	2281
BssAI	RCCGGY	2 cut(s)	267, 2581
BssECI	CCNNGG	6 cut(s)	24, 1416, 1894, 2257, 2496, 2497
BssMI	GATC	6 cut(s)	679, 1029, 1098, 1102, 1649, 2623
BssNI	GRCGYC	2 cut(s)	93, 770
BssT1I	CCWWGG	1 cut(s)	1416
Bst2UI	CCWGG	7 cut(s)	25, 881, 1374, 1896, 2259, 2498, 2565
Bst4CI	ACNGT	5 cut(s)	32, 807, 908, 1340, 1730
Bst6I	CTCTTC	7 cut(s)	171, 225, 467, 998, 1557, 2336, 2552
BstACI	GRCGYC	2 cut(s)	93, 770
BstAPI	GCANNNNNTGC	2 cut(s)	1085, 1270
BstAUI	TGTACA	1 cut(s)	2281
BstBAI	YACGTR	3 cut(s)	443, 531, 1430
BstC8I	GCNNGC	3 cut(s)	68, 1275, 2492
BstDEI	CTNAG	7 cut(s)	516, 614, 1169, 1278, 1471, 2145, 2715
BstENI	CCTNNNNNAGG	1 cut(s)	1470
BstFNI	CGCG	1 cut(s)	2001
BstH2I	RGCGCY	2 cut(s)	96, 773
BstHHI	GCGC	6 cut(s)	7, 95, 772, 984, 1203, 2019
BstKTI	GATC	6 cut(s)	682, 1032, 1101, 1105, 1652, 2626
BstMAI	GTCTC	3 cut(s)	36, 948, 2554
BstMBI	GATC	6 cut(s)	679, 1029, 1098, 1102, 1649, 2623
BstMCI	CGRYCG	2 cut(s)	282, 2586
BstNI	CCWGG	7 cut(s)	25, 881, 1374, 1896, 2259, 2498, 2565
BstNSI	RCATGY	1 cut(s)	2494
BstPAI	GACNNNNGTC	1 cut(s)	1896
BstSFI	CTRYAG	1 cut(s)	1251
BstSLI	GKGCMC	1 cut(s)	558
BstUI	CGCG	1 cut(s)	2001
BstV1I	GCAGC	8 cut(s)	716, 1234, 1276, 1338, 1516, 1538, 2694, 2697
BstV2I	GAAGAC	5 cut(s)	576, 801, 1430, 1633, 2717
BstX2I	RGATCY	1 cut(s)	1649
BstYI	RGATCY	1 cut(s)	1649
Bsu15I	ATCGAT	1 cut(s)	1101
BsuRI	GGCC	6 cut(s)	117, 210, 556, 974, 1620, 2545
BsuTUI	ATCGAT	1 cut(s)	1101
BtsI	GCAGTG	3 cut(s)	1110, 1336, 1401
BtsIMutI	CAGTG	5 cut(s)	1110, 1336, 1401, 1735, 2276
BveI	ACCTGC	1 cut(s)	1278
Cac8I	GCNNGC	3 cut(s)	68, 1275, 2492
CaiI	CAGNNNCTG	3 cut(s)	1112, 1270, 1532
CciI	TCATGA	1 cut(s)	1000
CfoI	GCGC	6 cut(s)	7, 95, 772, 984, 1203, 2019
Cfr10I	RCCGGY	2 cut(s)	267, 2581
Cfr13I	GGNCC	6 cut(s)	116, 554, 555, 1619, 1898, 2501
ClaI	ATCGAT	1 cut(s)	1101
CseI	GACGC	1 cut(s)	371
CsiI	ACCWGGT	3 cut(s)	879, 1372, 2563
Csp6I	GTAC	7 cut(s)	226, 295, 1182, 1239, 1561, 1818, 2282
CspAI	ACCGGT	1 cut(s)	2581
CspCI	CAANNNNNGTGG	2 cut(s)	1195, 1230
CviQI	GTAC	7 cut(s)	226, 295, 1182, 1239, 1561, 1818, 2282
DdeI	CTNAG	7 cut(s)	516, 614, 1169, 1278, 1471, 2145, 2715
DinI	GGCGCC	2 cut(s)	94, 771
DpnI	GATC	6 cut(s)	681, 1031, 1100, 1104, 1651, 2625
DpnII	GATC	6 cut(s)	679, 1029, 1098, 1102, 1649, 2623
EaeI	YGGCCR	2 cut(s)	208, 972
Eam1104I	CTCTTC	7 cut(s)	171, 225, 467, 998, 1557, 2336, 2552
EarI	CTCTTC	7 cut(s)	171, 225, 467, 998, 1557, 2336, 2552
EciI	GGCGGA	4 cut(s)	54, 212, 2186, 2435
Ecl136II	GAGCTC	1 cut(s)	2534
Eco130I	CCWWGG	1 cut(s)	1416
Eco24I	GRGCYC	3 cut(s)	558, 1755, 2536
Eco31I	GGTCTC	2 cut(s)	948, 2554
Eco47I	GGWCC	2 cut(s)	1898, 2501
Eco53kI	GAGCTC	1 cut(s)	2534
Eco57I	CTGAAG	5 cut(s)	327, 963, 1554, 1917, 2568
Eco88I	CYCGRG	3 cut(s)	290, 509, 1242
EcoICRI	GAGCTC	1 cut(s)	2534
EcoNI	CCTNNNNNAGG	1 cut(s)	1470
EcoO109I	RGGNCCY	3 cut(s)	116, 554, 2501
EcoRI	GAATTC	2 cut(s)	1297, 2507
EcoRII	CCWGG	7 cut(s)	23, 879, 1372, 1894, 2257, 2496, 2563
EcoT14I	CCWWGG	1 cut(s)	1416
EcoT38I	GRGCYC	3 cut(s)	558, 1755, 2536
EgeI	GGCGCC	2 cut(s)	94, 771
EheI	GGCGCC	2 cut(s)	94, 771
ErhI	CCWWGG	1 cut(s)	1416
FalI	AAGNNNNNCTT	8 cut(s)	1530, 1562, 1845, 1877, 2282, 2314, 2340, 2372
FaqI	GGGAC	3 cut(s)	41, 227, 374
FblI	GTMKAC	1 cut(s)	1991
FriOI	GRGCYC	3 cut(s)	558, 1755, 2536
FspBI	CTAG	2 cut(s)	834, 1389
FspI	TGCGCA	1 cut(s)	983
GlaI	GCGC	6 cut(s)	6, 94, 771, 983, 1202, 2018
GsaI	CCCAGC	1 cut(s)	2266
GsuI	CTGGAG	3 cut(s)	387, 642, 1650
HaeII	RGCGCY	2 cut(s)	96, 773
HaeIII	GGCC	6 cut(s)	117, 210, 556, 974, 1620, 2545
HapII	CCGG	7 cut(s)	72, 211, 242, 268, 278, 449, 2582
HgaI	GACGC	1 cut(s)	371
HhaI	GCGC	6 cut(s)	7, 95, 772, 984, 1203, 2019
Hin1I	GRCGYC	2 cut(s)	93, 770
Hin6I	GCGC	6 cut(s)	5, 93, 770, 982, 1201, 2017
HinP1I	GCGC	6 cut(s)	5, 93, 770, 982, 1201, 2017
HincII	GTYRAC	1 cut(s)	1810
HindII	GTYRAC	1 cut(s)	1810
HpaII	CCGG	7 cut(s)	72, 211, 242, 268, 278, 449, 2582
HphI	GGTGA	7 cut(s)	392, 560, 887, 1362, 1889, 2611, 2719
Hpy166II	GTNNAC	4 cut(s)	1194, 1810, 1992, 2274
Hpy8I	GTNNAC	4 cut(s)	1194, 1810, 1992, 2274
HpyCH4III	ACNGT	5 cut(s)	32, 807, 908, 1340, 1730
HpyCH4IV	ACGT	5 cut(s)	132, 442, 530, 1429, 2386
HpyF3I	CTNAG	7 cut(s)	516, 614, 1169, 1278, 1471, 2145, 2715
HpySE526I	ACGT	5 cut(s)	132, 442, 530, 1429, 2386
Hsp92I	GRCGYC	2 cut(s)	93, 770
HspAI	GCGC	6 cut(s)	5, 93, 770, 982, 1201, 2017
KasI	GGCGCC	2 cut(s)	92, 769
KpnI	GGTACC	1 cut(s)	1185
Kzo9I	GATC	6 cut(s)	679, 1029, 1098, 1102, 1649, 2623
LguI	GCTCTTC	1 cut(s)	1557
LmnI	GCTCC	5 cut(s)	235, 667, 1669, 1750, 2531
Lsp1109I	GCAGC	8 cut(s)	716, 1234, 1276, 1338, 1516, 1538, 2694, 2697
LweI	GCATC	9 cut(s)	88, 827, 880, 1212, 1963, 2056, 2301, 2320, 2362
MabI	ACCWGGT	3 cut(s)	879, 1372, 2563
MaeI	CTAG	2 cut(s)	834, 1389
MaeII	ACGT	5 cut(s)	132, 442, 530, 1429, 2386
MaeIII	GTNAC	2 cut(s)	1824, 2698
MalI	GATC	6 cut(s)	681, 1031, 1100, 1104, 1651, 2625
MboI	GATC	6 cut(s)	679, 1029, 1098, 1102, 1649, 2623
MflI	RGATCY	1 cut(s)	1649
MhlI	GDGCHC	3 cut(s)	558, 1755, 2536
MlsI	TGGCCA	1 cut(s)	974
MluNI	TGGCCA	1 cut(s)	974
Mly113I	GGCGCC	2 cut(s)	93, 770
MlyI	GAGTC	3 cut(s)	521, 1159, 2269
MmeI	TCCRAC	3 cut(s)	1563, 2388, 2509
Mox20I	TGGCCA	1 cut(s)	974
MscI	TGGCCA	1 cut(s)	974
MseI	TTAA	8 cut(s)	158, 561, 753, 885, 926, 2358, 2382, 2538
MslI	CAYNNNNRTG	3 cut(s)	1803, 2328, 2489
Msp20I	TGGCCA	1 cut(s)	974
MspA1I	CMGCKG	2 cut(s)	1282, 1529
MspI	CCGG	7 cut(s)	72, 211, 242, 268, 278, 449, 2582
Mva1269I	GAATGC	3 cut(s)	1666, 2097, 2484
MvaI	CCWGG	7 cut(s)	25, 881, 1374, 1896, 2259, 2498, 2565
MvnI	CGCG	1 cut(s)	2001
NarI	GGCGCC	2 cut(s)	93, 770
NciI	CCSGG	3 cut(s)	72, 212, 278
NdeII	GATC	6 cut(s)	679, 1029, 1098, 1102, 1649, 2623
NlaIV	GGNNCC	7 cut(s)	94, 556, 744, 771, 1183, 1752, 2502
NmuCI	GTSAC	1 cut(s)	2698
NsbI	TGCGCA	1 cut(s)	983
NspI	RCATGY	1 cut(s)	2494
PaeI	GCATGC	1 cut(s)	2494
PaeR7I	CTCGAG	1 cut(s)	290
PagI	TCATGA	1 cut(s)	1000
PaqCI	CACCTGC	1 cut(s)	1278
PasI	CCCWGGG	1 cut(s)	2497
PciSI	GCTCTTC	1 cut(s)	1557
PcsI	WCGNNNNNNNCGW	2 cut(s)	279, 288
PctI	GAATGC	3 cut(s)	1666, 2097, 2484
PflFI	GACNNNGTC	1 cut(s)	278
PinAI	ACCGGT	1 cut(s)	2581
PleI	GAGTC	3 cut(s)	520, 1159, 2269
PluTI	GGCGCC	2 cut(s)	96, 773
PpsI	GAGTC	3 cut(s)	520, 1159, 2269
Ppu21I	YACGTR	3 cut(s)	443, 531, 1430
PpuMI	RGGWCCY	1 cut(s)	2501
PshAI	GACNNNNGTC	1 cut(s)	1896
PsiI	TTATAA	1 cut(s)	2576
Psp124BI	GAGCTC	1 cut(s)	2536
Psp1406I	AACGTT	1 cut(s)	132
Psp5II	RGGWCCY	1 cut(s)	2501
Psp6I	CCWGG	7 cut(s)	23, 879, 1372, 1894, 2257, 2496, 2563
PspFI	CCCAGC	1 cut(s)	2262
PspGI	CCWGG	7 cut(s)	23, 879, 1372, 1894, 2257, 2496, 2563
PspN4I	GGNNCC	7 cut(s)	94, 556, 744, 771, 1183, 1752, 2502
PspOMI	GGGCCC	1 cut(s)	554
PspPI	GGNCC	6 cut(s)	116, 554, 555, 1619, 1898, 2501
PspPPI	RGGWCCY	1 cut(s)	2501
PspXI	VCTCGAGB	1 cut(s)	290
PsrI	GAACNNNNNNTAC	2 cut(s)	278, 310
PstNI	CAGNNNCTG	3 cut(s)	1112, 1270, 1532
PsuI	RGATCY	1 cut(s)	1649
PsyI	GACNNNGTC	1 cut(s)	278
PvuII	CAGCTG	2 cut(s)	1282, 1529
RsaI	GTAC	7 cut(s)	227, 296, 1183, 1240, 1562, 1819, 2283
RsaNI	GTAC	7 cut(s)	226, 295, 1182, 1239, 1561, 1818, 2282
RseI	CAYNNNNRTG	3 cut(s)	1803, 2328, 2489
SacI	GAGCTC	1 cut(s)	2536
SapI	GCTCTTC	1 cut(s)	1557
SaqAI	TTAA	8 cut(s)	158, 561, 753, 885, 926, 2358, 2382, 2538
Sau3AI	GATC	6 cut(s)	679, 1029, 1098, 1102, 1649, 2623
Sau96I	GGNCC	6 cut(s)	116, 554, 555, 1619, 1898, 2501
ScaI	AGTACT	1 cut(s)	1819
SchI	GAGTC	3 cut(s)	521, 1159, 2269
SduI	GDGCHC	3 cut(s)	558, 1755, 2536
SexAI	ACCWGGT	3 cut(s)	879, 1372, 2563
SfaNI	GCATC	9 cut(s)	88, 827, 880, 1212, 1963, 2056, 2301, 2320, 2362
SfcI	CTRYAG	1 cut(s)	1251
SfoI	GGCGCC	2 cut(s)	94, 771
Sfr274I	CTCGAG	1 cut(s)	290
SinI	GGWCC	2 cut(s)	1898, 2501
SlaI	CTCGAG	1 cut(s)	290
SmiMI	CAYNNNNRTG	3 cut(s)	1803, 2328, 2489
SmlI	CTYRAG	4 cut(s)	290, 2139, 2607, 2720
SmoI	CTYRAG	4 cut(s)	290, 2139, 2607, 2720
SphI	GCATGC	1 cut(s)	2494
SspDI	GGCGCC	2 cut(s)	92, 769
SspI	AATATT	1 cut(s)	565
SspMI	CTAG	2 cut(s)	834, 1389
SstI	GAGCTC	1 cut(s)	2536
StyI	CCWWGG	1 cut(s)	1416
TaaI	ACNGT	5 cut(s)	32, 807, 908, 1340, 1730
TaiI	ACGT	5 cut(s)	135, 445, 533, 1432, 2389
TaqI	TCGA	8 cut(s)	150, 273, 282, 291, 967, 1101, 1773, 2586
TatI	WGTACW	2 cut(s)	1817, 2281
TauI	GCSGC	2 cut(s)	39, 78
Tru1I	TTAA	8 cut(s)	158, 561, 753, 885, 926, 2358, 2382, 2538
Tru9I	TTAA	8 cut(s)	158, 561, 753, 885, 926, 2358, 2382, 2538
TscAI	CASTG	5 cut(s)	1117, 1336, 1401, 1735, 2276
TseFI	GTSAC	1 cut(s)	2698
TseI	GCWGC	8 cut(s)	704, 1247, 1264, 1326, 1526, 1529, 2682, 2685
Tsp45I	GTSAC	1 cut(s)	2698
TspGWI	ACGGA	3 cut(s)	606, 637, 986
TspRI	CASTG	5 cut(s)	1117, 1336, 1401, 1735, 2276
Tth111I	GACNNNGTC	1 cut(s)	278
VpaK11BI	GGWCC	2 cut(s)	1898, 2501
XagI	CCTNNNNNAGG	1 cut(s)	1470
XapI	RAATTY	6 cut(s)	311, 842, 1297, 2026, 2189, 2507
XceI	RCATGY	1 cut(s)	2494
XhoI	CTCGAG	1 cut(s)	290
XmiI	GTMKAC	1 cut(s)	1991
XspI	CTAG	2 cut(s)	834, 1389
ZrmI	AGTACT	1 cut(s)	1819

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.