Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0007235

Physical Location & Seq

Genomic Coordinates Forward (+)

42270371 .. 42275092

Gene Structure 4722 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1308900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2712 bp

ATGGTGCAGACGAAGCGAAAATCCATAGACGGCGGCGGCGGAGACAAGGCAAAGGGAAAGAGAGGCAAGCCCGGCGGCAAGAAGCAGAAGAAAGGCGCGGACGCAAGAGAGAGAAAAGGCCCTCGTTTGCCCAACGTTCTCCGAAAGGAGGTCGAACGCTTAAACCCTATCGAAGATGAAGATATTGATTCCGATGAGGCGGAGGTTTATGGCCGGGACTTTTACGAGTACGAAGAGGAGCTGCCGGAGGAGGAGAAAAGGAAGAACCGCCGGTTCGACCCGGTCGAGAACCTCGAGTATCAGCTTCCTGATGAATTTGAGGATGAAAATGTGTCATCTGAGGATGATGACAATGACATGGGGGAGGCTGGAGAGGGTGGGGGTGAAGATGAGGATGATGATGATGACGATGACGATGGAAGGCAAGGAATCACACGAATCCCGGCTTTTGAAGGGAAGAAGAAGAGGAATACCAATGTTGTTGTATCAGAGGCATATCCCGAGTCTGAGTATAACCCTACTCGTGATACTTTGGATGGTGAAGGGCCTGTTAGCATTGAAGACCTTCTGAACCCTCTCCATGGAAAATCTGGTTATAGCAAACTGAGAAAGAGAATACATCATCTTGAAAAGAAATCCGTTCCTACTCCAGCTCCACTTCCAAAAGCAGATCAAGATAAATTGGAGAGGATGGCAGCATATGAAAGATCAACGGAAGAACTGCGAAAGTGGGAACCAATCATTAAGAGGAACAGGGAGGCGCCTACCATATATTTTGATGATGATATGGATTTGCGATCTTCAACAACTTCTGATTTCAAACCTAGAACTGAATTTGAGAAGAAAATTGCTTCATTAGTTTATGATGACCAGGTTAAAGATGCTCACCTAAAAGACGGTTCAAGGCTTCTTGAATTAAATAAGGTATCCGTTGAAGATGAAAGAGACCGCCATAATCGAATGGCCAAAATGCGCAGCCTTCTCTTCCGTCATGAAATGAAGTCAAAACACATAAAAAAGATCAAATCCAAAACTTATCATCGTTTGTTGAAGAAAGATAGATTGAAAGCAACATCTGCACAAAGTCAAATGGATCCAGACGCTGCTAAAGAACTTGCAATGAAGCAAGAGTATGAACGAGCAAAGGAAAGAATGACTTTGAGGCACAAAGGTAGCTCCAAGTGGACAAAGCGCATCAAAGAGCGTGGTATAGATGTCCAAGATGAAGGTACTCGGGCTGCTATAGCTGAACAGCAGCACCTGCATGCTCAGCTGACAAGAAAAATGAATTCTATGAAAGACGGTAGTAGCAGCAGCAGTGATGACAGTAGTGATGAGGATGATATAGATGCATATTCACCTGGTTCAGAACATGCTAGGGCAGCAAAGCTGTTAGAAAAAGCAAAGGAGAAGACACGTAATGTGCTAATAGATGATGATGAAGTGCCCAACTCAGGAGTGCTTTCGTTACCTTTCATGGTGCGTGGATTGAAAAAAAAGAATGAGGCAGCTGCTGAAGAAGCTAAACTTGCTCTTCAAGAGTATGAATCATGGTCAAACCCGTTGGAGGATTCAAGTGGGGCAGATAATCTGAAAGTGGGCCCTCCAAGTGGTAGAATGGTCTTCAATGGATCTAAAAATAAGGCTCCAGAATCAAGTAATAAGACCAAAGCAGACAATAAAATGAGTTCAGATAATTATTATGCTAATAGTGATAATGAAGATGACTTGGAGCCCGAAGAAAATGTTGATGTCGAGAAAGACAGAAGTAGTGATTTGTACAAGGATGTCAACATTAGTGCTGCGCTACTTCATGAAGATTCTCAAAATCACAACAATTCTCTTTTCAAGAACTTCGGTGATATTGTTCAAGCCCCAGGTCTGAAGACAACACATGAGGTTTCTATTTTTGCTTCAGGCTCGTGGAAAAAGATAAAAAGTGGCAATAGTGTGGATGCAAATGGTAAAAAGTCTACTCGTCCTCCGGAATCAGTTGAGCGGAATCAAAATTTGCAAGAACGTGTGGAGGATTTGGATGAGGATAGTGACGCAGATAGTGAGGGGCAGATGCTAGATGGATTTCTTACTTCAGATCCAAAAGATGAATACCGCCTTCCTTCTCAAGCTGAGCTAATTCGTCAAGCCTTTGCAGCGGATGATGTAGAGGATGAATTTGAGAAGGAGAAACAGGAAGTTCTGAATGAGGAAAACCCTGAACCCGAAAAGCCTACTTTACTCCCTGGCTGGGGTCAGTGGACTCATGTACAGAAAAAGAAAGGCTTACCTTCTTGGATGCAAAAAGAACACGAAGATGCCAAGAAGAAGAGAGAAGAAACCCTTAAAAAGAGGAAGGATGCACATCTTAAACGTGTTATTATCTCGGAAAAGTTGGATAAAAAGGCGGAGAAACTTTTTACAAAAACATTACCTTACCCTTTCACATCCAAAGAAGTTTTTGAACAGAGCATTCGCATGCCCCTGGGTCCTGAATTCAACCCTGCAAGTGCTGTTGGAGCTCTTAATCGGCCTGAAGTGATGAAGAGACCCGGTGTAATTATAAGACCGCTCGAGTTTGAGGAGGTGAATCCTCAAGGAAAAGTAGAGGATCACAAACAGAGTGGAAAGAAACAGAAAAAGAGGAATAAGAGTAACAAGAGTAAAAGCGGCAGCGACAAAATTGTGACAAAGGTGAAGACTAAGCTCAAGAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000154 GO:0000447 GO:0000460 GO:0000462 GO:0000466 GO:0000469 GO:0000472 GO:0000478 GO:0000479 GO:0000480 GO:0000966 GO:0000967 GO:0001510 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0030490 GO:0030684 GO:0031167 GO:0031974 GO:0031981 GO:0032040 GO:0032259 GO:0032991 GO:0034470 GO:0034471 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

Utp14

Protein Analysis

904

Amino Acids

102.69

Weight (kDa)

5.76

Isoelectric Point (pI)

47.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Utp14	PF04615	149 - 858	9.7e-171	Utp14 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007235)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02400 AT5G08600 AT5G08600 AT5G08600 AT5G36980
fragaria_vesca	FvH4_2g25830 FvH4_2g25830 FvH4_2g25830 FvH4_2g25830 FvH4_2g25830
malus_domestica	MD03G1289000.v1.1 MD11G1308900.v1.1
prunus_persica	Prupe.8G262300_v2.0.a1 Prupe.8G262300_v2.0.a1
pyrus_communis	pycom03g22910
rosa_chinensis	RchiOBHm_Chr6g0294141
rosa_laevigata	RLG00000011895
rosa_multiflora	Rmu_sc0005037.1_g000007
rosa_roxburghii	Rroxscaffold_7G00173610
rosa_rugosa	Rorug06G0241800
rosa_samantha	Rh6AG354200 Rh6BG361100 Rh6CG368400 Rh6DG355200
rosa_wichuraiana	Rw6G030870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2558
AarI	CACCTGC	1 cut(s)	1269
Acc16I	TGCGCA	1 cut(s)	974
Acc36I	ACCTGC	1 cut(s)	1269
AccB1I	GGYRCC	1 cut(s)	760
AccBSI	CCGCTC	2 cut(s)	1999, 2566
AccI	GTMKAC	1 cut(s)	1973
AccII	CGCG	1 cut(s)	98
AccIII	TCCGGA	1 cut(s)	1984
AclI	AACGTT	1 cut(s)	135
AclWI	GGATC	5 cut(s)	1088, 1101, 1639, 2087, 2613
AcoI	YGGCCR	2 cut(s)	211, 963
AcsI	RAATTY	6 cut(s)	314, 833, 1288, 2008, 2171, 2489
AcuI	CTGAAG	5 cut(s)	1536, 1899, 1904, 2073, 2550
AcyI	GRCGYC	1 cut(s)	761
AfaI	GTAC	4 cut(s)	230, 1231, 1781, 2265
AfiI	CCNNNNNNNGG	7 cut(s)	148, 581, 1454, 1567, 1610, 2245, 2246
AflIII	ACRYGT	3 cut(s)	1415, 2020, 2368
AjnI	CCWGG	5 cut(s)	870, 1360, 1876, 2239, 2478
Alw21I	GWGCWC	1 cut(s)	2518
Alw26I	GTCTC	3 cut(s)	36, 939, 2536
AlwI	GGATC	5 cut(s)	1088, 1101, 1639, 2087, 2613
AlwNI	CAGNNNCTG	3 cut(s)	1103, 1261, 1514
Ama87I	CYCGRG	4 cut(s)	293, 500, 1233, 2567
Aor13HI	TCCGGA	1 cut(s)	1984
AoxI	GGCC	6 cut(s)	118, 211, 545, 963, 1600, 2525
ApaI	GGGCCC	1 cut(s)	1604
ApoI	RAATTY	6 cut(s)	314, 833, 1288, 2008, 2171, 2489
Asp700I	GAANNNNTTC	1 cut(s)	564
AspLEI	GCGC	5 cut(s)	98, 763, 975, 1194, 1807
AspS9I	GGNCC	5 cut(s)	119, 545, 1600, 1601, 2483
AsuC2I	CCSGG	5 cut(s)	72, 215, 281, 443, 2547
AsuHPI	GGTGA	7 cut(s)	395, 551, 878, 1350, 1871, 2593, 2701
AvaI	CYCGRG	4 cut(s)	293, 500, 1233, 2567
AvaII	GGWCC	1 cut(s)	2483
BaeGI	GKGCMC	2 cut(s)	1449, 1604
BalI	TGGCCA	1 cut(s)	965
BamHI	GGATCC	1 cut(s)	1093
BanI	GGYRCC	1 cut(s)	760
BanII	GRGCYC	3 cut(s)	1604, 1737, 2518
BauI	CACGAG	2 cut(s)	522, 1921
BbsI	GAAGAC	5 cut(s)	567, 1418, 1615, 1892, 2699
Bbv12I	GWGCWC	1 cut(s)	2518
BccI	CCATC	4 cut(s)	410, 530, 685, 2069
BceAI	ACGGC	1 cut(s)	46
BciT130I	CCWGG	5 cut(s)	872, 1362, 1878, 2241, 2480
BciVI	GTATCC	1 cut(s)	937
BcnI	CCSGG	5 cut(s)	72, 215, 281, 443, 2547
BcoDI	GTCTC	3 cut(s)	36, 939, 2536
BfaI	CTAG	3 cut(s)	825, 1377, 2072
BfmI	CTRYAG	1 cut(s)	1242
BfoI	RGCGCY	1 cut(s)	764
BfuAI	ACCTGC	1 cut(s)	1269
BfuI	GTATCC	1 cut(s)	937
BlpI	GCTNAGC	2 cut(s)	1269, 2127
Bme18I	GGWCC	1 cut(s)	2483
BmeT110I	CYCGRG	4 cut(s)	293, 500, 1233, 2567
BmgT120I	GGNCC	5 cut(s)	119, 545, 1600, 1601, 2483
BmiI	GGNNCC	7 cut(s)	735, 762, 1095, 1602, 1647, 1734, 2484
BmsI	GCATC	8 cut(s)	871, 1203, 1339, 1945, 2058, 2283, 2302, 2344
BpiI	GAAGAC	5 cut(s)	567, 1418, 1615, 1892, 2699
BpmI	CTGGAG	3 cut(s)	390, 633, 1632
Bpu1102I	GCTNAGC	2 cut(s)	1269, 2127
BpuEI	CTTGAG	3 cut(s)	2106, 2574, 2687
BpuMI	CCSGG	5 cut(s)	72, 215, 281, 443, 2547
BsaAI	YACGTR	1 cut(s)	1418
BsaBI	GATNNNNATC	1 cut(s)	2358
BsaHI	GRCGYC	1 cut(s)	761
BsaI	GGTCTC	2 cut(s)	939, 2536
BsaJI	CCNNGG	5 cut(s)	580, 1876, 2239, 2478, 2479
BsaWI	WCCGGW	1 cut(s)	1984
BsaXI	ACNNNNNCTCC	4 cut(s)	637, 667, 1966, 1996
Bsc4I	CCNNNNNNNGG	7 cut(s)	148, 581, 1454, 1567, 1610, 2245, 2246
Bse118I	RCCGGY	1 cut(s)	270
Bse3DI	GCAATG	1 cut(s)	1125
Bse8I	GATNNNNATC	1 cut(s)	2358
BseAI	TCCGGA	1 cut(s)	1984
BseBI	CCWGG	5 cut(s)	872, 1362, 1878, 2241, 2480
BseDI	CCNNGG	5 cut(s)	580, 1876, 2239, 2478, 2479
BseJI	GATNNNNATC	1 cut(s)	2358
BseLI	CCNNNNNNNGG	7 cut(s)	148, 581, 1454, 1567, 1610, 2245, 2246
BseMI	GCAATG	1 cut(s)	1125
BseMII	CTCAG	6 cut(s)	330, 498, 596, 1283, 1467, 2118
BseRI	GAGGAG	4 cut(s)	251, 263, 266, 2591
BseSI	GKGCMC	2 cut(s)	1449, 1604
BseYI	CCCAGC	1 cut(s)	2244
BsgI	GTGCAG	2 cut(s)	26, 1062
Bsh1236I	CGCG	1 cut(s)	98
Bsh1285I	CGRYCG	1 cut(s)	285
BshFI	GGCC	6 cut(s)	120, 213, 547, 965, 1602, 2527
BshNI	GGYRCC	1 cut(s)	760
BsiEI	CGRYCG	1 cut(s)	285
BsiHKAI	GWGCWC	1 cut(s)	2518
BsiHKCI	CYCGRG	4 cut(s)	293, 500, 1233, 2567
BsiSI	CCGG	8 cut(s)	72, 214, 245, 271, 281, 443, 1985, 2547
BslFI	GGGAC	1 cut(s)	230
BslI	CCNNNNNNNGG	7 cut(s)	148, 581, 1454, 1567, 1610, 2245, 2246
BsmAI	GTCTC	3 cut(s)	36, 939, 2536
BsmFI	GGGAC	1 cut(s)	230
BsmI	GAATGC	1 cut(s)	2466
BsnI	GGCC	6 cut(s)	120, 213, 547, 965, 1602, 2527
Bso31I	GGTCTC	2 cut(s)	939, 2536
BsoBI	CYCGRG	4 cut(s)	293, 500, 1233, 2567
Bsp120I	GGGCCC	1 cut(s)	1600
Bsp1286I	GDGCHC	4 cut(s)	1449, 1604, 1737, 2518
Bsp13I	TCCGGA	1 cut(s)	1984
Bsp1407I	TGTACA	2 cut(s)	1779, 2263
Bsp143I	GATC	8 cut(s)	670, 707, 797, 1020, 1093, 1631, 2092, 2605
Bsp1720I	GCTNAGC	2 cut(s)	1269, 2127
Bsp19I	CCATGG	1 cut(s)	580
BspANI	GGCC	6 cut(s)	120, 213, 547, 965, 1602, 2527
BspCNI	CTCAG	6 cut(s)	331, 499, 597, 1282, 1466, 2119
BspEI	TCCGGA	1 cut(s)	1984
BspFNI	CGCG	1 cut(s)	98
BspHI	TCATGA	2 cut(s)	991, 1813
BspLI	GGNNCC	7 cut(s)	735, 762, 1095, 1602, 1647, 1734, 2484
BspMI	ACCTGC	1 cut(s)	1269
BspPI	GGATC	5 cut(s)	1088, 1101, 1639, 2087, 2613
BspQI	GCTCTTC	1 cut(s)	1539
BspT107I	GGYRCC	1 cut(s)	760
BspTNI	GGTCTC	2 cut(s)	939, 2536
BsrBI	CCGCTC	2 cut(s)	1999, 2566
BsrDI	GCAATG	1 cut(s)	1125
BsrFI	RCCGGY	1 cut(s)	270
BsrGI	TGTACA	2 cut(s)	1779, 2263
BssAI	RCCGGY	1 cut(s)	270
BssECI	CCNNGG	5 cut(s)	580, 1876, 2239, 2478, 2479
BssMI	GATC	8 cut(s)	670, 707, 797, 1020, 1093, 1631, 2092, 2605
BssNI	GRCGYC	1 cut(s)	761
BssSI	CACGAG	2 cut(s)	522, 1921
BssT1I	CCWWGG	1 cut(s)	580
Bst2BI	CACGAG	2 cut(s)	522, 1921
Bst2UI	CCWGG	5 cut(s)	872, 1362, 1878, 2241, 2480
Bst4CI	ACNGT	3 cut(s)	899, 1304, 1328
Bst6I	CTCTTC	6 cut(s)	228, 458, 989, 1539, 2318, 2534
BstACI	GRCGYC	1 cut(s)	761
BstAPI	GCANNNNNTGC	2 cut(s)	1076, 1261
BstAUI	TGTACA	2 cut(s)	1779, 2263
BstBAI	YACGTR	1 cut(s)	1418
BstC8I	GCNNGC	3 cut(s)	68, 1266, 2474
BstDEI	CTNAG	7 cut(s)	339, 507, 605, 1269, 1453, 2127, 2697
BstDSI	CCRYGG	1 cut(s)	580
BstFNI	CGCG	1 cut(s)	98
BstH2I	RGCGCY	1 cut(s)	764
BstHHI	GCGC	5 cut(s)	98, 763, 975, 1194, 1807
BstKTI	GATC	8 cut(s)	673, 710, 800, 1023, 1096, 1634, 2095, 2608
BstMAI	GTCTC	3 cut(s)	36, 939, 2536
BstMBI	GATC	8 cut(s)	670, 707, 797, 1020, 1093, 1631, 2092, 2605
BstMCI	CGRYCG	1 cut(s)	285
BstNI	CCWGG	5 cut(s)	872, 1362, 1878, 2241, 2480
BstNSI	RCATGY	3 cut(s)	1268, 1376, 2476
BstSFI	CTRYAG	1 cut(s)	1242
BstSLI	GKGCMC	2 cut(s)	1449, 1604
BstUI	CGCG	1 cut(s)	98
BstV2I	GAAGAC	5 cut(s)	567, 1418, 1615, 1892, 2699
BstX2I	RGATCY	3 cut(s)	1093, 1631, 2092
BstYI	RGATCY	3 cut(s)	1093, 1631, 2092
BsuI	GTATCC	1 cut(s)	937
BsuRI	GGCC	6 cut(s)	120, 213, 547, 965, 1602, 2527
BtgI	CCRYGG	1 cut(s)	580
BtsI	GCAGTG	1 cut(s)	1324
BtsIMutI	CAGTG	2 cut(s)	1324, 2258
BveI	ACCTGC	1 cut(s)	1269
Cac8I	GCNNGC	3 cut(s)	68, 1266, 2474
CaiI	CAGNNNCTG	3 cut(s)	1103, 1261, 1514
CciI	TCATGA	2 cut(s)	991, 1813
CfoI	GCGC	5 cut(s)	98, 763, 975, 1194, 1807
Cfr10I	RCCGGY	1 cut(s)	270
Cfr13I	GGNCC	5 cut(s)	119, 545, 1600, 1601, 2483
CseI	GACGC	3 cut(s)	110, 1109, 2057
CsiI	ACCWGGT	2 cut(s)	870, 1360
Csp6I	GTAC	4 cut(s)	229, 1230, 1780, 2264
CspCI	CAANNNNNGTGG	4 cut(s)	1186, 1221, 2599, 2634
CviQI	GTAC	4 cut(s)	229, 1230, 1780, 2264
DdeI	CTNAG	7 cut(s)	339, 507, 605, 1269, 1453, 2127, 2697
DinI	GGCGCC	1 cut(s)	762
DpnI	GATC	8 cut(s)	672, 709, 799, 1022, 1095, 1633, 2094, 2607
DpnII	GATC	8 cut(s)	670, 707, 797, 1020, 1093, 1631, 2092, 2605
EaeI	YGGCCR	2 cut(s)	211, 963
Eam1104I	CTCTTC	6 cut(s)	228, 458, 989, 1539, 2318, 2534
EarI	CTCTTC	6 cut(s)	228, 458, 989, 1539, 2318, 2534
EciI	GGCGGA	3 cut(s)	54, 215, 2417
Ecl136II	GAGCTC	1 cut(s)	2516
Eco130I	CCWWGG	1 cut(s)	580
Eco24I	GRGCYC	3 cut(s)	1604, 1737, 2518
Eco31I	GGTCTC	2 cut(s)	939, 2536
Eco47I	GGWCC	1 cut(s)	2483
Eco53kI	GAGCTC	1 cut(s)	2516
Eco57I	CTGAAG	5 cut(s)	1536, 1899, 1904, 2073, 2550
Eco88I	CYCGRG	4 cut(s)	293, 500, 1233, 2567
EcoICRI	GAGCTC	1 cut(s)	2516
EcoO109I	RGGNCCY	4 cut(s)	119, 545, 1601, 2483
EcoRI	GAATTC	2 cut(s)	1288, 2489
EcoRII	CCWGG	5 cut(s)	870, 1360, 1876, 2239, 2478
EcoT14I	CCWWGG	1 cut(s)	580
EcoT22I	ATGCAT	1 cut(s)	1354
EcoT38I	GRGCYC	3 cut(s)	1604, 1737, 2518
EgeI	GGCGCC	1 cut(s)	762
EheI	GGCGCC	1 cut(s)	762
ErhI	CCWWGG	1 cut(s)	580
FalI	AAGNNNNNCTT	8 cut(s)	1141, 1173, 1512, 1544, 2264, 2296, 2322, 2354
FaqI	GGGAC	1 cut(s)	230
FauNDI	CATATG	1 cut(s)	700
FblI	GTMKAC	1 cut(s)	1973
FriOI	GRGCYC	3 cut(s)	1604, 1737, 2518
FspBI	CTAG	3 cut(s)	825, 1377, 2072
FspI	TGCGCA	1 cut(s)	974
GlaI	GCGC	5 cut(s)	97, 762, 974, 1193, 1806
GsaI	CCCAGC	1 cut(s)	2248
GsuI	CTGGAG	3 cut(s)	390, 633, 1632
HaeII	RGCGCY	1 cut(s)	764
HaeIII	GGCC	6 cut(s)	120, 213, 547, 965, 1602, 2527
HapII	CCGG	8 cut(s)	72, 214, 245, 271, 281, 443, 1985, 2547
HgaI	GACGC	3 cut(s)	110, 1109, 2057
HhaI	GCGC	5 cut(s)	98, 763, 975, 1194, 1807
Hin1I	GRCGYC	1 cut(s)	761
Hin6I	GCGC	5 cut(s)	96, 761, 973, 1192, 1805
HinP1I	GCGC	5 cut(s)	96, 761, 973, 1192, 1805
HincII	GTYRAC	1 cut(s)	1792
HindII	GTYRAC	1 cut(s)	1792
HpaII	CCGG	8 cut(s)	72, 214, 245, 271, 281, 443, 1985, 2547
HphI	GGTGA	7 cut(s)	395, 551, 878, 1350, 1871, 2593, 2701
Hpy166II	GTNNAC	4 cut(s)	1185, 1792, 1974, 2256
Hpy8I	GTNNAC	4 cut(s)	1185, 1792, 1974, 2256
HpyCH4III	ACNGT	3 cut(s)	899, 1304, 1328
HpyCH4IV	ACGT	4 cut(s)	135, 1417, 2020, 2368
HpyF3I	CTNAG	7 cut(s)	339, 507, 605, 1269, 1453, 2127, 2697
HpySE526I	ACGT	4 cut(s)	135, 1417, 2020, 2368
Hsp92I	GRCGYC	1 cut(s)	761
HspAI	GCGC	5 cut(s)	96, 761, 973, 1192, 1805
KasI	GGCGCC	1 cut(s)	760
Kpn2I	TCCGGA	1 cut(s)	1984
Kzo9I	GATC	8 cut(s)	670, 707, 797, 1020, 1093, 1631, 2092, 2605
LguI	GCTCTTC	1 cut(s)	1539
LmnI	GCTCC	6 cut(s)	238, 658, 1181, 1651, 1732, 2513
LweI	GCATC	8 cut(s)	871, 1203, 1339, 1945, 2058, 2283, 2302, 2344
MabI	ACCWGGT	2 cut(s)	870, 1360
MaeI	CTAG	3 cut(s)	825, 1377, 2072
MaeII	ACGT	4 cut(s)	135, 1417, 2020, 2368
MaeIII	GTNAC	4 cut(s)	1467, 2045, 2648, 2680
MalI	GATC	8 cut(s)	672, 709, 799, 1022, 1095, 1633, 2094, 2607
MbiI	CCGCTC	2 cut(s)	1999, 2566
MboI	GATC	8 cut(s)	670, 707, 797, 1020, 1093, 1631, 2092, 2605
MflI	RGATCY	3 cut(s)	1093, 1631, 2092
MhlI	GDGCHC	4 cut(s)	1449, 1604, 1737, 2518
MlsI	TGGCCA	1 cut(s)	965
MluNI	TGGCCA	1 cut(s)	965
Mly113I	GGCGCC	1 cut(s)	761
MlyI	GAGTC	2 cut(s)	512, 2251
MmeI	TCCRAC	3 cut(s)	1545, 2370, 2491
Mox20I	TGGCCA	1 cut(s)	965
Mph1103I	ATGCAT	1 cut(s)	1354
MroI	TCCGGA	1 cut(s)	1984
MroXI	GAANNNNTTC	1 cut(s)	564
MscI	TGGCCA	1 cut(s)	965
MseI	TTAA	7 cut(s)	161, 744, 876, 917, 2340, 2364, 2520
MslI	CAYNNNNRTG	3 cut(s)	1263, 2310, 2471
Msp20I	TGGCCA	1 cut(s)	965
MspA1I	CMGCKG	3 cut(s)	1273, 1511, 2153
MspI	CCGG	8 cut(s)	72, 214, 245, 271, 281, 443, 1985, 2547
Mva1269I	GAATGC	1 cut(s)	2466
MvaI	CCWGG	5 cut(s)	872, 1362, 1878, 2241, 2480
MvnI	CGCG	1 cut(s)	98
NarI	GGCGCC	1 cut(s)	761
NciI	CCSGG	5 cut(s)	72, 215, 281, 443, 2547
NcoI	CCATGG	1 cut(s)	580
NdeI	CATATG	1 cut(s)	700
NdeII	GATC	8 cut(s)	670, 707, 797, 1020, 1093, 1631, 2092, 2605
NlaIV	GGNNCC	7 cut(s)	735, 762, 1095, 1602, 1647, 1734, 2484
NmuCI	GTSAC	2 cut(s)	2045, 2680
NsbI	TGCGCA	1 cut(s)	974
NsiI	ATGCAT	1 cut(s)	1354
NspI	RCATGY	3 cut(s)	1268, 1376, 2476
PaeI	GCATGC	2 cut(s)	1268, 2476
PaeR7I	CTCGAG	2 cut(s)	293, 2567
PagI	TCATGA	2 cut(s)	991, 1813
PaqCI	CACCTGC	1 cut(s)	1269
PasI	CCCWGGG	1 cut(s)	2479
PciSI	GCTCTTC	1 cut(s)	1539
PcsI	WCGNNNNNNNCGW	2 cut(s)	282, 291
PctI	GAATGC	1 cut(s)	2466
PdmI	GAANNNNTTC	1 cut(s)	564
PflFI	GACNNNGTC	1 cut(s)	281
PleI	GAGTC	2 cut(s)	511, 2251
PluTI	GGCGCC	1 cut(s)	764
PpsI	GAGTC	2 cut(s)	511, 2251
Ppu21I	YACGTR	1 cut(s)	1418
PpuMI	RGGWCCY	1 cut(s)	2483
PsiI	TTATAA	1 cut(s)	2558
Psp124BI	GAGCTC	1 cut(s)	2518
Psp1406I	AACGTT	1 cut(s)	135
Psp5II	RGGWCCY	1 cut(s)	2483
Psp6I	CCWGG	5 cut(s)	870, 1360, 1876, 2239, 2478
PspFI	CCCAGC	1 cut(s)	2244
PspGI	CCWGG	5 cut(s)	870, 1360, 1876, 2239, 2478
PspN4I	GGNNCC	7 cut(s)	735, 762, 1095, 1602, 1647, 1734, 2484
PspOMI	GGGCCC	1 cut(s)	1600
PspPI	GGNCC	5 cut(s)	119, 545, 1600, 1601, 2483
PspPPI	RGGWCCY	1 cut(s)	2483
PspXI	VCTCGAGB	2 cut(s)	293, 2567
PstNI	CAGNNNCTG	3 cut(s)	1103, 1261, 1514
PsuI	RGATCY	3 cut(s)	1093, 1631, 2092
PsyI	GACNNNGTC	1 cut(s)	281
PvuII	CAGCTG	2 cut(s)	1273, 1511
RsaI	GTAC	4 cut(s)	230, 1231, 1781, 2265
RsaNI	GTAC	4 cut(s)	229, 1230, 1780, 2264
RseI	CAYNNNNRTG	3 cut(s)	1263, 2310, 2471
SacI	GAGCTC	1 cut(s)	2518
SapI	GCTCTTC	1 cut(s)	1539
SaqAI	TTAA	7 cut(s)	161, 744, 876, 917, 2340, 2364, 2520
Sau3AI	GATC	8 cut(s)	670, 707, 797, 1020, 1093, 1631, 2092, 2605
Sau96I	GGNCC	5 cut(s)	119, 545, 1600, 1601, 2483
SchI	GAGTC	2 cut(s)	512, 2251
SduI	GDGCHC	4 cut(s)	1449, 1604, 1737, 2518
SexAI	ACCWGGT	2 cut(s)	870, 1360
SfaNI	GCATC	8 cut(s)	871, 1203, 1339, 1945, 2058, 2283, 2302, 2344
SfcI	CTRYAG	1 cut(s)	1242
SfoI	GGCGCC	1 cut(s)	762
Sfr274I	CTCGAG	2 cut(s)	293, 2567
SinI	GGWCC	1 cut(s)	2483
SlaI	CTCGAG	2 cut(s)	293, 2567
SmiMI	CAYNNNNRTG	3 cut(s)	1263, 2310, 2471
SmlI	CTYRAG	5 cut(s)	293, 2121, 2567, 2589, 2702
SmoI	CTYRAG	5 cut(s)	293, 2121, 2567, 2589, 2702
SphI	GCATGC	2 cut(s)	1268, 2476
SspDI	GGCGCC	1 cut(s)	760
SspMI	CTAG	3 cut(s)	825, 1377, 2072
SstI	GAGCTC	1 cut(s)	2518
StyI	CCWWGG	1 cut(s)	580
TaaI	ACNGT	3 cut(s)	899, 1304, 1328
TaiI	ACGT	4 cut(s)	138, 1420, 2023, 2371
TaqI	TCGA	8 cut(s)	153, 171, 276, 285, 294, 958, 1755, 2568
TatI	WGTACW	2 cut(s)	1779, 2263
TauI	GCSGC	4 cut(s)	36, 39, 78, 2667
Tru1I	TTAA	7 cut(s)	161, 744, 876, 917, 2340, 2364, 2520
Tru9I	TTAA	7 cut(s)	161, 744, 876, 917, 2340, 2364, 2520
TscAI	CASTG	2 cut(s)	1324, 2258
TseFI	GTSAC	2 cut(s)	2045, 2680
Tsp45I	GTSAC	2 cut(s)	2045, 2680
TspGWI	ACGGA	4 cut(s)	628, 728, 919, 977
TspRI	CASTG	2 cut(s)	1324, 2258
Tth111I	GACNNNGTC	1 cut(s)	281
VpaK11BI	GGWCC	1 cut(s)	2483
XapI	RAATTY	6 cut(s)	314, 833, 1288, 2008, 2171, 2489
XceI	RCATGY	3 cut(s)	1268, 1376, 2476
XcmI	CCANNNNNNNNNTGG	1 cut(s)	587
XhoI	CTCGAG	2 cut(s)	293, 2567
XmiI	GTMKAC	1 cut(s)	1973
XmnI	GAANNNNTTC	1 cut(s)	564
XspI	CTAG	3 cut(s)	825, 1377, 2072
Zsp2I	ATGCAT	1 cut(s)	1354

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.