Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0007235

Physical Location & Seq

Genomic Coordinates Reverse (-)

36740788 .. 36745755

Gene Structure 4968 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1289000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2724 bp

ATGGCGCAGACGAAGCGAAAATCCAGGGACGGTGGCGGCGGAGACAAGGCAAAGGGAAAGAGAGGCAAGCCCGGCGGCAAGAAGCAGAAAGGCGCCGATGCAAGAGATAGAAAAGGCCCTCGTTTGCCCAACGTTCTCCGAAAGGAGGTCGAACGCTTAAACCCTATCGAAGATGAAGAGATTGATTCCGATGAGGCGGAGGTTTATGGCCGGGACTTTTACGAGTACGAAGAGGAGCTACCGGAGGAGGAGAAAAGGAAGAACCGCCGGTTCGACCCGGTCGAGAACCTCGAGTACCAGCTTCCTGAAGAATTTGAGGATGAAAATGTGTCATCTGATGATGATGACAATGACATGGGGGACGCTGGAGAGGGTGGGGGTGAAGATGATGATGATGATGATGATGATGATGGAAGGCAAGGAATCACACGAATTCTGGCTTTTGAAGGGAAGAAGAGGAGGAATACCAATGTTGTTGTATCAGAGGCATATCCCGAGTCTGAGTATAACCCTACTCGTGATACTTTGGATGGTGAAGGGCCCGTTAGTATTGAAGACCTTCTGAATCCTCTCCACGGAAAATCTGGTTATAGCAAACTGAGAAAGAGAATACATCATCTTGAAAAGAAATCCGTTCCTACTCCAGCTCCACTTCCAAAAGCAGACCAAGAGAAATTGGAGAGGATGGCAGCACATGAAAAATCAAAGGAAGAACTGCGAAAGTGGGAACCAATCATTAAGAGGAACAGGGAGGCGCCTACCATATATTTTGATGATGATATGGATTTACGATCTTCAAGGGCATCTGATTTCAAACCTAGAACTGAATTTGAGAAGAAAATTGCTTCATTAGTTTATGATGAGCAGGTTAAAGATGCTCACCTAAAGGACGGTTCAAGGCTTCTTGAATTAAATAAGGTATCTGCTGAAGATGAAAGAGACCGCCATAATCGAATGGCCAAAATGCGCAGCCTTCTCTTCCGTCATGAAATGAAGTCAAAGCACATAAAAAAGATCAAATCCAAAACTTATCATCGTTTGTTGAAGAAAGATAGATTGAAAGCAACATCTGCACAAGGTCAAATGGATCCAGACGCTGCTAAAGAACTTGCAATGAAGCAAGAGTATGAACGAGCAAAGGAAAGAATGACTCTGAGGCATAAAGGTACCTCCAAGTGGACAAAGCGCATCAAAGAGCGTGGTATAGATGTCCAAGATGAAGGTACTCGGGCTGCTATAGCTGAACAGCAGCACCTGCATGCTCAGCTGACAAGAAAAATGAATTCAATGAAAGATGGTAGCAGCAGCAGCAGCAGTGATGACAGTAGTGATGAGGATGATATAGATGTATATTCACCTGGTTCAGGCCATGCTAGGGCAGCGAAGTTGTTAGAAAAAGCAAAGGAGAAGACACGTAATGTACTAAAAGATGATGATGAAGATGAAGTGCCTAACTCAGGAGTGCTTTCATTACCTTTCATGGTGCGTGGATTGAAAAAAAGGAATGAGGCAGCTGCTGAAGAAGCTAAACTTGCTCTTGAAGAGTACGAATCATGGTCAAACCCGTTGGAGGATTCAAGTGGGGCAGATAATCTGAATGTGGGCCCTCCAAGTGGTAGAATGGTCTTCAATGGATCTAAAAAGAAGGCTCCAGAATCAAGTAATAAGACCAAAACAGACAATAAAATGAGAACAGATAATTATTATGCTAACAGTGATAGTGAAGATGACTTGGAGCCCGAAGAAAATGTTGATGTCGAGAATGACAGAAGTAGTGATTTTCACAAGGATGTCAACATTAGTTCTGCGTTTCTTCATGAAGATTCTCAAAATCATAAAGATTCTCTTTTCAAGAACTTCAGTGATATTGTTCAAGAGCCAGGTCCAAGGACAACACATGAGGTTTCTATTTTTGCTTCAGGCTCATGGAAAAAGATAAAAAGTAGCAATAGTGCGGATGCAAATGGTAAAAAGTCTACTCGTCCCGTGGAATCAGTTGAGCGCAATCAAAATTTGCAAGAACCTGTGGTGGATTTGGATGAGGATAGTGATGCAGATAGCGAGGGGCAGATGGTAGATGGCATTCTTTCTTCAAATCCAAAAAATGAATACAGCCTTCCTTCTCAAGTTGAGCTAATTCGTCAAGCCTTTGCGGCGGATGATGTGGAGGATGAATTTGAGAAGGAGAAACAGGAAGTTCTGAATGAGGAAAATCCTGAACCTGAAAAGCCTACTTTACTCCCTGGCTGGGGTCAGTGGACTCATGTACAGAAAAAGAAAGGCTTACCTTCTTGGATGCAAAAAGAACACGAAGATGCCAAGAAGAAGAGAGAAGAAACCCTTAAAAAGAGGAAGGATGCCCATCTTAAACGTGTTATTATCTCTGAAAAGTTGGATAAAAAGGCGGAGAAACTTTTTACAAAAACATTACCTTACCCTTTCACATCCAAAGAAGTTTTTGAACAGAGCATTCGCATGCCCCTGGGTCCTGAATTCAACCCTGCAAGTGCGGTTGGAGCTCTTAATCGGCCTGAAGTGATGAAGAGACCTGGTGTAATTATAAGACCGGTCGAGTTTGAGGAGGTGAATCCTCAAGGAAAAGTAGAGGATCACAAACAGATTGGAAAGAAACAGAAAAAGAGGAATCAGAGTAATAAGAGTAATAATAGTAAAAGTGGCAGCGACAAAATTGTGACAAAGGTGAAGACTAAGCTCAAGAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000154 GO:0000447 GO:0000460 GO:0000462 GO:0000466 GO:0000469 GO:0000472 GO:0000478 GO:0000479 GO:0000480 GO:0000966 GO:0000967 GO:0001510 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0030490 GO:0030684 GO:0031167 GO:0031974 GO:0031981 GO:0032040 GO:0032259 GO:0032991 GO:0034470 GO:0034471 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

Utp14

Protein Analysis

908

Amino Acids

103.17

Weight (kDa)

5.86

Isoelectric Point (pI)

48.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Utp14	PF04615	147 - 859	7.4e-170	Utp14 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007235)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02400 AT5G08600 AT5G08600 AT5G08600 AT5G36980
fragaria_vesca	FvH4_2g25830 FvH4_2g25830 FvH4_2g25830 FvH4_2g25830 FvH4_2g25830
malus_domestica	MD03G1289000.v1.1 MD11G1308900.v1.1
prunus_persica	Prupe.8G262300_v2.0.a1 Prupe.8G262300_v2.0.a1
pyrus_communis	pycom03g22910
rosa_chinensis	RchiOBHm_Chr6g0294141
rosa_laevigata	RLG00000011895
rosa_multiflora	Rmu_sc0005037.1_g000007
rosa_roxburghii	Rroxscaffold_7G00173610
rosa_rugosa	Rorug06G0241800
rosa_samantha	Rh6AG354200 Rh6BG361100 Rh6CG368400 Rh6DG355200
rosa_wichuraiana	Rw6G030870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2561
AarI	CACCTGC	1 cut(s)	1263
Acc16I	TGCGCA	1 cut(s)	968
Acc36I	ACCTGC	2 cut(s)	856, 1263
Acc65I	GGTACC	1 cut(s)	1166
AccB1I	GGYRCC	3 cut(s)	92, 754, 1166
AccI	GTMKAC	1 cut(s)	1976
AclI	AACGTT	1 cut(s)	132
AclWI	GGATC	4 cut(s)	1082, 1095, 1642, 2616
AcoI	YGGCCR	2 cut(s)	208, 957
AcsI	RAATTY	7 cut(s)	311, 432, 827, 1282, 2011, 2174, 2492
AcuI	CTGAAG	6 cut(s)	327, 948, 1539, 1843, 1902, 2553
AcyI	GRCGYC	2 cut(s)	93, 755
AfaI	GTAC	7 cut(s)	227, 296, 1168, 1225, 1422, 1547, 2268
AflIII	ACRYGT	2 cut(s)	1412, 2371
AgeI	ACCGGT	1 cut(s)	2566
AjnI	CCWGG	6 cut(s)	23, 1357, 1879, 2242, 2481, 2548
Alw21I	GWGCWC	1 cut(s)	2521
Alw26I	GTCTC	3 cut(s)	36, 933, 2539
AlwI	GGATC	4 cut(s)	1082, 1095, 1642, 2616
AlwNI	CAGNNNCTG	3 cut(s)	1097, 1255, 1517
Ama87I	CYCGRG	3 cut(s)	290, 494, 1227
AoxI	GGCC	7 cut(s)	115, 208, 539, 957, 1366, 1603, 2528
ApaI	GGGCCC	2 cut(s)	543, 1607
ApoI	RAATTY	7 cut(s)	311, 432, 827, 1282, 2011, 2174, 2492
AsiGI	ACCGGT	1 cut(s)	2566
Asp700I	GAANNNNTTC	1 cut(s)	558
Asp718I	GGTACC	1 cut(s)	1166
AspLEI	GCGC	6 cut(s)	7, 95, 757, 969, 1188, 2004
AspS9I	GGNCC	7 cut(s)	116, 539, 540, 1603, 1604, 1883, 2486
AsuC2I	CCSGG	3 cut(s)	72, 212, 278
AsuHPI	GGTGA	6 cut(s)	392, 545, 872, 1347, 2596, 2713
AvaI	CYCGRG	3 cut(s)	290, 494, 1227
AvaII	GGWCC	2 cut(s)	1883, 2486
BaeGI	GKGCMC	2 cut(s)	543, 1607
BalI	TGGCCA	1 cut(s)	959
BamHI	GGATCC	1 cut(s)	1087
BanI	GGYRCC	3 cut(s)	92, 754, 1166
BanII	GRGCYC	4 cut(s)	543, 1607, 1740, 2521
BarI	GAAGNNNNNNTAC	2 cut(s)	222, 254
BauI	CACGAG	1 cut(s)	516
BbsI	GAAGAC	4 cut(s)	561, 1415, 1618, 2711
Bbv12I	GWGCWC	1 cut(s)	2521
BccI	CCATC	7 cut(s)	404, 524, 679, 1289, 2065, 2072, 2370
BciT130I	CCWGG	6 cut(s)	25, 1359, 1881, 2244, 2483, 2550
BcnI	CCSGG	3 cut(s)	72, 212, 278
BcoDI	GTCTC	3 cut(s)	36, 933, 2539
BfaI	CTAG	2 cut(s)	819, 1374
BfmI	CTRYAG	1 cut(s)	1236
BfoI	RGCGCY	2 cut(s)	96, 758
BfuAI	ACCTGC	2 cut(s)	856, 1263
BglI	GCCNNNNNGGC	1 cut(s)	2153
BlpI	GCTNAGC	1 cut(s)	1263
Bme1390I	CCNGG	9 cut(s)	25, 72, 212, 278, 1359, 1881, 2244, 2483, 2550
Bme18I	GGWCC	2 cut(s)	1883, 2486
BmeT110I	CYCGRG	3 cut(s)	290, 494, 1227
BmgT120I	GGNCC	7 cut(s)	116, 539, 540, 1603, 1604, 1883, 2486
BmrFI	CCNGG	9 cut(s)	25, 72, 212, 278, 1359, 1881, 2244, 2483, 2550
BmsI	GCATC	9 cut(s)	88, 812, 865, 1197, 1948, 2041, 2286, 2305, 2347
BpiI	GAAGAC	4 cut(s)	561, 1415, 1618, 2711
BpmI	CTGGAG	3 cut(s)	387, 627, 1635
Bpu1102I	GCTNAGC	1 cut(s)	1263
BpuEI	CTTGAG	3 cut(s)	2109, 2577, 2699
BpuMI	CCSGG	3 cut(s)	72, 212, 278
BsaAI	YACGTR	1 cut(s)	1415
BsaBI	GATNNNNATC	1 cut(s)	2361
BsaHI	GRCGYC	2 cut(s)	93, 755
BsaI	GGTCTC	2 cut(s)	933, 2539
BsaJI	CCNNGG	7 cut(s)	24, 574, 1886, 1986, 2242, 2481, 2482
BsaWI	WCCGGW	2 cut(s)	241, 2566
BsaXI	ACNNNNNCTCC	2 cut(s)	631, 661
Bse118I	RCCGGY	2 cut(s)	267, 2566
Bse3DI	GCAATG	1 cut(s)	1119
Bse8I	GATNNNNATC	1 cut(s)	2361
BseBI	CCWGG	6 cut(s)	25, 1359, 1881, 2244, 2483, 2550
BseDI	CCNNGG	7 cut(s)	24, 574, 1886, 1986, 2242, 2481, 2482
BseJI	GATNNNNATC	1 cut(s)	2361
BseMI	GCAATG	1 cut(s)	1119
BseMII	CTCAG	5 cut(s)	492, 590, 1145, 1277, 1470
BseRI	GAGGAG	5 cut(s)	248, 260, 263, 472, 2594
BseSI	GKGCMC	2 cut(s)	543, 1607
BseYI	CCCAGC	1 cut(s)	2247
BsgI	GTGCAG	1 cut(s)	1056
Bsh1285I	CGRYCG	2 cut(s)	282, 2571
BshFI	GGCC	7 cut(s)	117, 210, 541, 959, 1368, 1605, 2530
BshNI	GGYRCC	3 cut(s)	92, 754, 1166
BshTI	ACCGGT	1 cut(s)	2566
BsiEI	CGRYCG	2 cut(s)	282, 2571
BsiHKAI	GWGCWC	1 cut(s)	2521
BsiHKCI	CYCGRG	3 cut(s)	290, 494, 1227
BsiSI	CCGG	6 cut(s)	72, 211, 242, 268, 278, 2567
BslFI	GGGAC	4 cut(s)	41, 227, 374, 1968
BsmAI	GTCTC	3 cut(s)	36, 933, 2539
BsmFI	GGGAC	4 cut(s)	41, 227, 374, 1968
BsmI	GAATGC	2 cut(s)	2082, 2469
BsnI	GGCC	7 cut(s)	117, 210, 541, 959, 1368, 1605, 2530
Bso31I	GGTCTC	2 cut(s)	933, 2539
BsoBI	CYCGRG	3 cut(s)	290, 494, 1227
Bsp120I	GGGCCC	2 cut(s)	539, 1603
Bsp1286I	GDGCHC	4 cut(s)	543, 1607, 1740, 2521
Bsp1407I	TGTACA	1 cut(s)	2266
Bsp143I	GATC	5 cut(s)	791, 1014, 1087, 1634, 2608
Bsp1720I	GCTNAGC	1 cut(s)	1263
BspANI	GGCC	7 cut(s)	117, 210, 541, 959, 1368, 1605, 2530
BspCNI	CTCAG	5 cut(s)	493, 591, 1146, 1276, 1469
BspHI	TCATGA	2 cut(s)	985, 1816
BspMI	ACCTGC	2 cut(s)	856, 1263
BspPI	GGATC	4 cut(s)	1082, 1095, 1642, 2616
BspT107I	GGYRCC	3 cut(s)	92, 754, 1166
BspTNI	GGTCTC	2 cut(s)	933, 2539
BsrDI	GCAATG	1 cut(s)	1119
BsrFI	RCCGGY	2 cut(s)	267, 2566
BsrGI	TGTACA	1 cut(s)	2266
BssAI	RCCGGY	2 cut(s)	267, 2566
BssECI	CCNNGG	7 cut(s)	24, 574, 1886, 1986, 2242, 2481, 2482
BssMI	GATC	5 cut(s)	791, 1014, 1087, 1634, 2608
BssNI	GRCGYC	2 cut(s)	93, 755
BssSI	CACGAG	1 cut(s)	516
BssT1I	CCWWGG	1 cut(s)	1886
Bst2BI	CACGAG	1 cut(s)	516
Bst2UI	CCWGG	6 cut(s)	25, 1359, 1881, 2244, 2483, 2550
Bst4CI	ACNGT	4 cut(s)	32, 893, 1325, 1715
Bst6I	CTCTTC	7 cut(s)	171, 225, 449, 983, 1536, 2321, 2537
BstACI	GRCGYC	2 cut(s)	93, 755
BstAPI	GCANNNNNTGC	2 cut(s)	1070, 1255
BstAUI	TGTACA	1 cut(s)	2266
BstBAI	YACGTR	1 cut(s)	1415
BstC8I	GCNNGC	3 cut(s)	68, 1260, 2477
BstDEI	CTNAG	6 cut(s)	501, 599, 1154, 1263, 1456, 2709
BstDSI	CCRYGG	2 cut(s)	574, 1986
BstENI	CCTNNNNNAGG	2 cut(s)	1362, 1455
BstH2I	RGCGCY	2 cut(s)	96, 758
BstHHI	GCGC	6 cut(s)	7, 95, 757, 969, 1188, 2004
BstKTI	GATC	5 cut(s)	794, 1017, 1090, 1637, 2611
BstMAI	GTCTC	3 cut(s)	36, 933, 2539
BstMBI	GATC	5 cut(s)	791, 1014, 1087, 1634, 2608
BstMCI	CGRYCG	2 cut(s)	282, 2571
BstNI	CCWGG	6 cut(s)	25, 1359, 1881, 2244, 2483, 2550
BstNSI	RCATGY	2 cut(s)	1262, 2479
BstSCI	CCNGG	9 cut(s)	23, 70, 210, 276, 1357, 1879, 2242, 2481, 2548
BstSFI	CTRYAG	1 cut(s)	1236
BstSLI	GKGCMC	2 cut(s)	543, 1607
BstV2I	GAAGAC	4 cut(s)	561, 1415, 1618, 2711
BstX2I	RGATCY	2 cut(s)	1087, 1634
BstYI	RGATCY	2 cut(s)	1087, 1634
BsuRI	GGCC	7 cut(s)	117, 210, 541, 959, 1368, 1605, 2530
BtgI	CCRYGG	2 cut(s)	574, 1986
BtsI	GCAGTG	1 cut(s)	1321
BtsIMutI	CAGTG	4 cut(s)	1321, 1720, 1867, 2261
BveI	ACCTGC	2 cut(s)	856, 1263
Cac8I	GCNNGC	3 cut(s)	68, 1260, 2477
CaiI	CAGNNNCTG	3 cut(s)	1097, 1255, 1517
CciI	TCATGA	2 cut(s)	985, 1816
CfoI	GCGC	6 cut(s)	7, 95, 757, 969, 1188, 2004
Cfr10I	RCCGGY	2 cut(s)	267, 2566
Cfr13I	GGNCC	7 cut(s)	116, 539, 540, 1603, 1604, 1883, 2486
CseI	GACGC	2 cut(s)	371, 1103
CsiI	ACCWGGT	2 cut(s)	1357, 2548
Csp6I	GTAC	7 cut(s)	226, 295, 1167, 1224, 1421, 1546, 2267
CspAI	ACCGGT	1 cut(s)	2566
CspCI	CAANNNNNGTGG	2 cut(s)	1180, 1215
CviQI	GTAC	7 cut(s)	226, 295, 1167, 1224, 1421, 1546, 2267
DdeI	CTNAG	6 cut(s)	501, 599, 1154, 1263, 1456, 2709
DinI	GGCGCC	2 cut(s)	94, 756
DpnI	GATC	5 cut(s)	793, 1016, 1089, 1636, 2610
DpnII	GATC	5 cut(s)	791, 1014, 1087, 1634, 2608
EaeI	YGGCCR	2 cut(s)	208, 957
Eam1104I	CTCTTC	7 cut(s)	171, 225, 449, 983, 1536, 2321, 2537
EarI	CTCTTC	7 cut(s)	171, 225, 449, 983, 1536, 2321, 2537
EciI	GGCGGA	4 cut(s)	54, 212, 2171, 2420
Ecl136II	GAGCTC	1 cut(s)	2519
Eco130I	CCWWGG	1 cut(s)	1886
Eco24I	GRGCYC	4 cut(s)	543, 1607, 1740, 2521
Eco31I	GGTCTC	2 cut(s)	933, 2539
Eco47I	GGWCC	2 cut(s)	1883, 2486
Eco53kI	GAGCTC	1 cut(s)	2519
Eco57I	CTGAAG	6 cut(s)	327, 948, 1539, 1843, 1902, 2553
Eco88I	CYCGRG	3 cut(s)	290, 494, 1227
EcoICRI	GAGCTC	1 cut(s)	2519
EcoNI	CCTNNNNNAGG	2 cut(s)	1362, 1455
EcoO109I	RGGNCCY	4 cut(s)	116, 539, 1604, 2486
EcoRI	GAATTC	3 cut(s)	432, 1282, 2492
EcoRII	CCWGG	6 cut(s)	23, 1357, 1879, 2242, 2481, 2548
EcoT14I	CCWWGG	1 cut(s)	1886
EcoT38I	GRGCYC	4 cut(s)	543, 1607, 1740, 2521
EgeI	GGCGCC	2 cut(s)	94, 756
EheI	GGCGCC	2 cut(s)	94, 756
ErhI	CCWWGG	1 cut(s)	1886
FalI	AAGNNNNNCTT	8 cut(s)	1515, 1547, 1830, 1862, 2267, 2299, 2325, 2357
FaqI	GGGAC	4 cut(s)	41, 227, 374, 1968
FblI	GTMKAC	1 cut(s)	1976
FriOI	GRGCYC	4 cut(s)	543, 1607, 1740, 2521
FspBI	CTAG	2 cut(s)	819, 1374
FspI	TGCGCA	1 cut(s)	968
GlaI	GCGC	6 cut(s)	6, 94, 756, 968, 1187, 2003
GsaI	CCCAGC	1 cut(s)	2251
GsuI	CTGGAG	3 cut(s)	387, 627, 1635
HaeII	RGCGCY	2 cut(s)	96, 758
HaeIII	GGCC	7 cut(s)	117, 210, 541, 959, 1368, 1605, 2530
HapII	CCGG	6 cut(s)	72, 211, 242, 268, 278, 2567
HgaI	GACGC	2 cut(s)	371, 1103
HhaI	GCGC	6 cut(s)	7, 95, 757, 969, 1188, 2004
Hin1I	GRCGYC	2 cut(s)	93, 755
Hin6I	GCGC	6 cut(s)	5, 93, 755, 967, 1186, 2002
HinP1I	GCGC	6 cut(s)	5, 93, 755, 967, 1186, 2002
HincII	GTYRAC	1 cut(s)	1795
HindII	GTYRAC	1 cut(s)	1795
HpaII	CCGG	6 cut(s)	72, 211, 242, 268, 278, 2567
HphI	GGTGA	6 cut(s)	392, 545, 872, 1347, 2596, 2713
Hpy166II	GTNNAC	4 cut(s)	1179, 1795, 1977, 2259
Hpy8I	GTNNAC	4 cut(s)	1179, 1795, 1977, 2259
HpyCH4III	ACNGT	4 cut(s)	32, 893, 1325, 1715
HpyCH4IV	ACGT	3 cut(s)	132, 1414, 2371
HpyCH4V	TGCA	9 cut(s)	101, 1073, 1112, 1258, 1961, 2017, 2054, 2299, 2504
HpyF3I	CTNAG	6 cut(s)	501, 599, 1154, 1263, 1456, 2709
HpySE526I	ACGT	3 cut(s)	132, 1414, 2371
Hsp92I	GRCGYC	2 cut(s)	93, 755
HspAI	GCGC	6 cut(s)	5, 93, 755, 967, 1186, 2002
KasI	GGCGCC	2 cut(s)	92, 754
KpnI	GGTACC	1 cut(s)	1170
Kzo9I	GATC	5 cut(s)	791, 1014, 1087, 1634, 2608
LmnI	GCTCC	5 cut(s)	235, 652, 1654, 1735, 2516
LweI	GCATC	9 cut(s)	88, 812, 865, 1197, 1948, 2041, 2286, 2305, 2347
MabI	ACCWGGT	2 cut(s)	1357, 2548
MaeI	CTAG	2 cut(s)	819, 1374
MaeII	ACGT	3 cut(s)	132, 1414, 2371
MaeIII	GTNAC	1 cut(s)	2692
MalI	GATC	5 cut(s)	793, 1016, 1089, 1636, 2610
MboI	GATC	5 cut(s)	791, 1014, 1087, 1634, 2608
MflI	RGATCY	2 cut(s)	1087, 1634
MhlI	GDGCHC	4 cut(s)	543, 1607, 1740, 2521
MlsI	TGGCCA	1 cut(s)	959
MluNI	TGGCCA	1 cut(s)	959
Mly113I	GGCGCC	2 cut(s)	93, 755
MlyI	GAGTC	3 cut(s)	506, 1144, 2254
MmeI	TCCRAC	3 cut(s)	1548, 2373, 2494
Mox20I	TGGCCA	1 cut(s)	959
MroXI	GAANNNNTTC	1 cut(s)	558
MscI	TGGCCA	1 cut(s)	959
MseI	TTAA	7 cut(s)	158, 738, 870, 911, 2343, 2367, 2523
MslI	CAYNNNNRTG	4 cut(s)	1257, 1788, 2313, 2474
Msp20I	TGGCCA	1 cut(s)	959
MspA1I	CMGCKG	2 cut(s)	1267, 1514
MspI	CCGG	6 cut(s)	72, 211, 242, 268, 278, 2567
MspR9I	CCNGG	9 cut(s)	25, 72, 212, 278, 1359, 1881, 2244, 2483, 2550
Mva1269I	GAATGC	2 cut(s)	2082, 2469
MvaI	CCWGG	6 cut(s)	25, 1359, 1881, 2244, 2483, 2550
NarI	GGCGCC	2 cut(s)	93, 755
NciI	CCSGG	3 cut(s)	72, 212, 278
NdeII	GATC	5 cut(s)	791, 1014, 1087, 1634, 2608
NmuCI	GTSAC	1 cut(s)	2692
NsbI	TGCGCA	1 cut(s)	968
NspI	RCATGY	2 cut(s)	1262, 2479
PaeI	GCATGC	2 cut(s)	1262, 2479
PaeR7I	CTCGAG	1 cut(s)	290
PagI	TCATGA	2 cut(s)	985, 1816
PaqCI	CACCTGC	1 cut(s)	1263
PasI	CCCWGGG	1 cut(s)	2482
PcsI	WCGNNNNNNNCGW	2 cut(s)	279, 288
PctI	GAATGC	2 cut(s)	2082, 2469
PdmI	GAANNNNTTC	1 cut(s)	558
PflFI	GACNNNGTC	1 cut(s)	278
PinAI	ACCGGT	1 cut(s)	2566
PleI	GAGTC	3 cut(s)	505, 1144, 2254
PluTI	GGCGCC	2 cut(s)	96, 758
PpsI	GAGTC	3 cut(s)	505, 1144, 2254
Ppu21I	YACGTR	1 cut(s)	1415
PpuMI	RGGWCCY	1 cut(s)	2486
PsiI	TTATAA	1 cut(s)	2561
Psp124BI	GAGCTC	1 cut(s)	2521
Psp1406I	AACGTT	1 cut(s)	132
Psp5II	RGGWCCY	1 cut(s)	2486
Psp6I	CCWGG	6 cut(s)	23, 1357, 1879, 2242, 2481, 2548
PspFI	CCCAGC	1 cut(s)	2247
PspGI	CCWGG	6 cut(s)	23, 1357, 1879, 2242, 2481, 2548
PspOMI	GGGCCC	2 cut(s)	539, 1603
PspPI	GGNCC	7 cut(s)	116, 539, 540, 1603, 1604, 1883, 2486
PspPPI	RGGWCCY	1 cut(s)	2486
PspXI	VCTCGAGB	1 cut(s)	290
PsrI	GAACNNNNNNTAC	2 cut(s)	278, 310
PstNI	CAGNNNCTG	3 cut(s)	1097, 1255, 1517
PsuI	RGATCY	2 cut(s)	1087, 1634
PsyI	GACNNNGTC	1 cut(s)	278
PvuII	CAGCTG	2 cut(s)	1267, 1514
RsaI	GTAC	7 cut(s)	227, 296, 1168, 1225, 1422, 1547, 2268
RsaNI	GTAC	7 cut(s)	226, 295, 1167, 1224, 1421, 1546, 2267
RseI	CAYNNNNRTG	4 cut(s)	1257, 1788, 2313, 2474
SacI	GAGCTC	1 cut(s)	2521
SaqAI	TTAA	7 cut(s)	158, 738, 870, 911, 2343, 2367, 2523
Sau3AI	GATC	5 cut(s)	791, 1014, 1087, 1634, 2608
Sau96I	GGNCC	7 cut(s)	116, 539, 540, 1603, 1604, 1883, 2486
SchI	GAGTC	3 cut(s)	506, 1144, 2254
ScrFI	CCNGG	9 cut(s)	25, 72, 212, 278, 1359, 1881, 2244, 2483, 2550
SduI	GDGCHC	4 cut(s)	543, 1607, 1740, 2521
SexAI	ACCWGGT	2 cut(s)	1357, 2548
SfaNI	GCATC	9 cut(s)	88, 812, 865, 1197, 1948, 2041, 2286, 2305, 2347
SfcI	CTRYAG	1 cut(s)	1236
SfoI	GGCGCC	2 cut(s)	94, 756
Sfr274I	CTCGAG	1 cut(s)	290
SinI	GGWCC	2 cut(s)	1883, 2486
SlaI	CTCGAG	1 cut(s)	290
SmiMI	CAYNNNNRTG	4 cut(s)	1257, 1788, 2313, 2474
SmlI	CTYRAG	4 cut(s)	290, 2124, 2592, 2714
SmoI	CTYRAG	4 cut(s)	290, 2124, 2592, 2714
SphI	GCATGC	2 cut(s)	1262, 2479
SspDI	GGCGCC	2 cut(s)	92, 754
SspMI	CTAG	2 cut(s)	819, 1374
SstI	GAGCTC	1 cut(s)	2521
StyD4I	CCNGG	9 cut(s)	23, 70, 210, 276, 1357, 1879, 2242, 2481, 2548
StyI	CCWWGG	1 cut(s)	1886
TaaI	ACNGT	4 cut(s)	32, 893, 1325, 1715
TaiI	ACGT	3 cut(s)	135, 1417, 2374
TaqI	TCGA	8 cut(s)	150, 168, 273, 282, 291, 952, 1758, 2571
TatI	WGTACW	2 cut(s)	1420, 2266
TauI	GCSGC	3 cut(s)	39, 78, 2156
Tru1I	TTAA	7 cut(s)	158, 738, 870, 911, 2343, 2367, 2523
Tru9I	TTAA	7 cut(s)	158, 738, 870, 911, 2343, 2367, 2523
TscAI	CASTG	4 cut(s)	1321, 1720, 1867, 2261
TseFI	GTSAC	1 cut(s)	2692
Tsp45I	GTSAC	1 cut(s)	2692
TspGWI	ACGGA	3 cut(s)	591, 622, 971
TspRI	CASTG	4 cut(s)	1321, 1720, 1867, 2261
Tth111I	GACNNNGTC	1 cut(s)	278
VpaK11BI	GGWCC	2 cut(s)	1883, 2486
XagI	CCTNNNNNAGG	2 cut(s)	1362, 1455
XapI	RAATTY	7 cut(s)	311, 432, 827, 1282, 2011, 2174, 2492
XceI	RCATGY	2 cut(s)	1262, 2479
XcmI	CCANNNNNNNNNTGG	1 cut(s)	581
XhoI	CTCGAG	1 cut(s)	290
XmiI	GTMKAC	1 cut(s)	1976
XmnI	GAANNNNTTC	1 cut(s)	558
XspI	CTAG	2 cut(s)	819, 1374

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.