Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0007235

Physical Location & Seq

Genomic Coordinates Reverse (-)

22105366 .. 22110625

Gene Structure 5260 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G262300.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2703 bp

ATGGCGGAGACGAAGCGAAAATCTAGAGGCGAGGCAAAGGGCAAGAGAGGCAAACCCAGCAAGAAGCAAAAGAAAGGCACCGATACAAGAGAAAGAAAAGGCCCTCGTTTGCCCAACGCTTTGCGAAAGGAGCTCGAACGCTTAAACCCTGTTGATGAGGGTTTTGGTTCCGACGAGGATCAGGAAGAGGTTTATGGCCGGGACTTGTATGAGTACGAAGAGGAGCTGCCGGAGGAGGAGTCCAAGAAGAACCGCCGGTACGACCCCGTCGAGAACCTCGAGTATCAGATGCCTGAGGAATTTGAGGATGAAAATGTGTCATCGGATGATGACAATGACACCAGGAACGCTGGAGAGGATGGGGTTGAGGACGAGGACGAGAAGGATGATGATGGAAGGCAAAGAACCACACGAATTACAAGTGAAGCTTTTGAAGGGAAGAAGAAGAAGAAAAATAATGTTGTTATATCAGAGGCGTATCCCGAGTCTGAGTATAACCCTACCCGTGATATGTTGGAGGGTGAAGGACCCGTTAGCATTGGAGACCTTCTGGACCCTCTCCATGGAGTATCTGGTTATAGCAAACTTAGAAAGAGAATACATCATTTGGAAAAGAAATCTGTTCCTACTCCTGCTCCGCTTCCAAAGGCAGATCAAGAGAAATTGGAGAGGAAAGCAGCCTATGAAAAATCAAAGGAAGAGTTGCAGAAGTGGGAGCCAATCATTAAGAGAAACAGGGAGGCGCCTACCATATATTTTGACGATGATATGGATTTGGGGTTTTCAACTGTGGGAGCAATAGCTTCTGAATTTGAACCAAGAACAGAATTTGAGAAGAAAATTGCTTCATTAGTTTATGACGACCAGGTTATGGAGGCTCACCAAAAAGATGGGTCAAGGCTTCTTGAATTAAATAAGGTATCAGCTGAAGATGAAAAGGACCGCCATAATCGAATGGCCAAAATGCGCAGCCTTCTCTTCCGTCATGAAATGAAGTCAAAACACATAAAAAAGATCAAATCCAAAACATATCATCGTCTGTTGAAGAAAGATAGATTGAAGGCATCATCTACACAAAGTCAAATGGATCCAGAAGCTGCTAAAGAACTCGCAATGAAGCAAGAGTATGAGAGAGCAAAGGAACGAATGACTCTGAGGCACAAAGGTAGCTCCAAGTGGACCAAGCGCATCAAAGAGCGTGGTATAGATGTCCAAGATGAAGGAACTCGGACTGCGATTGCTGAACAGCAGCACCTGCATGCTCTGCTAACAAGAAAAATGAATTCTATGAAAGATGGTAGTAGCAGTAGCAGTGATGACAGTAGTGATGAGGATGATGTAGATGTATATTCAGCTGGTTCAGATCAGGCTAGGGCATCAAAGTTGTTAGAAAAAGCAAAGGAGAAGACACTTAACTTGTTGGATGAAGATGATGAAGTGCCTAAATCAGGAGTGCTTTCATTACCTTTTATGGTACGTGGATTGAAAAAAAGGAATGAGGCAGCTGCTGAAGAAGCTAAACTTGCTCTTCAAGAGTATGAGTCATGGTCAAATCAGTTGGAGGATTCAAATGGGGCAGATAATGCAAAAGTGGCCCCTCCAAGTGGTAGAATGGTCTTCAATGCATCCAAGAAGGAGGCTCCAGAATCAAGTAATAAGACCCAATCAGATAATAAGATTAGATCAGATAATTATTATGGTAATAGTGATAGTGAAGATGACTTCGAGCCCAAAGAAAATGTTGATATCAGGGAAGACAGAAGTAGTGATTTGCAGAACAATGGCGGCATTAATCCTGTCTTACTTCATAAGGAATTTAAAAATCATAAGGATTCTCTTTTCAAGAACTTCGATGATATTGTTCAAGACCCAGGTCCGAAGACAACACATGAGGTTTCTATTTTTGCTTCAGGCACATGGAAAAAGATGAAAGGTGGCAACAATGCAGATGCCAATGCGAATAAGCCTACTCGGCCCTTGGAATCAGTTGTGCTCAATCAAAATTTGCAAGAACCTGTGAAGGATTTGGACGAGGATAGTGATGCAGATAGTGAGGGGCAGATGGTAGATGGGATTCTTACTTCAGATCCAAAAGTTGAATCATCTTATGAACTTCCTTCCCAAGCTGAGATAATTCGTCAAGCCTTTGCGGCTGATGATGTGGAGGATGACTTTGAGAAGGAAAAACAGGAAGTCCTGAACAAGGAAAATCCTGAACCCGAAAAGCCTGTTTTACTCCCTGGATGGGGTCAGTGGACTCATGTACAGAAAAAGAAAGGGTTACCTTCTTGGATGTTGCAAGAACATGAAAGTGCCAAGAGGATGAGAGAAGAAACCCTTAAAAAGAGGAAGGATGCACATCTTAAACGTGTTATTATCTCAGAAAAGTTGGATAAAAAGGCTGAGAAACTTTATACAAAATCATTGCCTTACCCTTTCACGTCCAAAGAAGTTTATGAACAGAGCATCCGCATGCCCCTTGGTCCTGAATTCAACCCCGCAACTGCGGTTGGAGCTCTTAATCGGCCTGAAGTAATGAAGAAACCTGGTGTGATTATAAAGCCCATCGAGTTTGAGGAGGTGAATCCTTATGAAAGAATAGAGGAGCAAACACAAAGTGGAAAGAAACATAAAAAGAGGAATAAGAGTAAAAGCAATAGCAGCAAAAATGGGACAAAGGTGAAAACTAAGCTCAAGAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000154 GO:0000447 GO:0000460 GO:0000462 GO:0000466 GO:0000469 GO:0000472 GO:0000478 GO:0000479 GO:0000480 GO:0000966 GO:0000967 GO:0001510 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0030490 GO:0030684 GO:0031167 GO:0031974 GO:0031981 GO:0032040 GO:0032259 GO:0032991 GO:0034470 GO:0034471 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

Utp14

Protein Analysis

901

Amino Acids

102.74

Weight (kDa)

5.83

Isoelectric Point (pI)

46.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007235)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02400 AT5G08600 AT5G08600 AT5G08600 AT5G36980
fragaria_vesca	FvH4_2g25830 FvH4_2g25830 FvH4_2g25830 FvH4_2g25830 FvH4_2g25830
malus_domestica	MD03G1289000.v1.1 MD11G1308900.v1.1
prunus_persica	Prupe.8G262300_v2.0.a1 Prupe.8G262300_v2.0.a1
pyrus_communis	pycom03g22910
rosa_chinensis	RchiOBHm_Chr6g0294141
rosa_laevigata	RLG00000011895
rosa_multiflora	Rmu_sc0005037.1_g000007
rosa_roxburghii	Rroxscaffold_7G00173610
rosa_rugosa	Rorug06G0241800
rosa_samantha	Rh6AG354200 Rh6BG361100 Rh6CG368400 Rh6DG355200
rosa_wichuraiana	Rw6G030870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2558
AarI	CACCTGC	1 cut(s)	1263
Acc16I	TGCGCA	1 cut(s)	968
Acc36I	ACCTGC	1 cut(s)	1263
AccB1I	GGYRCC	2 cut(s)	77, 742
AccB7I	CCANNNNNTGG	1 cut(s)	871
AciI	CCGC	9 cut(s)	5, 253, 638, 943, 1785, 2150, 2470, 2499, 2507
AclWI	GGATC	4 cut(s)	186, 1082, 1095, 2081
AcoI	YGGCCR	2 cut(s)	196, 957
AcsI	RAATTY	7 cut(s)	299, 809, 827, 1282, 1814, 2002, 2489
AcuI	CTGAAG	5 cut(s)	948, 1530, 1893, 2067, 2550
AcyI	GRCGYC	1 cut(s)	743
AdeI	CACNNNGTG	1 cut(s)	2618
AfaI	GTAC	4 cut(s)	215, 260, 1476, 2265
AfiI	CCNNNNNNNGG	7 cut(s)	563, 871, 1448, 1604, 2203, 2245, 2246
AflIII	ACRYGT	1 cut(s)	2368
AjiI	CACGTC	1 cut(s)	2442
AjnI	CCWGG	5 cut(s)	341, 864, 1870, 2239, 2545
AloI	GAACNNNNNNTCC	2 cut(s)	2451, 2483
Alw21I	GWGCWC	3 cut(s)	135, 1995, 2518
Alw26I	GTCTC	2 cut(s)	2, 537
AlwI	GGATC	4 cut(s)	186, 1082, 1095, 2081
AlwNI	CAGNNNCTG	3 cut(s)	1097, 1255, 1508
Ama87I	CYCGRG	2 cut(s)	278, 482
AoxI	GGCC	6 cut(s)	100, 196, 957, 1593, 1973, 2525
ApeKI	GCWGC	8 cut(s)	226, 677, 969, 1097, 1249, 1502, 1505, 2661
ApoI	RAATTY	7 cut(s)	299, 809, 827, 1282, 1814, 2002, 2489
AseI	ATTAAT	1 cut(s)	1791
AspLEI	GCGC	3 cut(s)	745, 969, 1188
AspS9I	GGNCC	9 cut(s)	101, 527, 553, 940, 1179, 1594, 1874, 1974, 2483
AsuC2I	CCSGG	1 cut(s)	200
AsuHPI	GGTGA	4 cut(s)	533, 872, 2593, 2692
AvaI	CYCGRG	2 cut(s)	278, 482
AvaII	GGWCC	6 cut(s)	527, 553, 940, 1179, 1874, 2483
AxyI	CCTNAGG	1 cut(s)	294
BalI	TGGCCA	1 cut(s)	959
BamHI	GGATCC	1 cut(s)	1087
BanI	GGYRCC	2 cut(s)	77, 742
BanII	GRGCYC	3 cut(s)	135, 1731, 2518
BbsI	GAAGAC	4 cut(s)	1412, 1609, 1761, 1886
Bbv12I	GWGCWC	3 cut(s)	135, 1995, 2518
BbvI	GCAGC	8 cut(s)	213, 689, 981, 1084, 1261, 1492, 1514, 2673
BccI	CCATC	8 cut(s)	353, 386, 884, 1289, 2056, 2063, 2238, 2573
BciT130I	CCWGG	5 cut(s)	343, 866, 1872, 2241, 2547
BciVI	GTATCC	1 cut(s)	489
BcnI	CCSGG	1 cut(s)	200
BcoDI	GTCTC	2 cut(s)	2, 537
BfaI	CTAG	2 cut(s)	24, 1371
BfoI	RGCGCY	1 cut(s)	746
BfuAI	ACCTGC	1 cut(s)	1263
BfuI	GTATCC	1 cut(s)	489
BglI	GCCNNNNNGGC	2 cut(s)	1972, 2150
Bme1390I	CCNGG	6 cut(s)	200, 343, 866, 1872, 2241, 2547
Bme18I	GGWCC	6 cut(s)	527, 553, 940, 1179, 1874, 2483
BmeT110I	CYCGRG	2 cut(s)	278, 482
BmgBI	CACGTC	1 cut(s)	2442
BmgT120I	GGNCC	9 cut(s)	101, 527, 553, 940, 1179, 1594, 1874, 1974, 2483
BmiI	GGNNCC	9 cut(s)	79, 169, 529, 555, 717, 744, 1089, 1596, 1641
BmrFI	CCNGG	6 cut(s)	200, 343, 866, 1872, 2241, 2547
BmsI	GCATC	9 cut(s)	279, 1073, 1197, 1385, 1634, 1939, 2032, 2344, 2475
BoxI	GACNNNNGTC	1 cut(s)	1872
BpiI	GAAGAC	4 cut(s)	1412, 1609, 1761, 1886
BpmI	CTGGAG	2 cut(s)	372, 1626
BpuEI	CTTGAG	1 cut(s)	2678
BpuMI	CCSGG	1 cut(s)	200
BsaAI	YACGTR	1 cut(s)	1478
BsaBI	GATNNNNATC	1 cut(s)	2358
BsaHI	GRCGYC	1 cut(s)	743
BsaI	GGTCTC	1 cut(s)	537
BsaJI	CCNNGG	5 cut(s)	562, 1870, 1977, 2239, 2479
BsaXI	ACNNNNNCTCC	4 cut(s)	224, 254, 619, 649
Bsc4I	CCNNNNNNNGG	7 cut(s)	563, 871, 1448, 1604, 2203, 2245, 2246
Bse118I	RCCGGY	1 cut(s)	255
Bse21I	CCTNAGG	1 cut(s)	294
Bse3DI	GCAATG	2 cut(s)	1119, 2423
Bse8I	GATNNNNATC	1 cut(s)	2358
BseBI	CCWGG	5 cut(s)	343, 866, 1872, 2241, 2547
BseDI	CCNNGG	5 cut(s)	562, 1870, 1977, 2239, 2479
BseJI	GATNNNNATC	1 cut(s)	2358
BseLI	CCNNNNNNNGG	7 cut(s)	563, 871, 1448, 1604, 2203, 2245, 2246
BseMI	GCAATG	2 cut(s)	1119, 2423
BseMII	CTCAG	6 cut(s)	285, 480, 1145, 2118, 2394, 2394
BseRI	GAGGAG	5 cut(s)	236, 248, 251, 2591, 2618
BseXI	GCAGC	8 cut(s)	213, 689, 981, 1084, 1261, 1492, 1514, 2673
BseYI	CCCAGC	1 cut(s)	56
BshFI	GGCC	6 cut(s)	102, 198, 959, 1595, 1975, 2527
BshNI	GGYRCC	2 cut(s)	77, 742
BsiHKAI	GWGCWC	3 cut(s)	135, 1995, 2518
BsiHKCI	CYCGRG	2 cut(s)	278, 482
BsiSI	CCGG	3 cut(s)	199, 230, 256
BslFI	GGGAC	2 cut(s)	215, 2686
BslI	CCNNNNNNNGG	7 cut(s)	563, 871, 1448, 1604, 2203, 2245, 2246
BsmAI	GTCTC	2 cut(s)	2, 537
BsmBI	CGTCTC	1 cut(s)	2
BsmFI	GGGAC	2 cut(s)	215, 2686
BsnI	GGCC	6 cut(s)	102, 198, 959, 1595, 1975, 2527
Bso31I	GGTCTC	1 cut(s)	537
BsoBI	CYCGRG	2 cut(s)	278, 482
Bsp1286I	GDGCHC	4 cut(s)	135, 1731, 1995, 2518
Bsp1407I	TGTACA	1 cut(s)	2263
Bsp143I	GATC	7 cut(s)	178, 652, 1014, 1087, 1363, 1682, 2086
Bsp19I	CCATGG	1 cut(s)	562
BspACI	CCGC	9 cut(s)	5, 253, 638, 943, 1785, 2150, 2470, 2499, 2507
BspANI	GGCC	6 cut(s)	102, 198, 959, 1595, 1975, 2527
BspCNI	CTCAG	6 cut(s)	286, 481, 1146, 2119, 2393, 2395
BspHI	TCATGA	1 cut(s)	985
BspLI	GGNNCC	9 cut(s)	79, 169, 529, 555, 717, 744, 1089, 1596, 1641
BspMI	ACCTGC	1 cut(s)	1263
BspPI	GGATC	4 cut(s)	186, 1082, 1095, 2081
BspQI	GCTCTTC	1 cut(s)	1533
BspT107I	GGYRCC	2 cut(s)	77, 742
BspTNI	GGTCTC	1 cut(s)	537
BsrDI	GCAATG	2 cut(s)	1119, 2423
BsrFI	RCCGGY	1 cut(s)	255
BsrGI	TGTACA	1 cut(s)	2263
BssAI	RCCGGY	1 cut(s)	255
BssECI	CCNNGG	5 cut(s)	562, 1870, 1977, 2239, 2479
BssMI	GATC	7 cut(s)	178, 652, 1014, 1087, 1363, 1682, 2086
BssNI	GRCGYC	1 cut(s)	743
BssT1I	CCWWGG	3 cut(s)	562, 1977, 2479
Bst2UI	CCWGG	5 cut(s)	343, 866, 1872, 2241, 2547
Bst4CI	ACNGT	2 cut(s)	790, 1322
Bst6I	CTCTTC	5 cut(s)	180, 213, 693, 983, 1533
BstACI	GRCGYC	1 cut(s)	743
BstAPI	GCANNNNNTGC	3 cut(s)	1255, 1264, 1583
BstAUI	TGTACA	1 cut(s)	2263
BstBAI	YACGTR	1 cut(s)	1478
BstC8I	GCNNGC	2 cut(s)	1260, 2474
BstDEI	CTNAG	8 cut(s)	294, 489, 587, 1154, 2127, 2380, 2403, 2688
BstDSI	CCRYGG	1 cut(s)	562
BstEII	GGTNACC	1 cut(s)	2280
BstENI	CCTNNNNNAGG	2 cut(s)	1446, 2201
BstH2I	RGCGCY	1 cut(s)	746
BstHHI	GCGC	3 cut(s)	745, 969, 1188
BstKTI	GATC	7 cut(s)	181, 655, 1017, 1090, 1366, 1685, 2089
BstMAI	GTCTC	2 cut(s)	2, 537
BstMBI	GATC	7 cut(s)	178, 652, 1014, 1087, 1363, 1682, 2086
BstNI	CCWGG	5 cut(s)	343, 866, 1872, 2241, 2547
BstNSI	RCATGY	2 cut(s)	1262, 2476
BstPAI	GACNNNNGTC	1 cut(s)	1872
BstPI	GGTNACC	1 cut(s)	2280
BstSCI	CCNGG	6 cut(s)	198, 341, 864, 1870, 2239, 2545
BstV1I	GCAGC	8 cut(s)	213, 689, 981, 1084, 1261, 1492, 1514, 2673
BstV2I	GAAGAC	4 cut(s)	1412, 1609, 1761, 1886
BstX2I	RGATCY	2 cut(s)	1087, 2086
BstXI	CCANNNNNNTGG	1 cut(s)	890
BstYI	RGATCY	2 cut(s)	1087, 2086
Bsu36I	CCTNAGG	1 cut(s)	294
BsuI	GTATCC	1 cut(s)	489
BsuRI	GGCC	6 cut(s)	102, 198, 959, 1595, 1975, 2527
BtgI	CCRYGG	1 cut(s)	562
BtrI	CACGTC	1 cut(s)	2442
BtsI	GCAGTG	1 cut(s)	1318
BtsIMutI	CAGTG	2 cut(s)	1318, 2258
BveI	ACCTGC	1 cut(s)	1263
Cac8I	GCNNGC	2 cut(s)	1260, 2474
CaiI	CAGNNNCTG	3 cut(s)	1097, 1255, 1508
CciI	TCATGA	1 cut(s)	985
CfoI	GCGC	3 cut(s)	745, 969, 1188
Cfr10I	RCCGGY	1 cut(s)	255
Cfr13I	GGNCC	9 cut(s)	101, 527, 553, 940, 1179, 1594, 1874, 1974, 2483
CsiI	ACCWGGT	2 cut(s)	864, 2545
Csp6I	GTAC	4 cut(s)	214, 259, 1475, 2264
CspCI	CAANNNNNGTGG	2 cut(s)	1180, 1215
CviAII	CATG	9 cut(s)	563, 986, 1259, 1545, 1889, 1917, 2261, 2306, 2473
CviQI	GTAC	4 cut(s)	214, 259, 1475, 2264
DdeI	CTNAG	8 cut(s)	294, 489, 587, 1154, 2127, 2380, 2403, 2688
DinI	GGCGCC	1 cut(s)	744
DpnI	GATC	7 cut(s)	180, 654, 1016, 1089, 1365, 1684, 2088
DpnII	GATC	7 cut(s)	178, 652, 1014, 1087, 1363, 1682, 2086
DraI	TTTAAA	1 cut(s)	1819
DraIII	CACNNNGTG	1 cut(s)	2618
EaeI	YGGCCR	2 cut(s)	196, 957
Eam1104I	CTCTTC	5 cut(s)	180, 213, 693, 983, 1533
EarI	CTCTTC	5 cut(s)	180, 213, 693, 983, 1533
EciI	GGCGGA	1 cut(s)	20
Ecl136II	GAGCTC	2 cut(s)	133, 2516
Eco130I	CCWWGG	3 cut(s)	562, 1977, 2479
Eco24I	GRGCYC	3 cut(s)	135, 1731, 2518
Eco31I	GGTCTC	1 cut(s)	537
Eco32I	GATATC	1 cut(s)	1747
Eco47I	GGWCC	6 cut(s)	527, 553, 940, 1179, 1874, 2483
Eco53kI	GAGCTC	2 cut(s)	133, 2516
Eco57I	CTGAAG	5 cut(s)	948, 1530, 1893, 2067, 2550
Eco81I	CCTNAGG	1 cut(s)	294
Eco88I	CYCGRG	2 cut(s)	278, 482
Eco91I	GGTNACC	1 cut(s)	2280
EcoICRI	GAGCTC	2 cut(s)	133, 2516
EcoNI	CCTNNNNNAGG	2 cut(s)	1446, 2201
EcoO109I	RGGNCCY	2 cut(s)	101, 527
EcoO65I	GGTNACC	1 cut(s)	2280
EcoRI	GAATTC	2 cut(s)	1282, 2489
EcoRII	CCWGG	5 cut(s)	341, 864, 1870, 2239, 2545
EcoRV	GATATC	1 cut(s)	1747
EcoT14I	CCWWGG	3 cut(s)	562, 1977, 2479
EcoT22I	ATGCAT	1 cut(s)	1627
EcoT38I	GRGCYC	3 cut(s)	135, 1731, 2518
EgeI	GGCGCC	1 cut(s)	744
EheI	GGCGCC	1 cut(s)	744
ErhI	CCWWGG	3 cut(s)	562, 1977, 2479
Esp3I	CGTCTC	1 cut(s)	2
FaeI	CATG	9 cut(s)	566, 989, 1262, 1548, 1892, 1920, 2264, 2309, 2476
FalI	AAGNNNNNCTT	6 cut(s)	412, 444, 1506, 1538, 2322, 2354
FaqI	GGGAC	2 cut(s)	215, 2686
FatI	CATG	9 cut(s)	562, 985, 1258, 1544, 1888, 1916, 2260, 2305, 2472
FauI	CCCGC	1 cut(s)	2506
FriOI	GRGCYC	3 cut(s)	135, 1731, 2518
FspBI	CTAG	2 cut(s)	24, 1371
FspI	TGCGCA	1 cut(s)	968
GlaI	GCGC	3 cut(s)	744, 968, 1187
GsaI	CCCAGC	1 cut(s)	60
GsuI	CTGGAG	2 cut(s)	372, 1626
HaeII	RGCGCY	1 cut(s)	746
HaeIII	GGCC	6 cut(s)	102, 198, 959, 1595, 1975, 2527
HapII	CCGG	3 cut(s)	199, 230, 256
HhaI	GCGC	3 cut(s)	745, 969, 1188
Hin1I	GRCGYC	1 cut(s)	743
Hin1II	CATG	9 cut(s)	566, 989, 1262, 1548, 1892, 1920, 2264, 2309, 2476
Hin6I	GCGC	3 cut(s)	743, 967, 1186
HinP1I	GCGC	3 cut(s)	743, 967, 1186
HindIII	AAGCTT	1 cut(s)	426
HpaII	CCGG	3 cut(s)	199, 230, 256
HphI	GGTGA	4 cut(s)	533, 872, 2593, 2692
Hpy166II	GTNNAC	2 cut(s)	1179, 2256
Hpy8I	GTNNAC	2 cut(s)	1179, 2256
Hpy99I	CGWCG	2 cut(s)	176, 272
HpyCH4III	ACNGT	2 cut(s)	790, 1322
HpyCH4IV	ACGT	3 cut(s)	1477, 2368, 2441
HpyF3I	CTNAG	8 cut(s)	294, 489, 587, 1154, 2127, 2380, 2403, 2688
HpySE526I	ACGT	3 cut(s)	1477, 2368, 2441
Hsp92I	GRCGYC	1 cut(s)	743
Hsp92II	CATG	9 cut(s)	566, 989, 1262, 1548, 1892, 1920, 2264, 2309, 2476
HspAI	GCGC	3 cut(s)	743, 967, 1186
KasI	GGCGCC	1 cut(s)	742
Kzo9I	GATC	7 cut(s)	178, 652, 1014, 1087, 1363, 1682, 2086
LguI	GCTCTTC	1 cut(s)	1533
LmnI	GCTCC	9 cut(s)	130, 223, 640, 715, 794, 1175, 1645, 2513, 2605
Lsp1109I	GCAGC	8 cut(s)	213, 689, 981, 1084, 1261, 1492, 1514, 2673
LweI	GCATC	9 cut(s)	279, 1073, 1197, 1385, 1634, 1939, 2032, 2344, 2475
MabI	ACCWGGT	2 cut(s)	864, 2545
MaeI	CTAG	2 cut(s)	24, 1371
MaeII	ACGT	3 cut(s)	1477, 2368, 2441
MaeIII	GTNAC	1 cut(s)	2280
MalI	GATC	7 cut(s)	180, 654, 1016, 1089, 1365, 1684, 2088
MboI	GATC	7 cut(s)	178, 652, 1014, 1087, 1363, 1682, 2086
MflI	RGATCY	2 cut(s)	1087, 2086
MhlI	GDGCHC	4 cut(s)	135, 1731, 1995, 2518
MlsI	TGGCCA	1 cut(s)	959
MluNI	TGGCCA	1 cut(s)	959
Mly113I	GGCGCC	1 cut(s)	743
MlyI	GAGTC	5 cut(s)	248, 494, 1144, 1550, 2251
MmeI	TCCRAC	6 cut(s)	195, 495, 1401, 1539, 2370, 2491
Mox20I	TGGCCA	1 cut(s)	959
Mph1103I	ATGCAT	1 cut(s)	1627
MscI	TGGCCA	1 cut(s)	959
MseI	TTAA	9 cut(s)	143, 726, 911, 1413, 1791, 1818, 2340, 2364, 2520
MslI	CAYNNNNRTG	3 cut(s)	1257, 2310, 2471
Msp20I	TGGCCA	1 cut(s)	959
MspA1I	CMGCKG	3 cut(s)	926, 1355, 1505
MspI	CCGG	3 cut(s)	199, 230, 256
MspR9I	CCNGG	6 cut(s)	200, 343, 866, 1872, 2241, 2547
MvaI	CCWGG	5 cut(s)	343, 866, 1872, 2241, 2547
NarI	GGCGCC	1 cut(s)	743
NciI	CCSGG	1 cut(s)	200
NcoI	CCATGG	1 cut(s)	562
NdeII	GATC	7 cut(s)	178, 652, 1014, 1087, 1363, 1682, 2086
NlaIII	CATG	9 cut(s)	566, 989, 1262, 1548, 1892, 1920, 2264, 2309, 2476
NlaIV	GGNNCC	9 cut(s)	79, 169, 529, 555, 717, 744, 1089, 1596, 1641
NmeAIII	GCCGAG	1 cut(s)	1951
NsbI	TGCGCA	1 cut(s)	968
NsiI	ATGCAT	1 cut(s)	1627
NspI	RCATGY	2 cut(s)	1262, 2476
PaeI	GCATGC	2 cut(s)	1262, 2476
PaeR7I	CTCGAG	1 cut(s)	278
PagI	TCATGA	1 cut(s)	985
PaqCI	CACCTGC	1 cut(s)	1263
PciSI	GCTCTTC	1 cut(s)	1533
PcsI	WCGNNNNNNNCGW	2 cut(s)	267, 276
PfeI	GAWTC	7 cut(s)	1565, 1646, 1832, 1982, 2074, 2099, 2584
PflFI	GACNNNGTC	1 cut(s)	266
PflMI	CCANNNNNTGG	1 cut(s)	871
PleI	GAGTC	5 cut(s)	247, 493, 1144, 1549, 2251
PluTI	GGCGCC	1 cut(s)	746
PpsI	GAGTC	5 cut(s)	247, 493, 1144, 1549, 2251
Ppu21I	YACGTR	1 cut(s)	1478
PpuMI	RGGWCCY	1 cut(s)	527
PshAI	GACNNNNGTC	1 cut(s)	1872
PshBI	ATTAAT	1 cut(s)	1791
PsiI	TTATAA	1 cut(s)	2558
Psp124BI	GAGCTC	2 cut(s)	135, 2518
Psp5II	RGGWCCY	1 cut(s)	527
Psp6I	CCWGG	5 cut(s)	341, 864, 1870, 2239, 2545
PspEI	GGTNACC	1 cut(s)	2280
PspFI	CCCAGC	1 cut(s)	56
PspGI	CCWGG	5 cut(s)	341, 864, 1870, 2239, 2545
PspN4I	GGNNCC	9 cut(s)	79, 169, 529, 555, 717, 744, 1089, 1596, 1641
PspPI	GGNCC	9 cut(s)	101, 527, 553, 940, 1179, 1594, 1874, 1974, 2483
PspPPI	RGGWCCY	1 cut(s)	527
PspXI	VCTCGAGB	1 cut(s)	278
PsrI	GAACNNNNNNTAC	2 cut(s)	242, 274
PstNI	CAGNNNCTG	3 cut(s)	1097, 1255, 1508
PsuI	RGATCY	2 cut(s)	1087, 2086
PsyI	GACNNNGTC	1 cut(s)	266
PvuII	CAGCTG	3 cut(s)	926, 1355, 1505
RsaI	GTAC	4 cut(s)	215, 260, 1476, 2265
RsaNI	GTAC	4 cut(s)	214, 259, 1475, 2264
RseI	CAYNNNNRTG	3 cut(s)	1257, 2310, 2471
SacI	GAGCTC	2 cut(s)	135, 2518
SapI	GCTCTTC	1 cut(s)	1533
SaqAI	TTAA	9 cut(s)	143, 726, 911, 1413, 1791, 1818, 2340, 2364, 2520
Sau3AI	GATC	7 cut(s)	178, 652, 1014, 1087, 1363, 1682, 2086
Sau96I	GGNCC	9 cut(s)	101, 527, 553, 940, 1179, 1594, 1874, 1974, 2483
SchI	GAGTC	5 cut(s)	248, 494, 1144, 1550, 2251
ScrFI	CCNGG	6 cut(s)	200, 343, 866, 1872, 2241, 2547
SduI	GDGCHC	4 cut(s)	135, 1731, 1995, 2518
SexAI	ACCWGGT	2 cut(s)	864, 2545
SfaNI	GCATC	9 cut(s)	279, 1073, 1197, 1385, 1634, 1939, 2032, 2344, 2475
SfoI	GGCGCC	1 cut(s)	744
Sfr274I	CTCGAG	1 cut(s)	278
SinI	GGWCC	6 cut(s)	527, 553, 940, 1179, 1874, 2483
SlaI	CTCGAG	1 cut(s)	278
SmiMI	CAYNNNNRTG	3 cut(s)	1257, 2310, 2471
SmlI	CTYRAG	2 cut(s)	278, 2693
SmoI	CTYRAG	2 cut(s)	278, 2693
SphI	GCATGC	2 cut(s)	1262, 2476
SsiI	CCGC	9 cut(s)	5, 253, 638, 943, 1785, 2150, 2470, 2499, 2507
SspDI	GGCGCC	1 cut(s)	742
SspMI	CTAG	2 cut(s)	24, 1371
SstI	GAGCTC	2 cut(s)	135, 2518
StyD4I	CCNGG	6 cut(s)	198, 341, 864, 1870, 2239, 2545
StyI	CCWWGG	3 cut(s)	562, 1977, 2479
TaaI	ACNGT	2 cut(s)	790, 1322
TaiI	ACGT	3 cut(s)	1480, 2371, 2444
TaqI	TCGA	7 cut(s)	135, 270, 279, 952, 1725, 1851, 2568
TatI	WGTACW	1 cut(s)	2263
TauI	GCSGC	2 cut(s)	1788, 2153
TfiI	GAWTC	7 cut(s)	1565, 1646, 1832, 1982, 2074, 2099, 2584
Tru1I	TTAA	9 cut(s)	143, 726, 911, 1413, 1791, 1818, 2340, 2364, 2520
Tru9I	TTAA	9 cut(s)	143, 726, 911, 1413, 1791, 1818, 2340, 2364, 2520
TscAI	CASTG	2 cut(s)	1318, 2258
TseI	GCWGC	8 cut(s)	226, 677, 969, 1097, 1249, 1502, 1505, 2661
TspGWI	ACGGA	1 cut(s)	971
TspRI	CASTG	2 cut(s)	1318, 2258
Tth111I	GACNNNGTC	1 cut(s)	266
Van91I	CCANNNNNTGG	1 cut(s)	871
VpaK11BI	GGWCC	6 cut(s)	527, 553, 940, 1179, 1874, 2483
VspI	ATTAAT	1 cut(s)	1791
XagI	CCTNNNNNAGG	2 cut(s)	1446, 2201
XapI	RAATTY	7 cut(s)	299, 809, 827, 1282, 1814, 2002, 2489
XbaI	TCTAGA	1 cut(s)	23
XceI	RCATGY	2 cut(s)	1262, 2476
XcmI	CCANNNNNNNNNTGG	1 cut(s)	569
XhoI	CTCGAG	1 cut(s)	278
XspI	CTAG	2 cut(s)	24, 1371
Zsp2I	ATGCAT	1 cut(s)	1627

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.