Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0007235

Physical Location & Seq

Genomic Coordinates Forward (+)

13605924 .. 13610948

Gene Structure 5025 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000011895

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2730 bp

ATGGCAGAGACCAAGCGAAAAACCAGAGACGACGGAAGTAGACAACGGAGCAGCAGCAAGAAGCCGAAAACCAGCAAGAAAGGCAAGAGCGCCGATAAGGCAGAAAGAAAAGGCCCTCGTTTGCCCAACGCTCTGCGGAAGGAGCTCGACCGCTTAAACCCTAGAACTGCCGACTCCGACGAAGAGATTGGCTCCGATGAAGAGGCTTTGGGCCAGGACCTGTATGAGTATGAAGAGGGACTGCCGGAGGAGGAGTCCAAGAAGAACCGCCGGTTCGACCCCGTCGATAACCTCGATTATGAGCTACCTGAGGACTTCGAGGATGAAAATGTGTCCTCTGATGATGACAATGAGGCCAGGAACGGTGGAGAGAGTGAGGCGGAGGACGAGGTTAAAGAGGAAAATGATGGAAGGAGAATCGGAGAAATGCCGACCCAGACTGTTGAAGGGAGGAGGAAGAAGATAAACAATGTTGTGGTGTCGGAGGCATATCCTGAGTCCGAGTATGACCCTACTCGTGATATGTTGGAGGGTGAAGGAGCACTTAGCATTGGAGACCTTCTGGACCCTCTCCAAGGGAAACATGGTTATAGCAAACTTAAGAAGAGAGTACGTATTCTGGATAAGAAATCTACACCCATTCAAGCTCCACTTCCCAAGCCTGTGCAGCAGAGATTGGAGAGGAATGCAGCATATGACAAATCAAAGGAAGAGTTAAGAAAGTGGGAGCCAATCATAAAGAGGAATAGGGAGGCGCCTACCATATACTTTGATGATGATAGGGATCTAGGGCCTTCATCCGTGGGAGCAATAGCATCTGAATTTGAACCTCGAACTGAGTTCGAGAAGAAAATGGCTTCATTACTTTATGATGACGAGGTTATGGATGCTCACAGAAAAGATGGTTCAAGGCTCCTTGAATTAAATAAGGTATCTGCTGAAGATGAAAAGGACCGCCAGAATCGAATCGCCAAAATGCGCAGCCTTCTGTTCCGGCATGAGTTGAAGTCAAAACACATAAAAAACATCAAATCCAAAACCTATCATCGTTTGTTGAAGAAAGACAAATTGAAGGCGAACTCTTTACAAATGGATCCAGAAGCTTCTAAAGAACTTGCAATGAAGCAAGAGTATGAACGAGCAAAGGAACGGATGACTCTGAGGCACAAAGGCAGCTCTAAGTGGGCAAAGCGCATAAAAGAGCGTGGTCTAGATGTCCAAGATGATGGTACTCGAGCTGCTATAGCCGAACAGCAGCACCTGCATGCTCAGCTGACAAGAAAAATGAATTCTATGAAAGATAGTGACACCAGCAGTAATGACACTAGTGATGATGATGATGATGATGTGGATGTTAACTCAGATGACGAGGGTAGGGCATCAAAGTTGTTAGAAAAAGCAAAGGAGAAGACACTTAAACTGTTAAATGAAGATAATGAAGTTCCAAACTCGGGGTTGCTTAGTTTACCTTTCATGGAACGTGCATCTAAAAAAAAGAATGAGGCAGCTACTGAAGAAGCTAAACTTGCTCTTCAAGAGTATGAATCATGGGCAAATCAATTGGGGGATTCAGGTGGGGGCAAAAATTTGAAAGTAGGCCGTCCGAGTGGGAGAATGGTCTTCAATGGAAAGGAGGCTCCAGAATCAAGTAAGAAGACTAAATCAGATAACAAGAATAGATCAGATCATTATTACGGTGATAGTGATAGTGATAGTGAAGACGACTTGGAACCCATCAGTATTTCCCCTGTTGGGAAATACAGAAGTAATGAATTAATGAAGGATGCCAACATTTCTCCTGTTTTACTTCATGAAGATTCTGAAAATCATAAGGATTCTTTTTTCAAGCAAAACACTGATGGTAGCGTGCAAGACCCAGGTTCCCAGGCAACACATGAAGTTTCTATCTTTGCTTCAGGCACATGGAGAAAGATGAAGAATGGAAATGACGCAAATGCCAATGCCAAGAAGTCTCCTGCACCCCTGCAATCAGTTGAGCTTGATCAGAATGTGCAAGAATCTGTAAAGGATTTGGATGAGGACAGTGATGCAGATAGTGAGGGACAAATGGTAGATGGGGTTCTTTCAGCGGTACCAGAACCATCGTATGAACTTCCTTCCCAAGAAGAGCTGATTCGTCAAGCCTTTGCAGCAGATAATGTGGAGGATGAGTTCAAGAAAACAAAAGAGGATATTTTGAACGAGGAAAATCCCGAACCTGAAAAGCCTGTGTTACTCCCTGGATGGGGTCAGTGGACTAACGTACAGAAAAAGAAAGGAATACCTTCTTATATGCGGATAGAACATGATAGTGCCAAGAAGAAGAGGGAAGAAGCCCTTAAACAAAGAAAGGATGCAAATCTCAAACATGTTATTATCTCTGAGAAGCCACCAAATAAAAAGTCTCAGAACCTTTTCACACAATCATTGCCCTACCCTTTCACGTCCAAAGAAGTTTTTGAACAGAGCATCCGCATGCCCCTTGGTCCTGAATTCAACCCTGCAAGTATGGTTGGAGCTCTTAATCGACCTGAAAAGCTCAGGGCGAGGTTACTTTCAATATTGGTAGCACTAATGGCAGCAAGTGCTGCAATCCGAGATTCATCTCTTCAATATCAGCAAACTGGGTTTCTTCAAGCACGGGCGGGTATCATCGTCATGATCATTCACAGCCACCACTCTCTCTGTCGGTCCTTCGAAGATCAACAACAGGAACACAAGCCGCCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000154 GO:0000447 GO:0000460 GO:0000462 GO:0000466 GO:0000469 GO:0000472 GO:0000478 GO:0000479 GO:0000480 GO:0000966 GO:0000967 GO:0001510 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0030490 GO:0030684 GO:0031167 GO:0031974 GO:0031981 GO:0032040 GO:0032259 GO:0032991 GO:0034470 GO:0034471 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

Utp14

Protein Analysis

910

Amino Acids

102.91

Weight (kDa)

5.54

Isoelectric Point (pI)

51.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Utp14	PF04615	151 - 845	1.3e-160	Utp14 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0007235)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02400 AT5G08600 AT5G08600 AT5G08600 AT5G36980
fragaria_vesca	FvH4_2g25830 FvH4_2g25830 FvH4_2g25830 FvH4_2g25830 FvH4_2g25830
malus_domestica	MD03G1289000.v1.1 MD11G1308900.v1.1
prunus_persica	Prupe.8G262300_v2.0.a1 Prupe.8G262300_v2.0.a1
pyrus_communis	pycom03g22910
rosa_chinensis	RchiOBHm_Chr6g0294141
rosa_laevigata	RLG00000011895
rosa_multiflora	Rmu_sc0005037.1_g000007
rosa_roxburghii	Rroxscaffold_7G00173610
rosa_rugosa	Rorug06G0241800
rosa_samantha	Rh6AG354200 Rh6BG361100 Rh6CG368400 Rh6DG355200
rosa_wichuraiana	Rw6G030870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1269
Acc16I	TGCGCA	1 cut(s)	980
Acc36I	ACCTGC	1 cut(s)	1269
Acc65I	GGTACC	1 cut(s)	2092
AccB1I	GGYRCC	2 cut(s)	754, 2092
AccI	GTMKAC	1 cut(s)	40
AclWI	GGATC	3 cut(s)	792, 1088, 1101
AcsI	RAATTY	4 cut(s)	821, 1288, 1585, 2492
AcuI	CTGAAG	3 cut(s)	960, 1533, 1899
AcyI	GRCGYC	1 cut(s)	755
AfaI	GTAC	4 cut(s)	612, 1231, 2094, 2265
AfiI	CCNNNNNNNGG	5 cut(s)	575, 1451, 1752, 2245, 2246
AflII	CTTAAG	1 cut(s)	599
AflIII	ACRYGT	1 cut(s)	2368
AhlI	ACTAGT	1 cut(s)	1325
AjiI	CACGTC	1 cut(s)	2445
AjnI	CCWGG	5 cut(s)	213, 356, 1876, 1884, 2239
AloI	GAACNNNNNNTCC	4 cut(s)	2156, 2188, 2454, 2486
Alw21I	GWGCWC	3 cut(s)	147, 544, 2521
Alw26I	GTCTC	5 cut(s)	2, 21, 549, 1977, 2409
AlwI	GGATC	3 cut(s)	792, 1088, 1101
AlwNI	CAGNNNCTG	3 cut(s)	220, 1261, 1511
Ama87I	CYCGRG	2 cut(s)	1233, 1450
AoxI	GGCC	5 cut(s)	112, 211, 354, 791, 1597
ApoI	RAATTY	4 cut(s)	821, 1288, 1585, 2492
ArsI	GACNNNNNNTTYG	2 cut(s)	2387, 2419
AseI	ATTAAT	1 cut(s)	1775
Asp700I	GAANNNNTTC	2 cut(s)	2284, 2414
Asp718I	GGTACC	1 cut(s)	2092
AspLEI	GCGC	4 cut(s)	92, 757, 981, 1194
AspS9I	GGNCC	8 cut(s)	113, 211, 217, 565, 791, 952, 2486, 2691
AsuHPI	GGTGA	2 cut(s)	545, 1709
AsuII	TTCGAA	1 cut(s)	2697
AvaI	CYCGRG	2 cut(s)	1233, 1450
AvaII	GGWCC	5 cut(s)	217, 565, 952, 2486, 2691
AxyI	CCTNAGG	1 cut(s)	309
BamHI	GGATCC	1 cut(s)	1093
BanI	GGYRCC	2 cut(s)	754, 2092
BanII	GRGCYC	2 cut(s)	147, 2521
BauI	CACGAG	1 cut(s)	516
BbsI	GAAGAC	4 cut(s)	1415, 1612, 1661, 1725
Bbv12I	GWGCWC	3 cut(s)	147, 544, 2521
BccI	CCATC	8 cut(s)	401, 896, 1220, 1742, 1853, 2069, 2110, 2238
BceAI	ACGGC	1 cut(s)	1584
BciT130I	CCWGG	5 cut(s)	215, 358, 1878, 1886, 2241
BclI	TGATCA	2 cut(s)	2002, 2661
BcoDI	GTCTC	5 cut(s)	2, 21, 549, 1977, 2409
BcuI	ACTAGT	1 cut(s)	1325
BfaI	CTAG	4 cut(s)	162, 788, 1211, 1326
BfmI	CTRYAG	1 cut(s)	1242
BfoI	RGCGCY	2 cut(s)	93, 758
BfrI	CTTAAG	1 cut(s)	599
BfuAI	ACCTGC	1 cut(s)	1269
BglI	GCCNNNNNGGC	1 cut(s)	98
BlpI	GCTNAGC	1 cut(s)	1269
Bme1390I	CCNGG	5 cut(s)	215, 358, 1878, 1886, 2241
Bme18I	GGWCC	5 cut(s)	217, 565, 952, 2486, 2691
BmeT110I	CYCGRG	2 cut(s)	1233, 1450
BmgBI	CACGTC	1 cut(s)	2445
BmgT120I	GGNCC	8 cut(s)	113, 211, 217, 565, 791, 952, 2486, 2691
BmrFI	CCNGG	5 cut(s)	215, 358, 1878, 1886, 2241
BmrI	ACTGGG	1 cut(s)	2634
BmsI	GCATC	8 cut(s)	824, 877, 1388, 1493, 1774, 2038, 2344, 2478
BmuI	ACTGGG	1 cut(s)	2634
BpiI	GAAGAC	4 cut(s)	1415, 1612, 1661, 1725
BplI	GAGNNNNNCTC	2 cut(s)	176, 208
BpmI	CTGGAG	1 cut(s)	1623
Bpu10I	CCTNAGC	1 cut(s)	2540
Bpu1102I	GCTNAGC	1 cut(s)	1269
Bpu14I	TTCGAA	1 cut(s)	2697
BsaAI	YACGTR	1 cut(s)	614
BsaBI	GATNNNNATC	2 cut(s)	783, 2358
BsaHI	GRCGYC	1 cut(s)	755
BsaI	GGTCTC	2 cut(s)	2, 549
BsaJI	CCNNGG	6 cut(s)	574, 801, 1876, 1884, 2239, 2482
BsaXI	ACNNNNNCTCC	4 cut(s)	239, 269, 2156, 2186
Bsc4I	CCNNNNNNNGG	5 cut(s)	575, 1451, 1752, 2245, 2246
Bse118I	RCCGGY	1 cut(s)	270
Bse1I	ACTGG	1 cut(s)	2629
Bse21I	CCTNAGG	1 cut(s)	309
Bse3DI	GCAATG	2 cut(s)	1125, 2426
Bse8I	GATNNNNATC	2 cut(s)	783, 2358
BseBI	CCWGG	5 cut(s)	215, 358, 1878, 1886, 2241
BseDI	CCNNGG	6 cut(s)	574, 801, 1876, 1884, 2239, 2482
BseJI	GATNNNNATC	2 cut(s)	783, 2358
BseLI	CCNNNNNNNGG	5 cut(s)	575, 1451, 1752, 2245, 2246
BseMI	GCAATG	2 cut(s)	1125, 2426
BseMII	CTCAG	9 cut(s)	300, 486, 828, 1151, 1283, 1374, 2373, 2420, 2554
BseNI	ACTGG	1 cut(s)	2629
BseRI	GAGGAG	3 cut(s)	263, 266, 466
BsgI	GTGCAG	2 cut(s)	686, 1962
Bsh1285I	CGRYCG	1 cut(s)	151
BshFI	GGCC	5 cut(s)	114, 213, 356, 793, 1599
BshNI	GGYRCC	2 cut(s)	754, 2092
BsiEI	CGRYCG	1 cut(s)	151
BsiHKAI	GWGCWC	3 cut(s)	147, 544, 2521
BsiHKCI	CYCGRG	2 cut(s)	1233, 1450
BsiSI	CCGG	3 cut(s)	245, 271, 994
BslFI	GGGAC	2 cut(s)	252, 2076
BslI	CCNNNNNNNGG	5 cut(s)	575, 1451, 1752, 2245, 2246
BsmAI	GTCTC	5 cut(s)	2, 21, 549, 1977, 2409
BsmBI	CGTCTC	1 cut(s)	21
BsmFI	GGGAC	2 cut(s)	252, 2076
BsmI	GAATGC	1 cut(s)	691
BsnI	GGCC	5 cut(s)	114, 213, 356, 793, 1599
Bso31I	GGTCTC	2 cut(s)	2, 549
BsoBI	CYCGRG	2 cut(s)	1233, 1450
Bsp119I	TTCGAA	1 cut(s)	2697
Bsp1286I	GDGCHC	3 cut(s)	147, 544, 2521
Bsp143I	GATC	7 cut(s)	784, 1093, 1679, 1684, 2002, 2661, 2701
Bsp1720I	GCTNAGC	1 cut(s)	1269
BspANI	GGCC	5 cut(s)	114, 213, 356, 793, 1599
BspCNI	CTCAG	9 cut(s)	301, 487, 829, 1152, 1282, 1373, 2374, 2419, 2553
BspHI	TCATGA	2 cut(s)	1810, 2658
BspMI	ACCTGC	1 cut(s)	1269
BspPI	GGATC	3 cut(s)	792, 1088, 1101
BspQI	GCTCTTC	2 cut(s)	1536, 2121
BspT104I	TTCGAA	1 cut(s)	2697
BspT107I	GGYRCC	2 cut(s)	754, 2092
BspTI	CTTAAG	1 cut(s)	599
BspTNI	GGTCTC	2 cut(s)	2, 549
BsrDI	GCAATG	2 cut(s)	1125, 2426
BsrFI	RCCGGY	1 cut(s)	270
BsrI	ACTGG	1 cut(s)	2629
BssAI	RCCGGY	1 cut(s)	270
BssECI	CCNNGG	6 cut(s)	574, 801, 1876, 1884, 2239, 2482
BssMI	GATC	7 cut(s)	784, 1093, 1679, 1684, 2002, 2661, 2701
BssNI	GRCGYC	1 cut(s)	755
BssSI	CACGAG	1 cut(s)	516
BssT1I	CCWWGG	2 cut(s)	574, 2482
Bst2BI	CACGAG	1 cut(s)	516
Bst2UI	CCWGG	5 cut(s)	215, 358, 1878, 1886, 2241
Bst4CI	ACNGT	5 cut(s)	365, 442, 1422, 1697, 2045
Bst6I	CTCTTC	9 cut(s)	177, 195, 228, 599, 705, 1536, 2121, 2318, 2613
BstACI	GRCGYC	1 cut(s)	755
BstAFI	CTTAAG	1 cut(s)	599
BstAPI	GCANNNNNTGC	3 cut(s)	1261, 2585, 2588
BstBAI	YACGTR	1 cut(s)	614
BstBI	TTCGAA	1 cut(s)	2697
BstC8I	GCNNGC	3 cut(s)	1266, 1868, 2477
BstDSI	CCRYGG	1 cut(s)	801
BstENI	CCTNNNNNAGG	1 cut(s)	573
BstH2I	RGCGCY	2 cut(s)	93, 758
BstHHI	GCGC	4 cut(s)	92, 757, 981, 1194
BstKTI	GATC	7 cut(s)	787, 1096, 1682, 1687, 2005, 2664, 2704
BstMAI	GTCTC	5 cut(s)	2, 21, 549, 1977, 2409
BstMBI	GATC	7 cut(s)	784, 1093, 1679, 1684, 2002, 2661, 2701
BstMCI	CGRYCG	1 cut(s)	151
BstNI	CCWGG	5 cut(s)	215, 358, 1878, 1886, 2241
BstNSI	RCATGY	3 cut(s)	1268, 2372, 2479
BstSCI	CCNGG	5 cut(s)	213, 356, 1876, 1884, 2239
BstSFI	CTRYAG	1 cut(s)	1242
BstSNI	TACGTA	1 cut(s)	614
BstV2I	GAAGAC	4 cut(s)	1415, 1612, 1661, 1725
BstX2I	RGATCY	2 cut(s)	784, 1093
BstXI	CCANNNNNNTGG	1 cut(s)	1226
BstYI	RGATCY	2 cut(s)	784, 1093
Bsu36I	CCTNAGG	1 cut(s)	309
BsuRI	GGCC	5 cut(s)	114, 213, 356, 793, 1599
BtgI	CCRYGG	1 cut(s)	801
BtrI	CACGTC	1 cut(s)	2445
BtsIMutI	CAGTG	3 cut(s)	1854, 2050, 2258
BveI	ACCTGC	1 cut(s)	1269
Cac8I	GCNNGC	3 cut(s)	1266, 1868, 2477
CaiI	CAGNNNCTG	3 cut(s)	220, 1261, 1511
CciI	TCATGA	2 cut(s)	1810, 2658
CfoI	GCGC	4 cut(s)	92, 757, 981, 1194
Cfr10I	RCCGGY	1 cut(s)	270
Cfr13I	GGNCC	8 cut(s)	113, 211, 217, 565, 791, 952, 2486, 2691
CseI	GACGC	1 cut(s)	1958
Csp6I	GTAC	4 cut(s)	611, 1230, 2093, 2264
CviQI	GTAC	4 cut(s)	611, 1230, 2093, 2264
DinI	GGCGCC	1 cut(s)	756
DpnI	GATC	7 cut(s)	786, 1095, 1681, 1686, 2004, 2663, 2703
DpnII	GATC	7 cut(s)	784, 1093, 1679, 1684, 2002, 2661, 2701
Eam1104I	CTCTTC	9 cut(s)	177, 195, 228, 599, 705, 1536, 2121, 2318, 2613
EarI	CTCTTC	9 cut(s)	177, 195, 228, 599, 705, 1536, 2121, 2318, 2613
EciI	GGCGGA	1 cut(s)	395
Ecl136II	GAGCTC	2 cut(s)	145, 2519
Eco105I	TACGTA	1 cut(s)	614
Eco130I	CCWWGG	2 cut(s)	574, 2482
Eco24I	GRGCYC	2 cut(s)	147, 2521
Eco31I	GGTCTC	2 cut(s)	2, 549
Eco47I	GGWCC	5 cut(s)	217, 565, 952, 2486, 2691
Eco53kI	GAGCTC	2 cut(s)	145, 2519
Eco57I	CTGAAG	3 cut(s)	960, 1533, 1899
Eco81I	CCTNAGG	1 cut(s)	309
Eco88I	CYCGRG	2 cut(s)	1233, 1450
EcoICRI	GAGCTC	2 cut(s)	145, 2519
EcoNI	CCTNNNNNAGG	1 cut(s)	573
EcoO109I	RGGNCCY	3 cut(s)	113, 217, 791
EcoRI	GAATTC	2 cut(s)	1288, 2492
EcoRII	CCWGG	5 cut(s)	213, 356, 1876, 1884, 2239
EcoT14I	CCWWGG	2 cut(s)	574, 2482
EcoT38I	GRGCYC	2 cut(s)	147, 2521
EgeI	GGCGCC	1 cut(s)	756
EheI	GGCGCC	1 cut(s)	756
ErhI	CCWWGG	2 cut(s)	574, 2482
Esp3I	CGTCTC	1 cut(s)	21
FalI	AAGNNNNNCTT	8 cut(s)	528, 560, 636, 668, 1509, 1541, 2322, 2354
FaqI	GGGAC	2 cut(s)	252, 2076
FauI	CCCGC	1 cut(s)	2638
FauNDI	CATATG	1 cut(s)	694
FbaI	TGATCA	2 cut(s)	2002, 2661
FblI	GTMKAC	1 cut(s)	40
FriOI	GRGCYC	2 cut(s)	147, 2521
FspBI	CTAG	4 cut(s)	162, 788, 1211, 1326
FspI	TGCGCA	1 cut(s)	980
GlaI	GCGC	4 cut(s)	91, 756, 980, 1193
GsuI	CTGGAG	1 cut(s)	1623
HaeII	RGCGCY	2 cut(s)	93, 758
HaeIII	GGCC	5 cut(s)	114, 213, 356, 793, 1599
HapII	CCGG	3 cut(s)	245, 271, 994
HgaI	GACGC	1 cut(s)	1958
HhaI	GCGC	4 cut(s)	92, 757, 981, 1194
Hin1I	GRCGYC	1 cut(s)	755
Hin6I	GCGC	4 cut(s)	90, 755, 979, 1192
HinP1I	GCGC	4 cut(s)	90, 755, 979, 1192
HincII	GTYRAC	1 cut(s)	1357
HindII	GTYRAC	1 cut(s)	1357
HindIII	AAGCTT	1 cut(s)	1101
HpaI	GTTAAC	1 cut(s)	1357
HpaII	CCGG	3 cut(s)	245, 271, 994
HphI	GGTGA	2 cut(s)	545, 1709
Hpy166II	GTNNAC	4 cut(s)	41, 1357, 1466, 2256
Hpy8I	GTNNAC	4 cut(s)	41, 1357, 1466, 2256
Hpy99I	CGWCG	3 cut(s)	35, 182, 287
HpyCH4III	ACNGT	5 cut(s)	365, 442, 1422, 1697, 2045
HpyCH4IV	ACGT	4 cut(s)	613, 1480, 2262, 2444
HpySE526I	ACGT	4 cut(s)	613, 1480, 2262, 2444
Hsp92I	GRCGYC	1 cut(s)	755
HspAI	GCGC	4 cut(s)	90, 755, 979, 1192
KasI	GGCGCC	1 cut(s)	754
KpnI	GGTACC	1 cut(s)	2096
Ksp22I	TGATCA	2 cut(s)	2002, 2661
KspAI	GTTAAC	1 cut(s)	1357
Kzo9I	GATC	7 cut(s)	784, 1093, 1679, 1684, 2002, 2661, 2701
LguI	GCTCTTC	2 cut(s)	1536, 2121
LweI	GCATC	8 cut(s)	824, 877, 1388, 1493, 1774, 2038, 2344, 2478
MaeI	CTAG	4 cut(s)	162, 788, 1211, 1326
MaeII	ACGT	4 cut(s)	613, 1480, 2262, 2444
MaeIII	GTNAC	3 cut(s)	1304, 2232, 2550
MalI	GATC	7 cut(s)	786, 1095, 1681, 1686, 2004, 2663, 2703
MboI	GATC	7 cut(s)	784, 1093, 1679, 1684, 2002, 2661, 2701
MfeI	CAATTG	1 cut(s)	1559
MflI	RGATCY	2 cut(s)	784, 1093
MhlI	GDGCHC	3 cut(s)	147, 544, 2521
MluCI	AATT	8 cut(s)	821, 920, 1067, 1288, 1559, 1585, 1772, 2492
Mly113I	GGCGCC	1 cut(s)	755
MlyI	GAGTC	4 cut(s)	167, 263, 506, 1150
MmeI	TCCRAC	4 cut(s)	201, 462, 507, 2494
MroXI	GAANNNNTTC	2 cut(s)	2284, 2414
MslI	CAYNNNNRTG	4 cut(s)	1263, 2310, 2474, 2657
MspA1I	CMGCKG	2 cut(s)	1273, 2090
MspCI	CTTAAG	1 cut(s)	599
MspI	CCGG	3 cut(s)	245, 271, 994
MspR9I	CCNGG	5 cut(s)	215, 358, 1878, 1886, 2241
MunI	CAATTG	1 cut(s)	1559
Mva1269I	GAATGC	1 cut(s)	691
MvaI	CCWGG	5 cut(s)	215, 358, 1878, 1886, 2241
NarI	GGCGCC	1 cut(s)	755
NdeI	CATATG	1 cut(s)	694
NdeII	GATC	7 cut(s)	784, 1093, 1679, 1684, 2002, 2661, 2701
NmuCI	GTSAC	1 cut(s)	1304
NsbI	TGCGCA	1 cut(s)	980
NspI	RCATGY	3 cut(s)	1268, 2372, 2479
NspV	TTCGAA	1 cut(s)	2697
PaeI	GCATGC	2 cut(s)	1268, 2479
PaeR7I	CTCGAG	1 cut(s)	1233
PagI	TCATGA	2 cut(s)	1810, 2658
PaqCI	CACCTGC	1 cut(s)	1269
PciI	ACATGT	1 cut(s)	2368
PciSI	GCTCTTC	2 cut(s)	1536, 2121
PcsI	WCGNNNNNNNCGW	2 cut(s)	282, 291
PctI	GAATGC	1 cut(s)	691
PdmI	GAANNNNTTC	2 cut(s)	2284, 2414
PflFI	GACNNNGTC	1 cut(s)	281
PleI	GAGTC	4 cut(s)	167, 262, 505, 1150
PluTI	GGCGCC	1 cut(s)	758
PpsI	GAGTC	4 cut(s)	167, 262, 505, 1150
Ppu21I	YACGTR	1 cut(s)	614
PpuMI	RGGWCCY	1 cut(s)	217
PscI	ACATGT	1 cut(s)	2368
PshBI	ATTAAT	1 cut(s)	1775
Psp124BI	GAGCTC	2 cut(s)	147, 2521
Psp5II	RGGWCCY	1 cut(s)	217
Psp6I	CCWGG	5 cut(s)	213, 356, 1876, 1884, 2239
PspGI	CCWGG	5 cut(s)	213, 356, 1876, 1884, 2239
PspPI	GGNCC	8 cut(s)	113, 211, 217, 565, 791, 952, 2486, 2691
PspPPI	RGGWCCY	1 cut(s)	217
PspXI	VCTCGAGB	1 cut(s)	1233
PsrI	GAACNNNNNNTAC	2 cut(s)	2064, 2096
PstNI	CAGNNNCTG	3 cut(s)	220, 1261, 1511
PsuI	RGATCY	2 cut(s)	784, 1093
PsyI	GACNNNGTC	1 cut(s)	281
PvuII	CAGCTG	1 cut(s)	1273
RsaI	GTAC	4 cut(s)	612, 1231, 2094, 2265
RsaNI	GTAC	4 cut(s)	611, 1230, 2093, 2264
RseI	CAYNNNNRTG	4 cut(s)	1263, 2310, 2474, 2657
SacI	GAGCTC	2 cut(s)	147, 2521
SapI	GCTCTTC	2 cut(s)	1536, 2121
Sau3AI	GATC	7 cut(s)	784, 1093, 1679, 1684, 2002, 2661, 2701
Sau96I	GGNCC	8 cut(s)	113, 211, 217, 565, 791, 952, 2486, 2691
SchI	GAGTC	4 cut(s)	167, 263, 506, 1150
ScrFI	CCNGG	5 cut(s)	215, 358, 1878, 1886, 2241
SduI	GDGCHC	3 cut(s)	147, 544, 2521
SfaNI	GCATC	8 cut(s)	824, 877, 1388, 1493, 1774, 2038, 2344, 2478
SfcI	CTRYAG	1 cut(s)	1242
SfoI	GGCGCC	1 cut(s)	756
Sfr274I	CTCGAG	1 cut(s)	1233
SfuI	TTCGAA	1 cut(s)	2697
SinI	GGWCC	5 cut(s)	217, 565, 952, 2486, 2691
SlaI	CTCGAG	1 cut(s)	1233
SmiMI	CAYNNNNRTG	4 cut(s)	1263, 2310, 2474, 2657
SmlI	CTYRAG	2 cut(s)	599, 1233
SmoI	CTYRAG	2 cut(s)	599, 1233
SnaBI	TACGTA	1 cut(s)	614
SpeI	ACTAGT	1 cut(s)	1325
SphI	GCATGC	2 cut(s)	1268, 2479
Sse9I	AATT	8 cut(s)	821, 920, 1067, 1288, 1559, 1585, 1772, 2492
SspDI	GGCGCC	1 cut(s)	754
SspI	AATATT	1 cut(s)	2562
SspMI	CTAG	4 cut(s)	162, 788, 1211, 1326
SstI	GAGCTC	2 cut(s)	147, 2521
StyD4I	CCNGG	5 cut(s)	213, 356, 1876, 1884, 2239
StyI	CCWWGG	2 cut(s)	574, 2482
TaaI	ACNGT	5 cut(s)	365, 442, 1422, 1697, 2045
TaiI	ACGT	4 cut(s)	616, 1483, 2265, 2447
TaqII	GACCGA	1 cut(s)	2679
TasI	AATT	8 cut(s)	821, 920, 1067, 1288, 1559, 1585, 1772, 2492
TauI	GCSGC	1 cut(s)	2725
TscAI	CASTG	3 cut(s)	1861, 2050, 2258
TseFI	GTSAC	1 cut(s)	1304
Tsp45I	GTSAC	1 cut(s)	1304
TspGWI	ACGGA	4 cut(s)	48, 61, 790, 1165
TspRI	CASTG	3 cut(s)	1861, 2050, 2258
Tth111I	GACNNNGTC	1 cut(s)	281
Vha464I	CTTAAG	1 cut(s)	599
VpaK11BI	GGWCC	5 cut(s)	217, 565, 952, 2486, 2691
VspI	ATTAAT	1 cut(s)	1775
XagI	CCTNNNNNAGG	1 cut(s)	573
XapI	RAATTY	4 cut(s)	821, 1288, 1585, 2492
XbaI	TCTAGA	1 cut(s)	1210
XceI	RCATGY	3 cut(s)	1268, 2372, 2479
XcmI	CCANNNNNNNNNTGG	1 cut(s)	581
XhoI	CTCGAG	1 cut(s)	1233
XmiI	GTMKAC	1 cut(s)	40
XmnI	GAANNNNTTC	2 cut(s)	2284, 2414
XspI	CTAG	4 cut(s)	162, 788, 1211, 1326

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.