Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0011868

Physical Location & Seq

Genomic Coordinates Forward (+)

16902475 .. 16905294

Gene Structure 2820 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G42270.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2115 bp

ATGGCGACCACATCATCAAACCCATTACTACTTTCTTCAAATTTCCTCGGTTCTCAAATTATAATCTCAGCTCCAACACCAAAAACCACCACAAAGTCTCTTCCTTTCTCAGTAATCTCTCGAAAAAGATACCAAATTTCTCAATCGGAGAAGCTAATGAAATCGTTACCATCACAAGCTGCGTTAGCAGCTCTGTTGTTCTCATCTTCATCTCCACAAGCTTTAGCAGTTAACGAACCAGTTCAACCACCAGCACCAACCATTACTGCTGAAGCTCAATCACCAAATCTGTCGACTTTTGGTCAAAACGTTTTGATGACAGCACCGAATCCACAAGCTCAATCATCAGATCTTCCTGATGGAACACAATGGCGATACAGTGAGTTTCTAAATGCTGTGAAGAAAGGTAAAGTTGAGAGAGTGAAGTTTAGTAAAGATGGTTCTGTTCTTCAGTTAACAGCTGTTGATAATCGTCGTGCTACTGTTATTGTTCCTAATGATCCTGATTTGATTGATATCTTGGCGATGAATGGTGTTGATATATCTGTTTCTGAAGGAGAAGGTGGAAATGGGTTGTTTGATTTCATTGGTAATTTGCTTTTTCCTTTGTTGGCTTTTGGAGGGTTGTTTTATCTCTTTAGAGGAGGTCAAGGAGGTGCTGGTGGTCCTGGAGGTTTAGGAGGTCCTATGGATTTCGGAAGATCGAAATCGAAGTTTCAGGAAGTGCCTGAAACCGGTGTGACATTTGGTGATGTTGCTGGAGCTGATCAAGCTAAGCTTGAGTTACAAGAAGTTGTTGATTTCTTGAAGAATCCTGATAAGTATACTGCGTTAGGTGCTAAGATTCCTAAAGGTTGTTTGTTGGTTGGTCCACCGGGTACGGGGAAGACGCTTTTGGCTAGAGCTGTGGCTGGAGAAGCTGGAGTGCCGTTCTTTTCGTGTGCTGCTTCGGAGTTTGTTGAGCTTTTTGTTGGTGTGGGTGCTTCTAGAGTTAGGGATTTATTTGAGAAGGCGAAATCGAAAGCTCCTTGTATTGTGTTTATTGATGAGATTGATGCTGTTGGTAGACAAAGAGGAGCTGGGATGGGTGGTGGAAATGATGAGAGGGAACAGACTATTAATCAGCTTTTGACTGAGATGGATGGGTTTTCTGGTAACTCTGGTGTCATTGTGTTGGCTGCCACTAATAGACCGGATGTTCTTGACTCCGCGTTGCTGAGACCTGGTAGATTTGACCGGCAAGTCACAGTGGATAGGCCTGATGTAGCCGGAAGAGTTCAGATCCTTAAGGTGCATTCTAGAGGAAAAGCTATTGGGAAGGATGTTGATTACGAAAAAGTTGCGAGGAGAACTCCGGGTTTCACTGGTGCTGATTTGCAGAACCTGATGAATGAAGCTGCGATTCTTGCTGCTAGACGTGAGCTTAAGGAGATAAGCAAGGATGAAATATCTGATGCTCTTGAGAGGATCATTGCTGGACCTGAAAAGAAGAACGCTGTTGTCTCTGAGGAGAAGAAAAGACTTGTTGCTTACCATGAGGCTGGGCATGCTTTAGTTGGTGCACTTATGCCGGAGTATGATCCAGTGGCCAAGATATCGATTATTCCACGTGGCCAAGCTGGTGGGCTCACCTTTTTCGCTCCTAGCGAAGAGAGGCTAGAGTCCGGATTGTATAGCAGAAGCTACCTTGAGAACCAAATGGCTGTTGCACTTGGTGGAAGGGTTGCAGAAGAGGTGATCTTTGGAGACGAGAATGTGACAACCGGAGCATCAAATGATTTCATGCAAGTGTCGCGGGTGGCTCGCCAAATGGTTGAGAGATTCGGGTTCAGCAAAAAGATTGGACAAGTTGCAGTTGGTGGAGCAGGAGGAAACCCTTTCTTGGGTCAAAGTATGTCATCGCAGAAGGATTACTCGATGGCAACAGCGGATGTGGTTGATGCGGAAGTGAGAGAGCTCGTTGAGAAGGCGTACGTGAGAGCGAAAGAGATCATAACAACACAAATTGATATCCTACACAAGCTTGCACAGCTCCTTATTGAGAAAGAAACTGTGGATGGAGAAGAGTTCATGAGTCTTTTCATTGACGGACAAGCCGAGTTATATGTTTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006091 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009056 GO:0009057 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009628 GO:0009642 GO:0009644 GO:0009719 GO:0009725 GO:0009735 GO:0009765 GO:0009892 GO:0009941 GO:0009987 GO:0010033 GO:0010109 GO:0010205 GO:0010206 GO:0010304 GO:0015979 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0019538 GO:0019684 GO:0022607 GO:0030091 GO:0030163 GO:0031323 GO:0031324 GO:0031967 GO:0031975 GO:0031976 GO:0031977 GO:0031984 GO:0034357 GO:0034622 GO:0042221 GO:0042548 GO:0042623 GO:0042651 GO:0043155 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043467 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0048519 GO:0048523 GO:0048564 GO:0050789 GO:0050794 GO:0050896 GO:0055035 GO:0065003 GO:0065007 GO:0070011 GO:0071704 GO:0071840 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1905156

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA Peptidase_M41

Protein Analysis

704

Amino Acids

75.23

Weight (kDa)

5.37

Isoelectric Point (pI)

36.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA	PF00004	286 - 418	1.5e-45	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	441 - 484	7.5e-16	AAA+ lid domain
Peptidase_M41	PF01434	500 - 692	1.4e-71	Peptidase family M41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011868)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50250 AT5G42270
fragaria_vesca	FvH4_2g37610 FvH4_2g37610 FvH4_2g37610 FvH4_2g37610
malus_domestica	MD08G1003700.v1.1 MD15G1003200.v1.1
prunus_persica	Prupe.1G355600_v2.0.a1 Prupe.1G355600_v2.0.a1
pyrus_communis	pycom15g00230
rosa_chinensis	RchiOBHm_Chr6g0304121
rosa_laevigata	RLG00000011013
rosa_multiflora	Rmu_ssc0000218.1_g000001 Rmu_ssc0000218.1_g000004
rosa_roxburghii	Rroxscaffold_7G00164050
rosa_rugosa	Rorug06G0327800
rosa_samantha	Rh6BG461000
rosa_wichuraiana	Rw6G038290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	62
AasI	GACNNNNNNGTC	1 cut(s)	1241
AccI	GTMKAC	3 cut(s)	293, 824, 1066
AccII	CGCG	2 cut(s)	1211, 1795
AccIII	TCCGGA	1 cut(s)	1664
AciI	CCGC	4 cut(s)	1209, 1795, 1928, 1943
AclI	AACGTT	1 cut(s)	309
AclWI	GGATC	4 cut(s)	494, 1276, 1475, 1574
AcoI	YGGCCR	2 cut(s)	1587, 1612
AcsI	RAATTY	2 cut(s)	40, 135
AcuI	CTGAAG	3 cut(s)	291, 434, 573
AcvI	CACGTG	1 cut(s)	1610
AdeI	CACNNNGTG	1 cut(s)	1715
AfaI	GTAC	2 cut(s)	880, 1973
AfiI	CCNNNNNNNGG	4 cut(s)	734, 881, 1882, 1883
AflII	CTTAAG	2 cut(s)	1286, 1424
AgeI	ACCGGT	1 cut(s)	734
AgsI	TTSAA	3 cut(s)	39, 245, 808
AhdI	GACNNNNNGTC	1 cut(s)	300
AjiI	CACGTC	1 cut(s)	1418
AjnI	CCWGG	2 cut(s)	667, 1222
AjuI	GAANNNNNNNTTGG	2 cut(s)	878, 910
Alw21I	GWGCWC	2 cut(s)	1564, 1959
Alw26I	GTCTC	4 cut(s)	102, 1213, 1507, 1740
Alw44I	GTGCAC	1 cut(s)	1560
AlwI	GGATC	4 cut(s)	494, 1276, 1475, 1574
AlwNI	CAGNNNCTG	1 cut(s)	1384
Aor13HI	TCCGGA	1 cut(s)	1664
AoxI	GGCC	3 cut(s)	1256, 1587, 1612
ApaLI	GTGCAC	1 cut(s)	1560
ApeKI	GCWGC	6 cut(s)	179, 188, 944, 1178, 1397, 1409
ApoI	RAATTY	2 cut(s)	40, 135
AseI	ATTAAT	1 cut(s)	1119
AsiGI	ACCGGT	1 cut(s)	734
Asp700I	GAANNNNTTC	1 cut(s)	240
AspS9I	GGNCC	4 cut(s)	665, 683, 869, 1478
AsuC2I	CCSGG	2 cut(s)	876, 1356
AsuHPI	GGTGA	4 cut(s)	273, 761, 1621, 1747
AvaII	GGWCC	4 cut(s)	665, 683, 869, 1478
BaeGI	GKGCMC	1 cut(s)	1564
BalI	TGGCCA	2 cut(s)	1589, 1614
BanII	GRGCYC	2 cut(s)	1629, 1959
BbrPI	CACGTG	1 cut(s)	1610
BbsI	GAAGAC	1 cut(s)	893
Bbv12I	GWGCWC	2 cut(s)	1564, 1959
BbvI	GCAGC	6 cut(s)	166, 200, 931, 1165, 1384, 1396
BccI	CCATC	8 cut(s)	178, 353, 431, 1078, 1132, 1136, 1912, 2051
BceAI	ACGGC	1 cut(s)	913
BcgI	CGANNNNNNTGC	2 cut(s)	1322, 1356
BciT130I	CCWGG	2 cut(s)	669, 1224
BclI	TGATCA	1 cut(s)	766
BcnI	CCSGG	2 cut(s)	876, 1356
BcoDI	GTCTC	4 cut(s)	102, 1213, 1507, 1740
BfaI	CTAG	6 cut(s)	900, 987, 1299, 1413, 1644, 1658
BfrI	CTTAAG	2 cut(s)	1286, 1424
BglII	AGATCT	1 cut(s)	349
BisI	GCNGC	6 cut(s)	180, 189, 945, 1179, 1398, 1410
BlpI	GCTNAGC	1 cut(s)	774
BlsI	GCNGC	6 cut(s)	181, 190, 946, 1180, 1399, 1411
Bme1390I	CCNGG	4 cut(s)	669, 876, 1224, 1356
Bme18I	GGWCC	4 cut(s)	665, 683, 869, 1478
BmeRI	GACNNNNNGTC	1 cut(s)	300
BmgBI	CACGTC	1 cut(s)	1418
BmgT120I	GGNCC	4 cut(s)	665, 683, 869, 1478
BmrFI	CCNGG	4 cut(s)	669, 876, 1224, 1356
BmsI	GCATC	4 cut(s)	1045, 1444, 1778, 1930
BpiI	GAAGAC	1 cut(s)	893
BplI	GAGNNNNNCTC	2 cut(s)	1336, 1368
BpmI	CTGGAG	4 cut(s)	690, 780, 933, 942
Bpu1102I	GCTNAGC	1 cut(s)	774
BpuEI	CTTGAG	3 cut(s)	800, 1481, 1709
BpuMI	CCSGG	2 cut(s)	876, 1356
Bsa29I	ATCGAT	1 cut(s)	1598
BsaAI	YACGTR	2 cut(s)	1610, 1975
BsaBI	GATNNNNATC	2 cut(s)	515, 706
BsaI	GGTCTC	1 cut(s)	1213
BsaJI	CCNNGG	1 cut(s)	46
BsaWI	WCCGGW	4 cut(s)	734, 1192, 1664, 1763
Bsc4I	CCNNNNNNNGG	4 cut(s)	734, 881, 1882, 1883
Bse118I	RCCGGY	2 cut(s)	734, 1236
Bse1I	ACTGG	3 cut(s)	239, 1369, 1583
Bse3DI	GCAATG	1 cut(s)	1470
Bse8I	GATNNNNATC	2 cut(s)	515, 706
BseAI	TCCGGA	1 cut(s)	1664
BseBI	CCWGG	2 cut(s)	669, 1224
BseCI	ATCGAT	1 cut(s)	1598
BseDI	CCNNGG	1 cut(s)	46
BseGI	GGATG	7 cut(s)	1089, 1147, 1201, 1327, 1447, 1936, 2062
BseJI	GATNNNNATC	2 cut(s)	515, 706
BseLI	CCNNNNNNNGG	4 cut(s)	734, 881, 1882, 1883
BseMI	GCAATG	1 cut(s)	1470
BseMII	CTCAG	5 cut(s)	81, 123, 1125, 1208, 1497
BseNI	ACTGG	3 cut(s)	239, 1369, 1583
BseRI	GAGGAG	4 cut(s)	657, 1089, 1360, 1523
BseSI	GKGCMC	1 cut(s)	1564
BseXI	GCAGC	6 cut(s)	166, 200, 931, 1165, 1384, 1396
BseYI	CCCAGC	2 cut(s)	1079, 1541
Bsh1236I	CGCG	2 cut(s)	1211, 1795
BshFI	GGCC	3 cut(s)	1258, 1589, 1614
BshTI	ACCGGT	1 cut(s)	734
BshVI	ATCGAT	1 cut(s)	1598
BsiHKAI	GWGCWC	2 cut(s)	1564, 1959
BsiSI	CCGG	9 cut(s)	735, 875, 1193, 1237, 1269, 1355, 1571, 1665, 1764
BsiWI	CGTACG	1 cut(s)	1971
BslI	CCNNNNNNNGG	4 cut(s)	734, 881, 1882, 1883
BsmAI	GTCTC	4 cut(s)	102, 1213, 1507, 1740
BsmBI	CGTCTC	1 cut(s)	1740
BsmI	GAATGC	1 cut(s)	1294
BsnI	GGCC	3 cut(s)	1258, 1589, 1614
Bso31I	GGTCTC	1 cut(s)	1213
Bsp1286I	GDGCHC	3 cut(s)	1564, 1629, 1959
Bsp13I	TCCGGA	1 cut(s)	1664
Bsp143I	GATC	9 cut(s)	349, 499, 701, 766, 1281, 1467, 1579, 1737, 1989
Bsp1720I	GCTNAGC	1 cut(s)	774
BspACI	CCGC	4 cut(s)	1209, 1795, 1928, 1943
BspANI	GGCC	3 cut(s)	1258, 1589, 1614
BspCNI	CTCAG	5 cut(s)	80, 122, 1126, 1209, 1498
BspDI	ATCGAT	1 cut(s)	1598
BspEI	TCCGGA	1 cut(s)	1664
BspFNI	CGCG	2 cut(s)	1211, 1795
BspHI	TCATGA	1 cut(s)	2070
BspPI	GGATC	4 cut(s)	494, 1276, 1475, 1574
BspTI	CTTAAG	2 cut(s)	1286, 1424
BspTNI	GGTCTC	1 cut(s)	1213
BsrDI	GCAATG	1 cut(s)	1470
BsrFI	RCCGGY	2 cut(s)	734, 1236
BsrI	ACTGG	3 cut(s)	239, 1369, 1583
BssAI	RCCGGY	2 cut(s)	734, 1236
BssECI	CCNNGG	1 cut(s)	46
BssMI	GATC	9 cut(s)	349, 499, 701, 766, 1281, 1467, 1579, 1737, 1989
BssNAI	GTATAC	1 cut(s)	825
Bst1107I	GTATAC	1 cut(s)	825
Bst2UI	CCWGG	2 cut(s)	669, 1224
Bst4CI	ACNGT	4 cut(s)	380, 484, 1249, 2053
Bst6I	CTCTTC	5 cut(s)	105, 1267, 1644, 1725, 2058
BstAFI	CTTAAG	2 cut(s)	1286, 1424
BstBAI	YACGTR	2 cut(s)	1610, 1975
BstC8I	GCNNGC	3 cut(s)	1548, 1804, 2025
BstDEI	CTNAG	7 cut(s)	67, 109, 774, 840, 1134, 1217, 1506
BstF5I	GGATG	7 cut(s)	1089, 1147, 1201, 1327, 1447, 1936, 2062
BstFNI	CGCG	2 cut(s)	1211, 1795
BstKTI	GATC	9 cut(s)	352, 502, 704, 769, 1284, 1470, 1582, 1740, 1992
BstMAI	GTCTC	4 cut(s)	102, 1213, 1507, 1740
BstMBI	GATC	9 cut(s)	349, 499, 701, 766, 1281, 1467, 1579, 1737, 1989
BstMWI	GCNNNNNNNGC	9 cut(s)	185, 188, 770, 836, 917, 1406, 1547, 1792, 2029
BstNI	CCWGG	2 cut(s)	669, 1224
BstNSI	RCATGY	1 cut(s)	1550
BstSCI	CCNGG	4 cut(s)	667, 874, 1222, 1354
BstSLI	GKGCMC	1 cut(s)	1564
BstUI	CGCG	2 cut(s)	1211, 1795
BstV1I	GCAGC	6 cut(s)	166, 200, 931, 1165, 1384, 1396
BstV2I	GAAGAC	1 cut(s)	893
BstX2I	RGATCY	2 cut(s)	349, 1281
BstXI	CCANNNNNNTGG	2 cut(s)	1541, 1622
BstYI	RGATCY	2 cut(s)	349, 1281
BstZ17I	GTATAC	1 cut(s)	825
Bsu15I	ATCGAT	1 cut(s)	1598
BsuRI	GGCC	3 cut(s)	1258, 1589, 1614
BsuTUI	ATCGAT	1 cut(s)	1598
BtgZI	GCGATG	2 cut(s)	539, 1884
BtrI	CACGTC	1 cut(s)	1418
BtsCI	GGATG	7 cut(s)	1089, 1147, 1201, 1327, 1447, 1936, 2062
BtsIMutI	CAGTG	4 cut(s)	385, 1254, 1362, 1590
Cac8I	GCNNGC	3 cut(s)	1548, 1804, 2025
CaiI	CAGNNNCTG	1 cut(s)	1384
CciI	TCATGA	1 cut(s)	2070
Cfr10I	RCCGGY	2 cut(s)	734, 1236
Cfr13I	GGNCC	4 cut(s)	665, 683, 869, 1478
ClaI	ATCGAT	1 cut(s)	1598
CseI	GACGC	1 cut(s)	898
CsiI	ACCWGGT	1 cut(s)	1222
Csp6I	GTAC	2 cut(s)	879, 1972
CspAI	ACCGGT	1 cut(s)	734
CviAII	CATG	4 cut(s)	1535, 1547, 1783, 2071
CviQI	GTAC	2 cut(s)	879, 1972
DdeI	CTNAG	7 cut(s)	67, 109, 774, 840, 1134, 1217, 1506
DpnI	GATC	9 cut(s)	351, 501, 703, 768, 1283, 1469, 1581, 1739, 1991
DpnII	GATC	9 cut(s)	349, 499, 701, 766, 1281, 1467, 1579, 1737, 1989
DraIII	CACNNNGTG	1 cut(s)	1715
DrdI	GACNNNNNNGTC	1 cut(s)	1241
DriI	GACNNNNNGTC	1 cut(s)	300
DseDI	GACNNNNNNGTC	1 cut(s)	1241
EaeI	YGGCCR	2 cut(s)	1587, 1612
Eam1104I	CTCTTC	5 cut(s)	105, 1267, 1644, 1725, 2058
Eam1105I	GACNNNNNGTC	1 cut(s)	300
EarI	CTCTTC	5 cut(s)	105, 1267, 1644, 1725, 2058
Ecl136II	GAGCTC	1 cut(s)	1957
Eco147I	AGGCCT	1 cut(s)	1258
Eco24I	GRGCYC	2 cut(s)	1629, 1959
Eco31I	GGTCTC	1 cut(s)	1213
Eco32I	GATATC	3 cut(s)	517, 1596, 2011
Eco47I	GGWCC	4 cut(s)	665, 683, 869, 1478
Eco53kI	GAGCTC	1 cut(s)	1957
Eco57I	CTGAAG	3 cut(s)	291, 434, 573
Eco72I	CACGTG	1 cut(s)	1610
EcoICRI	GAGCTC	1 cut(s)	1957
EcoO109I	RGGNCCY	1 cut(s)	683
EcoRII	CCWGG	2 cut(s)	667, 1222
EcoRV	GATATC	3 cut(s)	517, 1596, 2011
EcoT38I	GRGCYC	2 cut(s)	1629, 1959
Esp3I	CGTCTC	1 cut(s)	1740
FaeI	CATG	4 cut(s)	1538, 1550, 1786, 2074
FalI	AAGNNNNNCTT	2 cut(s)	762, 794
FatI	CATG	4 cut(s)	1534, 1546, 1782, 2070
FauI	CCCGC	1 cut(s)	1788
FbaI	TGATCA	1 cut(s)	766
FblI	GTMKAC	3 cut(s)	293, 824, 1066
Fnu4HI	GCNGC	6 cut(s)	180, 189, 945, 1179, 1398, 1410
FokI	GGATG	7 cut(s)	1096, 1154, 1208, 1334, 1454, 1943, 2069
FriOI	GRGCYC	2 cut(s)	1629, 1959
Fsp4HI	GCNGC	6 cut(s)	180, 189, 945, 1179, 1398, 1410
FspBI	CTAG	6 cut(s)	900, 987, 1299, 1413, 1644, 1658
GluI	GCNGC	6 cut(s)	180, 189, 945, 1179, 1398, 1410
GsaI	CCCAGC	2 cut(s)	1083, 1545
GsuI	CTGGAG	4 cut(s)	690, 780, 933, 942
HaeIII	GGCC	3 cut(s)	1258, 1589, 1614
HapII	CCGG	9 cut(s)	735, 875, 1193, 1237, 1269, 1355, 1571, 1665, 1764
HgaI	GACGC	1 cut(s)	898
Hin1II	CATG	4 cut(s)	1538, 1550, 1786, 2074
HincII	GTYRAC	3 cut(s)	232, 294, 456
HindII	GTYRAC	3 cut(s)	232, 294, 456
HindIII	AAGCTT	3 cut(s)	219, 776, 2021
HinfI	GANTC	8 cut(s)	328, 811, 844, 1205, 1402, 1661, 1821, 2074
HpaI	GTTAAC	2 cut(s)	232, 456
HpaII	CCGG	9 cut(s)	735, 875, 1193, 1237, 1269, 1355, 1571, 1665, 1764
HphI	GGTGA	4 cut(s)	273, 761, 1621, 1747
Hpy166II	GTNNAC	7 cut(s)	232, 294, 456, 825, 872, 1067, 1562
Hpy188I	TCNGA	8 cut(s)	148, 349, 553, 698, 952, 1281, 1453, 1507
Hpy8I	GTNNAC	7 cut(s)	232, 294, 456, 825, 872, 1067, 1562
Hpy99I	CGWCG	1 cut(s)	477
HpyAV	CCTTC	7 cut(s)	548, 554, 1003, 1312, 1713, 1900, 1960
HpyCH4III	ACNGT	4 cut(s)	380, 484, 1249, 2053
HpyCH4IV	ACGT	4 cut(s)	309, 1417, 1609, 1974
HpyCH4V	TGCA	8 cut(s)	1294, 1378, 1562, 1709, 1727, 1786, 1853, 2027
HpyF10VI	GCNNNNNNNGC	9 cut(s)	185, 188, 770, 836, 917, 1406, 1547, 1792, 2029
HpyF3I	CTNAG	7 cut(s)	67, 109, 774, 840, 1134, 1217, 1506
HpySE526I	ACGT	4 cut(s)	309, 1417, 1609, 1974
Hsp92II	CATG	4 cut(s)	1538, 1550, 1786, 2074
Kpn2I	TCCGGA	1 cut(s)	1664
Ksp22I	TGATCA	1 cut(s)	766
KspAI	GTTAAC	2 cut(s)	232, 456
Kzo9I	GATC	9 cut(s)	349, 499, 701, 766, 1281, 1467, 1579, 1737, 1989
LmnI	GCTCC	8 cut(s)	76, 761, 1030, 1076, 1645, 1766, 1862, 2037
Lsp1109I	GCAGC	6 cut(s)	166, 200, 931, 1165, 1384, 1396
LweI	GCATC	4 cut(s)	1045, 1444, 1778, 1930
MabI	ACCWGGT	1 cut(s)	1222
MaeI	CTAG	6 cut(s)	900, 987, 1299, 1413, 1644, 1658
MaeII	ACGT	4 cut(s)	309, 1417, 1609, 1974
MaeIII	GTNAC	6 cut(s)	165, 739, 783, 1154, 1243, 1756
MalI	GATC	9 cut(s)	351, 501, 703, 768, 1283, 1469, 1581, 1739, 1991
MboI	GATC	9 cut(s)	349, 499, 701, 766, 1281, 1467, 1579, 1737, 1989
MflI	RGATCY	2 cut(s)	349, 1281
MhlI	GDGCHC	3 cut(s)	1564, 1629, 1959
MlsI	TGGCCA	2 cut(s)	1589, 1614
MluCI	AATT	5 cut(s)	40, 57, 135, 592, 2004
MluNI	TGGCCA	2 cut(s)	1589, 1614
MlyI	GAGTC	3 cut(s)	1199, 1670, 2083
MmeI	TCCRAC	1 cut(s)	98
Mox20I	TGGCCA	2 cut(s)	1589, 1614
MroI	TCCGGA	1 cut(s)	1664
MroXI	GAANNNNTTC	1 cut(s)	240
MscI	TGGCCA	2 cut(s)	1589, 1614
MseI	TTAA	6 cut(s)	231, 455, 1119, 1287, 1425, 2113
MslI	CAYNNNNRTG	1 cut(s)	1787
Msp20I	TGGCCA	2 cut(s)	1589, 1614
MspA1I	CMGCKG	2 cut(s)	461, 1928
MspCI	CTTAAG	2 cut(s)	1286, 1424
MspI	CCGG	9 cut(s)	735, 875, 1193, 1237, 1269, 1355, 1571, 1665, 1764
MspR9I	CCNGG	4 cut(s)	669, 876, 1224, 1356
Mva1269I	GAATGC	1 cut(s)	1294
MvaI	CCWGG	2 cut(s)	669, 1224
MvnI	CGCG	2 cut(s)	1211, 1795
MwoI	GCNNNNNNNGC	9 cut(s)	185, 188, 770, 836, 917, 1406, 1547, 1792, 2029
NciI	CCSGG	2 cut(s)	876, 1356
NdeII	GATC	9 cut(s)	349, 499, 701, 766, 1281, 1467, 1579, 1737, 1989
NlaIII	CATG	4 cut(s)	1538, 1550, 1786, 2074
NmuCI	GTSAC	3 cut(s)	739, 1243, 1756
NspI	RCATGY	1 cut(s)	1550
PaeI	GCATGC	1 cut(s)	1550
PagI	TCATGA	1 cut(s)	2070
PceI	AGGCCT	1 cut(s)	1258
PcsI	WCGNNNNNNNCGW	2 cut(s)	1644, 2094
PctI	GAATGC	1 cut(s)	1294
PdmI	GAANNNNTTC	1 cut(s)	240
PfeI	GAWTC	5 cut(s)	328, 811, 844, 1402, 1821
Pfl23II	CGTACG	1 cut(s)	1971
PfoI	TCCNGGA	1 cut(s)	667
PinAI	ACCGGT	1 cut(s)	734
PkrI	GCNGC	6 cut(s)	181, 190, 946, 1180, 1399, 1411
PleI	GAGTC	3 cut(s)	1199, 1669, 2082
PmaCI	CACGTG	1 cut(s)	1610
PmlI	CACGTG	1 cut(s)	1610
PpsI	GAGTC	3 cut(s)	1199, 1669, 2082
Ppu21I	YACGTR	2 cut(s)	1610, 1975
PpuMI	RGGWCCY	1 cut(s)	683
PshBI	ATTAAT	1 cut(s)	1119
PsiI	TTATAA	1 cut(s)	62
Psp124BI	GAGCTC	1 cut(s)	1959
Psp1406I	AACGTT	1 cut(s)	309
Psp5II	RGGWCCY	1 cut(s)	683
Psp6I	CCWGG	2 cut(s)	667, 1222
PspCI	CACGTG	1 cut(s)	1610
PspFI	CCCAGC	2 cut(s)	1079, 1541
PspGI	CCWGG	2 cut(s)	667, 1222
PspLI	CGTACG	1 cut(s)	1971
PspPI	GGNCC	4 cut(s)	665, 683, 869, 1478
PspPPI	RGGWCCY	1 cut(s)	683
PsrI	GAACNNNNNNTAC	2 cut(s)	424, 456
PstNI	CAGNNNCTG	1 cut(s)	1384
PsuI	RGATCY	2 cut(s)	349, 1281
PvuII	CAGCTG	1 cut(s)	461
RsaI	GTAC	2 cut(s)	880, 1973
RsaNI	GTAC	2 cut(s)	879, 1972
RseI	CAYNNNNRTG	1 cut(s)	1787
SacI	GAGCTC	1 cut(s)	1959
SalI	GTCGAC	1 cut(s)	292
SaqAI	TTAA	6 cut(s)	231, 455, 1119, 1287, 1425, 2113
SatI	GCNGC	6 cut(s)	180, 189, 945, 1179, 1398, 1410
Sau3AI	GATC	9 cut(s)	349, 499, 701, 766, 1281, 1467, 1579, 1737, 1989
Sau96I	GGNCC	4 cut(s)	665, 683, 869, 1478
SchI	GAGTC	3 cut(s)	1199, 1670, 2083
ScrFI	CCNGG	4 cut(s)	669, 876, 1224, 1356
SduI	GDGCHC	3 cut(s)	1564, 1629, 1959
SexAI	ACCWGGT	1 cut(s)	1222
SfaNI	GCATC	4 cut(s)	1045, 1444, 1778, 1930
SinI	GGWCC	4 cut(s)	665, 683, 869, 1478
SmiMI	CAYNNNNRTG	1 cut(s)	1787
SmlI	CTYRAG	5 cut(s)	779, 1286, 1424, 1460, 1688
SmoI	CTYRAG	5 cut(s)	779, 1286, 1424, 1460, 1688
SphI	GCATGC	1 cut(s)	1550
Sse9I	AATT	5 cut(s)	40, 57, 135, 592, 2004
SseBI	AGGCCT	1 cut(s)	1258
SsiI	CCGC	4 cut(s)	1209, 1795, 1928, 1943
SspMI	CTAG	6 cut(s)	900, 987, 1299, 1413, 1644, 1658
SstI	GAGCTC	1 cut(s)	1959
StuI	AGGCCT	1 cut(s)	1258
StyD4I	CCNGG	4 cut(s)	667, 874, 1222, 1354
TaaI	ACNGT	4 cut(s)	380, 484, 1249, 2053
TaiI	ACGT	4 cut(s)	312, 1420, 1612, 1977
TaqI	TCGA	7 cut(s)	121, 293, 704, 710, 1019, 1598, 1916
TasI	AATT	5 cut(s)	40, 57, 135, 592, 2004
TfiI	GAWTC	5 cut(s)	328, 811, 844, 1402, 1821
Tru1I	TTAA	6 cut(s)	231, 455, 1119, 1287, 1425, 2113
Tru9I	TTAA	6 cut(s)	231, 455, 1119, 1287, 1425, 2113
TscAI	CASTG	4 cut(s)	385, 1254, 1369, 1590
TseFI	GTSAC	3 cut(s)	739, 1243, 1756
TseI	GCWGC	6 cut(s)	179, 188, 944, 1178, 1397, 1409
Tsp45I	GTSAC	3 cut(s)	739, 1243, 1756
TspGWI	ACGGA	1 cut(s)	2103
TspRI	CASTG	4 cut(s)	385, 1254, 1369, 1590
Vha464I	CTTAAG	2 cut(s)	1286, 1424
VneI	GTGCAC	1 cut(s)	1560
VpaK11BI	GGWCC	4 cut(s)	665, 683, 869, 1478
VspI	ATTAAT	1 cut(s)	1119
XapI	RAATTY	2 cut(s)	40, 135
XbaI	TCTAGA	2 cut(s)	986, 1298
XceI	RCATGY	1 cut(s)	1550
XmiI	GTMKAC	3 cut(s)	293, 824, 1066
XmnI	GAANNNNTTC	1 cut(s)	240
XspI	CTAG	6 cut(s)	900, 987, 1299, 1413, 1644, 1658

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.