Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0011868

Physical Location & Seq

Genomic Coordinates Reverse (-)

6015095 .. 6017986

Gene Structure 2892 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000011013

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2142 bp

ATGGCTTCCACAACCAACCCTCTACTCTCTTCTAGCTTCTACGGCACTAAAATTCTCCACTCTCCTCCGACCCCCAAAACCACTAGATCATCAGCACCACTCCTTCCTCTTCCTTTCTTCTCCAAACGAAAGCTTGTAATCGCCAAAAATGAAGAACCCAATTCCGACTCCTTCAAATCCATCACATCCCAAGCCACTCTAGCTGGCTTGCTCTTTACTTCACTCACCACCCAACAAGCCCTCGCCGTAGACAACGTCACACCACCGTCACAGCCCGCGCCGCTGCTCCAGGCCCAGCCCACCAAGCCCAATTCCTCTCCTTTCTCTCAGAACCTCAACTTAACGGCACCAAAGCCACAACAGCAGGCCGTTACTGACCTCCCGGAAGGTAGCCAATGGCGCTACAGCGAGTTCTTGAACGCCGTGAAGAAGGGGAAGGTGGAAAGAGTCAGGTTCGCCAAAGAAGGGTCGGCTCTTCAGCTGACGGCGATTGACGGCCGTCGTGCCTCGGTGGTGGTCCCGAACGACCCGGACCTCATCGACATTCTGGCCATGAACGGCGTTGATATCTCCGTCTCCGAGGGAGACTCCGGAGGTGGGATATTCAACTTCATTGGGAATTTGCTGTTTCCGATAATCGCCTTCGCCGGATTGTTCTTCCTTTTCAGGCGGGGACAGGGAGGTCCCGGAGGACCCGGTGGGCTTGGTGGGCCCATGGACTTCGGAAGGTCCAAGTCCAAGTTCCAGGAAGTTCCAGAAACTGGAGTTACTTTCTCTGATGTTGCTGGAGCTGACCAGGCCAAGCTGGAGTTGCAGGAAGTTGTTGATTTCTTGAAGAACCCAGATAAGTACACTGCTCTGGGAGCTAAAATCCCAAAGGGTTGTCTTCTGGTGGGGCCACCCGGTACCGGAAAGACCCTTCTGGCTCGTGCCGTCGCCGGTGAGGCTGGCACGCCTTTCTTCTCGTGCGCAGCTTCGGAGTTCGTGGAGCTGTTTGTTGGAGTTGGGGCCTCGAGAGTGAGGGATTTGTTTGAGAAGGCAAAGTCGAAAGCGCCGTGCATTGTGTTCATTGATGAGATTGATGCAGTAGGGAGGCAGAGAGGGGCAGGAATGGGAGGTGGAAATGACGAGAGAGAACAGACTATTAATCAGTTGTTGACGGAGATGGATGGTTTTTCTGGTAATTCTGGTGTGATTGTGTTGGCGGCGACTAACAGGCCGGATGTTCTTGATTCGGCTCTGTTGAGGCCTGGAAGGTTTGACAGACAAGTAACCGTGGACAGGCCTGATGTTGCTGGGAGAGTTAAGATCCTGCAGGTGCACTCCAGAGGGAAGGCACTGGCAAAGGATGTGGACTTTGAAAAGATTGCAAGGAGAACGCCTGGTTTCACAGGAGCAGATCTACAGAACCTGATGAACGAAGCTGCCATTCTTGCAGCCAGACGTGAGCTCAAGGAAATAAGCAAAGATGAGATAGCTGATGCTCTGGAGCGAATCATTGCCGGACCAGAGAAGAAAAATGCTGTAGTCTCGGAGGAGAAGAAGAAATTAGTTGCTTACCATGAGGCTGGGCATGCTCTTGTTGGTGCCTTGATGCCGGAATATGATCCTGTAGCCAAGATATCCATCATCCCCCGTGGCCAAGCAGGTGGTCTAACCTTCTTTGCTCCAAGTGAAGAGAGACTCGAGTCTGGACTGTACAGCAGAAGCTACCTGGAGAATCAAATGGCTGTTGCCCTTGGAGGAAGGGTGGCTGAAGAAGTTATCTTTGGTCAGGCGAATGTGACAACAGGCGCATCAAATGACTTCATGCAAGTTTCAAGGGTGGCAAGGCAGATGGTCGAGAGATTTGGATTCAGCAAAAAGATCGGACAAGTTGCGGTTGGTAGTTCAGGTGGCAACCCCTTCTTAGGTCAACAGATGTCATCCCAAAAAGATTACTCCATGGCGACAGCTGATATCGTGGATGCAGAGGTGAGGGAGCTGGTAGAGAAAGCTTACAAAAGGGCCACGGAGATCATCACAACCCACATTGACATCCTGCACAAGTTGGCCAACCTCCTGATAGAGAAGGAAAGTGTTGATGGTGAAGAATTCATGAGCCTCTTTATTGATGGAAAGGCTGAGCTATATGTCTCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006091 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009056 GO:0009057 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009628 GO:0009642 GO:0009644 GO:0009719 GO:0009725 GO:0009735 GO:0009765 GO:0009892 GO:0009941 GO:0009987 GO:0010033 GO:0010109 GO:0010205 GO:0010206 GO:0010304 GO:0015979 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0019538 GO:0019684 GO:0022607 GO:0030091 GO:0030163 GO:0031323 GO:0031324 GO:0031967 GO:0031975 GO:0031976 GO:0031977 GO:0031984 GO:0034357 GO:0034622 GO:0042221 GO:0042548 GO:0042623 GO:0042651 GO:0043155 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043467 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0048519 GO:0048523 GO:0048564 GO:0050789 GO:0050794 GO:0050896 GO:0055035 GO:0065003 GO:0065007 GO:0070011 GO:0071704 GO:0071840 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1905156

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA Peptidase_M41

Protein Analysis

714

Amino Acids

76.45

Weight (kDa)

6.23

Isoelectric Point (pI)

38.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA	PF00004	295 - 427	2.9e-45	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	450 - 492	4.1e-16	AAA+ lid domain
Peptidase_M41	PF01434	509 - 701	1.9e-72	Peptidase family M41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011868)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50250 AT5G42270
fragaria_vesca	FvH4_2g37610 FvH4_2g37610 FvH4_2g37610 FvH4_2g37610
malus_domestica	MD08G1003700.v1.1 MD15G1003200.v1.1
prunus_persica	Prupe.1G355600_v2.0.a1 Prupe.1G355600_v2.0.a1
pyrus_communis	pycom15g00230
rosa_chinensis	RchiOBHm_Chr6g0304121
rosa_laevigata	RLG00000011013
rosa_multiflora	Rmu_ssc0000218.1_g000001 Rmu_ssc0000218.1_g000004
rosa_roxburghii	Rroxscaffold_7G00164050
rosa_rugosa	Rorug06G0327800
rosa_samantha	Rh6BG461000
rosa_wichuraiana	Rw6G038290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1306, 1637
AasI	GACNNNNNNGTC	1 cut(s)	681
Acc16I	TGCGCA	1 cut(s)	970
Acc36I	ACCTGC	2 cut(s)	1306, 1637
Acc65I	GGTACC	1 cut(s)	905
AccB1I	GGYRCC	3 cut(s)	346, 905, 1586
AccB7I	CCANNNNNTGG	1 cut(s)	761
AccI	GTMKAC	1 cut(s)	249
AccII	CGCG	1 cut(s)	278
AccIII	TCCGGA	1 cut(s)	590
AciI	CCGC	5 cut(s)	276, 281, 670, 1205, 1880
AclWI	GGATC	2 cut(s)	1303, 1601
AcoI	YGGCCR	4 cut(s)	496, 549, 1639, 2052
AcsI	RAATTY	3 cut(s)	51, 619, 2093
AcuI	CTGAAG	2 cut(s)	461, 1776
AfaI	GTAC	3 cut(s)	851, 907, 1700
AfiI	CCNNNNNNNGG	6 cut(s)	465, 597, 761, 908, 1281, 1910
AgsI	TTSAA	6 cut(s)	175, 418, 607, 835, 1361, 1821
AjiI	CACGTC	1 cut(s)	1445
AjnI	CCWGG	6 cut(s)	288, 744, 795, 1249, 1381, 1713
AjuI	GAANNNNNNNTTGG	4 cut(s)	725, 757, 1752, 1784
Alw21I	GWGCWC	2 cut(s)	1323, 1452
Alw26I	GTCTC	4 cut(s)	579, 580, 1534, 1675
Alw44I	GTGCAC	1 cut(s)	1319
AlwI	GGATC	2 cut(s)	1303, 1601
AlwNI	CAGNNNCTG	2 cut(s)	761, 1411
Ama87I	CYCGRG	2 cut(s)	1012, 1685
Aor13HI	TCCGGA	1 cut(s)	590
ApaI	GGGCCC	1 cut(s)	714
ApaLI	GTGCAC	1 cut(s)	1319
ApeKI	GCWGC	4 cut(s)	283, 971, 1424, 1436
ApoI	RAATTY	3 cut(s)	51, 619, 2093
AseI	ATTAAT	1 cut(s)	1146
Asp718I	GGTACC	1 cut(s)	905
AspLEI	GCGC	5 cut(s)	280, 402, 971, 1054, 1796
AsuC2I	CCSGG	5 cut(s)	383, 530, 687, 696, 903
AsuHPI	GGTGA	4 cut(s)	217, 953, 1987, 2099
AvaI	CYCGRG	2 cut(s)	1012, 1685
AvaII	GGWCC	6 cut(s)	517, 532, 683, 692, 729, 1505
BaeGI	GKGCMC	2 cut(s)	714, 1323
BalI	TGGCCA	3 cut(s)	551, 1641, 2054
BanI	GGYRCC	3 cut(s)	346, 905, 1586
BanII	GRGCYC	2 cut(s)	714, 1452
BauI	CACGAG	2 cut(s)	927, 964
BbsI	GAAGAC	1 cut(s)	878
Bbv12I	GWGCWC	2 cut(s)	1323, 1452
BbvI	GCAGC	4 cut(s)	270, 983, 1411, 1448
BccI	CCATC	7 cut(s)	188, 1159, 1163, 1634, 1831, 2078, 2108
BcgI	CGANNNNNNTGC	2 cut(s)	1849, 1883
BciT130I	CCWGG	6 cut(s)	290, 746, 797, 1251, 1383, 1715
BcnI	CCSGG	5 cut(s)	383, 530, 687, 696, 903
BcoDI	GTCTC	4 cut(s)	579, 580, 1534, 1675
BfaI	CTAG	3 cut(s)	33, 84, 200
BfmI	CTRYAG	5 cut(s)	403, 1313, 1403, 1524, 1611
BfoI	RGCGCY	2 cut(s)	403, 1055
BfuAI	ACCTGC	2 cut(s)	1306, 1637
BglI	GCCNNNNNGGC	1 cut(s)	944
BglII	AGATCT	1 cut(s)	1399
BisI	GCNGC	6 cut(s)	281, 284, 972, 1206, 1425, 1437
BlpI	GCTNAGC	1 cut(s)	2124
BlsI	GCNGC	6 cut(s)	282, 285, 973, 1207, 1426, 1438
Bme18I	GGWCC	6 cut(s)	517, 532, 683, 692, 729, 1505
BmeT110I	CYCGRG	2 cut(s)	1012, 1685
BmgBI	CACGTC	1 cut(s)	1445
BmiI	GGNNCC	9 cut(s)	348, 519, 685, 694, 712, 897, 907, 1009, 1588
BmsI	GCATC	5 cut(s)	1072, 1471, 1584, 1805, 1957
BoxI	GACNNNNGTC	2 cut(s)	498, 1687
BpiI	GAAGAC	1 cut(s)	878
BplI	GAGNNNNNCTC	2 cut(s)	572, 604
BpmI	CTGGAG	7 cut(s)	272, 783, 807, 827, 1309, 1508, 1736
Bpu1102I	GCTNAGC	1 cut(s)	2124
BpuEI	CTTGAG	1 cut(s)	1436
BpuMI	CCSGG	5 cut(s)	383, 530, 687, 696, 903
BsaBI	GATNNNNATC	1 cut(s)	1625
BsaJI	CCNNGG	8 cut(s)	507, 579, 714, 1275, 1636, 1738, 1944, 2010
BsaWI	WCCGGW	2 cut(s)	590, 908
BsaXI	ACNNNNNCTCC	2 cut(s)	1734, 1764
Bsc4I	CCNNNNNNNGG	6 cut(s)	465, 597, 761, 908, 1281, 1910
Bse118I	RCCGGY	1 cut(s)	938
Bse1I	ACTGG	2 cut(s)	766, 1344
Bse3DI	GCAATG	1 cut(s)	1497
Bse8I	GATNNNNATC	1 cut(s)	1625
BseAI	TCCGGA	1 cut(s)	590
BseBI	CCWGG	6 cut(s)	290, 746, 797, 1251, 1383, 1715
BseDI	CCNNGG	8 cut(s)	507, 579, 714, 1275, 1636, 1738, 1944, 2010
BseGI	GGATG	8 cut(s)	185, 1174, 1228, 1354, 1629, 1925, 1972, 2037
BseJI	GATNNNNATC	1 cut(s)	1625
BseLI	CCNNNNNNNGG	6 cut(s)	465, 597, 761, 908, 1281, 1910
BseMI	GCAATG	1 cut(s)	1497
BseMII	CTCAG	2 cut(s)	341, 2115
BseNI	ACTGG	2 cut(s)	766, 1344
BseRI	GAGGAG	2 cut(s)	54, 1550
BseSI	GKGCMC	2 cut(s)	714, 1323
BseX3I	CGGCCG	1 cut(s)	496
BseXI	GCAGC	4 cut(s)	270, 983, 1411, 1448
BseYI	CCCAGC	3 cut(s)	294, 1295, 1568
BsgI	GTGCAG	1 cut(s)	2027
Bsh1236I	CGCG	1 cut(s)	278
Bsh1285I	CGRYCG	1 cut(s)	499
BshNI	GGYRCC	3 cut(s)	346, 905, 1586
BsiEI	CGRYCG	1 cut(s)	499
BsiHKAI	GWGCWC	2 cut(s)	1323, 1452
BsiHKCI	CYCGRG	2 cut(s)	1012, 1685
BslFI	GGGAC	3 cut(s)	503, 669, 687
BslI	CCNNNNNNNGG	6 cut(s)	465, 597, 761, 908, 1281, 1910
BsmAI	GTCTC	4 cut(s)	579, 580, 1534, 1675
BsmBI	CGTCTC	1 cut(s)	580
BsmFI	GGGAC	3 cut(s)	503, 669, 687
BsoBI	CYCGRG	2 cut(s)	1012, 1685
Bsp120I	GGGCCC	1 cut(s)	710
Bsp1286I	GDGCHC	3 cut(s)	714, 1323, 1452
Bsp13I	TCCGGA	1 cut(s)	590
Bsp1407I	TGTACA	1 cut(s)	1698
Bsp143I	GATC	6 cut(s)	86, 1308, 1399, 1606, 1866, 2016
Bsp1720I	GCTNAGC	1 cut(s)	2124
Bsp19I	CCATGG	2 cut(s)	714, 1944
BspACI	CCGC	5 cut(s)	276, 281, 670, 1205, 1880
BspCNI	CTCAG	2 cut(s)	340, 2116
BspEI	TCCGGA	1 cut(s)	590
BspFNI	CGCG	1 cut(s)	278
BspHI	TCATGA	1 cut(s)	2097
BspLI	GGNNCC	9 cut(s)	348, 519, 685, 694, 712, 897, 907, 1009, 1588
BspMAI	CTGCAG	1 cut(s)	1317
BspMI	ACCTGC	2 cut(s)	1306, 1637
BspPI	GGATC	2 cut(s)	1303, 1601
BspQI	GCTCTTC	1 cut(s)	480
BspT107I	GGYRCC	3 cut(s)	346, 905, 1586
BsrDI	GCAATG	1 cut(s)	1497
BsrFI	RCCGGY	1 cut(s)	938
BsrGI	TGTACA	1 cut(s)	1698
BsrI	ACTGG	2 cut(s)	766, 1344
BssAI	RCCGGY	1 cut(s)	938
BssECI	CCNNGG	8 cut(s)	507, 579, 714, 1275, 1636, 1738, 1944, 2010
BssMI	GATC	6 cut(s)	86, 1308, 1399, 1606, 1866, 2016
BssSI	CACGAG	2 cut(s)	927, 964
BssT1I	CCWWGG	3 cut(s)	714, 1738, 1944
Bst2BI	CACGAG	2 cut(s)	927, 964
Bst2UI	CCWGG	6 cut(s)	290, 746, 797, 1251, 1383, 1715
Bst4CI	ACNGT	3 cut(s)	267, 1276, 1698
Bst6I	CTCTTC	4 cut(s)	34, 114, 480, 1671
BstAUI	TGTACA	1 cut(s)	1698
BstC8I	GCNNGC	7 cut(s)	205, 209, 276, 366, 949, 953, 1575
BstDEI	CTNAG	3 cut(s)	327, 1909, 2124
BstDSI	CCRYGG	5 cut(s)	714, 1275, 1636, 1944, 2010
BstF5I	GGATG	8 cut(s)	185, 1174, 1228, 1354, 1629, 1925, 1972, 2037
BstFNI	CGCG	1 cut(s)	278
BstH2I	RGCGCY	2 cut(s)	403, 1055
BstHHI	GCGC	5 cut(s)	280, 402, 971, 1054, 1796
BstKTI	GATC	6 cut(s)	89, 1311, 1402, 1609, 1869, 2019
BstMAI	GTCTC	4 cut(s)	579, 580, 1534, 1675
BstMBI	GATC	6 cut(s)	86, 1308, 1399, 1606, 1866, 2016
BstMCI	CGRYCG	1 cut(s)	499
BstNI	CCWGG	6 cut(s)	290, 746, 797, 1251, 1383, 1715
BstNSI	RCATGY	1 cut(s)	1577
BstPAI	GACNNNNGTC	2 cut(s)	498, 1687
BstSFI	CTRYAG	5 cut(s)	403, 1313, 1403, 1524, 1611
BstSLI	GKGCMC	2 cut(s)	714, 1323
BstUI	CGCG	1 cut(s)	278
BstV1I	GCAGC	4 cut(s)	270, 983, 1411, 1448
BstV2I	GAAGAC	1 cut(s)	878
BstX2I	RGATCY	2 cut(s)	1308, 1399
BstXI	CCANNNNNNTGG	2 cut(s)	1568, 1649
BstYI	RGATCY	2 cut(s)	1308, 1399
BstZI	CGGCCG	1 cut(s)	496
BtgI	CCRYGG	5 cut(s)	714, 1275, 1636, 1944, 2010
BtrI	CACGTC	1 cut(s)	1445
BtsCI	GGATG	8 cut(s)	185, 1174, 1228, 1354, 1629, 1925, 1972, 2037
BtsI	GCAGTG	1 cut(s)	852
BtsIMutI	CAGTG	2 cut(s)	852, 1337
BveI	ACCTGC	2 cut(s)	1306, 1637
Cac8I	GCNNGC	7 cut(s)	205, 209, 276, 366, 949, 953, 1575
CaiI	CAGNNNCTG	2 cut(s)	761, 1411
CciI	TCATGA	1 cut(s)	2097
CfoI	GCGC	5 cut(s)	280, 402, 971, 1054, 1796
Cfr10I	RCCGGY	1 cut(s)	938
Csp6I	GTAC	3 cut(s)	850, 906, 1699
CspCI	CAANNNNNGTGG	2 cut(s)	1332, 1367
CviAII	CATG	7 cut(s)	553, 715, 1562, 1574, 1810, 1945, 2098
CviQI	GTAC	3 cut(s)	850, 906, 1699
DdeI	CTNAG	3 cut(s)	327, 1909, 2124
DpnI	GATC	6 cut(s)	88, 1310, 1401, 1608, 1868, 2018
DpnII	GATC	6 cut(s)	86, 1308, 1399, 1606, 1866, 2016
DrdI	GACNNNNNNGTC	1 cut(s)	681
DseDI	GACNNNNNNGTC	1 cut(s)	681
EaeI	YGGCCR	4 cut(s)	496, 549, 1639, 2052
EagI	CGGCCG	1 cut(s)	496
Eam1104I	CTCTTC	4 cut(s)	34, 114, 480, 1671
EarI	CTCTTC	4 cut(s)	34, 114, 480, 1671
Ecl136II	GAGCTC	1 cut(s)	1450
EclXI	CGGCCG	1 cut(s)	496
Eco130I	CCWWGG	3 cut(s)	714, 1738, 1944
Eco147I	AGGCCT	2 cut(s)	1249, 1285
Eco24I	GRGCYC	2 cut(s)	714, 1452
Eco32I	GATATC	3 cut(s)	568, 1623, 1960
Eco47I	GGWCC	6 cut(s)	517, 532, 683, 692, 729, 1505
Eco52I	CGGCCG	1 cut(s)	496
Eco53kI	GAGCTC	1 cut(s)	1450
Eco57I	CTGAAG	2 cut(s)	461, 1776
Eco88I	CYCGRG	2 cut(s)	1012, 1685
EcoICRI	GAGCTC	1 cut(s)	1450
EcoO109I	RGGNCCY	3 cut(s)	683, 692, 1008
EcoRI	GAATTC	1 cut(s)	2093
EcoRII	CCWGG	6 cut(s)	288, 744, 795, 1249, 1381, 1713
EcoRV	GATATC	3 cut(s)	568, 1623, 1960
EcoT14I	CCWWGG	3 cut(s)	714, 1738, 1944
EcoT38I	GRGCYC	2 cut(s)	714, 1452
ErhI	CCWWGG	3 cut(s)	714, 1738, 1944
Esp3I	CGTCTC	1 cut(s)	580
FaeI	CATG	7 cut(s)	556, 718, 1565, 1577, 1813, 1948, 2101
FaqI	GGGAC	3 cut(s)	503, 669, 687
FatI	CATG	7 cut(s)	552, 714, 1561, 1573, 1809, 1944, 2097
FauI	CCCGC	2 cut(s)	283, 663
FblI	GTMKAC	1 cut(s)	249
Fnu4HI	GCNGC	6 cut(s)	281, 284, 972, 1206, 1425, 1437
FokI	GGATG	8 cut(s)	172, 1181, 1235, 1361, 1616, 1912, 1979, 2024
FriOI	GRGCYC	2 cut(s)	714, 1452
Fsp4HI	GCNGC	6 cut(s)	281, 284, 972, 1206, 1425, 1437
FspBI	CTAG	3 cut(s)	33, 84, 200
FspI	TGCGCA	1 cut(s)	970
GlaI	GCGC	5 cut(s)	279, 401, 970, 1053, 1795
GluI	GCNGC	6 cut(s)	281, 284, 972, 1206, 1425, 1437
GsaI	CCCAGC	3 cut(s)	298, 1299, 1572
GsuI	CTGGAG	7 cut(s)	272, 783, 807, 827, 1309, 1508, 1736
HaeII	RGCGCY	2 cut(s)	403, 1055
HhaI	GCGC	5 cut(s)	280, 402, 971, 1054, 1796
Hin1II	CATG	7 cut(s)	556, 718, 1565, 1577, 1813, 1948, 2101
Hin6I	GCGC	5 cut(s)	278, 400, 969, 1052, 1794
HinP1I	GCGC	5 cut(s)	278, 400, 969, 1052, 1794
HincII	GTYRAC	2 cut(s)	1158, 1916
HindII	GTYRAC	2 cut(s)	1158, 1916
HindIII	AAGCTT	2 cut(s)	131, 1995
HinfI	GANTC	9 cut(s)	167, 447, 587, 1232, 1494, 1683, 1688, 1720, 1854
HphI	GGTGA	4 cut(s)	217, 953, 1987, 2099
Hpy166II	GTNNAC	7 cut(s)	250, 852, 1158, 1279, 1321, 1354, 1916
Hpy8I	GTNNAC	7 cut(s)	250, 852, 1158, 1279, 1321, 1354, 1916
Hpy99I	CGWCG	2 cut(s)	504, 938
HpyCH4III	ACNGT	3 cut(s)	267, 1276, 1698
HpyCH4IV	ACGT	2 cut(s)	255, 1444
HpyF3I	CTNAG	3 cut(s)	327, 1909, 2124
HpySE526I	ACGT	2 cut(s)	255, 1444
Hsp92II	CATG	7 cut(s)	556, 718, 1565, 1577, 1813, 1948, 2101
HspAI	GCGC	5 cut(s)	278, 400, 969, 1052, 1794
Kpn2I	TCCGGA	1 cut(s)	590
KpnI	GGTACC	1 cut(s)	909
Kzo9I	GATC	6 cut(s)	86, 1308, 1399, 1606, 1866, 2016
LguI	GCTCTTC	1 cut(s)	480
LmnI	GCTCC	8 cut(s)	291, 788, 863, 988, 1394, 1489, 1672, 1981
Lsp1109I	GCAGC	4 cut(s)	270, 983, 1411, 1448
LweI	GCATC	5 cut(s)	1072, 1471, 1584, 1805, 1957
MaeI	CTAG	3 cut(s)	33, 84, 200
MaeII	ACGT	2 cut(s)	255, 1444
MaeIII	GTNAC	6 cut(s)	256, 267, 370, 766, 1270, 1783
MalI	GATC	6 cut(s)	88, 1310, 1401, 1608, 1868, 2018
MboI	GATC	6 cut(s)	86, 1308, 1399, 1606, 1866, 2016
MflI	RGATCY	2 cut(s)	1308, 1399
MhlI	GDGCHC	3 cut(s)	714, 1323, 1452
MlsI	TGGCCA	3 cut(s)	551, 1641, 2054
MluCI	AATT	7 cut(s)	51, 160, 310, 619, 1183, 1547, 2093
MluNI	TGGCCA	3 cut(s)	551, 1641, 2054
MlyI	GAGTC	5 cut(s)	161, 456, 581, 1677, 1697
MmeI	TCCRAC	3 cut(s)	92, 189, 979
Mox20I	TGGCCA	3 cut(s)	551, 1641, 2054
MroI	TCCGGA	1 cut(s)	590
MscI	TGGCCA	3 cut(s)	551, 1641, 2054
MseI	TTAA	3 cut(s)	341, 1146, 1305
Msp20I	TGGCCA	3 cut(s)	551, 1641, 2054
MspA1I	CMGCKG	3 cut(s)	283, 481, 1955
MvaI	CCWGG	6 cut(s)	290, 746, 797, 1251, 1383, 1715
MvnI	CGCG	1 cut(s)	278
NciI	CCSGG	5 cut(s)	383, 530, 687, 696, 903
NcoI	CCATGG	2 cut(s)	714, 1944
NdeII	GATC	6 cut(s)	86, 1308, 1399, 1606, 1866, 2016
NlaIII	CATG	7 cut(s)	556, 718, 1565, 1577, 1813, 1948, 2101
NlaIV	GGNNCC	9 cut(s)	348, 519, 685, 694, 712, 897, 907, 1009, 1588
NmuCI	GTSAC	3 cut(s)	256, 267, 1783
NsbI	TGCGCA	1 cut(s)	970
NspI	RCATGY	1 cut(s)	1577
PaeI	GCATGC	1 cut(s)	1577
PaeR7I	CTCGAG	2 cut(s)	1012, 1685
PagI	TCATGA	1 cut(s)	2097
PaqCI	CACCTGC	2 cut(s)	1306, 1637
PceI	AGGCCT	2 cut(s)	1249, 1285
PciSI	GCTCTTC	1 cut(s)	480
PcsI	WCGNNNNNNNCGW	1 cut(s)	1052
PfeI	GAWTC	4 cut(s)	1232, 1494, 1720, 1854
PflFI	GACNNNGTC	1 cut(s)	254
PflMI	CCANNNNNTGG	1 cut(s)	761
PfoI	TCCNGGA	3 cut(s)	381, 685, 744
PkrI	GCNGC	6 cut(s)	282, 285, 973, 1207, 1426, 1438
PleI	GAGTC	5 cut(s)	161, 455, 581, 1677, 1696
PpsI	GAGTC	5 cut(s)	161, 455, 581, 1677, 1696
PpuMI	RGGWCCY	2 cut(s)	683, 692
PshAI	GACNNNNGTC	2 cut(s)	498, 1687
PshBI	ATTAAT	1 cut(s)	1146
Psp124BI	GAGCTC	1 cut(s)	1452
Psp5II	RGGWCCY	2 cut(s)	683, 692
Psp6I	CCWGG	6 cut(s)	288, 744, 795, 1249, 1381, 1713
PspFI	CCCAGC	3 cut(s)	294, 1295, 1568
PspGI	CCWGG	6 cut(s)	288, 744, 795, 1249, 1381, 1713
PspN4I	GGNNCC	9 cut(s)	348, 519, 685, 694, 712, 897, 907, 1009, 1588
PspOMI	GGGCCC	1 cut(s)	710
PspPPI	RGGWCCY	2 cut(s)	683, 692
PspXI	VCTCGAGB	1 cut(s)	1685
PstI	CTGCAG	1 cut(s)	1317
PstNI	CAGNNNCTG	2 cut(s)	761, 1411
PsuI	RGATCY	2 cut(s)	1308, 1399
PsyI	GACNNNGTC	1 cut(s)	254
PvuII	CAGCTG	2 cut(s)	481, 1955
RsaI	GTAC	3 cut(s)	851, 907, 1700
RsaNI	GTAC	3 cut(s)	850, 906, 1699
SacI	GAGCTC	1 cut(s)	1452
SapI	GCTCTTC	1 cut(s)	480
SaqAI	TTAA	3 cut(s)	341, 1146, 1305
SatI	GCNGC	6 cut(s)	281, 284, 972, 1206, 1425, 1437
Sau3AI	GATC	6 cut(s)	86, 1308, 1399, 1606, 1866, 2016
SbfI	CCTGCAGG	1 cut(s)	1317
SchI	GAGTC	5 cut(s)	161, 456, 581, 1677, 1697
SdaI	CCTGCAGG	1 cut(s)	1317
SduI	GDGCHC	3 cut(s)	714, 1323, 1452
SfaNI	GCATC	5 cut(s)	1072, 1471, 1584, 1805, 1957
SfcI	CTRYAG	5 cut(s)	403, 1313, 1403, 1524, 1611
Sfr274I	CTCGAG	2 cut(s)	1012, 1685
SgrAI	CRCCGGYG	1 cut(s)	938
SinI	GGWCC	6 cut(s)	517, 532, 683, 692, 729, 1505
SlaI	CTCGAG	2 cut(s)	1012, 1685
SmlI	CTYRAG	3 cut(s)	1012, 1451, 1685
SmoI	CTYRAG	3 cut(s)	1012, 1451, 1685
SphI	GCATGC	1 cut(s)	1577
Sse8387I	CCTGCAGG	1 cut(s)	1317
Sse9I	AATT	7 cut(s)	51, 160, 310, 619, 1183, 1547, 2093
SseBI	AGGCCT	2 cut(s)	1249, 1285
SsiI	CCGC	5 cut(s)	276, 281, 670, 1205, 1880
SspMI	CTAG	3 cut(s)	33, 84, 200
SstI	GAGCTC	1 cut(s)	1452
StuI	AGGCCT	2 cut(s)	1249, 1285
StyI	CCWWGG	3 cut(s)	714, 1738, 1944
TaaI	ACNGT	3 cut(s)	267, 1276, 1698
TaiI	ACGT	2 cut(s)	258, 1447
TaqI	TCGA	5 cut(s)	540, 1013, 1046, 1686, 1842
TasI	AATT	7 cut(s)	51, 160, 310, 619, 1183, 1547, 2093
TatI	WGTACW	2 cut(s)	849, 1698
TauI	GCSGC	2 cut(s)	283, 1208
TfiI	GAWTC	4 cut(s)	1232, 1494, 1720, 1854
Tru1I	TTAA	3 cut(s)	341, 1146, 1305
Tru9I	TTAA	3 cut(s)	341, 1146, 1305
TscAI	CASTG	2 cut(s)	859, 1344
TseFI	GTSAC	3 cut(s)	256, 267, 1783
TseI	GCWGC	4 cut(s)	283, 971, 1424, 1436
Tsp45I	GTSAC	3 cut(s)	256, 267, 1783
TspDTI	ATGAA	7 cut(s)	165, 569, 601, 1057, 1430, 1798, 2086
TspGWI	ACGGA	3 cut(s)	562, 1175, 2027
TspRI	CASTG	2 cut(s)	859, 1344
Tth111I	GACNNNGTC	1 cut(s)	254
Van91I	CCANNNNNTGG	1 cut(s)	761
VneI	GTGCAC	1 cut(s)	1319
VpaK11BI	GGWCC	6 cut(s)	517, 532, 683, 692, 729, 1505
VspI	ATTAAT	1 cut(s)	1146
XapI	RAATTY	3 cut(s)	51, 619, 2093
XceI	RCATGY	1 cut(s)	1577
XhoI	CTCGAG	2 cut(s)	1012, 1685
XmiI	GTMKAC	1 cut(s)	249
XspI	CTAG	3 cut(s)	33, 84, 200

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.