Prupe.1G355600_v2.0.a1

ATP-dependent zinc metalloprotease FTSH

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0011868
Physical Location & Seq
Reverse (-)
32997304 .. 33001273
3970 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G355600.2

Sequence Viewer

Length: 2160 bp
ATGGCTTCAACCACCAACACCTTGCTCTCTTCTAACTTTTTTGGGACTAGAATCCTACACTCTCCTCCAACCCCAAAAACCACCTCCAGATGCACATCAGCACCAATTCCTCTGCCCTTCTTCTCCAAGAGAAACCTTTTTACCACCAAAAACATTTTCAACCAGAAACCCAATTCCGAGCCCGTCAAATCCGCAGCATCCCAAGCCACTTTAGCTGCCTTACTCTTCTCTTCAGTCACTTCACTCACCCCACAAGCCCTAGCCTTAGACGCCACACCCACCCCCACACCCCCACCTGTTCTCCAAGCCCAGCCTACCAAACCCAACGCCTCCTCTCCTTTCTCTCAGAATCTCCTCGTTACGGCCCCAAAACCCCAATCCCAGGTCGCCACTGACCTCCCTGAAGGCAGCCAATGGCGCTACAGCGAGTTCCTCAACGCAGTCAAGAAGGGCAAGGTCGAAAGAGTCAGGTTCAGCAAAGACGGTTCTGGCCTCCAACTTACTGCCGTGGATGGCCGACGAGCCTCCGTCATTGTTCCCAATGACCCGGACCTTATCGACATTTTGGCCATGAACGGCGTCGATATTTCAGTGTCCGAGGGCGATTCGGGCAATGGATTGTTCAATTTCATCGGGAACTTGTTGTTCCCAATCTTGGCCTTCGCGGGATTGTTCCTCCTTTTCCGGCGAGCGGGAGGTGGTCCCGGAGGGCCCGGTGGGCTTGGTGGGCCTATGGACTTCGGAAGGTCCAAATCCAAATTCCAAGAAGTTCCAGAGACGGGGGTGAGTTTCTCTGATGTAGCTGGAGCTGACCAAGCAAAGCTGGAACTGCAGGAGGTGGTTGATTTCTTGAAGAACCCAGATAAGTACACTGCCCTTGGAGCCAAAATCCCAAAAGGCTGTCTTTTGGTGGGTCCACCTGGTACCGGCAAGACCCTTCTGGCTCGGGCCGTGGCCGGCGAGGCTGGGGTGCCGTTTTTCTCTTGCGCAGCTTCAGAGTTCGTGGAATTGTTTGTGGGAGTGGGTGCGTCGAGAGTGCGGGACTTGTTCGAGAAGGCCAAGTCGAAAGCGCCGTGCATTGTGTTCATTGACGAGATTGATGCAGTGGGGAGGCAGAGAGGAGCAGGTATGGGAGGTGGGAATGATGAGAGGGAGCAGACCATTAATCAGCTGTTGACGGAGATGGATGGCTTTTCGGGTAATTCCGGTGTCATAGTTTTGGCGGCTACCAACCGGCCGGATGTTCTTGATTCGGCCTTGTTGAGGCCTGGTAGATTTGACCGACAGGTGACCGTGGACAGGCCTGATGTTGCTGGGAGAGTTAAGATCCTGCAGGTGCACTCTAGAGGCAAGGCACTTGCAAAGGATGTGGACTTTGAGAAGATTGCAAGGAGAACACCTGGTTTCACGGGGGCTGATCTGCAAAACCTGATGAATGAAGCTGCCATTCTTGCAGCCAGACGCGACCTCAAAGAAATAAGTAAAGATGAGATCTCTGATGCTCTGGAGCGAATAATTGCTGGACCTGAGAAGAAAAATGCTGTGGTCTCAGAAGACAAGAAGAAATTAGTCGCCTACCATGAGGCCGGGCATGCTCTTGTTGGTGCTTTAATGCCAGAATATGATCCTGTAGCTAAGATATCCATCATCCCTCGTGGCCAAGCCGGTGGTCTAACCTTCTTTGCTCCAAGTGAAGAGAGACTCGAGTCCGGACTGTACAGTAGAAGCTACCTGGAGAATCAAATGGCTGTTGCCCTTGGTGGAAGGGTTGCCGAAGAAGTTATCTTTGGTCAGGAAAATGTGACAACAGGGGCATCAAGTGACTTTATGCAAGTTTCAAGGGTGGCAAGGCAGATGGTTGAGAGATTTGGGTTCAGCAAAAAGATCGGACAAGTTGCTATCGGTGCTGGTGGTGGCAATCCCTTCTTAGGTCAACAGATGTCGTCCCAAAAAGATTACTCCATGGCAACTGCTGATATTGTGGATGCAGAGGTAAGGGAGTTGGTAGAGAAAGCTTATTCAAGGGCCACGCAGATCATCACAACCCACATCGATATCCTCCACAAACTAGCCCAGCTCCTCATGGAGAAGGAAACTGTTGATGGTGAAGAGTTCATGAGCCTCTTCATTGATGGGAAAGCTGAGCTATATGTTGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA Peptidase_M41

Protein Analysis

720

Amino Acids

76.87

Weight (kDa)

6.42

Isoelectric Point (pI)

36.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011868)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G50250 AT5G42270
fragaria_vesca FvH4_2g37610 FvH4_2g37610 FvH4_2g37610 FvH4_2g37610
malus_domestica MD08G1003700.v1.1 MD15G1003200.v1.1
prunus_persica Prupe.1G355600_v2.0.a1 Prupe.1G355600_v2.0.a1
pyrus_communis pycom15g00230
rosa_chinensis RchiOBHm_Chr6g0304121
rosa_laevigata RLG00000011013
rosa_multiflora Rmu_ssc0000218.1_g000001 Rmu_ssc0000218.1_g000004
rosa_roxburghii Rroxscaffold_7G00164050
rosa_rugosa Rorug06G0327800
rosa_samantha Rh6BG461000
rosa_wichuraiana Rw6G038290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1324
Acc16I TGCGCA 1 cut(s) 988
Acc36I ACCTGC 2 cut(s) 1115, 1324
Acc65I GGTACC 1 cut(s) 923
AccB1I GGYRCC 2 cut(s) 923, 970
AccBSI CCGCTC 1 cut(s) 692
AccII CGCG 2 cut(s) 665, 1464
AccIII TCCGGA 1 cut(s) 1709
AciI CCGC 5 cut(s) 192, 665, 692, 1039, 1223
AclWI GGATC 2 cut(s) 1321, 1619
AcoI YGGCCR 5 cut(s) 514, 567, 954, 1235, 1657
AcsI RAATTY 1 cut(s) 758
AcuI CTGAAG 3 cut(s) 216, 423, 978
AcyI GRCGYC 2 cut(s) 270, 579
AfaI GTAC 3 cut(s) 869, 925, 1718
AfiI CCNNNNNNNGG 9 cut(s) 361, 382, 655, 691, 779, 926, 1263, 1299, 1928
AgsI TTSAA 6 cut(s) 9, 160, 625, 853, 1839, 2022
AjnI CCWGG 5 cut(s) 381, 919, 1267, 1399, 1731
AjuI GAANNNNNNNTTGG 6 cut(s) 140, 172, 743, 775, 1770, 1802
Alw21I GWGCWC 1 cut(s) 1341
Alw26I GTCTC 3 cut(s) 770, 1552, 1693
Alw44I GTGCAC 1 cut(s) 1337
AlwI GGATC 2 cut(s) 1321, 1619
Ama87I CYCGRG 2 cut(s) 945, 1703
Aor13HI TCCGGA 1 cut(s) 1709
ApaI GGGCCC 1 cut(s) 714
ApaLI GTGCAC 1 cut(s) 1337
ApeKI GCWGC 6 cut(s) 194, 215, 408, 989, 1442, 1454
ApoI RAATTY 1 cut(s) 758
AseI ATTAAT 1 cut(s) 1164
Asp718I GGTACC 1 cut(s) 923
AspLEI GCGC 3 cut(s) 420, 989, 1072
AsuC2I CCSGG 4 cut(s) 548, 705, 714, 1588
AsuHPI GGTGA 4 cut(s) 238, 796, 1300, 2117
AvaI CYCGRG 2 cut(s) 945, 1703
AvaII GGWCC 5 cut(s) 550, 701, 747, 914, 1523
BaeGI GKGCMC 2 cut(s) 714, 1341
BalI TGGCCA 2 cut(s) 569, 1659
BanI GGYRCC 2 cut(s) 923, 970
BanII GRGCYC 2 cut(s) 183, 714
BauI CACGAG 1 cut(s) 1653
BbsI GAAGAC 1 cut(s) 1560
Bbv12I GWGCWC 1 cut(s) 1341
BbvI GCAGC 6 cut(s) 202, 206, 420, 1001, 1429, 1466
BccI CCATC 7 cut(s) 506, 1177, 1181, 1652, 1849, 2096, 2126
BceAI ACGGC 6 cut(s) 378, 491, 592, 935, 958, 1057
BcgI CGANNNNNNTGC 4 cut(s) 1082, 1116, 1867, 1901
BciT130I CCWGG 5 cut(s) 383, 921, 1269, 1401, 1733
BcnI CCSGG 4 cut(s) 548, 705, 714, 1588
BcoDI GTCTC 3 cut(s) 770, 1552, 1693
BfaI CTAG 4 cut(s) 48, 260, 1344, 2069
BfmI CTRYAG 4 cut(s) 421, 830, 1331, 1629
BfoI RGCGCY 2 cut(s) 421, 1073
BfuAI ACCTGC 2 cut(s) 1115, 1324
BglI GCCNNNNNGGC 2 cut(s) 718, 962
BglII AGATCT 1 cut(s) 1491
BisI GCNGC 7 cut(s) 195, 216, 409, 990, 1224, 1443, 1455
BlpI GCTNAGC 1 cut(s) 2142
BlsI GCNGC 7 cut(s) 196, 217, 410, 991, 1225, 1444, 1456
Bme1390I CCNGG 9 cut(s) 383, 548, 705, 714, 921, 1269, 1401, 1588, 1733
Bme18I GGWCC 5 cut(s) 550, 701, 747, 914, 1523
BmeT110I CYCGRG 2 cut(s) 945, 1703
BmiI GGNNCC 7 cut(s) 366, 703, 712, 883, 915, 925, 972
BmrFI CCNGG 9 cut(s) 383, 548, 705, 714, 921, 1269, 1401, 1588, 1733
BmsI GCATC 6 cut(s) 80, 206, 1090, 1489, 1823, 1975
BoxI GACNNNNGTC 1 cut(s) 1705
BpiI GAAGAC 1 cut(s) 1560
BpmI CTGGAG 4 cut(s) 70, 825, 1526, 1754
Bpu1102I GCTNAGC 1 cut(s) 2142
BpuMI CCSGG 4 cut(s) 548, 705, 714, 1588
Bsa29I ATCGAT 1 cut(s) 2052
BsaBI GATNNNNATC 2 cut(s) 94, 1643
BsaHI GRCGYC 2 cut(s) 270, 579
BsaI GGTCTC 1 cut(s) 1552
BsaJI CCNNGG 8 cut(s) 381, 507, 597, 877, 951, 1293, 1756, 1962
BsaWI WCCGGW 2 cut(s) 1205, 1709
BsaXI ACNNNNNCTCC 2 cut(s) 285, 315
Bsc4I CCNNNNNNNGG 9 cut(s) 361, 382, 655, 691, 779, 926, 1263, 1299, 1928
Bse118I RCCGGY 4 cut(s) 926, 956, 1233, 1664
Bse3DI GCAATG 1 cut(s) 619
Bse8I GATNNNNATC 2 cut(s) 94, 1643
BseAI TCCGGA 1 cut(s) 1709
BseBI CCWGG 5 cut(s) 383, 921, 1269, 1401, 1733
BseCI ATCGAT 1 cut(s) 2052
BseDI CCNNGG 8 cut(s) 381, 507, 597, 877, 951, 1293, 1756, 1962
BseGI GGATG 7 cut(s) 197, 517, 1192, 1246, 1372, 1647, 1990
BseJI GATNNNNATC 2 cut(s) 94, 1643
BseLI CCNNNNNNNGG 9 cut(s) 361, 382, 655, 691, 779, 926, 1263, 1299, 1928
BseMI GCAATG 1 cut(s) 619
BseMII CTCAG 4 cut(s) 359, 1518, 1563, 2133
BseRI GAGGAG 5 cut(s) 54, 322, 344, 1134, 2069
BseSI GKGCMC 2 cut(s) 714, 1341
BseX3I CGGCCG 1 cut(s) 1235
BseXI GCAGC 6 cut(s) 202, 206, 420, 1001, 1429, 1466
BseYI CCCAGC 4 cut(s) 309, 965, 1313, 2073
Bsh1236I CGCG 2 cut(s) 665, 1464
Bsh1285I CGRYCG 1 cut(s) 1238
BshNI GGYRCC 2 cut(s) 923, 970
BshVI ATCGAT 1 cut(s) 2052
BsiEI CGRYCG 1 cut(s) 1238
BsiHKAI GWGCWC 1 cut(s) 1341
BsiHKCI CYCGRG 2 cut(s) 945, 1703
BslFI GGGAC 4 cut(s) 58, 687, 1055, 1930
BslI CCNNNNNNNGG 9 cut(s) 361, 382, 655, 691, 779, 926, 1263, 1299, 1928
BsmAI GTCTC 3 cut(s) 770, 1552, 1693
BsmBI CGTCTC 1 cut(s) 770
BsmFI GGGAC 4 cut(s) 58, 687, 1055, 1930
Bso31I GGTCTC 1 cut(s) 1552
BsoBI CYCGRG 2 cut(s) 945, 1703
Bsp120I GGGCCC 1 cut(s) 710
Bsp1286I GDGCHC 3 cut(s) 183, 714, 1341
Bsp13I TCCGGA 1 cut(s) 1709
Bsp1407I TGTACA 1 cut(s) 1716
Bsp143I GATC 6 cut(s) 1326, 1417, 1491, 1624, 1884, 2034
Bsp1720I GCTNAGC 1 cut(s) 2142
Bsp19I CCATGG 1 cut(s) 1962
BspACI CCGC 5 cut(s) 192, 665, 692, 1039, 1223
BspCNI CTCAG 4 cut(s) 358, 1519, 1562, 2134
BspDI ATCGAT 1 cut(s) 2052
BspEI TCCGGA 1 cut(s) 1709
BspFNI CGCG 2 cut(s) 665, 1464
BspHI TCATGA 1 cut(s) 2115
BspLI GGNNCC 7 cut(s) 366, 703, 712, 883, 915, 925, 972
BspMAI CTGCAG 2 cut(s) 834, 1335
BspMI ACCTGC 2 cut(s) 1115, 1324
BspPI GGATC 2 cut(s) 1321, 1619
BspT107I GGYRCC 2 cut(s) 923, 970
BspTNI GGTCTC 1 cut(s) 1552
BsrBI CCGCTC 1 cut(s) 692
BsrDI GCAATG 1 cut(s) 619
BsrFI RCCGGY 4 cut(s) 926, 956, 1233, 1664
BsrGI TGTACA 1 cut(s) 1716
BssAI RCCGGY 4 cut(s) 926, 956, 1233, 1664
BssECI CCNNGG 8 cut(s) 381, 507, 597, 877, 951, 1293, 1756, 1962
BssMI GATC 6 cut(s) 1326, 1417, 1491, 1624, 1884, 2034
BssNI GRCGYC 2 cut(s) 270, 579
BssSI CACGAG 1 cut(s) 1653
BssT1I CCWWGG 3 cut(s) 877, 1756, 1962
Bst2BI CACGAG 1 cut(s) 1653
Bst2UI CCWGG 5 cut(s) 383, 921, 1269, 1401, 1733
Bst4CI ACNGT 5 cut(s) 485, 1294, 1716, 1721, 2098
Bst6I CTCTTC 6 cut(s) 34, 230, 235, 1689, 2103, 2129
BstACI GRCGYC 2 cut(s) 270, 579
BstAUI TGTACA 1 cut(s) 1716
BstC8I GCNNGC 3 cut(s) 690, 958, 1593
BstDEI CTNAG 7 cut(s) 265, 345, 1527, 1549, 1635, 1927, 2142
BstDSI CCRYGG 4 cut(s) 507, 951, 1293, 1962
BstEII GGTNACC 1 cut(s) 1288
BstENI CCTNNNNNAGG 1 cut(s) 1261
BstF5I GGATG 7 cut(s) 197, 517, 1192, 1246, 1372, 1647, 1990
BstFNI CGCG 2 cut(s) 665, 1464
BstH2I RGCGCY 2 cut(s) 421, 1073
BstHHI GCGC 3 cut(s) 420, 989, 1072
BstKTI GATC 6 cut(s) 1329, 1420, 1494, 1627, 1887, 2037
BstMAI GTCTC 3 cut(s) 770, 1552, 1693
BstMBI GATC 6 cut(s) 1326, 1417, 1491, 1624, 1884, 2034
BstMCI CGRYCG 1 cut(s) 1238
BstNI CCWGG 5 cut(s) 383, 921, 1269, 1401, 1733
BstNSI RCATGY 1 cut(s) 1595
BstPAI GACNNNNGTC 1 cut(s) 1705
BstPI GGTNACC 1 cut(s) 1288
BstSCI CCNGG 9 cut(s) 381, 546, 703, 712, 919, 1267, 1399, 1586, 1731
BstSFI CTRYAG 4 cut(s) 421, 830, 1331, 1629
BstSLI GKGCMC 2 cut(s) 714, 1341
BstUI CGCG 2 cut(s) 665, 1464
BstV1I GCAGC 6 cut(s) 202, 206, 420, 1001, 1429, 1466
BstV2I GAAGAC 1 cut(s) 1560
BstX2I RGATCY 2 cut(s) 1326, 1491
BstXI CCANNNNNNTGG 1 cut(s) 1667
BstYI RGATCY 2 cut(s) 1326, 1491
BstZI CGGCCG 1 cut(s) 1235
Bsu15I ATCGAT 1 cut(s) 2052
BsuTUI ATCGAT 1 cut(s) 2052
BtgI CCRYGG 4 cut(s) 507, 951, 1293, 1962
BtsCI GGATG 7 cut(s) 197, 517, 1192, 1246, 1372, 1647, 1990
BtsI GCAGTG 2 cut(s) 870, 1110
BtsIMutI CAGTG 4 cut(s) 390, 597, 870, 1110
BveI ACCTGC 2 cut(s) 1115, 1324
Cac8I GCNNGC 3 cut(s) 690, 958, 1593
CciI TCATGA 1 cut(s) 2115
CfoI GCGC 3 cut(s) 420, 989, 1072
Cfr10I RCCGGY 4 cut(s) 926, 956, 1233, 1664
ClaI ATCGAT 1 cut(s) 2052
CseI GACGC 4 cut(s) 278, 568, 1017, 1470
CsiI ACCWGGT 2 cut(s) 919, 1399
Csp6I GTAC 3 cut(s) 868, 924, 1717
CspCI CAANNNNNGTGG 2 cut(s) 1350, 1385
CviAII CATG 6 cut(s) 571, 1580, 1592, 1963, 2083, 2116
CviQI GTAC 3 cut(s) 868, 924, 1717
DdeI CTNAG 7 cut(s) 265, 345, 1527, 1549, 1635, 1927, 2142
DpnI GATC 6 cut(s) 1328, 1419, 1493, 1626, 1886, 2036
DpnII GATC 6 cut(s) 1326, 1417, 1491, 1624, 1884, 2034
EaeI YGGCCR 5 cut(s) 514, 567, 954, 1235, 1657
EagI CGGCCG 1 cut(s) 1235
Eam1104I CTCTTC 6 cut(s) 34, 230, 235, 1689, 2103, 2129
EarI CTCTTC 6 cut(s) 34, 230, 235, 1689, 2103, 2129
EclXI CGGCCG 1 cut(s) 1235
Eco130I CCWWGG 3 cut(s) 877, 1756, 1962
Eco147I AGGCCT 2 cut(s) 1267, 1303
Eco24I GRGCYC 2 cut(s) 183, 714
Eco31I GGTCTC 1 cut(s) 1552
Eco32I GATATC 2 cut(s) 1641, 2056
Eco47I GGWCC 5 cut(s) 550, 701, 747, 914, 1523
Eco52I CGGCCG 1 cut(s) 1235
Eco57I CTGAAG 3 cut(s) 216, 423, 978
Eco88I CYCGRG 2 cut(s) 945, 1703
Eco91I GGTNACC 1 cut(s) 1288
EcoNI CCTNNNNNAGG 1 cut(s) 1261
EcoO109I RGGNCCY 1 cut(s) 710
EcoO65I GGTNACC 1 cut(s) 1288
EcoRII CCWGG 5 cut(s) 381, 919, 1267, 1399, 1731
EcoRV GATATC 2 cut(s) 1641, 2056
EcoT14I CCWWGG 3 cut(s) 877, 1756, 1962
EcoT38I GRGCYC 2 cut(s) 183, 714
ErhI CCWWGG 3 cut(s) 877, 1756, 1962
Esp3I CGTCTC 1 cut(s) 770
FaeI CATG 6 cut(s) 574, 1583, 1595, 1966, 2086, 2119
FalI AAGNNNNNCTT 2 cut(s) 888, 920
FaqI GGGAC 4 cut(s) 58, 687, 1055, 1930
FatI CATG 6 cut(s) 570, 1579, 1591, 1962, 2082, 2115
FauI CCCGC 3 cut(s) 658, 685, 1032
Fnu4HI GCNGC 7 cut(s) 195, 216, 409, 990, 1224, 1443, 1455
FokI GGATG 7 cut(s) 184, 524, 1199, 1253, 1379, 1634, 1997
FriOI GRGCYC 2 cut(s) 183, 714
Fsp4HI GCNGC 7 cut(s) 195, 216, 409, 990, 1224, 1443, 1455
FspBI CTAG 4 cut(s) 48, 260, 1344, 2069
FspI TGCGCA 1 cut(s) 988
GlaI GCGC 3 cut(s) 419, 988, 1071
GluI GCNGC 7 cut(s) 195, 216, 409, 990, 1224, 1443, 1455
GsaI CCCAGC 4 cut(s) 313, 969, 1317, 2077
GsuI CTGGAG 4 cut(s) 70, 825, 1526, 1754
HaeII RGCGCY 2 cut(s) 421, 1073
HgaI GACGC 4 cut(s) 278, 568, 1017, 1470
HhaI GCGC 3 cut(s) 420, 989, 1072
Hin1I GRCGYC 2 cut(s) 270, 579
Hin1II CATG 6 cut(s) 574, 1583, 1595, 1966, 2086, 2119
Hin6I GCGC 3 cut(s) 418, 987, 1070
HinP1I GCGC 3 cut(s) 418, 987, 1070
HincII GTYRAC 2 cut(s) 1176, 1934
HindII GTYRAC 2 cut(s) 1176, 1934
HindIII AAGCTT 1 cut(s) 2013
HinfI GANTC 8 cut(s) 51, 349, 465, 605, 1250, 1701, 1706, 1738
HphI GGTGA 4 cut(s) 238, 796, 1300, 2117
Hpy166II GTNNAC 7 cut(s) 870, 917, 1176, 1297, 1339, 1372, 1934
Hpy188I TCNGA 9 cut(s) 178, 348, 598, 743, 796, 997, 1498, 1552, 1889
Hpy8I GTNNAC 7 cut(s) 870, 917, 1176, 1297, 1339, 1372, 1934
Hpy99I CGWCG 3 cut(s) 522, 584, 1033
HpyCH4III ACNGT 5 cut(s) 485, 1294, 1716, 1721, 2098
HpyF3I CTNAG 7 cut(s) 265, 345, 1527, 1549, 1635, 1927, 2142
Hsp92I GRCGYC 2 cut(s) 270, 579
Hsp92II CATG 6 cut(s) 574, 1583, 1595, 1966, 2086, 2119
HspAI GCGC 3 cut(s) 418, 987, 1070
Kpn2I TCCGGA 1 cut(s) 1709
KpnI GGTACC 1 cut(s) 927
KroI GCCGGC 1 cut(s) 956
KroNI GCCGGC 1 cut(s) 958
Kzo9I GATC 6 cut(s) 1326, 1417, 1491, 1624, 1884, 2034
LmnI GCTCC 7 cut(s) 806, 881, 1121, 1153, 1507, 1690, 2082
Lsp1109I GCAGC 6 cut(s) 202, 206, 420, 1001, 1429, 1466
LweI GCATC 6 cut(s) 80, 206, 1090, 1489, 1823, 1975
MabI ACCWGGT 2 cut(s) 919, 1399
MaeI CTAG 4 cut(s) 48, 260, 1344, 2069
MaeIII GTNAC 5 cut(s) 235, 358, 1288, 1801, 1820
MalI GATC 6 cut(s) 1328, 1419, 1493, 1626, 1886, 2036
MbiI CCGCTC 1 cut(s) 692
MboI GATC 6 cut(s) 1326, 1417, 1491, 1624, 1884, 2034
MflI RGATCY 2 cut(s) 1326, 1491
MhlI GDGCHC 3 cut(s) 183, 714, 1341
MlsI TGGCCA 2 cut(s) 569, 1659
MluCI AATT 8 cut(s) 105, 172, 625, 758, 1007, 1201, 1515, 1565
MluNI TGGCCA 2 cut(s) 569, 1659
MlyI GAGTC 3 cut(s) 474, 1695, 1715
MmeI TCCRAC 2 cut(s) 92, 520
Mox20I TGGCCA 2 cut(s) 569, 1659
MroI TCCGGA 1 cut(s) 1709
MroNI GCCGGC 1 cut(s) 956
MscI TGGCCA 2 cut(s) 569, 1659
MseI TTAA 3 cut(s) 1164, 1323, 1610
Msp20I TGGCCA 2 cut(s) 569, 1659
MspA1I CMGCKG 1 cut(s) 1171
MspR9I CCNGG 9 cut(s) 383, 548, 705, 714, 921, 1269, 1401, 1588, 1733
MvaI CCWGG 5 cut(s) 383, 921, 1269, 1401, 1733
MvnI CGCG 2 cut(s) 665, 1464
NaeI GCCGGC 1 cut(s) 958
NciI CCSGG 4 cut(s) 548, 705, 714, 1588
NcoI CCATGG 1 cut(s) 1962
NdeII GATC 6 cut(s) 1326, 1417, 1491, 1624, 1884, 2034
NgoMIV GCCGGC 1 cut(s) 956
NlaIII CATG 6 cut(s) 574, 1583, 1595, 1966, 2086, 2119
NlaIV GGNNCC 7 cut(s) 366, 703, 712, 883, 915, 925, 972
NmuCI GTSAC 4 cut(s) 235, 1288, 1801, 1820
NsbI TGCGCA 1 cut(s) 988
NspI RCATGY 1 cut(s) 1595
PaeI GCATGC 1 cut(s) 1595
PaeR7I CTCGAG 1 cut(s) 1703
PagI TCATGA 1 cut(s) 2115
PaqCI CACCTGC 1 cut(s) 1324
PceI AGGCCT 2 cut(s) 1267, 1303
PcsI WCGNNNNNNNCGW 1 cut(s) 1070
PdiI GCCGGC 1 cut(s) 958
PfeI GAWTC 5 cut(s) 51, 349, 605, 1250, 1738
PfoI TCCNGGA 1 cut(s) 703
PkrI GCNGC 7 cut(s) 196, 217, 410, 991, 1225, 1444, 1456
PleI GAGTC 3 cut(s) 473, 1695, 1714
PpsI GAGTC 3 cut(s) 473, 1695, 1714
PshAI GACNNNNGTC 1 cut(s) 1705
PshBI ATTAAT 1 cut(s) 1164
Psp6I CCWGG 5 cut(s) 381, 919, 1267, 1399, 1731
PspEI GGTNACC 1 cut(s) 1288
PspFI CCCAGC 4 cut(s) 309, 965, 1313, 2073
PspGI CCWGG 5 cut(s) 381, 919, 1267, 1399, 1731
PspN4I GGNNCC 7 cut(s) 366, 703, 712, 883, 915, 925, 972
PspOMI GGGCCC 1 cut(s) 710
PspXI VCTCGAGB 1 cut(s) 1703
PstI CTGCAG 2 cut(s) 834, 1335
PsuI RGATCY 2 cut(s) 1326, 1491
PvuII CAGCTG 1 cut(s) 1171
RsaI GTAC 3 cut(s) 869, 925, 1718
RsaNI GTAC 3 cut(s) 868, 924, 1717
SaqAI TTAA 3 cut(s) 1164, 1323, 1610
SatI GCNGC 7 cut(s) 195, 216, 409, 990, 1224, 1443, 1455
Sau3AI GATC 6 cut(s) 1326, 1417, 1491, 1624, 1884, 2034
SbfI CCTGCAGG 1 cut(s) 1335
SchI GAGTC 3 cut(s) 474, 1695, 1715
ScrFI CCNGG 9 cut(s) 383, 548, 705, 714, 921, 1269, 1401, 1588, 1733
SdaI CCTGCAGG 1 cut(s) 1335
SduI GDGCHC 3 cut(s) 183, 714, 1341
SexAI ACCWGGT 2 cut(s) 919, 1399
SfaNI GCATC 6 cut(s) 80, 206, 1090, 1489, 1823, 1975
SfcI CTRYAG 4 cut(s) 421, 830, 1331, 1629
Sfr274I CTCGAG 1 cut(s) 1703
SinI GGWCC 5 cut(s) 550, 701, 747, 914, 1523
SlaI CTCGAG 1 cut(s) 1703
SmlI CTYRAG 1 cut(s) 1703
SmoI CTYRAG 1 cut(s) 1703
SphI GCATGC 1 cut(s) 1595
Sse8387I CCTGCAGG 1 cut(s) 1335
Sse9I AATT 8 cut(s) 105, 172, 625, 758, 1007, 1201, 1515, 1565
SseBI AGGCCT 2 cut(s) 1267, 1303
SsiI CCGC 5 cut(s) 192, 665, 692, 1039, 1223
SspMI CTAG 4 cut(s) 48, 260, 1344, 2069
StuI AGGCCT 2 cut(s) 1267, 1303
StyD4I CCNGG 9 cut(s) 381, 546, 703, 712, 919, 1267, 1399, 1586, 1731
StyI CCWWGG 3 cut(s) 877, 1756, 1962
TaaI ACNGT 5 cut(s) 485, 1294, 1716, 1721, 2098
TaqI TCGA 8 cut(s) 459, 558, 582, 1031, 1050, 1064, 1704, 2052
TaqII GACCGA 1 cut(s) 1296
TasI AATT 8 cut(s) 105, 172, 625, 758, 1007, 1201, 1515, 1565
TatI WGTACW 2 cut(s) 867, 1716
TauI GCSGC 1 cut(s) 1226
TfiI GAWTC 5 cut(s) 51, 349, 605, 1250, 1738
Tru1I TTAA 3 cut(s) 1164, 1323, 1610
Tru9I TTAA 3 cut(s) 1164, 1323, 1610
TscAI CASTG 4 cut(s) 397, 597, 877, 1110
TseFI GTSAC 4 cut(s) 235, 1288, 1801, 1820
TseI GCWGC 6 cut(s) 194, 215, 408, 989, 1442, 1454
Tsp45I GTSAC 4 cut(s) 235, 1288, 1801, 1820
TspDTI ATGAA 7 cut(s) 587, 619, 1075, 1448, 1452, 2104, 2116
TspGWI ACGGA 2 cut(s) 517, 1193
TspRI CASTG 4 cut(s) 397, 597, 877, 1110
VneI GTGCAC 1 cut(s) 1337
VpaK11BI GGWCC 5 cut(s) 550, 701, 747, 914, 1523
VspI ATTAAT 1 cut(s) 1164
XagI CCTNNNNNAGG 1 cut(s) 1261
XapI RAATTY 1 cut(s) 758
XbaI TCTAGA 1 cut(s) 1343
XceI RCATGY 1 cut(s) 1595
XhoI CTCGAG 1 cut(s) 1703
XspI CTAG 4 cut(s) 48, 260, 1344, 2069
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.