Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000218.1

Orthogroup ID

OG0011868

Physical Location & Seq

Genomic Coordinates Forward (+)

9139 .. 11613

Gene Structure 2475 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000218.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1890 bp

atggcttccacaacgaaccctctactctcttctagcttctacggcactaaaatcctccactctcctccaacccccaaaaccaccagatcatcagcaccacttcttcctcttccgttcttctccaaacggaagcttgtaattgccaaaaatgaagaacccaattccgactccttcaaatccatcacatcccaagccactcttgctggcttgctctttacttcactcaccacccaacaagccctcgccgtagacaacgtcacaccaccgtcacagcccgccccgctgctccaggcccagcccaccaagcccaattcctctcccttctctcagaacctcaacctaacagcaccaaagccacaacagcagtccgctactgacctcccggaaggtagccaatggcgttacagcgagttcttgaacgccgtgaagaaggggaaggtggagagagtcaggttcgccaaagaaggctctgctctccagctgacggcgattgacggccgtcgcgcctcggtggtggtcccgaacgacccggacctcatcgacattctggccatgaacggcgttgatatctccgtgtccgagggagactccggaggtgggatattcaacttcattgggaatttgctgtttccgataatcgccttcgccggattgttcttccttttcaggcggggacagggaggtccgggaggacccggtggcctcggtgggcccatggacttcggaaggtccaagtccaagttccaggaggttccagaaactggagttactttctctgatgttgctggagctgaccaggccaagctggagttgcaggaggttgttgatttcttgaagaacccggataagtacactgctcttggagctaaaatcccaaaggggtgtcttctggtggggccacccggtaccggaaagacccttctggctcgtgccgtcgccggcgaggctggcacgccgttcttctcgtgcgcagcttcggagttcgtggagctgtttgttggagttggggcctcgagagtgagggatttgtttgagaaggcaaagtcgaaagcgccgtgcattgtgttcattgatgagattgatgcagttgggaggcagagaggggcaggaatgggaggtggaaatgacgagagagaacagactattaatcagttgttgacggagatggatggtttttctggtaattctggtgtgattgtgttggcggcgactaacaggccggatgttcttgattcagctctgttgaggcccggaaggtttgacagacaagtaaccgtggacaggcctgatgttgctgggagagttaagatcctgcaggtgcactccagagggaaggcactggcaaaggatgtggactttgaaaagattgcaaggagaacgcctggtttcacaggagcagatctacagaacctgatgaacgaagctgccattcttgcagccagacgtgagctcaaggaaataagcaaagatgagatagctgatgctctggagcgaatcattgccggaccagagaagaaaaatgctgtagtctcggaggagaagaagaaattagttgcttaccatgaggctgggcatgctcttgttggtgccttgatgccggaatatgatcctgtagccaagatatccatcatcccccgtggccaagcaggtggtctaaccttctttgctccaagtgaagagagactcgagtctggactgtacagcagaagctacctggagaatcaaatggctgttgcccttggaggaagggtggctgaagaagtcatctttggtcaggcgaatgtgacaacaggagcatcaaatgacttcatgcaagtttcaagggtggcaaggcagatggtcgagagatttggattcatgttggagaaaccatggtcccgacgtctatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006091 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009056 GO:0009057 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009628 GO:0009642 GO:0009644 GO:0009719 GO:0009725 GO:0009735 GO:0009765 GO:0009892 GO:0009941 GO:0009987 GO:0010033 GO:0010109 GO:0010205 GO:0010206 GO:0010304 GO:0015979 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0019538 GO:0019684 GO:0022607 GO:0030091 GO:0030163 GO:0031323 GO:0031324 GO:0031967 GO:0031975 GO:0031976 GO:0031977 GO:0031984 GO:0034357 GO:0034622 GO:0042221 GO:0042548 GO:0042623 GO:0042651 GO:0043155 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043467 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0048519 GO:0048523 GO:0048564 GO:0050789 GO:0050794 GO:0050896 GO:0055035 GO:0065003 GO:0065007 GO:0070011 GO:0071704 GO:0071840 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1905156

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA Peptidase_M41

Protein Analysis

629

Amino Acids

67.45

Weight (kDa)

8.69

Isoelectric Point (pI)

38.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011868)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50250 AT5G42270
fragaria_vesca	FvH4_2g37610 FvH4_2g37610 FvH4_2g37610 FvH4_2g37610
malus_domestica	MD08G1003700.v1.1 MD15G1003200.v1.1
prunus_persica	Prupe.1G355600_v2.0.a1 Prupe.1G355600_v2.0.a1
pyrus_communis	pycom15g00230
rosa_chinensis	RchiOBHm_Chr6g0304121
rosa_laevigata	RLG00000011013
rosa_multiflora	Rmu_ssc0000218.1_g000001 Rmu_ssc0000218.1_g000004
rosa_roxburghii	Rroxscaffold_7G00164050
rosa_rugosa	Rorug06G0327800
rosa_samantha	Rh6BG461000
rosa_wichuraiana	Rw6G038290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1306, 1637
AasI	GACNNNNNNGTC	1 cut(s)	681
AatII	GACGTC	1 cut(s)	1885
Acc16I	TGCGCA	1 cut(s)	970
Acc36I	ACCTGC	2 cut(s)	1306, 1637
Acc65I	GGTACC	1 cut(s)	905
AccB1I	GGYRCC	2 cut(s)	905, 1586
AccB7I	CCANNNNNTGG	1 cut(s)	761
AccI	GTMKAC	1 cut(s)	249
AccII	CGCG	1 cut(s)	504
AccIII	TCCGGA	1 cut(s)	590
AciI	CCGC	5 cut(s)	276, 281, 369, 670, 1205
AclWI	GGATC	2 cut(s)	1303, 1601
AcoI	YGGCCR	3 cut(s)	496, 549, 1639
AcsI	RAATTY	1 cut(s)	619
AcuI	CTGAAG	1 cut(s)	1776
AcyI	GRCGYC	1 cut(s)	1882
AfaI	GTAC	3 cut(s)	851, 907, 1700
AfiI	CCNNNNNNNGG	5 cut(s)	484, 597, 761, 908, 1281
AgsI	TTSAA	6 cut(s)	175, 418, 607, 835, 1361, 1821
AjiI	CACGTC	1 cut(s)	1445
AjnI	CCWGG	5 cut(s)	288, 744, 795, 1381, 1713
AjuI	GAANNNNNNNTTGG	4 cut(s)	725, 757, 1752, 1784
Alw21I	GWGCWC	2 cut(s)	1323, 1452
Alw26I	GTCTC	3 cut(s)	579, 1534, 1675
Alw44I	GTGCAC	1 cut(s)	1319
AlwI	GGATC	2 cut(s)	1303, 1601
AlwNI	CAGNNNCTG	2 cut(s)	761, 1411
Ama87I	CYCGRG	2 cut(s)	1012, 1685
Aor13HI	TCCGGA	1 cut(s)	590
ApaI	GGGCCC	1 cut(s)	714
ApaLI	GTGCAC	1 cut(s)	1319
ApeKI	GCWGC	4 cut(s)	283, 971, 1424, 1436
ApoI	RAATTY	1 cut(s)	619
AseI	ATTAAT	1 cut(s)	1146
Asp718I	GGTACC	1 cut(s)	905
AspLEI	GCGC	3 cut(s)	506, 971, 1054
AsuC2I	CCSGG	7 cut(s)	383, 530, 687, 696, 842, 903, 1251
AsuHPI	GGTGA	1 cut(s)	217
AvaI	CYCGRG	2 cut(s)	1012, 1685
AvaII	GGWCC	7 cut(s)	517, 532, 683, 692, 729, 1505, 1875
BaeGI	GKGCMC	2 cut(s)	714, 1323
BalI	TGGCCA	2 cut(s)	551, 1641
BanI	GGYRCC	2 cut(s)	905, 1586
BanII	GRGCYC	2 cut(s)	714, 1452
BauI	CACGAG	2 cut(s)	927, 964
BbsI	GAAGAC	1 cut(s)	878
Bbv12I	GWGCWC	2 cut(s)	1323, 1452
BbvI	GCAGC	4 cut(s)	270, 983, 1411, 1448
BccI	CCATC	5 cut(s)	188, 1159, 1163, 1634, 1831
BciT130I	CCWGG	5 cut(s)	290, 746, 797, 1383, 1715
BcnI	CCSGG	7 cut(s)	383, 530, 687, 696, 842, 903, 1251
BcoDI	GTCTC	3 cut(s)	579, 1534, 1675
BfaI	CTAG	1 cut(s)	33
BfmI	CTRYAG	4 cut(s)	1313, 1403, 1524, 1611
BfoI	RGCGCY	1 cut(s)	1055
BfuAI	ACCTGC	2 cut(s)	1306, 1637
BglI	GCCNNNNNGGC	1 cut(s)	944
BglII	AGATCT	1 cut(s)	1399
BisI	GCNGC	5 cut(s)	284, 972, 1206, 1425, 1437
BlsI	GCNGC	5 cut(s)	285, 973, 1207, 1426, 1438
Bme18I	GGWCC	7 cut(s)	517, 532, 683, 692, 729, 1505, 1875
BmeT110I	CYCGRG	2 cut(s)	1012, 1685
BmgBI	CACGTC	1 cut(s)	1445
BmiI	GGNNCC	9 cut(s)	519, 694, 712, 753, 897, 907, 1009, 1588, 1877
BmsI	GCATC	4 cut(s)	1072, 1471, 1584, 1805
BoxI	GACNNNNGTC	2 cut(s)	498, 1687
BpiI	GAAGAC	1 cut(s)	878
BplI	GAGNNNNNCTC	2 cut(s)	572, 604
BpmI	CTGGAG	8 cut(s)	272, 461, 783, 807, 827, 1309, 1508, 1736
BpuEI	CTTGAG	1 cut(s)	1436
BpuMI	CCSGG	7 cut(s)	383, 530, 687, 696, 842, 903, 1251
BsaBI	GATNNNNATC	1 cut(s)	1625
BsaHI	GRCGYC	1 cut(s)	1882
BsaJI	CCNNGG	8 cut(s)	507, 579, 703, 714, 1275, 1636, 1738, 1871
BsaWI	WCCGGW	2 cut(s)	590, 908
BsaXI	ACNNNNNCTCC	2 cut(s)	1734, 1764
Bsc4I	CCNNNNNNNGG	5 cut(s)	484, 597, 761, 908, 1281
Bse118I	RCCGGY	1 cut(s)	938
Bse1I	ACTGG	2 cut(s)	766, 1344
Bse3DI	GCAATG	1 cut(s)	1497
Bse8I	GATNNNNATC	1 cut(s)	1625
BseAI	TCCGGA	1 cut(s)	590
BseBI	CCWGG	5 cut(s)	290, 746, 797, 1383, 1715
BseDI	CCNNGG	8 cut(s)	507, 579, 703, 714, 1275, 1636, 1738, 1871
BseGI	GGATG	5 cut(s)	185, 1174, 1228, 1354, 1629
BseJI	GATNNNNATC	1 cut(s)	1625
BseLI	CCNNNNNNNGG	5 cut(s)	484, 597, 761, 908, 1281
BseMI	GCAATG	1 cut(s)	1497
BseMII	CTCAG	1 cut(s)	341
BseNI	ACTGG	2 cut(s)	766, 1344
BseRI	GAGGAG	2 cut(s)	54, 1550
BseSI	GKGCMC	2 cut(s)	714, 1323
BseX3I	CGGCCG	1 cut(s)	496
BseXI	GCAGC	4 cut(s)	270, 983, 1411, 1448
BseYI	CCCAGC	3 cut(s)	294, 1295, 1568
Bsh1236I	CGCG	1 cut(s)	504
Bsh1285I	CGRYCG	1 cut(s)	499
BshNI	GGYRCC	2 cut(s)	905, 1586
BsiEI	CGRYCG	1 cut(s)	499
BsiHKAI	GWGCWC	2 cut(s)	1323, 1452
BsiHKCI	CYCGRG	2 cut(s)	1012, 1685
BslFI	GGGAC	3 cut(s)	503, 687, 1861
BslI	CCNNNNNNNGG	5 cut(s)	484, 597, 761, 908, 1281
BsmAI	GTCTC	3 cut(s)	579, 1534, 1675
BsmFI	GGGAC	3 cut(s)	503, 687, 1861
BsoBI	CYCGRG	2 cut(s)	1012, 1685
Bsp120I	GGGCCC	1 cut(s)	710
Bsp1286I	GDGCHC	3 cut(s)	714, 1323, 1452
Bsp13I	TCCGGA	1 cut(s)	590
Bsp1407I	TGTACA	1 cut(s)	1698
Bsp143I	GATC	4 cut(s)	86, 1308, 1399, 1606
Bsp19I	CCATGG	2 cut(s)	714, 1871
BspACI	CCGC	5 cut(s)	276, 281, 369, 670, 1205
BspCNI	CTCAG	1 cut(s)	340
BspEI	TCCGGA	1 cut(s)	590
BspFNI	CGCG	1 cut(s)	504
BspLI	GGNNCC	9 cut(s)	519, 694, 712, 753, 897, 907, 1009, 1588, 1877
BspMAI	CTGCAG	1 cut(s)	1317
BspMI	ACCTGC	2 cut(s)	1306, 1637
BspPI	GGATC	2 cut(s)	1303, 1601
BspT107I	GGYRCC	2 cut(s)	905, 1586
BsrDI	GCAATG	1 cut(s)	1497
BsrFI	RCCGGY	1 cut(s)	938
BsrGI	TGTACA	1 cut(s)	1698
BsrI	ACTGG	2 cut(s)	766, 1344
BssAI	RCCGGY	1 cut(s)	938
BssECI	CCNNGG	8 cut(s)	507, 579, 703, 714, 1275, 1636, 1738, 1871
BssMI	GATC	4 cut(s)	86, 1308, 1399, 1606
BssNI	GRCGYC	1 cut(s)	1882
BssSI	CACGAG	2 cut(s)	927, 964
BssT1I	CCWWGG	3 cut(s)	714, 1738, 1871
Bst2BI	CACGAG	2 cut(s)	927, 964
Bst2UI	CCWGG	5 cut(s)	290, 746, 797, 1383, 1715
Bst4CI	ACNGT	3 cut(s)	267, 1276, 1698
Bst6I	CTCTTC	3 cut(s)	34, 114, 1671
BstACI	GRCGYC	1 cut(s)	1882
BstAUI	TGTACA	1 cut(s)	1698
BstC8I	GCNNGC	7 cut(s)	205, 209, 276, 940, 949, 953, 1575
BstDEI	CTNAG	1 cut(s)	327
BstDSI	CCRYGG	4 cut(s)	714, 1275, 1636, 1871
BstF5I	GGATG	5 cut(s)	185, 1174, 1228, 1354, 1629
BstFNI	CGCG	1 cut(s)	504
BstH2I	RGCGCY	1 cut(s)	1055
BstHHI	GCGC	3 cut(s)	506, 971, 1054
BstKTI	GATC	4 cut(s)	89, 1311, 1402, 1609
BstMAI	GTCTC	3 cut(s)	579, 1534, 1675
BstMBI	GATC	4 cut(s)	86, 1308, 1399, 1606
BstMCI	CGRYCG	1 cut(s)	499
BstNI	CCWGG	5 cut(s)	290, 746, 797, 1383, 1715
BstNSI	RCATGY	1 cut(s)	1577
BstPAI	GACNNNNGTC	2 cut(s)	498, 1687
BstSFI	CTRYAG	4 cut(s)	1313, 1403, 1524, 1611
BstSLI	GKGCMC	2 cut(s)	714, 1323
BstUI	CGCG	1 cut(s)	504
BstV1I	GCAGC	4 cut(s)	270, 983, 1411, 1448
BstV2I	GAAGAC	1 cut(s)	878
BstX2I	RGATCY	2 cut(s)	1308, 1399
BstXI	CCANNNNNNTGG	2 cut(s)	1568, 1649
BstYI	RGATCY	2 cut(s)	1308, 1399
BstZI	CGGCCG	1 cut(s)	496
BtgI	CCRYGG	4 cut(s)	714, 1275, 1636, 1871
BtrI	CACGTC	1 cut(s)	1445
BtsCI	GGATG	5 cut(s)	185, 1174, 1228, 1354, 1629
BtsI	GCAGTG	1 cut(s)	852
BtsIMutI	CAGTG	2 cut(s)	852, 1337
BveI	ACCTGC	2 cut(s)	1306, 1637
Cac8I	GCNNGC	7 cut(s)	205, 209, 276, 940, 949, 953, 1575
CaiI	CAGNNNCTG	2 cut(s)	761, 1411
CfoI	GCGC	3 cut(s)	506, 971, 1054
Cfr10I	RCCGGY	1 cut(s)	938
Csp6I	GTAC	3 cut(s)	850, 906, 1699
CspCI	CAANNNNNGTGG	2 cut(s)	1332, 1367
CviAII	CATG	7 cut(s)	553, 715, 1562, 1574, 1810, 1858, 1872
CviQI	GTAC	3 cut(s)	850, 906, 1699
DdeI	CTNAG	1 cut(s)	327
DpnI	GATC	4 cut(s)	88, 1310, 1401, 1608
DpnII	GATC	4 cut(s)	86, 1308, 1399, 1606
DrdI	GACNNNNNNGTC	1 cut(s)	681
DseDI	GACNNNNNNGTC	1 cut(s)	681
EaeI	YGGCCR	3 cut(s)	496, 549, 1639
EagI	CGGCCG	1 cut(s)	496
Eam1104I	CTCTTC	3 cut(s)	34, 114, 1671
EarI	CTCTTC	3 cut(s)	34, 114, 1671
Ecl136II	GAGCTC	1 cut(s)	1450
EclXI	CGGCCG	1 cut(s)	496
Eco130I	CCWWGG	3 cut(s)	714, 1738, 1871
Eco147I	AGGCCT	1 cut(s)	1285
Eco24I	GRGCYC	2 cut(s)	714, 1452
Eco32I	GATATC	2 cut(s)	568, 1623
Eco47I	GGWCC	7 cut(s)	517, 532, 683, 692, 729, 1505, 1875
Eco52I	CGGCCG	1 cut(s)	496
Eco53kI	GAGCTC	1 cut(s)	1450
Eco57I	CTGAAG	1 cut(s)	1776
Eco88I	CYCGRG	2 cut(s)	1012, 1685
EcoICRI	GAGCTC	1 cut(s)	1450
EcoO109I	RGGNCCY	2 cut(s)	692, 1008
EcoRII	CCWGG	5 cut(s)	288, 744, 795, 1381, 1713
EcoRV	GATATC	2 cut(s)	568, 1623
EcoT14I	CCWWGG	3 cut(s)	714, 1738, 1871
EcoT38I	GRGCYC	2 cut(s)	714, 1452
ErhI	CCWWGG	3 cut(s)	714, 1738, 1871
FaeI	CATG	7 cut(s)	556, 718, 1565, 1577, 1813, 1861, 1875
FaiI	YATR	9 cut(s)	554, 716, 1563, 1575, 1605, 1811, 1859, 1873, 1888
FalI	AAGNNNNNCTT	2 cut(s)	183, 215
FaqI	GGGAC	3 cut(s)	503, 687, 1861
FatI	CATG	7 cut(s)	552, 714, 1561, 1573, 1809, 1857, 1871
FauI	CCCGC	3 cut(s)	283, 288, 663
FblI	GTMKAC	1 cut(s)	249
Fnu4HI	GCNGC	5 cut(s)	284, 972, 1206, 1425, 1437
FokI	GGATG	5 cut(s)	172, 1181, 1235, 1361, 1616
FriOI	GRGCYC	2 cut(s)	714, 1452
Fsp4HI	GCNGC	5 cut(s)	284, 972, 1206, 1425, 1437
FspBI	CTAG	1 cut(s)	33
FspI	TGCGCA	1 cut(s)	970
GlaI	GCGC	3 cut(s)	505, 970, 1053
GluI	GCNGC	5 cut(s)	284, 972, 1206, 1425, 1437
GsaI	CCCAGC	3 cut(s)	298, 1299, 1572
GsuI	CTGGAG	8 cut(s)	272, 461, 783, 807, 827, 1309, 1508, 1736
HaeII	RGCGCY	1 cut(s)	1055
HhaI	GCGC	3 cut(s)	506, 971, 1054
Hin1I	GRCGYC	1 cut(s)	1882
Hin1II	CATG	7 cut(s)	556, 718, 1565, 1577, 1813, 1861, 1875
Hin6I	GCGC	3 cut(s)	504, 969, 1052
HinP1I	GCGC	3 cut(s)	504, 969, 1052
HincII	GTYRAC	1 cut(s)	1158
HindII	GTYRAC	1 cut(s)	1158
HindIII	AAGCTT	1 cut(s)	131
HinfI	GANTC	9 cut(s)	167, 447, 587, 1232, 1494, 1683, 1688, 1720, 1854
HphI	GGTGA	1 cut(s)	217
Hpy166II	GTNNAC	6 cut(s)	250, 852, 1158, 1279, 1321, 1354
Hpy188I	TCNGA	8 cut(s)	166, 330, 580, 633, 725, 778, 979, 1534
Hpy8I	GTNNAC	6 cut(s)	250, 852, 1158, 1279, 1321, 1354
Hpy99I	CGWCG	3 cut(s)	504, 938, 1884
HpyCH4III	ACNGT	3 cut(s)	267, 1276, 1698
HpyCH4IV	ACGT	3 cut(s)	255, 1444, 1882
HpyCH4V	TGCA	8 cut(s)	814, 1059, 1085, 1315, 1321, 1370, 1436, 1813
HpyF3I	CTNAG	1 cut(s)	327
HpySE526I	ACGT	3 cut(s)	255, 1444, 1882
Hsp92I	GRCGYC	1 cut(s)	1882
Hsp92II	CATG	7 cut(s)	556, 718, 1565, 1577, 1813, 1861, 1875
HspAI	GCGC	3 cut(s)	504, 969, 1052
Kpn2I	TCCGGA	1 cut(s)	590
KpnI	GGTACC	1 cut(s)	909
KroI	GCCGGC	1 cut(s)	938
KroNI	GCCGGC	1 cut(s)	940
Kzo9I	GATC	4 cut(s)	86, 1308, 1399, 1606
LmnI	GCTCC	8 cut(s)	291, 788, 863, 988, 1394, 1489, 1672, 1793
Lsp1109I	GCAGC	4 cut(s)	270, 983, 1411, 1448
LweI	GCATC	4 cut(s)	1072, 1471, 1584, 1805
MaeI	CTAG	1 cut(s)	33
MaeII	ACGT	3 cut(s)	255, 1444, 1882
MaeIII	GTNAC	6 cut(s)	256, 267, 401, 766, 1270, 1783
MalI	GATC	4 cut(s)	88, 1310, 1401, 1608
MboI	GATC	4 cut(s)	86, 1308, 1399, 1606
MflI	RGATCY	2 cut(s)	1308, 1399
MhlI	GDGCHC	3 cut(s)	714, 1323, 1452
MlsI	TGGCCA	2 cut(s)	551, 1641
MluCI	AATT	6 cut(s)	138, 160, 310, 619, 1183, 1547
MluNI	TGGCCA	2 cut(s)	551, 1641
MlyI	GAGTC	5 cut(s)	161, 456, 581, 1677, 1697
MmeI	TCCRAC	4 cut(s)	92, 189, 979, 1842
Mox20I	TGGCCA	2 cut(s)	551, 1641
MreI	CGCCGGCG	1 cut(s)	938
MroI	TCCGGA	1 cut(s)	590
MroNI	GCCGGC	1 cut(s)	938
MscI	TGGCCA	2 cut(s)	551, 1641
MseI	TTAA	2 cut(s)	1146, 1305
Msp20I	TGGCCA	2 cut(s)	551, 1641
MspA1I	CMGCKG	2 cut(s)	283, 481
MvaI	CCWGG	5 cut(s)	290, 746, 797, 1383, 1715
MvnI	CGCG	1 cut(s)	504
NaeI	GCCGGC	1 cut(s)	940
NciI	CCSGG	7 cut(s)	383, 530, 687, 696, 842, 903, 1251
NcoI	CCATGG	2 cut(s)	714, 1871
NdeII	GATC	4 cut(s)	86, 1308, 1399, 1606
NgoMIV	GCCGGC	1 cut(s)	938
NlaIII	CATG	7 cut(s)	556, 718, 1565, 1577, 1813, 1861, 1875
NlaIV	GGNNCC	9 cut(s)	519, 694, 712, 753, 897, 907, 1009, 1588, 1877
NmuCI	GTSAC	3 cut(s)	256, 267, 1783
NsbI	TGCGCA	1 cut(s)	970
NspI	RCATGY	1 cut(s)	1577
PaeI	GCATGC	1 cut(s)	1577
PaeR7I	CTCGAG	2 cut(s)	1012, 1685
PaqCI	CACCTGC	2 cut(s)	1306, 1637
PceI	AGGCCT	1 cut(s)	1285
PcsI	WCGNNNNNNNCGW	1 cut(s)	1052
PdiI	GCCGGC	1 cut(s)	940
PfeI	GAWTC	4 cut(s)	1232, 1494, 1720, 1854
PflFI	GACNNNGTC	1 cut(s)	254
PflMI	CCANNNNNTGG	1 cut(s)	761
PfoI	TCCNGGA	3 cut(s)	381, 685, 744
PkrI	GCNGC	5 cut(s)	285, 973, 1207, 1426, 1438
PleI	GAGTC	5 cut(s)	161, 455, 581, 1677, 1696
PpsI	GAGTC	5 cut(s)	161, 455, 581, 1677, 1696
PpuMI	RGGWCCY	1 cut(s)	692
PshAI	GACNNNNGTC	2 cut(s)	498, 1687
PshBI	ATTAAT	1 cut(s)	1146
Psp124BI	GAGCTC	1 cut(s)	1452
Psp5II	RGGWCCY	1 cut(s)	692
Psp6I	CCWGG	5 cut(s)	288, 744, 795, 1381, 1713
PspFI	CCCAGC	3 cut(s)	294, 1295, 1568
PspGI	CCWGG	5 cut(s)	288, 744, 795, 1381, 1713
PspN4I	GGNNCC	9 cut(s)	519, 694, 712, 753, 897, 907, 1009, 1588, 1877
PspOMI	GGGCCC	1 cut(s)	710
PspPPI	RGGWCCY	1 cut(s)	692
PspXI	VCTCGAGB	1 cut(s)	1685
PstI	CTGCAG	1 cut(s)	1317
PstNI	CAGNNNCTG	2 cut(s)	761, 1411
PsuI	RGATCY	2 cut(s)	1308, 1399
PsyI	GACNNNGTC	1 cut(s)	254
PvuII	CAGCTG	1 cut(s)	481
RsaI	GTAC	3 cut(s)	851, 907, 1700
RsaNI	GTAC	3 cut(s)	850, 906, 1699
SacI	GAGCTC	1 cut(s)	1452
SaqAI	TTAA	2 cut(s)	1146, 1305
SatI	GCNGC	5 cut(s)	284, 972, 1206, 1425, 1437
Sau3AI	GATC	4 cut(s)	86, 1308, 1399, 1606
SbfI	CCTGCAGG	1 cut(s)	1317
SchI	GAGTC	5 cut(s)	161, 456, 581, 1677, 1697
SdaI	CCTGCAGG	1 cut(s)	1317
SduI	GDGCHC	3 cut(s)	714, 1323, 1452
SfaNI	GCATC	4 cut(s)	1072, 1471, 1584, 1805
SfcI	CTRYAG	4 cut(s)	1313, 1403, 1524, 1611
Sfr274I	CTCGAG	2 cut(s)	1012, 1685
SgrAI	CRCCGGYG	1 cut(s)	938
SinI	GGWCC	7 cut(s)	517, 532, 683, 692, 729, 1505, 1875
SlaI	CTCGAG	2 cut(s)	1012, 1685
SmlI	CTYRAG	3 cut(s)	1012, 1451, 1685
SmoI	CTYRAG	3 cut(s)	1012, 1451, 1685
SphI	GCATGC	1 cut(s)	1577
Sse8387I	CCTGCAGG	1 cut(s)	1317
Sse9I	AATT	6 cut(s)	138, 160, 310, 619, 1183, 1547
SseBI	AGGCCT	1 cut(s)	1285
SsiI	CCGC	5 cut(s)	276, 281, 369, 670, 1205
SspMI	CTAG	1 cut(s)	33
SstI	GAGCTC	1 cut(s)	1452
StuI	AGGCCT	1 cut(s)	1285
StyI	CCWWGG	3 cut(s)	714, 1738, 1871
TaaI	ACNGT	3 cut(s)	267, 1276, 1698
TaiI	ACGT	3 cut(s)	258, 1447, 1885
TaqI	TCGA	5 cut(s)	540, 1013, 1046, 1686, 1842
TasI	AATT	6 cut(s)	138, 160, 310, 619, 1183, 1547
TatI	WGTACW	2 cut(s)	849, 1698
TauI	GCSGC	1 cut(s)	1208
TfiI	GAWTC	4 cut(s)	1232, 1494, 1720, 1854
Tru1I	TTAA	2 cut(s)	1146, 1305
Tru9I	TTAA	2 cut(s)	1146, 1305
TscAI	CASTG	2 cut(s)	859, 1344
TseFI	GTSAC	3 cut(s)	256, 267, 1783
TseI	GCWGC	4 cut(s)	283, 971, 1424, 1436
Tsp45I	GTSAC	3 cut(s)	256, 267, 1783
TspDTI	ATGAA	7 cut(s)	165, 569, 601, 1057, 1430, 1798, 1846
TspGWI	ACGGA	4 cut(s)	102, 142, 562, 1175
TspRI	CASTG	2 cut(s)	859, 1344
Tth111I	GACNNNGTC	1 cut(s)	254
Van91I	CCANNNNNTGG	1 cut(s)	761
VneI	GTGCAC	1 cut(s)	1319
VpaK11BI	GGWCC	7 cut(s)	517, 532, 683, 692, 729, 1505, 1875
VspI	ATTAAT	1 cut(s)	1146
XapI	RAATTY	1 cut(s)	619
XceI	RCATGY	1 cut(s)	1577
XhoI	CTCGAG	2 cut(s)	1012, 1685
XmiI	GTMKAC	1 cut(s)	249
XspI	CTAG	1 cut(s)	33
ZraI	GACGTC	1 cut(s)	1883

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.