Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0011868

Physical Location & Seq

Genomic Coordinates Forward (+)

48101375 .. 48106754

Gene Structure 5380 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0327800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2136 bp

ATGGACCGCCGCTCCGTCACCACCAGACGCCGCAGTCTGAAGCGGAAGCTGGAACAAGACTTCGTAGAAGAAACCCAAGAAAACGAGCCGGATCGTAAATCTCCGGCCGTCGATCCCCAAGATCCGCTTCTTGAGATTCGCGCCCACGTCAAGGTTCTCGACTCCACCTTCTCCGCCTCCGACGCCGACCGCGCCGCCGCCAAGGTCGCCGCCCGAGCCCTGGTCGAACTCGCCAAGAACGAGGACAATCTGAAAGACTTAGTGGAATGCGGAGCGGTTCCGGCTCTGGTTAAGCATCTACGGACGCCGCCGCCGGAGAGAGGCGGAAGCCACAGTCCGATTCCGTGTGAGCACGAGGTCGAGAAAGAAAGTGCTTTCGCGCTTAATCTCATCGCCGTTAAGCCGGAGAATCAACATCTCATAGTTGATGCTGGAGGTTTGTCGCCTCTTATTGATCTGTTAAAGAGGCACAAGAGTAGTAGTGGCTTAAATGCGGGGGCGGTTGATGGTGTTATCAGGAGAGCTGCGGATGCAATCTGTAACATTTCTCATGAGAATAGCAACATTAAAAACCTTGTCAGGATTGAAGGTGGTATCCCTCCTCTTGTGGAGTTGCTTAACTTCTTTGACACAAAGGTACAGAGGGCAGCTGCAGGGGCCCTGAAGATCCTAGCATTCAAAAATGACGAAAACAAAAATCAGATTGTTGAGTGCAACGCTTTGCCTAACCTGGTACTTATGCTGCGATCTGAGATTGCAACTATGACTTATGAAGCAGTTGGTGTAATTGGTAATCTTGTCCACTCTTCCCCAAGCATCAAGAAACTTGTTCTTGTTGCTGGTGCTTTACAACCTGTTATTGATTTACTGAGTTCACCTTGTTTGGAAAGCCAAAGAGAAGCTGCTCTATTACTTGGTCAGTTTGCTACGGCTGATTCAGATTGCAAGGCACACATTGTTCAAAGGGGAGCGGTACAACCATTAATTAAGATGCTCCAGTCACCTGATTCACAGGTCAAGGAGATGTCGGCTTTTGCAATTGGGAGGTTGGCACAGGACACACATAACCAAGCTGGCATTGCTCATAATGGTGGCATAGTGCCTCTACTCAAGTTACTTGATTCGAAAAATGAATCTCTGCAACACAATGCTGCATTTGCTCTATATGGTCTTGCAGATAATGAGGACAACATTGCAGCTCTTATTAAATTTGGAATTGTCCAGAAATTTCAAGATGGAGAATTCCTTGTTCAACGAACTAAGGATTGTGTTGAAAAGACATTGAAAAGATTAGAGGGGAAGATTTGTGGTCGAGTATTGAACAATCTATTATATCTGATGCGGGTTGCTGACAAGGCTATTCAATGTCGAGTGGCTTTGGCTTTTGCTCATCTTTGTAAGCCTGGTGATCGTCAAGTCATTTTTATTGAACACAAAGGATTGGAGCTGCTGGTGGGGCTTCTTGAGTCTAAAAGCCTGAAGCAGCAACATGATGGTTCATTGGCCTTGCACGCATTGGCTACAAAAGCCTCTCCACTCTCTCATGTAGATGCAGTTCCTCCAGCACCAAACTCACAGGTGTATTTGGGTGAGCAATATGTAAACAATCCGACACTTTCTGACATAACATTCTTAGTTGACGGTAAACAGTTTTATGCACACAGAATTTGTCTGCTTGCTTCTTCGGAAGCATTTCGAGCCATGTTTGATGGTGGATACAGGGAGAGAGATGCCAAGGATGTAGAGATTCCAAATATTAGATGGGACATTTTTGAACTGATGATGAGATTCATATACACGGGATCAGTTGAAGTCGATTTGGATATTGCTCACGATCTCCTCAAAGCTGCTGATCAGTATCTTTTAGAAGGTCTTAAGCGTCAATGTGAACATGCCATTGCTCAGGATATCTGTGTGGAAAATGTGTCTCTCATGTTTGAGTTATCAGAGGCCTATAACGCCATGTCGTTGATGCAAGCATGCATTCTGTTTGTACTAGAGCAGTTTGATAAGTTGAGCAAGAAACCATGGTTTCATCCACTAATGAAACGAATCATACCGGAGATCCACAGATTTTTCACTAAAGCACTTACAAAGCCTAACCAGGGTGGTTCCTCGCAGGATAAACTTGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006091 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009056 GO:0009057 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009628 GO:0009642 GO:0009644 GO:0009719 GO:0009725 GO:0009735 GO:0009765 GO:0009892 GO:0009941 GO:0009987 GO:0010033 GO:0010109 GO:0010205 GO:0010206 GO:0010304 GO:0015979 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0019538 GO:0019684 GO:0022607 GO:0030091 GO:0030163 GO:0031323 GO:0031324 GO:0031967 GO:0031975 GO:0031976 GO:0031977 GO:0031984 GO:0034357 GO:0034622 GO:0042221 GO:0042548 GO:0042623 GO:0042651 GO:0043155 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043467 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0048519 GO:0048523 GO:0048564 GO:0050789 GO:0050794 GO:0050896 GO:0055035 GO:0065003 GO:0065007 GO:0070011 GO:0071704 GO:0071840 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1905156

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA Peptidase_M41

Protein Analysis

711

Amino Acids

78.42

Weight (kDa)

6.44

Isoelectric Point (pI)

41.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ARM_ARMC5	PF24768	166 - 408	1e-15	ARMC5
ARM_PUB	PF25598	179 - 370	2.1e-07	Plant U-box protein ARM repeat region
Arm	PF00514	190 - 224	9e-06	Armadillo/beta-catenin-like repeat
BTB	PF00651	535 - 635	3.2e-24	BTB/POZ domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0011868)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50250 AT5G42270
fragaria_vesca	FvH4_2g37610 FvH4_2g37610 FvH4_2g37610 FvH4_2g37610
malus_domestica	MD08G1003700.v1.1 MD15G1003200.v1.1
prunus_persica	Prupe.1G355600_v2.0.a1 Prupe.1G355600_v2.0.a1
pyrus_communis	pycom15g00230
rosa_chinensis	RchiOBHm_Chr6g0304121
rosa_laevigata	RLG00000011013
rosa_multiflora	Rmu_ssc0000218.1_g000001 Rmu_ssc0000218.1_g000004
rosa_roxburghii	Rroxscaffold_7G00164050
rosa_rugosa	Rorug06G0327800
rosa_samantha	Rh6BG461000
rosa_wichuraiana	Rw6G038290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	33
AccBSI	CCGCTC	3 cut(s)	12, 275, 971
AccII	CGCG	3 cut(s)	141, 192, 380
AclWI	GGATC	6 cut(s)	99, 107, 116, 661, 1810, 2059
AcoI	YGGCCR	1 cut(s)	105
AcsI	RAATTY	4 cut(s)	1208, 1226, 1241, 1665
AcuI	CTGAAG	3 cut(s)	59, 683, 1499
AcyI	GRCGYC	3 cut(s)	28, 183, 305
AfaI	GTAC	4 cut(s)	639, 735, 975, 1995
AfiI	CCNNNNNNNGG	4 cut(s)	151, 220, 320, 2105
AflII	CTTAAG	1 cut(s)	1874
AjiI	CACGTC	1 cut(s)	148
AjnI	CCWGG	4 cut(s)	219, 729, 1402, 2103
AjuI	GAANNNNNNNTTGG	2 cut(s)	111, 143
AluBI	AGCT	8 cut(s)	49, 524, 650, 902, 1073, 1199, 1447, 1847
AluI	AGCT	8 cut(s)	49, 524, 650, 902, 1073, 1199, 1447, 1847
Alw21I	GWGCWC	1 cut(s)	354
Alw26I	GTCTC	1 cut(s)	1932
AlwI	GGATC	6 cut(s)	99, 107, 116, 661, 1810, 2059
Ama87I	CYCGRG	1 cut(s)	213
AoxI	GGCC	4 cut(s)	105, 657, 1503, 1950
ApaI	GGGCCC	1 cut(s)	661
ApoI	RAATTY	4 cut(s)	1208, 1226, 1241, 1665
AseI	ATTAAT	1 cut(s)	983
Asp700I	GAANNNNTTC	1 cut(s)	1692
AspLEI	GCGC	3 cut(s)	143, 194, 382
AspS9I	GGNCC	3 cut(s)	4, 657, 658
AsuHPI	GGTGA	5 cut(s)	10, 867, 993, 1418, 1601
AsuII	TTCGAA	1 cut(s)	1124
AvaI	CYCGRG	1 cut(s)	213
AvaII	GGWCC	1 cut(s)	4
BaeGI	GKGCMC	1 cut(s)	661
BanII	GRGCYC	2 cut(s)	220, 661
BauI	CACGAG	1 cut(s)	353
Bbv12I	GWGCWC	1 cut(s)	354
BccI	CCATC	5 cut(s)	500, 1229, 1487, 1703, 1755
BceAI	ACGGC	3 cut(s)	92, 380, 945
BciT130I	CCWGG	4 cut(s)	221, 731, 1404, 2105
BciVI	GTATCC	2 cut(s)	605, 1709
BclI	TGATCA	1 cut(s)	1852
BcoDI	GTCTC	1 cut(s)	1932
BfaI	CTAG	2 cut(s)	671, 1997
BfmI	CTRYAG	1 cut(s)	651
BfrI	CTTAAG	1 cut(s)	1874
BfuI	GTATCC	2 cut(s)	605, 1709
Bme1390I	CCNGG	4 cut(s)	221, 731, 1404, 2105
Bme18I	GGWCC	1 cut(s)	4
BmeT110I	CYCGRG	1 cut(s)	213
BmgBI	CACGTC	1 cut(s)	148
BmgT120I	GGNCC	3 cut(s)	4, 657, 658
BmiI	GGNNCC	4 cut(s)	279, 658, 659, 2113
BmrFI	CCNGG	4 cut(s)	221, 731, 1404, 2105
BmsI	GCATC	9 cut(s)	304, 418, 520, 825, 981, 1329, 1540, 1720, 1962
BpmI	CTGGAG	3 cut(s)	453, 980, 1545
Bpu10I	CCTNAGC	1 cut(s)	1902
Bpu14I	TTCGAA	1 cut(s)	1124
BpuEI	CTTGAG	3 cut(s)	152, 1094, 1484
BsaBI	GATNNNNATC	1 cut(s)	1857
BsaHI	GRCGYC	3 cut(s)	28, 183, 305
BsaJI	CCNNGG	5 cut(s)	201, 219, 1734, 2027, 2104
BsaWI	WCCGGW	1 cut(s)	2059
BsaXI	ACNNNNNCTCC	1 cut(s)	26
Bsc4I	CCNNNNNNNGG	4 cut(s)	151, 220, 320, 2105
Bse1I	ACTGG	1 cut(s)	997
Bse3DI	GCAATG	3 cut(s)	1077, 1191, 1896
Bse8I	GATNNNNATC	1 cut(s)	1857
BseBI	CCWGG	4 cut(s)	221, 731, 1404, 2105
BseDI	CCNNGG	5 cut(s)	201, 219, 1734, 2027, 2104
BseGI	GGATG	3 cut(s)	535, 1744, 2035
BseJI	GATNNNNATC	1 cut(s)	1857
BseLI	CCNNNNNNNGG	4 cut(s)	151, 220, 320, 2105
BseMI	GCAATG	3 cut(s)	1077, 1191, 1896
BseMII	CTCAG	3 cut(s)	741, 860, 1916
BseNI	ACTGG	1 cut(s)	997
BseRI	GAGGAG	2 cut(s)	591, 1829
BseSI	GKGCMC	1 cut(s)	661
BseX3I	CGGCCG	1 cut(s)	105
Bsh1236I	CGCG	3 cut(s)	141, 192, 380
Bsh1285I	CGRYCG	2 cut(s)	108, 190
BshFI	GGCC	4 cut(s)	107, 659, 1505, 1952
BsiEI	CGRYCG	2 cut(s)	108, 190
BsiHKAI	GWGCWC	1 cut(s)	354
BsiHKCI	CYCGRG	1 cut(s)	213
BsiSI	CCGG	6 cut(s)	89, 104, 281, 314, 404, 2060
BslFI	GGGAC	1 cut(s)	1778
BslI	CCNNNNNNNGG	4 cut(s)	151, 220, 320, 2105
BsmAI	GTCTC	1 cut(s)	1932
BsmFI	GGGAC	1 cut(s)	1778
BsmI	GAATGC	3 cut(s)	272, 674, 1983
BsnI	GGCC	4 cut(s)	107, 659, 1505, 1952
BsoBI	CYCGRG	1 cut(s)	213
Bsp119I	TTCGAA	1 cut(s)	1124
Bsp120I	GGGCCC	1 cut(s)	657
Bsp1286I	GDGCHC	3 cut(s)	220, 354, 661
Bsp19I	CCATGG	1 cut(s)	2027
BspANI	GGCC	4 cut(s)	107, 659, 1505, 1952
BspCNI	CTCAG	3 cut(s)	742, 861, 1915
BspFNI	CGCG	3 cut(s)	141, 192, 380
BspHI	TCATGA	1 cut(s)	550
BspLI	GGNNCC	4 cut(s)	279, 658, 659, 2113
BspMAI	CTGCAG	1 cut(s)	655
BspPI	GGATC	6 cut(s)	99, 107, 116, 661, 1810, 2059
BspT104I	TTCGAA	1 cut(s)	1124
BspTI	CTTAAG	1 cut(s)	1874
BsrBI	CCGCTC	3 cut(s)	12, 275, 971
BsrDI	GCAATG	3 cut(s)	1077, 1191, 1896
BsrI	ACTGG	1 cut(s)	997
BssECI	CCNNGG	5 cut(s)	201, 219, 1734, 2027, 2104
BssNI	GRCGYC	3 cut(s)	28, 183, 305
BssSI	CACGAG	1 cut(s)	353
BssT1I	CCWWGG	3 cut(s)	201, 1734, 2027
Bst2BI	CACGAG	1 cut(s)	353
Bst2UI	CCWGG	4 cut(s)	221, 731, 1404, 2105
Bst4CI	ACNGT	3 cut(s)	335, 1643, 1650
Bst6I	CTCTTC	1 cut(s)	811
BstACI	GRCGYC	3 cut(s)	28, 183, 305
BstAFI	CTTAAG	1 cut(s)	1874
BstBI	TTCGAA	1 cut(s)	1124
BstC8I	GCNNGC	5 cut(s)	1075, 1512, 1677, 1977, 1981
BstDEI	CTNAG	6 cut(s)	259, 750, 869, 1260, 1633, 1902
BstDSI	CCRYGG	1 cut(s)	2027
BstF5I	GGATG	3 cut(s)	535, 1744, 2035
BstFNI	CGCG	3 cut(s)	141, 192, 380
BstHHI	GCGC	3 cut(s)	143, 194, 382
BstMAI	GTCTC	1 cut(s)	1932
BstMCI	CGRYCG	2 cut(s)	108, 190
BstNI	CCWGG	4 cut(s)	221, 731, 1404, 2105
BstNSI	RCATGY	2 cut(s)	1895, 1983
BstSCI	CCNGG	4 cut(s)	219, 729, 1402, 2103
BstSFI	CTRYAG	1 cut(s)	651
BstSLI	GKGCMC	1 cut(s)	661
BstUI	CGCG	3 cut(s)	141, 192, 380
BstX2I	RGATCY	3 cut(s)	121, 666, 2064
BstYI	RGATCY	3 cut(s)	121, 666, 2064
BstZI	CGGCCG	1 cut(s)	105
BsuI	GTATCC	2 cut(s)	605, 1709
BsuRI	GGCC	4 cut(s)	107, 659, 1505, 1952
BtgI	CCRYGG	1 cut(s)	2027
BtgZI	GCGATG	1 cut(s)	376
BtrI	CACGTC	1 cut(s)	148
BtsCI	GGATG	3 cut(s)	535, 1744, 2035
Cac8I	GCNNGC	5 cut(s)	1075, 1512, 1677, 1977, 1981
CciI	TCATGA	1 cut(s)	550
CfoI	GCGC	3 cut(s)	143, 194, 382
Cfr13I	GGNCC	3 cut(s)	4, 657, 658
CseI	GACGC	4 cut(s)	36, 191, 313, 1868
CsiI	ACCWGGT	1 cut(s)	729
Csp6I	GTAC	4 cut(s)	638, 734, 974, 1994
CviAII	CATG	9 cut(s)	551, 1490, 1544, 1702, 1892, 1933, 1963, 1980, 2028
CviQI	GTAC	4 cut(s)	638, 734, 974, 1994
DdeI	CTNAG	6 cut(s)	259, 750, 869, 1260, 1633, 1902
DrdI	GACNNNNNNGTC	1 cut(s)	33
DseDI	GACNNNNNNGTC	1 cut(s)	33
EaeI	YGGCCR	1 cut(s)	105
EagI	CGGCCG	1 cut(s)	105
Eam1104I	CTCTTC	1 cut(s)	811
EarI	CTCTTC	1 cut(s)	811
EciI	GGCGGA	2 cut(s)	163, 339
EclXI	CGGCCG	1 cut(s)	105
Eco130I	CCWWGG	3 cut(s)	201, 1734, 2027
Eco147I	AGGCCT	1 cut(s)	1952
Eco24I	GRGCYC	2 cut(s)	220, 661
Eco32I	GATATC	1 cut(s)	1909
Eco47I	GGWCC	1 cut(s)	4
Eco52I	CGGCCG	1 cut(s)	105
Eco57I	CTGAAG	3 cut(s)	59, 683, 1499
Eco88I	CYCGRG	1 cut(s)	213
EcoO109I	RGGNCCY	2 cut(s)	657, 658
EcoRI	GAATTC	1 cut(s)	1241
EcoRII	CCWGG	4 cut(s)	219, 729, 1402, 2103
EcoRV	GATATC	1 cut(s)	1909
EcoT14I	CCWWGG	3 cut(s)	201, 1734, 2027
EcoT22I	ATGCAT	1 cut(s)	1985
EcoT38I	GRGCYC	2 cut(s)	220, 661
ErhI	CCWWGG	3 cut(s)	201, 1734, 2027
FaeI	CATG	9 cut(s)	554, 1493, 1547, 1705, 1895, 1936, 1966, 1983, 2031
FalI	AAGNNNNNCTT	2 cut(s)	111, 143
FaqI	GGGAC	1 cut(s)	1778
FatI	CATG	9 cut(s)	550, 1489, 1543, 1701, 1891, 1932, 1962, 1979, 2027
FauI	CCCGC	2 cut(s)	487, 1335
FbaI	TGATCA	1 cut(s)	1852
FokI	GGATG	3 cut(s)	542, 1751, 2022
FriOI	GRGCYC	2 cut(s)	220, 661
FspBI	CTAG	2 cut(s)	671, 1997
GlaI	GCGC	3 cut(s)	142, 193, 381
GsuI	CTGGAG	3 cut(s)	453, 980, 1545
HaeIII	GGCC	4 cut(s)	107, 659, 1505, 1952
HapII	CCGG	6 cut(s)	89, 104, 281, 314, 404, 2060
HgaI	GACGC	4 cut(s)	36, 191, 313, 1868
HhaI	GCGC	3 cut(s)	143, 194, 382
Hin1I	GRCGYC	3 cut(s)	28, 183, 305
Hin1II	CATG	9 cut(s)	554, 1493, 1547, 1705, 1895, 1936, 1966, 1983, 2031
Hin6I	GCGC	3 cut(s)	141, 192, 380
HinP1I	GCGC	3 cut(s)	141, 192, 380
HincII	GTYRAC	1 cut(s)	1639
HindII	GTYRAC	1 cut(s)	1639
HpaII	CCGG	6 cut(s)	89, 104, 281, 314, 404, 2060
HphI	GGTGA	5 cut(s)	10, 867, 993, 1418, 1601
Hpy166II	GTNNAC	6 cut(s)	802, 875, 1603, 1639, 1646, 1889
Hpy8I	GTNNAC	6 cut(s)	802, 875, 1603, 1639, 1646, 1889
Hpy99I	CGWCG	2 cut(s)	113, 185
HpyAV	CCTTC	3 cut(s)	178, 581, 1862
HpyCH4III	ACNGT	3 cut(s)	335, 1643, 1650
HpyCH4IV	ACGT	1 cut(s)	147
HpyF3I	CTNAG	6 cut(s)	259, 750, 869, 1260, 1633, 1902
HpySE526I	ACGT	1 cut(s)	147
Hsp92I	GRCGYC	3 cut(s)	28, 183, 305
Hsp92II	CATG	9 cut(s)	554, 1493, 1547, 1705, 1895, 1936, 1966, 1983, 2031
HspAI	GCGC	3 cut(s)	141, 192, 380
Ksp22I	TGATCA	1 cut(s)	1852
LmnI	GCTCC	5 cut(s)	17, 272, 968, 999, 1444
LweI	GCATC	9 cut(s)	304, 418, 520, 825, 981, 1329, 1540, 1720, 1962
MabI	ACCWGGT	1 cut(s)	729
MaeI	CTAG	2 cut(s)	671, 1997
MaeII	ACGT	1 cut(s)	147
MaeIII	GTNAC	4 cut(s)	16, 539, 999, 1113
MbiI	CCGCTC	3 cut(s)	12, 275, 971
MboII	GAAGA	5 cut(s)	80, 676, 798, 1312, 1674
MfeI	CAATTG	1 cut(s)	1038
MflI	RGATCY	3 cut(s)	121, 666, 2064
MhlI	GDGCHC	3 cut(s)	220, 354, 661
MluCI	AATT	8 cut(s)	786, 984, 1038, 1208, 1215, 1226, 1241, 1665
MlyI	GAGTC	2 cut(s)	155, 1475
MmeI	TCCRAC	2 cut(s)	204, 1634
Mph1103I	ATGCAT	1 cut(s)	1985
MroXI	GAANNNNTTC	1 cut(s)	1692
MslI	CAYNNNNRTG	2 cut(s)	1089, 1548
MspA1I	CMGCKG	1 cut(s)	650
MspCI	CTTAAG	1 cut(s)	1874
MspI	CCGG	6 cut(s)	89, 104, 281, 314, 404, 2060
MspR9I	CCNGG	4 cut(s)	221, 731, 1404, 2105
MunI	CAATTG	1 cut(s)	1038
Mva1269I	GAATGC	3 cut(s)	272, 674, 1983
MvaI	CCWGG	4 cut(s)	221, 731, 1404, 2105
MvnI	CGCG	3 cut(s)	141, 192, 380
NcoI	CCATGG	1 cut(s)	2027
NlaIII	CATG	9 cut(s)	554, 1493, 1547, 1705, 1895, 1936, 1966, 1983, 2031
NlaIV	GGNNCC	4 cut(s)	279, 658, 659, 2113
NmuCI	GTSAC	2 cut(s)	16, 999
NsiI	ATGCAT	1 cut(s)	1985
NspI	RCATGY	2 cut(s)	1895, 1983
NspV	TTCGAA	1 cut(s)	1124
PacI	TTAATTAA	1 cut(s)	987
PaeI	GCATGC	1 cut(s)	1983
PagI	TCATGA	1 cut(s)	550
PceI	AGGCCT	1 cut(s)	1952
PcsI	WCGNNNNNNNCGW	1 cut(s)	237
PctI	GAATGC	3 cut(s)	272, 674, 1983
PdmI	GAANNNNTTC	1 cut(s)	1692
PleI	GAGTC	2 cut(s)	155, 1474
PpsI	GAGTC	2 cut(s)	155, 1474
PshBI	ATTAAT	1 cut(s)	983
Psp6I	CCWGG	4 cut(s)	219, 729, 1402, 2103
PspGI	CCWGG	4 cut(s)	219, 729, 1402, 2103
PspN4I	GGNNCC	4 cut(s)	279, 658, 659, 2113
PspOMI	GGGCCC	1 cut(s)	657
PspPI	GGNCC	3 cut(s)	4, 657, 658
PsrI	GAACNNNNNNTAC	2 cut(s)	1539, 1571
PstI	CTGCAG	1 cut(s)	655
PsuI	RGATCY	3 cut(s)	121, 666, 2064
PvuII	CAGCTG	1 cut(s)	650
RsaI	GTAC	4 cut(s)	639, 735, 975, 1995
RsaNI	GTAC	4 cut(s)	638, 734, 974, 1994
RseI	CAYNNNNRTG	2 cut(s)	1089, 1548
Sau96I	GGNCC	3 cut(s)	4, 657, 658
SchI	GAGTC	2 cut(s)	155, 1475
ScrFI	CCNGG	4 cut(s)	221, 731, 1404, 2105
SduI	GDGCHC	3 cut(s)	220, 354, 661
SexAI	ACCWGGT	1 cut(s)	729
SfaNI	GCATC	9 cut(s)	304, 418, 520, 825, 981, 1329, 1540, 1720, 1962
SfcI	CTRYAG	1 cut(s)	651
SfuI	TTCGAA	1 cut(s)	1124
SinI	GGWCC	1 cut(s)	4
SmiMI	CAYNNNNRTG	2 cut(s)	1089, 1548
SmlI	CTYRAG	4 cut(s)	131, 1109, 1463, 1874
SmoI	CTYRAG	4 cut(s)	131, 1109, 1463, 1874
SphI	GCATGC	1 cut(s)	1983
Sse9I	AATT	8 cut(s)	786, 984, 1038, 1208, 1215, 1226, 1241, 1665
SseBI	AGGCCT	1 cut(s)	1952
SspI	AATATT	1 cut(s)	1756
SspMI	CTAG	2 cut(s)	671, 1997
StuI	AGGCCT	1 cut(s)	1952
StyD4I	CCNGG	4 cut(s)	219, 729, 1402, 2103
StyI	CCWWGG	3 cut(s)	201, 1734, 2027
TaaI	ACNGT	3 cut(s)	335, 1643, 1650
TaiI	ACGT	1 cut(s)	150
TaqI	TCGA	9 cut(s)	111, 159, 225, 360, 1124, 1312, 1369, 1696, 1815
TasI	AATT	8 cut(s)	786, 984, 1038, 1208, 1215, 1226, 1241, 1665
TatI	WGTACW	1 cut(s)	1993
TauI	GCSGC	7 cut(s)	12, 33, 197, 200, 212, 310, 313
TseFI	GTSAC	2 cut(s)	16, 999
Tsp45I	GTSAC	2 cut(s)	16, 999
TspDTI	ATGAA	6 cut(s)	786, 1146, 1488, 1780, 2024, 2060
TspGWI	ACGGA	3 cut(s)	4, 316, 333
Vha464I	CTTAAG	1 cut(s)	1874
VpaK11BI	GGWCC	1 cut(s)	4
VspI	ATTAAT	1 cut(s)	983
XapI	RAATTY	4 cut(s)	1208, 1226, 1241, 1665
XceI	RCATGY	2 cut(s)	1895, 1983
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1758
XmnI	GAANNNNTTC	1 cut(s)	1692
XspI	CTAG	2 cut(s)	671, 1997
Zsp2I	ATGCAT	1 cut(s)	1985

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.