Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004094

Physical Location & Seq

Genomic Coordinates Forward (+)

17500376 .. 17505713

Gene Structure 5338 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G43560.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3168 bp

ATGTCAGAGAGTACTAATGAAGATAGTGGAGCAGGAAGATCATCACTGGAAGAGAATTCAAATGGACAAAGAAGTCAATCAGAAGAAGCAATCGCTGAGTGGCGTTCTTCTGAACAAGTTGAGAATGGAACTCCTTCTACATCTCCACCGTATTGGGACATCGATGATGATGACGATTTTGGATCAAAACCATCTCAACTATTTGGGAAAAATACTTGGACGATTGAGAAATTTTCAGATATCAACAAACGAGAGCTCCGCGGCGATGTTTTTGAAGTCGGGGGTTACAAATGGTATATATTAATTTATCCACAAGGGTGTGATGTTTGCAACCATCTCTCTTTGTTTCTATGTGTTGCACACCATGAAAAGCTTCTTCCAGGCTGGAGTCATTTTGCTCAGTTTACTATAGCTGTGTCGAATAAAGATCCGAAGAAGTCAAAGCATTCAGATACGTTACACCGGTTTTGGAAGAAAGAGCATGATTGGGGTTGGAAGAAATTTATTGAGTTACCTAAATTGAAGGAAGGGTTTATAGATGATTCTGGTTGTCTTACAATTAAAGCTCAAGTGCAGGTGATCAGAGAGAGAGTGGACCGACCTTTTCGCTGCCTTCATTATAAATATAGGGAGGAACTTGTTAGGGTGTATTTGGGAAATGTAGAGCAAATTTGCTGGCGGTTTGTGGAAGAGAAAAGAAGCAAGCTTGGTAGGTTGATAGAGGACAAGGCAAAATGGAAAAGCTTCTGTGCTTTCTGGATGGGGTTGGACCAAAATTCAAGGCGTCGAATGTCCCGAGAGAAAATGGATGTGATTCTAAAAATAGTTGTAAAACACTTCTTTGTCGAGAAGGAAGTTACATCTACTTTGGTGATGGATTCCTTGTATAGTGGATTGAAGGCTCTTGAAGGCCAAAATAAGAACAAGGAGAGTAGGCCGAGACTAATGGATACTGAAGAATCCACAGCTCCAATTGTTAGCGTGGACAAAGATTCGTTTGCATTAGTTGATGATGTGTTATTACTCTTAGAGAAGGCTGCTCTGGAGCCATTGCCTAAAAAAGAGGAAAAGAGTTCTCAAAACCGTACGAAGGATGGGAATGCTGGAGAGGAATTCAGTAGAGAAGCCGTTGAGCGTGATGATAGGCGTTTAACTGAATTGGGTAGACGGACTGTGGAGATATTTGTTCTTGCACATATCTTCAGCAACAAAATTGAAGTTGCATACCAAGAAGCTATTGCATGGAAAAGGCAAGAAGAACTTATTCGTGAAGAAGAGGAAGCGTGGCTGGCAGAAAGCGAACAGAAGGGCAAAAGAGGAGCATCTGAAAAAGAGAAGAAATCTAAGAAGAAACAGGCGAAACAGAAAAAGAACAAAAACAAAGGAAAGGAAATGAGGAAAGAAGACAAGGTGAGAACCCAAACAGAAGAAAGGGAAATTGAGAAAGAGGAATGTGTGAGAGCGATAGCAGAATCGTCAGCTGAAAAACCTGACACACTTGGAGATGTCTCTGACGTGTCTGATTCAGTAGATAGTTCAGCTGAAATACTTCAGCTTGATTCAGAAGATAGAGAGAGTAGTCCTGTTCATTGGGAAATGGATGCCTCAGAGGTTCATCCTCCTTCTGCAGGAGACACTAGCAGAGGAAGAGGCAATTCTTTTTCTATACCTAATGGAGTTGCAGAAAGAAAGGGTCTGTCCACAATGGATGATAGTTCTTCAACCTGTTCTAATGACTCGATTCAATCAGGGGTAGCCAATGGGTCATACAAAGGGAATGTATTAAATTGCCAAAGCCAAAAGTGGTTTAGCAATGGAAAAATACAACCAGGAAAAGTATCTGATTCCAACAGTTTAGCCAGTGAAAAAGAGCATCAACCTTCAAGACTTGCATCTGACCCTAAAAATCAGAGCCATTCTTCTGATATACGCAGAGTTGGTGAAGCTGACATAGTTATCTCCCACATTCAAAAACCAGAGAGCCCTAAGGAACGTAGTCCTGTTAGCAAGGATCCCAACATGATTCAGATGAAAGAGAAAAGTGCTGCGGTACTTTCCCCATCCAGAGCTGCTCCTTGGAATCCTCCGTCTCCAGTGCAAGCAAAACCGGAGAAAAAGGGTGTTTCAAATGTAGAGGCGGTTCCAAACAGGAAAGTCATATCTGTTAAATCACCTTCATCACATCATGCATCACCATCTCGTGAAGCTCAGTTGCAAACAGTGGGTCCTAGAGCTGATATACAGAAAATCGCTTCTCCGAAACCTGTGGAACAACCAGCACCTCCTATGTCAAGGCCTTTGAGTGCTCCTATAATCCCTCCAACGCAAGCTGCACCTGTAATATCTGCTGTTCAAACCTCGACTGCGTCCCTTGCTCGTTCAATGAGCTCAACAGGGCGTTTAGGTTCACCGACACATAGCCAAGCTTACAATCCTCAATCCTACAAACATGCCATAGTGGGTTCATCTGGTTTCACCCACCCAAGCTCTCAATCGAGTGGAACAAGCACATTGCCGCCTTATTCACATCCGTCTCCTATCTCAGTATCAAATCAGTCTGGTTTCCCTATCAATGTTGGCTCTTGGGATGTTTCTTCTGGTGGGCTATTGTGGACCGGTGGTTCGAGTTCAACCAGAGATACAACAACAACCATCAGCGGGAATCACAAAACAAACACTTACAACGCACCCGTAGTAACTACCAGCATCAGGCCTACTAATGTTCAGATAGGGAGAACGGCACAGAGTCTGATGACCGATGAGTTCCCTCACCTTGATATCATCAATGATCTGCTTGCAGACGAACACGGTACAATGGATAATAGCGTATACCGTGTACCACAACAGTTCAACAACCAGTACTCATATCATGGCGGTGCGGATCTCGGGATCTCTAGCAGGTCTAGGAGTTACAGTGATGATGGATTTCACCAGTCTTACGGTGAATACATGCCACATTCTGCTTCTTCCTCGCCATATGGTAATGGGCAAACACAATCGCAATGGCAGATGGCAAATATGGATTTCTCTTTACCGGCTATGAGGAACCAAGACGATGTATCAGCATCAGCAACAGCTACTTACTCTTACTTTGATTTAGATTCATCAAACCCGAATTTGTCTGGAATCAACGGCTATAGGGACTTCAGGCCATCGAACGGACACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006914 GO:0006950 GO:0006952 GO:0006955 GO:0006996 GO:0007033 GO:0008150 GO:0008152 GO:0009056 GO:0009987 GO:0016043 GO:0016236 GO:0019899 GO:0019900 GO:0019901 GO:0043424 GO:0044237 GO:0044248 GO:0044424 GO:0044464 GO:0045087 GO:0050896 GO:0061919 GO:0071840 GO:1905037

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MATH

Protein Analysis

1055

Amino Acids

117.45

Weight (kDa)

6.44

Isoelectric Point (pI)

55.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MATH_2	PF22486	72 - 191	1.8e-28	MATH domain
MATH	PF00917	75 - 190	5.8e-20	MATH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004094)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04300 AT1G04300 AT1G04300 AT1G04300 AT1G04300 AT1G04300 AT5G43560 AT5G43560 AT5G52330 AT5G52330 AT5G52330 AT5G52330
fragaria_vesca	FvH4_4g02970 FvH4_4g02970
malus_domestica	MD13G1209100.v1.1 MD16G1211000.v1.1
prunus_persica	Prupe.1G033200_v2.0.a1 Prupe.1G033200_v2.0.a1
pyrus_communis	pycom13g18110 pycom13g18140 pycom16g17710
rosa_chinensis	RchiOBHm_Chr4g0391041
rosa_laevigata	RLG00000009900
rosa_multiflora	Rmu_sc0001824.1_g000032
rosa_roxburghii	Rroxscaffold_5G00336880
rosa_rugosa	Rorug03G0333900 Rorug03G0333900 Rorug03G0334000
rosa_samantha	Rh4AG034400 Rh4BG029300 Rh4CG038100 Rh4DG031700
rosa_wichuraiana	Rw4G002680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	621
AarI	CACCTGC	1 cut(s)	565
AasI	GACNNNNNNGTC	1 cut(s)	72
Acc36I	ACCTGC	2 cut(s)	565, 2889
AccI	GTMKAC	2 cut(s)	1165, 2829
AccII	CGCG	1 cut(s)	261
AciI	CCGC	9 cut(s)	259, 261, 679, 2048, 2138, 2516, 2658, 2874, 2879
AclWI	GGATC	6 cut(s)	190, 422, 2006, 2019, 2889, 2897
AcsI	RAATTY	7 cut(s)	55, 230, 500, 669, 775, 1112, 3115
AcuI	CTGAAG	4 cut(s)	975, 1186, 1535, 3130
AcyI	GRCGYC	1 cut(s)	784
AfaI	GTAC	6 cut(s)	13, 1087, 2052, 2812, 2838, 2861
AfiI	CCNNNNNNNGG	5 cut(s)	1090, 1628, 2658, 2709, 3158
AflIII	ACRYGT	1 cut(s)	1515
AgeI	ACCGGT	2 cut(s)	462, 2615
AjiI	CACGTC	1 cut(s)	1516
AjnI	CCWGG	2 cut(s)	379, 1828
AleI	CACNNNNGTG	1 cut(s)	316
AloI	GAACNNNNNNTCC	2 cut(s)	2605, 2637
Alw21I	GWGCWC	3 cut(s)	258, 2308, 2390
Alw26I	GTCTC	5 cut(s)	934, 1513, 1626, 2094, 2538
AlwI	GGATC	6 cut(s)	190, 422, 2006, 2019, 2889, 2897
AlwNI	CAGNNNCTG	1 cut(s)	2749
Ama87I	CYCGRG	2 cut(s)	795, 2885
AoxI	GGCC	5 cut(s)	910, 935, 2294, 2711, 3149
ApeKI	GCWGC	5 cut(s)	609, 1037, 2045, 2069, 2330
ApoI	RAATTY	7 cut(s)	55, 230, 500, 669, 775, 1112, 3115
ArsI	GACNNNNNNTTYG	4 cut(s)	2209, 2241, 2605, 2637
AseI	ATTAAT	1 cut(s)	302
AsiGI	ACCGGT	2 cut(s)	462, 2615
Asp700I	GAANNNNTTC	5 cut(s)	133, 372, 743, 1263, 1548
AspS9I	GGNCC	4 cut(s)	595, 769, 2225, 2613
AvaI	CYCGRG	2 cut(s)	795, 2885
AvaII	GGWCC	4 cut(s)	595, 769, 2225, 2613
AxyI	CCTNAGG	1 cut(s)	1986
BamHI	GGATCC	1 cut(s)	2011
BanII	GRGCYC	3 cut(s)	258, 1985, 2390
BauI	CACGAG	1 cut(s)	2199
BbsI	GAAGAC	1 cut(s)	1410
Bbv12I	GWGCWC	3 cut(s)	258, 2308, 2390
BbvI	GCAGC	5 cut(s)	596, 1024, 2032, 2056, 2317
BceAI	ACGGC	3 cut(s)	1112, 2754, 3148
BciT130I	CCWGG	2 cut(s)	381, 1830
BciVI	GTATCC	1 cut(s)	943
BclI	TGATCA	1 cut(s)	579
BcoDI	GTCTC	5 cut(s)	934, 1513, 1626, 2094, 2538
BfaI	CTAG	4 cut(s)	1638, 2229, 2895, 2904
BfmI	CTRYAG	3 cut(s)	408, 1626, 3136
BfuAI	ACCTGC	2 cut(s)	565, 2889
BfuI	GTATCC	1 cut(s)	943
BisI	GCNGC	7 cut(s)	262, 610, 1038, 2046, 2070, 2331, 2516
BlsI	GCNGC	7 cut(s)	263, 611, 1039, 2047, 2071, 2332, 2517
BmcAI	AGTACT	2 cut(s)	13, 2861
Bme1390I	CCNGG	2 cut(s)	381, 1830
Bme18I	GGWCC	4 cut(s)	595, 769, 2225, 2613
BmeT110I	CYCGRG	2 cut(s)	795, 2885
BmgBI	CACGTC	1 cut(s)	1516
BmgT120I	GGNCC	4 cut(s)	595, 769, 2225, 2613
BmiI	GGNNCC	5 cut(s)	1047, 2013, 2142, 2226, 3047
BmrFI	CCNGG	2 cut(s)	381, 1830
BmsI	GCATC	7 cut(s)	1331, 1591, 1882, 1901, 2198, 2715, 3074
BpiI	GAAGAC	1 cut(s)	1410
BpmI	CTGGAG	4 cut(s)	406, 1064, 1125, 2076
BpuEI	CTTGAG	1 cut(s)	552
Bsa29I	ATCGAT	1 cut(s)	162
BsaHI	GRCGYC	1 cut(s)	784
BsaJI	CCNNGG	2 cut(s)	259, 2075
BsaWI	WCCGGW	3 cut(s)	462, 2107, 2615
BsaXI	ACNNNNNCTCC	4 cut(s)	240, 270, 2899, 2929
Bsc4I	CCNNNNNNNGG	5 cut(s)	1090, 1628, 2658, 2709, 3158
Bse118I	RCCGGY	3 cut(s)	462, 2615, 3034
Bse1I	ACTGG	5 cut(s)	51, 1860, 2093, 2857, 2932
Bse21I	CCTNAGG	1 cut(s)	1986
Bse3DI	GCAATG	4 cut(s)	1049, 1819, 2510, 3008
BseBI	CCWGG	2 cut(s)	381, 1830
BseCI	ATCGAT	1 cut(s)	162
BseDI	CCNNGG	2 cut(s)	259, 2075
BseGI	GGATG	9 cut(s)	765, 814, 1099, 1606, 1615, 1714, 2060, 2527, 2593
BseLI	CCNNNNNNNGG	5 cut(s)	1090, 1628, 2658, 2709, 3158
BseMI	GCAATG	4 cut(s)	1049, 1819, 2510, 3008
BseMII	CTCAG	5 cut(s)	87, 413, 1620, 2222, 2556
BseNI	ACTGG	5 cut(s)	51, 1860, 2093, 2857, 2932
BseRI	GAGGAG	1 cut(s)	1332
BseXI	GCAGC	5 cut(s)	596, 1024, 2032, 2056, 2317
BsgI	GTGCAG	2 cut(s)	593, 2316
Bsh1236I	CGCG	1 cut(s)	261
BshFI	GGCC	5 cut(s)	912, 937, 2296, 2713, 3151
BshTI	ACCGGT	2 cut(s)	462, 2615
BshVI	ATCGAT	1 cut(s)	162
BsiHKAI	GWGCWC	3 cut(s)	258, 2308, 2390
BsiHKCI	CYCGRG	2 cut(s)	795, 2885
BsiSI	CCGG	4 cut(s)	463, 2108, 2616, 3035
BsiWI	CGTACG	1 cut(s)	1085
BslFI	GGGAC	4 cut(s)	170, 778, 2353, 3155
BslI	CCNNNNNNNGG	5 cut(s)	1090, 1628, 2658, 2709, 3158
BsmAI	GTCTC	5 cut(s)	934, 1513, 1626, 2094, 2538
BsmBI	CGTCTC	2 cut(s)	2094, 2538
BsmFI	GGGAC	4 cut(s)	170, 778, 2353, 3155
BsmI	GAATGC	2 cut(s)	445, 1105
BsnI	GGCC	5 cut(s)	912, 937, 2296, 2713, 3151
BsoBI	CYCGRG	2 cut(s)	795, 2885
Bsp1286I	GDGCHC	4 cut(s)	258, 1985, 2308, 2390
Bsp143I	GATC	8 cut(s)	38, 182, 427, 579, 2011, 2788, 2881, 2889
BspACI	CCGC	9 cut(s)	259, 261, 679, 2048, 2138, 2516, 2658, 2874, 2879
BspANI	GGCC	5 cut(s)	912, 937, 2296, 2713, 3151
BspCNI	CTCAG	5 cut(s)	88, 412, 1619, 2221, 2555
BspDI	ATCGAT	1 cut(s)	162
BspFNI	CGCG	1 cut(s)	261
BspLI	GGNNCC	5 cut(s)	1047, 2013, 2142, 2226, 3047
BspMAI	CTGCAG	1 cut(s)	1630
BspMI	ACCTGC	2 cut(s)	565, 2889
BspPI	GGATC	6 cut(s)	190, 422, 2006, 2019, 2889, 2897
BsrDI	GCAATG	4 cut(s)	1049, 1819, 2510, 3008
BsrFI	RCCGGY	3 cut(s)	462, 2615, 3034
BsrI	ACTGG	5 cut(s)	51, 1860, 2093, 2857, 2932
BssAI	RCCGGY	3 cut(s)	462, 2615, 3034
BssECI	CCNNGG	2 cut(s)	259, 2075
BssMI	GATC	8 cut(s)	38, 182, 427, 579, 2011, 2788, 2881, 2889
BssNAI	GTATAC	1 cut(s)	2830
BssNI	GRCGYC	1 cut(s)	784
BssSI	CACGAG	1 cut(s)	2199
BssT1I	CCWWGG	1 cut(s)	2075
Bst1107I	GTATAC	1 cut(s)	2830
Bst2BI	CACGAG	1 cut(s)	2199
Bst2UI	CCWGG	2 cut(s)	381, 1830
Bst6I	CTCTTC	4 cut(s)	45, 684, 1269, 1642
BstACI	GRCGYC	1 cut(s)	784
BstC8I	GCNNGC	6 cut(s)	677, 704, 1290, 2100, 2328, 2796
BstDEI	CTNAG	8 cut(s)	96, 399, 1027, 1344, 1606, 1986, 2208, 2542
BstDSI	CCRYGG	1 cut(s)	259
BstENI	CCTNNNNNAGG	1 cut(s)	1626
BstF5I	GGATG	9 cut(s)	765, 814, 1099, 1606, 1615, 1714, 2060, 2527, 2593
BstFNI	CGCG	1 cut(s)	261
BstKTI	GATC	8 cut(s)	41, 185, 430, 582, 2014, 2791, 2884, 2892
BstMAI	GTCTC	5 cut(s)	934, 1513, 1626, 2094, 2538
BstMBI	GATC	8 cut(s)	38, 182, 427, 579, 2011, 2788, 2881, 2889
BstMWI	GCNNNNNNNGC	2 cut(s)	1289, 2372
BstNI	CCWGG	2 cut(s)	381, 1830
BstNSI	RCATGY	2 cut(s)	2453, 2953
BstSCI	CCNGG	2 cut(s)	379, 1828
BstSFI	CTRYAG	3 cut(s)	408, 1626, 3136
BstUI	CGCG	1 cut(s)	261
BstV1I	GCAGC	5 cut(s)	596, 1024, 2032, 2056, 2317
BstV2I	GAAGAC	1 cut(s)	1410
BstX2I	RGATCY	4 cut(s)	427, 2011, 2881, 2889
BstXI	CCANNNNNNTGG	1 cut(s)	153
BstYI	RGATCY	4 cut(s)	427, 2011, 2881, 2889
BstZ17I	GTATAC	1 cut(s)	2830
Bsu15I	ATCGAT	1 cut(s)	162
Bsu36I	CCTNAGG	1 cut(s)	1986
BsuI	GTATCC	1 cut(s)	943
BsuRI	GGCC	5 cut(s)	912, 937, 2296, 2713, 3151
BsuTUI	ATCGAT	1 cut(s)	162
BtgI	CCRYGG	1 cut(s)	259
BtgZI	GCGATG	1 cut(s)	279
BtrI	CACGTC	1 cut(s)	1516
BtsCI	GGATG	9 cut(s)	765, 814, 1099, 1606, 1615, 1714, 2060, 2527, 2593
BtsIMutI	CAGTG	6 cut(s)	44, 1867, 2100, 2226, 2920, 3163
BveI	ACCTGC	2 cut(s)	565, 2889
Cac8I	GCNNGC	6 cut(s)	677, 704, 1290, 2100, 2328, 2796
CaiI	CAGNNNCTG	1 cut(s)	2749
Cfr10I	RCCGGY	3 cut(s)	462, 2615, 3034
Cfr13I	GGNCC	4 cut(s)	595, 769, 2225, 2613
Cfr42I	CCGCGG	1 cut(s)	262
ClaI	ATCGAT	1 cut(s)	162
CseI	GACGC	2 cut(s)	773, 2355
Csp6I	GTAC	6 cut(s)	12, 1086, 2051, 2811, 2837, 2860
CspAI	ACCGGT	2 cut(s)	462, 2615
CviAII	CATG	8 cut(s)	365, 482, 1242, 2020, 2186, 2450, 2870, 2950
CviQI	GTAC	6 cut(s)	12, 1086, 2051, 2811, 2837, 2860
DdeI	CTNAG	8 cut(s)	96, 399, 1027, 1344, 1606, 1986, 2208, 2542
DpnI	GATC	8 cut(s)	40, 184, 429, 581, 2013, 2790, 2883, 2891
DpnII	GATC	8 cut(s)	38, 182, 427, 579, 2011, 2788, 2881, 2889
DrdI	GACNNNNNNGTC	1 cut(s)	72
DseDI	GACNNNNNNGTC	1 cut(s)	72
Eam1104I	CTCTTC	4 cut(s)	45, 684, 1269, 1642
EarI	CTCTTC	4 cut(s)	45, 684, 1269, 1642
Ecl136II	GAGCTC	2 cut(s)	256, 2388
Eco130I	CCWWGG	1 cut(s)	2075
Eco147I	AGGCCT	2 cut(s)	2296, 2713
Eco24I	GRGCYC	3 cut(s)	258, 1985, 2390
Eco32I	GATATC	2 cut(s)	241, 2779
Eco47I	GGWCC	4 cut(s)	595, 769, 2225, 2613
Eco53kI	GAGCTC	2 cut(s)	256, 2388
Eco57I	CTGAAG	4 cut(s)	975, 1186, 1535, 3130
Eco81I	CCTNAGG	1 cut(s)	1986
Eco88I	CYCGRG	2 cut(s)	795, 2885
EcoICRI	GAGCTC	2 cut(s)	256, 2388
EcoNI	CCTNNNNNAGG	1 cut(s)	1626
EcoO109I	RGGNCCY	1 cut(s)	2225
EcoRI	GAATTC	2 cut(s)	55, 1112
EcoRII	CCWGG	2 cut(s)	379, 1828
EcoRV	GATATC	2 cut(s)	241, 2779
EcoT14I	CCWWGG	1 cut(s)	2075
EcoT22I	ATGCAT	1 cut(s)	2191
EcoT38I	GRGCYC	3 cut(s)	258, 1985, 2390
ErhI	CCWWGG	1 cut(s)	2075
Esp3I	CGTCTC	2 cut(s)	2094, 2538
FaeI	CATG	8 cut(s)	368, 485, 1245, 2023, 2189, 2453, 2873, 2953
FalI	AAGNNNNNCTT	2 cut(s)	1245, 1277
FaqI	GGGAC	4 cut(s)	170, 778, 2353, 3155
FatI	CATG	8 cut(s)	364, 481, 1241, 2019, 2185, 2449, 2869, 2949
FauI	CCCGC	1 cut(s)	2651
FauNDI	CATATG	1 cut(s)	2977
FbaI	TGATCA	1 cut(s)	579
FblI	GTMKAC	2 cut(s)	1165, 2829
Fnu4HI	GCNGC	7 cut(s)	262, 610, 1038, 2046, 2070, 2331, 2516
FokI	GGATG	9 cut(s)	772, 821, 1106, 1602, 1613, 1721, 2047, 2514, 2600
FriOI	GRGCYC	3 cut(s)	258, 1985, 2390
Fsp4HI	GCNGC	7 cut(s)	262, 610, 1038, 2046, 2070, 2331, 2516
FspBI	CTAG	4 cut(s)	1638, 2229, 2895, 2904
GluI	GCNGC	7 cut(s)	262, 610, 1038, 2046, 2070, 2331, 2516
GsuI	CTGGAG	4 cut(s)	406, 1064, 1125, 2076
HaeIII	GGCC	5 cut(s)	912, 937, 2296, 2713, 3151
HapII	CCGG	4 cut(s)	463, 2108, 2616, 3035
HgaI	GACGC	2 cut(s)	773, 2355
Hin1I	GRCGYC	1 cut(s)	784
Hin1II	CATG	8 cut(s)	368, 485, 1245, 2023, 2189, 2453, 2873, 2953
HindIII	AAGCTT	4 cut(s)	371, 704, 742, 2424
HpaII	CCGG	4 cut(s)	463, 2108, 2616, 3035
Hpy166II	GTNNAC	9 cut(s)	405, 595, 985, 1166, 1701, 2408, 2613, 2830, 2837
Hpy8I	GTNNAC	9 cut(s)	405, 595, 985, 1166, 1701, 2408, 2613, 2830, 2837
Hpy99I	CGWCG	1 cut(s)	789
HpyCH4IV	ACGT	3 cut(s)	455, 1515, 1993
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1289, 2372
HpyF3I	CTNAG	8 cut(s)	96, 399, 1027, 1344, 1606, 1986, 2208, 2542
HpySE526I	ACGT	3 cut(s)	455, 1515, 1993
Hsp92I	GRCGYC	1 cut(s)	784
Hsp92II	CATG	8 cut(s)	368, 485, 1245, 2023, 2189, 2453, 2873, 2953
Ksp22I	TGATCA	1 cut(s)	579
KspI	CCGCGG	1 cut(s)	262
Kzo9I	GATC	8 cut(s)	38, 182, 427, 579, 2011, 2788, 2881, 2889
LmnI	GCTCC	7 cut(s)	29, 261, 973, 1045, 1319, 2077, 2311
Lsp1109I	GCAGC	5 cut(s)	596, 1024, 2032, 2056, 2317
LweI	GCATC	7 cut(s)	1331, 1591, 1882, 1901, 2198, 2715, 3074
MaeI	CTAG	4 cut(s)	1638, 2229, 2895, 2904
MaeII	ACGT	3 cut(s)	455, 1515, 1993
MaeIII	GTNAC	6 cut(s)	284, 456, 510, 856, 2695, 2909
MalI	GATC	8 cut(s)	40, 184, 429, 581, 2013, 2790, 2883, 2891
MboI	GATC	8 cut(s)	38, 182, 427, 579, 2011, 2788, 2881, 2889
MfeI	CAATTG	1 cut(s)	972
MflI	RGATCY	4 cut(s)	427, 2011, 2881, 2889
MhlI	GDGCHC	4 cut(s)	258, 1985, 2308, 2390
MlyI	GAGTC	3 cut(s)	397, 1730, 2755
MmeI	TCCRAC	4 cut(s)	473, 747, 1872, 2345
Mph1103I	ATGCAT	1 cut(s)	2191
MroXI	GAANNNNTTC	5 cut(s)	133, 372, 743, 1263, 1548
MseI	TTAA	5 cut(s)	302, 561, 1151, 1784, 2166
MslI	CAYNNNNRTG	2 cut(s)	316, 2874
MspA1I	CMGCKG	4 cut(s)	261, 1481, 1541, 2658
MspI	CCGG	4 cut(s)	463, 2108, 2616, 3035
MspR9I	CCNGG	2 cut(s)	381, 1830
MunI	CAATTG	1 cut(s)	972
Mva1269I	GAATGC	2 cut(s)	445, 1105
MvaI	CCWGG	2 cut(s)	381, 1830
MvnI	CGCG	1 cut(s)	261
MwoI	GCNNNNNNNGC	2 cut(s)	1289, 2372
NdeI	CATATG	1 cut(s)	2977
NdeII	GATC	8 cut(s)	38, 182, 427, 579, 2011, 2788, 2881, 2889
NlaIII	CATG	8 cut(s)	368, 485, 1245, 2023, 2189, 2453, 2873, 2953
NlaIV	GGNNCC	5 cut(s)	1047, 2013, 2142, 2226, 3047
NmeAIII	GCCGAG	1 cut(s)	963
NsiI	ATGCAT	1 cut(s)	2191
NspI	RCATGY	2 cut(s)	2453, 2953
OliI	CACNNNNGTG	1 cut(s)	316
PaqCI	CACCTGC	1 cut(s)	565
PceI	AGGCCT	2 cut(s)	2296, 2713
PcsI	WCGNNNNNNNCGW	1 cut(s)	793
PctI	GAATGC	2 cut(s)	445, 1105
PdmI	GAANNNNTTC	5 cut(s)	133, 372, 743, 1263, 1548
Pfl23II	CGTACG	1 cut(s)	1085
PflFI	GACNNNGTC	1 cut(s)	2365
PinAI	ACCGGT	2 cut(s)	462, 2615
PkrI	GCNGC	7 cut(s)	263, 611, 1039, 2047, 2071, 2332, 2517
PleI	GAGTC	3 cut(s)	396, 1730, 2754
PpsI	GAGTC	3 cut(s)	396, 1730, 2754
PpuMI	RGGWCCY	1 cut(s)	2225
PshBI	ATTAAT	1 cut(s)	302
PsiI	TTATAA	1 cut(s)	621
Psp124BI	GAGCTC	2 cut(s)	258, 2390
Psp5II	RGGWCCY	1 cut(s)	2225
Psp6I	CCWGG	2 cut(s)	379, 1828
PspGI	CCWGG	2 cut(s)	379, 1828
PspLI	CGTACG	1 cut(s)	1085
PspN4I	GGNNCC	5 cut(s)	1047, 2013, 2142, 2226, 3047
PspPI	GGNCC	4 cut(s)	595, 769, 2225, 2613
PspPPI	RGGWCCY	1 cut(s)	2225
PsrI	GAACNNNNNNTAC	4 cut(s)	121, 153, 2124, 2156
PstI	CTGCAG	1 cut(s)	1630
PstNI	CAGNNNCTG	1 cut(s)	2749
PsuI	RGATCY	4 cut(s)	427, 2011, 2881, 2889
PsyI	GACNNNGTC	1 cut(s)	2365
PvuII	CAGCTG	2 cut(s)	1481, 1541
RsaI	GTAC	6 cut(s)	13, 1087, 2052, 2812, 2838, 2861
RsaNI	GTAC	6 cut(s)	12, 1086, 2051, 2811, 2837, 2860
RseI	CAYNNNNRTG	2 cut(s)	316, 2874
SacI	GAGCTC	2 cut(s)	258, 2390
SacII	CCGCGG	1 cut(s)	262
SaqAI	TTAA	5 cut(s)	302, 561, 1151, 1784, 2166
SatI	GCNGC	7 cut(s)	262, 610, 1038, 2046, 2070, 2331, 2516
Sau3AI	GATC	8 cut(s)	38, 182, 427, 579, 2011, 2788, 2881, 2889
Sau96I	GGNCC	4 cut(s)	595, 769, 2225, 2613
ScaI	AGTACT	2 cut(s)	13, 2861
SchI	GAGTC	3 cut(s)	397, 1730, 2755
ScrFI	CCNGG	2 cut(s)	381, 1830
SduI	GDGCHC	4 cut(s)	258, 1985, 2308, 2390
SfaNI	GCATC	7 cut(s)	1331, 1591, 1882, 1901, 2198, 2715, 3074
SfcI	CTRYAG	3 cut(s)	408, 1626, 3136
Sfr303I	CCGCGG	1 cut(s)	262
SgrBI	CCGCGG	1 cut(s)	262
SinI	GGWCC	4 cut(s)	595, 769, 2225, 2613
SmiMI	CAYNNNNRTG	2 cut(s)	316, 2874
SmlI	CTYRAG	1 cut(s)	567
SmoI	CTYRAG	1 cut(s)	567
SseBI	AGGCCT	2 cut(s)	2296, 2713
SsiI	CCGC	9 cut(s)	259, 261, 679, 2048, 2138, 2516, 2658, 2874, 2879
SspMI	CTAG	4 cut(s)	1638, 2229, 2895, 2904
SstI	GAGCTC	2 cut(s)	258, 2390
StuI	AGGCCT	2 cut(s)	2296, 2713
StyD4I	CCNGG	2 cut(s)	379, 1828
StyI	CCWWGG	1 cut(s)	2075
TaiI	ACGT	3 cut(s)	458, 1518, 1996
TaqI	TCGA	9 cut(s)	162, 419, 787, 846, 1739, 2360, 2495, 2624, 3155
TaqII	GACCGA	2 cut(s)	612, 2771
TatI	WGTACW	2 cut(s)	11, 2859
TauI	GCSGC	2 cut(s)	264, 2518
Tru1I	TTAA	5 cut(s)	302, 561, 1151, 1784, 2166
Tru9I	TTAA	5 cut(s)	302, 561, 1151, 1784, 2166
TscAI	CASTG	5 cut(s)	51, 1867, 2100, 2226, 2920
TseI	GCWGC	5 cut(s)	609, 1037, 2045, 2069, 2330
TspDTI	ATGAA	9 cut(s)	33, 381, 605, 1577, 1604, 2045, 2166, 2454, 3093
TspGWI	ACGGA	3 cut(s)	1183, 2076, 2520
TspRI	CASTG	5 cut(s)	51, 1867, 2100, 2226, 2920
Tth111I	GACNNNGTC	1 cut(s)	2365
VpaK11BI	GGWCC	4 cut(s)	595, 769, 2225, 2613
VspI	ATTAAT	1 cut(s)	302
XagI	CCTNNNNNAGG	1 cut(s)	1626
XapI	RAATTY	7 cut(s)	55, 230, 500, 669, 775, 1112, 3115
XceI	RCATGY	2 cut(s)	2453, 2953
XmiI	GTMKAC	2 cut(s)	1165, 2829
XmnI	GAANNNNTTC	5 cut(s)	133, 372, 743, 1263, 1548
XspI	CTAG	4 cut(s)	1638, 2229, 2895, 2904
ZrmI	AGTACT	2 cut(s)	13, 2861
Zsp2I	ATGCAT	1 cut(s)	2191

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.