pycom13g18140

MATH domain-containing protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Reverse (-)
14156346 .. 14168562
12217 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g18140.2

Sequence Viewer

Length: 1593 bp
ATGGGGACACCTTTACATTCGTTAAAAGAATTAAAATCTCAATACACCCCTAAATTAAAAAAAAAAGATTTTCTTTTTTCGGTTCCGCCTTTGCTCAATTCTATCTCTCTCCCAGCTGCGCCTTTCTTTTTCTTTCTTCCTCTCTCTAGAATCTCAGAGCTTCCGTTGGCCATTGTGAATAAGCTCTGGTCTTCGTTGCAGGGTTGGAGTGTGAGGACAGGAGTTTTGGAGTGGGAAATGGCCGGGATTTCTAGTGAAGAGTCTGGTGCAGGAAGGTCTACGGAGGGGATTTCAAGTGGGCAGCGTTGTCTCTCTGGGGAAGCCTTAGCAGAATGGCAGTCCTCTGAGCAGGTGGAAAATGGAACCCTATCTACTTCACCCCCTTATTGGGACTCTGATGATGACGATGATGGTGGGCCAAAGCCGTCTGAATTATATGGAAAGTTCACGTGGAAGATAGAGAAATTTTCTCAAATTAACAAAAGGGAACTTCGCAGTAATGCTTTTGAGGTTGGCGGCTACAAGTGGTACATCTTGATCGATCCCCAGGGTTGTGATGTTTGCAATCATCTCTCTTTGTTTCTTTGTGTAGCTAATCATGACAAACTTCTTTCAGGTTGGAGCCATTTTGCTCACTTTACTATAGCTGTGGTAAATAAAGATCCTAAGAAATCGAAATATTCTGATACATTACATCGCTTTTGGAAGAAAGAGCATGACTGGGGATGGAAAAAATTCATGGAGCTGTCAGAAGTATTAGATGGGTTTATTGATGCTGACACTCTTATAATAAAGGCGCAAGTCCAAGTCATCAGGGAGAAAGCAGACCGGCCCTTTCACTGCCTTGATTGTCAATATAGGAGAGAGCTTGTTAGGGTATACTTGACAAATGTAGAGCAAATTTGCGGTCGTTTTGTCGAAGAGAGAAGAAGCAAACTCGGAAAATTGATAGAGGATAAAGCTAAATGGTCAAGCTTCTGCTCCTTCTGGGTGGGAATTGAACAAAATGCCAGGCGCCGTATGTCCAGGGAGAAGATGGATGCAGTCCTGAAAGTAGTCGTTAAGCACTTTTTTATTGAGAAAGAAGTCACATCTACGTTGGTAATGGACTCATTGTATAGTGGTTTAAAGGCTCTTGAAGGTCAAACCAAGTCCAAGAAAAGTAAGGTGAAACTACTGGATGCTGAAGAAATGCCAGCACCAATTGTTCATGTAGAGAAAGATATGTTTGTATTGGTGGATGATGTTCTGATGCTACTTGAGAGGGCTGCCTTGGAACCATTACCTCCAAAAGATGAGAAGGGTCCTCAAAATCGTACAAAAGATGGAAATTCTGGAGAGGACTTCAACAAAGATTCTATTGAGCGGGATGAAAGACGTCTTACGGAATTGGGTCGTAGGACTGTAGAAATATTTGTCCTTGCTTATATTTTCAGCAATAAAATTGAAGTTGCCTATGATGAATCTGTTGCATTGAAGAGGCAAGAGGAACTCATCCGTGAGGAAGAAGCAGCATGGCAGGCTGAAAGTGAGCAGAAGGCAAGGCGAGGAGCTACTGTAAAGGAAAAGAAGTCCAAGAAAAAACAGGTTTGA

Protein Analysis

531

Amino Acids

60.77

Weight (kDa)

7.57

Isoelectric Point (pI)

46.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 788
AarI CACCTGC 1 cut(s) 340
AatII GACGTC 1 cut(s) 1381
Acc36I ACCTGC 1 cut(s) 340
AccB1I GGYRCC 1 cut(s) 1014
AccBSI CCGCTC 1 cut(s) 1366
AccI GTMKAC 2 cut(s) 278, 879
AciI CCGC 4 cut(s) 86, 516, 906, 1366
AclWI GGATC 2 cut(s) 536, 656
AcoI YGGCCR 2 cut(s) 168, 240
AcsI RAATTY 4 cut(s) 464, 734, 900, 1330
AcuI CTGAAG 1 cut(s) 1206
AcvI CACGTG 1 cut(s) 450
AcyI GRCGYC 2 cut(s) 1015, 1378
AfaI GTAC 2 cut(s) 530, 1318
AfiI CCNNNNNNNGG 2 cut(s) 387, 388
AgsI TTSAA 6 cut(s) 294, 1001, 1139, 1348, 1448, 1477
AjnI CCWGG 3 cut(s) 546, 1010, 1025
Alw26I GTCTC 1 cut(s) 314
AlwI GGATC 2 cut(s) 536, 656
AoxI GGCC 4 cut(s) 168, 240, 416, 830
ApeKI GCWGC 4 cut(s) 116, 301, 1268, 1511
ApoI RAATTY 4 cut(s) 464, 734, 900, 1330
ArsI GACNNNNNNTTYG 4 cut(s) 208, 240, 892, 924
Asp700I GAANNNNTTC 1 cut(s) 734
AspLEI GCGC 3 cut(s) 121, 799, 1017
AspS9I GGNCC 3 cut(s) 416, 831, 1304
AsuC2I CCSGG 1 cut(s) 244
AsuHPI GGTGA 2 cut(s) 369, 1180
AvaII GGWCC 1 cut(s) 1304
BalI TGGCCA 1 cut(s) 170
BanI GGYRCC 1 cut(s) 1014
BbrPI CACGTG 1 cut(s) 450
BbsI GAAGAC 1 cut(s) 183
BbvI GCAGC 4 cut(s) 103, 313, 1255, 1523
BccI CCATC 5 cut(s) 404, 720, 755, 1030, 1319
BceAI ACGGC 2 cut(s) 409, 1002
BciT130I CCWGG 3 cut(s) 548, 1012, 1027
BcnI CCSGG 1 cut(s) 244
BcoDI GTCTC 1 cut(s) 314
BfaI CTAG 2 cut(s) 147, 252
BfmI CTRYAG 2 cut(s) 642, 1404
BfoI RGCGCY 1 cut(s) 1018
BfuAI ACCTGC 1 cut(s) 340
BisI GCNGC 5 cut(s) 117, 302, 517, 1269, 1512
BlsI GCNGC 5 cut(s) 118, 303, 518, 1270, 1513
Bme1390I CCNGG 4 cut(s) 244, 548, 1012, 1027
Bme18I GGWCC 1 cut(s) 1304
BmgT120I GGNCC 3 cut(s) 416, 831, 1304
BmiI GGNNCC 6 cut(s) 84, 364, 623, 1016, 1278, 1305
BmrFI CCNGG 4 cut(s) 244, 548, 1012, 1027
BmrI ACTGGG 1 cut(s) 730
BmsI GCATC 4 cut(s) 763, 1030, 1171, 1242
BmuI ACTGGG 1 cut(s) 730
BpiI GAAGAC 1 cut(s) 183
BpmI CTGGAG 1 cut(s) 1356
Bpu10I CCTNAGC 1 cut(s) 325
BpuEI CTTGAG 1 cut(s) 1280
BpuMI CCSGG 1 cut(s) 244
Bsa29I ATCGAT 1 cut(s) 540
BsaAI YACGTR 1 cut(s) 450
BsaHI GRCGYC 2 cut(s) 1015, 1378
BsaJI CCNNGG 4 cut(s) 546, 547, 1026, 1272
BsaXI ACNNNNNCTCC 2 cut(s) 1542, 1572
Bsc4I CCNNNNNNNGG 2 cut(s) 387, 388
Bse118I RCCGGY 1 cut(s) 828
Bse1I ACTGG 2 cut(s) 725, 1182
BseBI CCWGG 3 cut(s) 548, 1012, 1027
BseCI ATCGAT 1 cut(s) 540
BseDI CCNNGG 4 cut(s) 546, 547, 1026, 1272
BseGI GGATG 6 cut(s) 731, 1045, 1186, 1246, 1375, 1494
BseLI CCNNNNNNNGG 2 cut(s) 387, 388
BseMII CTCAG 2 cut(s) 168, 336
BseNI ACTGG 2 cut(s) 725, 1182
BseRI GAGGAG 1 cut(s) 1563
BseXI GCAGC 4 cut(s) 103, 313, 1255, 1523
BseYI CCCAGC 1 cut(s) 112
BsgI GTGCAG 1 cut(s) 288
Bsh1285I CGRYCG 1 cut(s) 910
BshFI GGCC 4 cut(s) 170, 242, 418, 832
BshNI GGYRCC 1 cut(s) 1014
BshVI ATCGAT 1 cut(s) 540
BsiEI CGRYCG 1 cut(s) 910
BsiSI CCGG 2 cut(s) 243, 829
BslFI GGGAC 2 cut(s) 19, 404
BslI CCNNNNNNNGG 2 cut(s) 387, 388
BsmAI GTCTC 1 cut(s) 314
BsmFI GGGAC 2 cut(s) 19, 404
BsnI GGCC 4 cut(s) 170, 242, 418, 832
Bsp143I GATC 3 cut(s) 537, 541, 661
BspACI CCGC 4 cut(s) 86, 516, 906, 1366
BspANI GGCC 4 cut(s) 170, 242, 418, 832
BspCNI CTCAG 2 cut(s) 167, 337
BspDI ATCGAT 1 cut(s) 540
BspHI TCATGA 1 cut(s) 598
BspLI GGNNCC 6 cut(s) 84, 364, 623, 1016, 1278, 1305
BspMI ACCTGC 1 cut(s) 340
BspPI GGATC 2 cut(s) 536, 656
BspT107I GGYRCC 1 cut(s) 1014
BsrBI CCGCTC 1 cut(s) 1366
BsrFI RCCGGY 1 cut(s) 828
BsrI ACTGG 2 cut(s) 725, 1182
BssAI RCCGGY 1 cut(s) 828
BssECI CCNNGG 4 cut(s) 546, 547, 1026, 1272
BssMI GATC 3 cut(s) 537, 541, 661
BssNAI GTATAC 1 cut(s) 880
BssNI GRCGYC 2 cut(s) 1015, 1378
BssT1I CCWWGG 1 cut(s) 1272
Bst1107I GTATAC 1 cut(s) 880
Bst2UI CCWGG 3 cut(s) 548, 1012, 1027
Bst4CI ACNGT 2 cut(s) 1405, 1558
Bst6I CTCTTC 3 cut(s) 252, 915, 1472
BstACI GRCGYC 2 cut(s) 1015, 1378
BstBAI YACGTR 1 cut(s) 450
BstC8I GCNNGC 2 cut(s) 1197, 1521
BstDEI CTNAG 4 cut(s) 154, 325, 345, 666
BstF5I GGATG 6 cut(s) 731, 1045, 1186, 1246, 1375, 1494
BstH2I RGCGCY 1 cut(s) 1018
BstHHI GCGC 3 cut(s) 121, 799, 1017
BstKTI GATC 3 cut(s) 540, 544, 664
BstMAI GTCTC 1 cut(s) 314
BstMBI GATC 3 cut(s) 537, 541, 661
BstMCI CGRYCG 1 cut(s) 910
BstMWI GCNNNNNNNGC 1 cut(s) 1520
BstNI CCWGG 3 cut(s) 548, 1012, 1027
BstSCI CCNGG 4 cut(s) 242, 546, 1010, 1025
BstSFI CTRYAG 2 cut(s) 642, 1404
BstV1I GCAGC 4 cut(s) 103, 313, 1255, 1523
BstV2I GAAGAC 1 cut(s) 183
BstX2I RGATCY 1 cut(s) 661
BstYI RGATCY 1 cut(s) 661
BstZ17I GTATAC 1 cut(s) 880
Bsu15I ATCGAT 1 cut(s) 540
BsuRI GGCC 4 cut(s) 170, 242, 418, 832
BsuTUI ATCGAT 1 cut(s) 540
BtgZI GCGATG 1 cut(s) 680
BtsCI GGATG 6 cut(s) 731, 1045, 1186, 1246, 1375, 1494
BtsI GCAGTG 1 cut(s) 838
BtsIMutI CAGTG 1 cut(s) 838
BveI ACCTGC 1 cut(s) 340
Cac8I GCNNGC 2 cut(s) 1197, 1521
CciI TCATGA 1 cut(s) 598
CfoI GCGC 3 cut(s) 121, 799, 1017
Cfr10I RCCGGY 1 cut(s) 828
Cfr13I GGNCC 3 cut(s) 416, 831, 1304
ClaI ATCGAT 1 cut(s) 540
Csp6I GTAC 2 cut(s) 529, 1317
CviAII CATG 5 cut(s) 599, 716, 739, 1211, 1515
CviQI GTAC 2 cut(s) 529, 1317
DdeI CTNAG 4 cut(s) 154, 325, 345, 666
DinI GGCGCC 1 cut(s) 1016
DpnI GATC 3 cut(s) 539, 543, 663
DpnII GATC 3 cut(s) 537, 541, 661
DraI TTTAAA 1 cut(s) 1128
EaeI YGGCCR 2 cut(s) 168, 240
Eam1104I CTCTTC 3 cut(s) 252, 915, 1472
EarI CTCTTC 3 cut(s) 252, 915, 1472
EciI GGCGGA 1 cut(s) 75
Eco130I CCWWGG 1 cut(s) 1272
Eco47I GGWCC 1 cut(s) 1304
Eco57I CTGAAG 1 cut(s) 1206
Eco72I CACGTG 1 cut(s) 450
EcoO109I RGGNCCY 1 cut(s) 1304
EcoRII CCWGG 3 cut(s) 546, 1010, 1025
EcoT14I CCWWGG 1 cut(s) 1272
EgeI GGCGCC 1 cut(s) 1016
EheI GGCGCC 1 cut(s) 1016
ErhI CCWWGG 1 cut(s) 1272
FaeI CATG 5 cut(s) 602, 719, 742, 1214, 1518
FalI AAGNNNNNCTT 2 cut(s) 57, 89
FaqI GGGAC 2 cut(s) 19, 404
FatI CATG 5 cut(s) 598, 715, 738, 1210, 1514
FauI CCCGC 1 cut(s) 1359
FblI GTMKAC 2 cut(s) 278, 879
Fnu4HI GCNGC 5 cut(s) 117, 302, 517, 1269, 1512
FokI GGATG 6 cut(s) 738, 1052, 1193, 1253, 1382, 1481
Fsp4HI GCNGC 5 cut(s) 117, 302, 517, 1269, 1512
FspBI CTAG 2 cut(s) 147, 252
GlaI GCGC 3 cut(s) 120, 798, 1016
GluI GCNGC 5 cut(s) 117, 302, 517, 1269, 1512
GsaI CCCAGC 1 cut(s) 116
GsuI CTGGAG 1 cut(s) 1356
HaeII RGCGCY 1 cut(s) 1018
HaeIII GGCC 4 cut(s) 170, 242, 418, 832
HapII CCGG 2 cut(s) 243, 829
HhaI GCGC 3 cut(s) 121, 799, 1017
Hin1I GRCGYC 2 cut(s) 1015, 1378
Hin1II CATG 5 cut(s) 602, 719, 742, 1214, 1518
Hin6I GCGC 3 cut(s) 119, 797, 1015
HinP1I GCGC 3 cut(s) 119, 797, 1015
HindIII AAGCTT 1 cut(s) 973
HinfI GANTC 6 cut(s) 150, 260, 392, 1109, 1355, 1463
HpaII CCGG 2 cut(s) 243, 829
HphI GGTGA 2 cut(s) 369, 1180
Hpy166II GTNNAC 3 cut(s) 279, 447, 880
Hpy188I TCNGA 8 cut(s) 157, 346, 397, 430, 685, 751, 941, 1251
Hpy188III TCNNGA 6 cut(s) 147, 535, 599, 1048, 1136, 1335
Hpy8I GTNNAC 3 cut(s) 279, 447, 880
HpyAV CCTTC 5 cut(s) 267, 994, 1133, 1294, 1531
HpyCH4III ACNGT 2 cut(s) 1405, 1558
HpyCH4IV ACGT 3 cut(s) 449, 1097, 1378
HpyCH4V TGCA 5 cut(s) 199, 269, 564, 1043, 1472
HpyF10VI GCNNNNNNNGC 1 cut(s) 1520
HpyF3I CTNAG 4 cut(s) 154, 325, 345, 666
HpySE526I ACGT 3 cut(s) 449, 1097, 1378
Hsp92I GRCGYC 2 cut(s) 1015, 1378
Hsp92II CATG 5 cut(s) 602, 719, 742, 1214, 1518
HspAI GCGC 3 cut(s) 119, 797, 1015
KasI GGCGCC 1 cut(s) 1014
Kzo9I GATC 3 cut(s) 537, 541, 661
LmnI GCTCC 4 cut(s) 621, 742, 986, 1550
Lsp1109I GCAGC 4 cut(s) 103, 313, 1255, 1523
LweI GCATC 4 cut(s) 763, 1030, 1171, 1242
MaeI CTAG 2 cut(s) 147, 252
MaeII ACGT 3 cut(s) 449, 1097, 1378
MaeIII GTNAC 1 cut(s) 1087
MalI GATC 3 cut(s) 539, 543, 663
MbiI CCGCTC 1 cut(s) 1366
MboI GATC 3 cut(s) 537, 541, 661
MfeI CAATTG 1 cut(s) 1203
MflI RGATCY 1 cut(s) 661
MlsI TGGCCA 1 cut(s) 170
MluNI TGGCCA 1 cut(s) 170
Mly113I GGCGCC 1 cut(s) 1015
MlyI GAGTC 3 cut(s) 269, 386, 1103
MmeI TCCRAC 2 cut(s) 185, 599
Mox20I TGGCCA 1 cut(s) 170
MroXI GAANNNNTTC 1 cut(s) 734
MscI TGGCCA 1 cut(s) 170
MseI TTAA 6 cut(s) 23, 32, 56, 477, 1062, 1127
Msp20I TGGCCA 1 cut(s) 170
MspA1I CMGCKG 1 cut(s) 116
MspI CCGG 2 cut(s) 243, 829
MspR9I CCNGG 4 cut(s) 244, 548, 1012, 1027
MunI CAATTG 1 cut(s) 1203
MvaI CCWGG 3 cut(s) 548, 1012, 1027
MwoI GCNNNNNNNGC 1 cut(s) 1520
NarI GGCGCC 1 cut(s) 1015
NciI CCSGG 1 cut(s) 244
NdeII GATC 3 cut(s) 537, 541, 661
NlaIII CATG 5 cut(s) 602, 719, 742, 1214, 1518
NlaIV GGNNCC 6 cut(s) 84, 364, 623, 1016, 1278, 1305
NmuCI GTSAC 1 cut(s) 1087
PagI TCATGA 1 cut(s) 598
PaqCI CACCTGC 1 cut(s) 340
PasI CCCWGGG 1 cut(s) 547
PdmI GAANNNNTTC 1 cut(s) 734
PfeI GAWTC 3 cut(s) 150, 1355, 1463
PkrI GCNGC 5 cut(s) 118, 303, 518, 1270, 1513
PleI GAGTC 3 cut(s) 268, 386, 1103
PluTI GGCGCC 1 cut(s) 1018
PmaCI CACGTG 1 cut(s) 450
PmlI CACGTG 1 cut(s) 450
PpsI GAGTC 3 cut(s) 268, 386, 1103
Ppu21I YACGTR 1 cut(s) 450
PpuMI RGGWCCY 1 cut(s) 1304
PsiI TTATAA 1 cut(s) 788
Psp5II RGGWCCY 1 cut(s) 1304
Psp6I CCWGG 3 cut(s) 546, 1010, 1025
PspCI CACGTG 1 cut(s) 450
PspFI CCCAGC 1 cut(s) 112
PspGI CCWGG 3 cut(s) 546, 1010, 1025
PspN4I GGNNCC 6 cut(s) 84, 364, 623, 1016, 1278, 1305
PspPI GGNCC 3 cut(s) 416, 831, 1304
PspPPI RGGWCCY 1 cut(s) 1304
PsrI GAACNNNNNNTAC 2 cut(s) 355, 387
PsuI RGATCY 1 cut(s) 661
PvuII CAGCTG 1 cut(s) 116
RsaI GTAC 2 cut(s) 530, 1318
RsaNI GTAC 2 cut(s) 529, 1317
SaqAI TTAA 6 cut(s) 23, 32, 56, 477, 1062, 1127
SatI GCNGC 5 cut(s) 117, 302, 517, 1269, 1512
Sau3AI GATC 3 cut(s) 537, 541, 661
Sau96I GGNCC 3 cut(s) 416, 831, 1304
SchI GAGTC 3 cut(s) 269, 386, 1103
ScrFI CCNGG 4 cut(s) 244, 548, 1012, 1027
SfaNI GCATC 4 cut(s) 763, 1030, 1171, 1242
SfcI CTRYAG 2 cut(s) 642, 1404
SfoI GGCGCC 1 cut(s) 1016
SinI GGWCC 1 cut(s) 1304
SmlI CTYRAG 1 cut(s) 1259
SmoI CTYRAG 1 cut(s) 1259
SsiI CCGC 4 cut(s) 86, 516, 906, 1366
SspDI GGCGCC 1 cut(s) 1014
SspI AATATT 2 cut(s) 680, 1413
SspMI CTAG 2 cut(s) 147, 252
StyD4I CCNGG 4 cut(s) 242, 546, 1010, 1025
StyI CCWWGG 1 cut(s) 1272
TaaI ACNGT 2 cut(s) 1405, 1558
TaiI ACGT 3 cut(s) 452, 1100, 1381
TaqI TCGA 3 cut(s) 540, 674, 918
TauI GCSGC 1 cut(s) 519
TfiI GAWTC 3 cut(s) 150, 1355, 1463
Tru1I TTAA 6 cut(s) 23, 32, 56, 477, 1062, 1127
Tru9I TTAA 6 cut(s) 23, 32, 56, 477, 1062, 1127
TscAI CASTG 1 cut(s) 845
TseFI GTSAC 1 cut(s) 1087
TseI GCWGC 4 cut(s) 116, 301, 1268, 1511
Tsp45I GTSAC 1 cut(s) 1087
TspDTI ATGAA 4 cut(s) 727, 1199, 1386, 1476
TspGWI ACGGA 4 cut(s) 153, 296, 1400, 1487
TspRI CASTG 1 cut(s) 845
VpaK11BI GGWCC 1 cut(s) 1304
XapI RAATTY 4 cut(s) 464, 734, 900, 1330
XbaI TCTAGA 1 cut(s) 146
XcmI CCANNNNNNNNNTGG 1 cut(s) 1033
XmiI GTMKAC 2 cut(s) 278, 879
XmnI GAANNNNTTC 1 cut(s) 734
XspI CTAG 2 cut(s) 147, 252
ZraI GACGTC 1 cut(s) 1379
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.