Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0004094

Physical Location & Seq

Genomic Coordinates Reverse (-)

14110974 .. 14124970

Gene Structure 13997 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g18110.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3423 bp

ATGGCCGGGATTTCTAGTGAAGAGTCCGGTGCAGGAAGGTCTACGGAGGGGATTTCAAGTGGGCAGCGTTGTCTCTCTGGGGAAGCCTTAGCCGAATGGCGGTCCTCTGAGCAGGTGGAAAATGGAACCCCATCTACTTCGCCCCCTTATTGGGACTCTGATGACGACGATGATGGTGGGCCAAAGCCGTCTGAATTATATGGAAAGTTCACGTGGAAGATAGAGAAATTTTCTCAAATTAACAAAAGGGAACTTCGCAGTAATGCTTTTGAGGTTGGCGGCTACAAGTGGTACATCTTGATCGATCCCCAGGGTTGTGATGTTTGCAATCATCTCTCTTTGTTTCTTTGTGTAGCTAATCATGACAAACTTCTTCCAGGTTGGAGCCATTTTGCTCAGTTTACTATAGCTGTGGTAAATAAAGATCCTAAGAAATCGAAATATTCTGATACATTACATCGCTTTTGGAAGAAAGAGCATGACTGGGGATGGAAAAAATTCATGGAGCAGTCAAAAGTATTAGATGGGTTTATTGATGCTGACACTCTTATAATAAAGGCGCAAGTCCAAGTCATCAGGGAGAAAGCAGACCGGCCCTTTCGCTGCCTTGATTGTCAATATAGGAGAGAGCTTGTTAGGGTATACTTGACAAATGTAGAGCAAATTTGCCGTCGTTTTGTCGAAGAGAGAAGAAGCAAACTCGGAAAATTGATAGAGGATAAAGCTAAATGGTCAAGCTTCTGCTCCTTCTGGGTGGGAATTGAACAAAATGCCAGGCGCCGTATGTCCAGGGAGAAGATGGATGCAGTCCTGAAAGTAGTCGTTAAGCACTTTTTTATTGAGAAAGAAGTCACATCTACATTGGTAATGGACTCATTGTATAGTGGTTTAAAGGCTCTTGAAGGTCAAACCAAGTCCAAGAAAAGTAAGGTGAAACTATTGGATGCTGAAGAAATGCCAGCACCAATTGTTCATGTAGAGAAAGATATGTTTGTATTGGTGGATGATGTTCTGATGCTACTTGAGAGGGCTGCCTTGGAACCATTACCTCCAAAAGATGAGAAGGGTCCTCAAAATCGTACAAAAGATGGAAATTCTGGAGAGGACTTCAACAAAGATTCTGTTGAGCGGGATGAAAGACGTCTTACGGAATTGGGTCGTAGGACTGTAGAAATATTTGTCCTTGCTCATATTTTCAGCAATAAAATTGAAGTTGCCTATCATGAATCTGTTGCATTGAAGAGGCAAGAGGAACTCATCCGTGAGGAAGAAGCAGCATGGCAGGCTGAAAGTGAGCAGAAGGCAAAGCGAGGAGCTACTGAAAAGGAAAAGAAGTCCAAGAAAAAACAGGCTAAACAGAGAAAGAACAACCGGAAGGGTAAGGACAAAGGGAGGGAGGAAAGGCCCGATGTAGAAGCACAAGAGAAACAAGAAGAAGATCCGCCACCTACTGAAGAAATGATAGACTACACACCGGATGAAGAAGAACCTGTACTCGAAAAGCTGGATACAGTGGAAGATGTATCTGACATGTCTGATTCAGTGGATGGTGTTGCTGAAGCACCTCCGCTTGATTCTGAAGACAGAGATGCTAGTCCAATAAATTGGGATACTGACACATCAGAAGTCCATCCTCCCACAGAAGCCAGTAGCAGTGGGATTAGTGGACTGTCATCTGTGCAAAATGGGGTATCTGAAAGAAAGAGCCCATCTATGATGGACGATAGTTCCTCAACTTGTTCTACAGATTCTGTCCCATCAGTGGTAATGAATGGGCCATATAAGGGGAACTCATTTTCTAGCTACAAAAACCAGAAATCACCTAGCAGGGGGAAACACCAACGCACTAAGGCAACAAGTGATGGGAATAGTTGGCCAAATGAGACGGATAGTCAGCCTTCTGCACCTGTAGCGGATGCAGGTTATCAGAATGATGTTTCTAGAAGTAGTAGTAAGGCGGGTGAATCTGAGTCAGAGCCTGCTGCTCACTCATTGCAGGATCGGAATAAATGGCTGGAGCAGCATGTTGTTAAGGTGGAGGAAGAAGTTGTATCCCTGCAGAAAAAATTGAGTATCAAAGATGAGGTTGATCTAGAAAGGCCTTTGAAAGACAAGACACCAGCAGTAACATCCTCTCCTGGAAGCCCTCCTAAAGATGTGCCCCTGTATGGTCAGCCGAAGTCAGAGAGCCAGAGTAGTCCGGTTGTAGAATCTAGTCCACTCAGAAAAGGATCCTCCAGTGGAGCTCAACAGACTGAGAGAGTGGTACCTTTGACAACTTCACCGCAGAATAATGGCATGTCCAAACCTCAAAATCAGAATGCTACAACTCCAACGCCAGCTGAAAAAGCCATGGCACATCAAATGCCTGTGATGTCTAGGCCTTCCAGTGCTCCTCTTGTTCCTGGTCTGAGGCCTACTTCTACTGTTGTGCCTACAGTTCAAGCTCAAACTGCTCCTCAGCTTGCCCGTTCAGTAAGTGCAGCTGGCCGGTTGGGTCCTGACCCATCACCAGCAACTCATAGTTATGCTCCCCAGTCCTATAGAAACGCCATACTGGGTAACCATGTTGCTTCAGGTTCAACTGGTCTCACACATACTAACTCTCCAAGTTCAGGCGTGAGCCCATCCCCAGTATACTCTCACTCGCTGGCCTTGGTATCTGCCCCAATGTTCTTACCTAAGAGCTCTGAAATGATGGACCCAAGCACACTTAAGTCAGGCTTCCCATTTGGAATGGTAACTCGGGATGTGTTGCATAATGGACCCCAGTGGATGGATAGTTCTCAAAGGGAATCGAGCAAAGGCATGAACTATGATCCTTCCTCCCTGCTTAATGATCAAAATTTTGACTACTTCCATCCTTTACAAGGTTGGCAAAGGGAACACTTGGCCACTGAGTTCCCAGCCTGTACATCCGGGCGCCATACCCAAGGTGTATCGGCTGATGAGTTCCCACACCTTGACATCATCAATGATCTGCTTGATGATGAACATGGCTTTGGTGCAGCTAGAGGAAGCCCTGTATTCCACTCCTTGGGTAACGGGCCAGGCCACTTAAGTCGGCAATTTTCTTACCCTGGTGATTTGGGCATATCTAACGACATGGGTTCTGCAACCAGCTCTTGTAGGTTTGAGAGAACACGGAGTTACCAAGATGACGGGTTCCAGAGGGGCTACACATTAGGGGGCCACTTCGAACCACTTAGGGAATTTACTCCACAAGCTGGTCCGCTGCCTTATGTGAATGGGCAGATTGATGGGTTAGTTCCTAACCAGTGGGCAATGGCTGGTTCTGATCTATCGCAGCTTGGCATGAGGAACACAGAACCTGATGGTTACCCATACTACAATCCAGAATATTCGAATATGGCATGTGGGGTGAATGGTTACACTGTATTCCGGCCTGCAAATGGTCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006914 GO:0006950 GO:0006952 GO:0006955 GO:0006996 GO:0007033 GO:0008150 GO:0008152 GO:0009056 GO:0009987 GO:0016020 GO:0016043 GO:0016236 GO:0044237 GO:0044248 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0050896 GO:0061919 GO:0071840 GO:0071944 GO:1905037

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MATH

Protein Analysis

1141

Amino Acids

126.3

Weight (kDa)

5.6

Isoelectric Point (pI)

56.49

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004094)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04300 AT1G04300 AT1G04300 AT1G04300 AT1G04300 AT1G04300 AT5G43560 AT5G43560 AT5G52330 AT5G52330 AT5G52330 AT5G52330
fragaria_vesca	FvH4_4g02970 FvH4_4g02970
malus_domestica	MD13G1209100.v1.1 MD16G1211000.v1.1
prunus_persica	Prupe.1G033200_v2.0.a1 Prupe.1G033200_v2.0.a1
pyrus_communis	pycom13g18110 pycom13g18140 pycom16g17710
rosa_chinensis	RchiOBHm_Chr4g0391041
rosa_laevigata	RLG00000009900
rosa_multiflora	Rmu_sc0001824.1_g000032
rosa_roxburghii	Rroxscaffold_5G00336880
rosa_rugosa	Rorug03G0333900 Rorug03G0333900 Rorug03G0334000
rosa_samantha	Rh4AG034400 Rh4BG029300 Rh4CG038100 Rh4DG031700
rosa_wichuraiana	Rw4G002680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	551
AarI	CACCTGC	1 cut(s)	103
AatII	GACGTC	1 cut(s)	1144
Acc36I	ACCTGC	2 cut(s)	103, 1910
Acc65I	GGTACC	1 cut(s)	2266
AccB1I	GGYRCC	3 cut(s)	777, 2266, 2922
AccB7I	CCANNNNNTGG	3 cut(s)	2776, 3037, 3227
AccBSI	CCGCTC	1 cut(s)	1129
AccI	GTMKAC	3 cut(s)	41, 642, 2637
AciI	CCGC	9 cut(s)	100, 279, 1129, 1442, 1568, 1913, 1958, 2285, 3233
AclWI	GGATC	7 cut(s)	299, 419, 1433, 2007, 2226, 2239, 2813
AcoI	YGGCCR	4 cut(s)	3, 1874, 2488, 2892
AcsI	RAATTY	6 cut(s)	227, 497, 663, 1093, 2845, 3212
AcuI	CTGAAG	5 cut(s)	969, 1473, 1578, 1599, 2559
AcvI	CACGTG	1 cut(s)	213
AcyI	GRCGYC	3 cut(s)	778, 1141, 2923
AfaI	GTAC	5 cut(s)	293, 1081, 1494, 2268, 2914
AflII	CTTAAG	2 cut(s)	2714, 3058
AflIII	ACRYGT	1 cut(s)	1530
AgsI	TTSAA	9 cut(s)	57, 764, 902, 1111, 1211, 1240, 2107, 2444, 2583
AhdI	GACNNNNNGTC	1 cut(s)	1890
AjnI	CCWGG	8 cut(s)	309, 376, 773, 788, 2137, 2404, 3049, 3079
AjuI	GAANNNNNNNTTGG	2 cut(s)	2985, 3017
AloI	GAACNNNNNNTCC	2 cut(s)	2767, 2799
Alw21I	GWGCWC	3 cut(s)	2248, 2395, 2690
Alw26I	GTCTC	3 cut(s)	77, 1877, 2594
AlwI	GGATC	7 cut(s)	299, 419, 1433, 2007, 2226, 2239, 2813
AlwNI	CAGNNNCTG	3 cut(s)	1751, 1979, 3332
Ama87I	CYCGRG	1 cut(s)	2745
ApoI	RAATTY	6 cut(s)	227, 497, 663, 1093, 2845, 3212
ArsI	GACNNNNNNTTYG	2 cut(s)	655, 687
Asp700I	GAANNNNTTC	1 cut(s)	497
Asp718I	GGTACC	1 cut(s)	2266
AspLEI	GCGC	3 cut(s)	562, 780, 2925
AsuC2I	CCSGG	2 cut(s)	7, 2920
AsuHPI	GGTGA	7 cut(s)	943, 1812, 1973, 2274, 2502, 3095, 3394
AsuII	TTCGAA	2 cut(s)	3198, 3365
AvaI	CYCGRG	1 cut(s)	2745
AvaII	GGWCC	6 cut(s)	102, 1067, 2498, 2701, 2765, 3230
BaeGI	GKGCMC	1 cut(s)	2163
BalI	TGGCCA	2 cut(s)	1876, 2894
BamHI	GGATCC	1 cut(s)	2231
BanI	GGYRCC	3 cut(s)	777, 2266, 2922
BanII	GRGCYC	4 cut(s)	1709, 2248, 2627, 2690
BarI	GAAGNNNNNNTAC	2 cut(s)	1476, 1508
BbrPI	CACGTG	1 cut(s)	213
BbsI	GAAGAC	1 cut(s)	1587
Bbv12I	GWGCWC	3 cut(s)	2248, 2395, 2690
BbvCI	CCTCAGC	1 cut(s)	2460
BceAI	ACGGC	3 cut(s)	172, 654, 765
BciT130I	CCWGG	8 cut(s)	311, 378, 775, 790, 2139, 2406, 3051, 3081
BciVI	GTATCC	3 cut(s)	1501, 1603, 2062
BclI	TGATCA	1 cut(s)	2839
BcnI	CCSGG	2 cut(s)	7, 2920
BcoDI	GTCTC	3 cut(s)	77, 1877, 2594
BfaI	CTAG	9 cut(s)	15, 1593, 1800, 1824, 1941, 2093, 2214, 2379, 3012
BfmI	CTRYAG	7 cut(s)	405, 1167, 1743, 1908, 2057, 2436, 2542
BfoI	RGCGCY	2 cut(s)	781, 2926
BfrI	CTTAAG	2 cut(s)	2714, 3058
BfuAI	ACCTGC	2 cut(s)	103, 1910
BfuI	GTATCC	3 cut(s)	1501, 1603, 2062
Bme18I	GGWCC	6 cut(s)	102, 1067, 2498, 2701, 2765, 3230
BmeRI	GACNNNNNGTC	1 cut(s)	1890
BmeT110I	CYCGRG	1 cut(s)	2745
BmrI	ACTGGG	5 cut(s)	493, 2530, 2567, 2627, 2764
BmsI	GCATC	6 cut(s)	526, 793, 934, 1005, 1579, 1906
BmuI	ACTGGG	5 cut(s)	493, 2530, 2567, 2627, 2764
BpiI	GAAGAC	1 cut(s)	1587
BpmI	CTGGAG	3 cut(s)	1119, 2036, 2221
Bpu10I	CCTNAGC	2 cut(s)	88, 2460
Bpu14I	TTCGAA	2 cut(s)	3198, 3365
BpuEI	CTTGAG	1 cut(s)	1043
BpuMI	CCSGG	2 cut(s)	7, 2920
Bsa29I	ATCGAT	1 cut(s)	303
BsaAI	YACGTR	1 cut(s)	213
BsaHI	GRCGYC	3 cut(s)	778, 1141, 2923
BsaI	GGTCTC	1 cut(s)	2594
BsaJI	CCNNGG	9 cut(s)	309, 310, 789, 1035, 2352, 2655, 2932, 3036, 3079
BsaWI	WCCGGW	4 cut(s)	26, 1371, 1474, 2200
BsaXI	ACNNNNNCTCC	4 cut(s)	2119, 2149, 2590, 2620
Bse118I	RCCGGY	2 cut(s)	591, 2490
Bse3DI	GCAATG	2 cut(s)	1991, 3291
BseBI	CCWGG	8 cut(s)	311, 378, 775, 790, 2139, 2406, 3051, 3081
BseCI	ATCGAT	1 cut(s)	303
BseDI	CCNNGG	9 cut(s)	309, 310, 789, 1035, 2352, 2655, 2932, 3036, 3079
BseMI	GCAATG	2 cut(s)	1991, 3291
BseMII	CTCAG	8 cut(s)	99, 410, 1959, 2236, 2247, 2402, 2474, 2889
BseRI	GAGGAG	3 cut(s)	1326, 2385, 2448
BseSI	GKGCMC	1 cut(s)	2163
BseYI	CCCAGC	1 cut(s)	2905
BsgI	GTGCAG	4 cut(s)	51, 1887, 2502, 3027
BshNI	GGYRCC	3 cut(s)	777, 2266, 2922
BshVI	ATCGAT	1 cut(s)	303
BsiHKAI	GWGCWC	3 cut(s)	2248, 2395, 2690
BsiHKCI	CYCGRG	1 cut(s)	2745
BsiSI	CCGG	9 cut(s)	6, 27, 592, 1372, 1475, 2201, 2491, 2919, 3403
BslFI	GGGAC	2 cut(s)	167, 1739
BsmAI	GTCTC	3 cut(s)	77, 1877, 2594
BsmBI	CGTCTC	1 cut(s)	1877
BsmFI	GGGAC	2 cut(s)	167, 1739
BsmI	GAATGC	1 cut(s)	2326
Bso31I	GGTCTC	1 cut(s)	2594
BsoBI	CYCGRG	1 cut(s)	2745
Bsp119I	TTCGAA	2 cut(s)	3198, 3365
Bsp1286I	GDGCHC	6 cut(s)	1709, 2163, 2248, 2395, 2627, 2690
Bsp1407I	TGTACA	1 cut(s)	2912
Bsp19I	CCATGG	1 cut(s)	2352
BspACI	CCGC	9 cut(s)	100, 279, 1129, 1442, 1568, 1913, 1958, 2285, 3233
BspCNI	CTCAG	8 cut(s)	100, 409, 1960, 2235, 2248, 2403, 2473, 2890
BspDI	ATCGAT	1 cut(s)	303
BspHI	TCATGA	2 cut(s)	361, 1222
BspMAI	CTGCAG	1 cut(s)	2061
BspMI	ACCTGC	2 cut(s)	103, 1910
BspPI	GGATC	7 cut(s)	299, 419, 1433, 2007, 2226, 2239, 2813
BspT104I	TTCGAA	2 cut(s)	3198, 3365
BspT107I	GGYRCC	3 cut(s)	777, 2266, 2922
BspTI	CTTAAG	2 cut(s)	2714, 3058
BspTNI	GGTCTC	1 cut(s)	2594
BsrBI	CCGCTC	1 cut(s)	1129
BsrDI	GCAATG	2 cut(s)	1991, 3291
BsrFI	RCCGGY	2 cut(s)	591, 2490
BsrGI	TGTACA	1 cut(s)	2912
BssAI	RCCGGY	2 cut(s)	591, 2490
BssECI	CCNNGG	9 cut(s)	309, 310, 789, 1035, 2352, 2655, 2932, 3036, 3079
BssNAI	GTATAC	2 cut(s)	643, 2638
BssNI	GRCGYC	3 cut(s)	778, 1141, 2923
BssT1I	CCWWGG	5 cut(s)	1035, 2352, 2655, 2932, 3036
Bst1107I	GTATAC	2 cut(s)	643, 2638
Bst2UI	CCWGG	8 cut(s)	311, 378, 775, 790, 2139, 2406, 3051, 3081
Bst4CI	ACNGT	6 cut(s)	1168, 1513, 1671, 2428, 2440, 3397
Bst6I	CTCTTC	3 cut(s)	15, 678, 1235
BstACI	GRCGYC	3 cut(s)	778, 1141, 2923
BstAFI	CTTAAG	2 cut(s)	2714, 3058
BstAUI	TGTACA	1 cut(s)	2912
BstBAI	YACGTR	1 cut(s)	213
BstBI	TTCGAA	2 cut(s)	3198, 3365
BstC8I	GCNNGC	8 cut(s)	960, 1284, 1980, 2340, 2466, 2488, 2652, 3408
BstDSI	CCRYGG	1 cut(s)	2352
BstEII	GGTNACC	2 cut(s)	2561, 3338
BstENI	CCTNNNNNAGG	1 cut(s)	2868
BstH2I	RGCGCY	2 cut(s)	781, 2926
BstHHI	GCGC	3 cut(s)	562, 780, 2925
BstMAI	GTCTC	3 cut(s)	77, 1877, 2594
BstMWI	GCNNNNNNNGC	5 cut(s)	1283, 1910, 2020, 2348, 2453
BstNI	CCWGG	8 cut(s)	311, 378, 775, 790, 2139, 2406, 3051, 3081
BstNSI	RCATGY	4 cut(s)	1534, 2027, 2302, 3378
BstPI	GGTNACC	2 cut(s)	2561, 3338
BstSFI	CTRYAG	7 cut(s)	405, 1167, 1743, 1908, 2057, 2436, 2542
BstSLI	GKGCMC	1 cut(s)	2163
BstV2I	GAAGAC	1 cut(s)	1587
BstX2I	RGATCY	3 cut(s)	424, 1438, 2231
BstXI	CCANNNNNNTGG	1 cut(s)	1605
BstYI	RGATCY	3 cut(s)	424, 1438, 2231
BstZ17I	GTATAC	2 cut(s)	643, 2638
Bsu15I	ATCGAT	1 cut(s)	303
BsuI	GTATCC	3 cut(s)	1501, 1603, 2062
BsuTUI	ATCGAT	1 cut(s)	303
BtgI	CCRYGG	1 cut(s)	2352
BtgZI	GCGATG	1 cut(s)	443
BtsI	GCAGTG	1 cut(s)	1660
BveI	ACCTGC	2 cut(s)	103, 1910
Cac8I	GCNNGC	8 cut(s)	960, 1284, 1980, 2340, 2466, 2488, 2652, 3408
CaiI	CAGNNNCTG	3 cut(s)	1751, 1979, 3332
CciI	TCATGA	2 cut(s)	361, 1222
CfoI	GCGC	3 cut(s)	562, 780, 2925
Cfr10I	RCCGGY	2 cut(s)	591, 2490
ClaI	ATCGAT	1 cut(s)	303
Csp6I	GTAC	5 cut(s)	292, 1080, 1493, 2267, 2913
CviQI	GTAC	5 cut(s)	292, 1080, 1493, 2267, 2913
DinI	GGCGCC	2 cut(s)	779, 2924
DraI	TTTAAA	1 cut(s)	891
DriI	GACNNNNNGTC	1 cut(s)	1890
EaeI	YGGCCR	4 cut(s)	3, 1874, 2488, 2892
Eam1104I	CTCTTC	3 cut(s)	15, 678, 1235
Eam1105I	GACNNNNNGTC	1 cut(s)	1890
EarI	CTCTTC	3 cut(s)	15, 678, 1235
EciI	GGCGGA	1 cut(s)	1431
Ecl136II	GAGCTC	2 cut(s)	2246, 2688
Eco130I	CCWWGG	5 cut(s)	1035, 2352, 2655, 2932, 3036
Eco147I	AGGCCT	3 cut(s)	2101, 2383, 2416
Eco24I	GRGCYC	4 cut(s)	1709, 2248, 2627, 2690
Eco31I	GGTCTC	1 cut(s)	2594
Eco47I	GGWCC	6 cut(s)	102, 1067, 2498, 2701, 2765, 3230
Eco53kI	GAGCTC	2 cut(s)	2246, 2688
Eco57I	CTGAAG	5 cut(s)	969, 1473, 1578, 1599, 2559
Eco72I	CACGTG	1 cut(s)	213
Eco88I	CYCGRG	1 cut(s)	2745
Eco91I	GGTNACC	2 cut(s)	2561, 3338
EcoICRI	GAGCTC	2 cut(s)	2246, 2688
EcoNI	CCTNNNNNAGG	1 cut(s)	2868
EcoO109I	RGGNCCY	2 cut(s)	1067, 2498
EcoO65I	GGTNACC	2 cut(s)	2561, 3338
EcoRII	CCWGG	8 cut(s)	309, 376, 773, 788, 2137, 2404, 3049, 3079
EcoT14I	CCWWGG	5 cut(s)	1035, 2352, 2655, 2932, 3036
EcoT38I	GRGCYC	4 cut(s)	1709, 2248, 2627, 2690
EgeI	GGCGCC	2 cut(s)	779, 2924
EheI	GGCGCC	2 cut(s)	779, 2924
ErhI	CCWWGG	5 cut(s)	1035, 2352, 2655, 2932, 3036
Esp3I	CGTCTC	1 cut(s)	1877
FalI	AAGNNNNNCTT	2 cut(s)	2708, 2740
FaqI	GGGAC	2 cut(s)	167, 1739
FauI	CCCGC	2 cut(s)	1122, 1951
FbaI	TGATCA	1 cut(s)	2839
FblI	GTMKAC	3 cut(s)	41, 642, 2637
FriOI	GRGCYC	4 cut(s)	1709, 2248, 2627, 2690
FspBI	CTAG	9 cut(s)	15, 1593, 1800, 1824, 1941, 2093, 2214, 2379, 3012
GlaI	GCGC	3 cut(s)	561, 779, 2924
GsaI	CCCAGC	1 cut(s)	2909
GsuI	CTGGAG	3 cut(s)	1119, 2036, 2221
HaeII	RGCGCY	2 cut(s)	781, 2926
HapII	CCGG	9 cut(s)	6, 27, 592, 1372, 1475, 2201, 2491, 2919, 3403
HhaI	GCGC	3 cut(s)	562, 780, 2925
Hin1I	GRCGYC	3 cut(s)	778, 1141, 2923
Hin6I	GCGC	3 cut(s)	560, 778, 2923
HinP1I	GCGC	3 cut(s)	560, 778, 2923
HindIII	AAGCTT	1 cut(s)	736
HpaII	CCGG	9 cut(s)	6, 27, 592, 1372, 1475, 2201, 2491, 2919, 3403
HphI	GGTGA	7 cut(s)	943, 1812, 1973, 2274, 2502, 3095, 3394
Hpy166II	GTNNAC	7 cut(s)	42, 210, 402, 643, 1667, 2219, 2638
Hpy8I	GTNNAC	7 cut(s)	42, 210, 402, 643, 1667, 2219, 2638
Hpy99I	CGWCG	2 cut(s)	170, 675
HpyAV	CCTTC	9 cut(s)	30, 757, 896, 1057, 1294, 1369, 1908, 2394, 2832
HpyCH4III	ACNGT	6 cut(s)	1168, 1513, 1671, 2428, 2440, 3397
HpyCH4IV	ACGT	2 cut(s)	212, 1141
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1283, 1910, 2020, 2348, 2453
HpySE526I	ACGT	2 cut(s)	212, 1141
Hsp92I	GRCGYC	3 cut(s)	778, 1141, 2923
HspAI	GCGC	3 cut(s)	560, 778, 2923
KasI	GGCGCC	2 cut(s)	777, 2922
KpnI	GGTACC	1 cut(s)	2270
Ksp22I	TGATCA	1 cut(s)	2839
LmnI	GCTCC	9 cut(s)	384, 505, 749, 1313, 2017, 2243, 2398, 2461, 2536
LweI	GCATC	6 cut(s)	526, 793, 934, 1005, 1579, 1906
MaeI	CTAG	9 cut(s)	15, 1593, 1800, 1824, 1941, 2093, 2214, 2379, 3012
MaeII	ACGT	2 cut(s)	212, 1141
MaeIII	GTNAC	8 cut(s)	850, 2125, 2561, 2740, 3041, 3149, 3338, 3389
MbiI	CCGCTC	1 cut(s)	1129
MfeI	CAATTG	1 cut(s)	966
MflI	RGATCY	3 cut(s)	424, 1438, 2231
MhlI	GDGCHC	6 cut(s)	1709, 2163, 2248, 2395, 2627, 2690
MlsI	TGGCCA	2 cut(s)	1876, 2894
MluNI	TGGCCA	2 cut(s)	1876, 2894
Mly113I	GGCGCC	2 cut(s)	778, 2923
MlyI	GAGTC	4 cut(s)	32, 149, 866, 1979
MmeI	TCCRAC	2 cut(s)	362, 2357
Mox20I	TGGCCA	2 cut(s)	1876, 2894
MroXI	GAANNNNTTC	1 cut(s)	497
MscI	TGGCCA	2 cut(s)	1876, 2894
MseI	TTAA	7 cut(s)	240, 825, 890, 2031, 2715, 2835, 3059
MslI	CAYNNNNRTG	1 cut(s)	2526
Msp20I	TGGCCA	2 cut(s)	1876, 2894
MspA1I	CMGCKG	3 cut(s)	2342, 2486, 3235
MspCI	CTTAAG	2 cut(s)	2714, 3058
MspI	CCGG	9 cut(s)	6, 27, 592, 1372, 1475, 2201, 2491, 2919, 3403
MunI	CAATTG	1 cut(s)	966
Mva1269I	GAATGC	1 cut(s)	2326
MvaI	CCWGG	8 cut(s)	311, 378, 775, 790, 2139, 2406, 3051, 3081
MwoI	GCNNNNNNNGC	5 cut(s)	1283, 1910, 2020, 2348, 2453
NarI	GGCGCC	2 cut(s)	778, 2923
NciI	CCSGG	2 cut(s)	7, 2920
NcoI	CCATGG	1 cut(s)	2352
NmuCI	GTSAC	1 cut(s)	850
NspI	RCATGY	4 cut(s)	1534, 2027, 2302, 3378
NspV	TTCGAA	2 cut(s)	3198, 3365
PagI	TCATGA	2 cut(s)	361, 1222
PaqCI	CACCTGC	1 cut(s)	103
PasI	CCCWGGG	1 cut(s)	310
PceI	AGGCCT	3 cut(s)	2101, 2383, 2416
PciI	ACATGT	1 cut(s)	1530
PctI	GAATGC	1 cut(s)	2326
PdmI	GAANNNNTTC	1 cut(s)	497
PfeI	GAWTC	8 cut(s)	1118, 1226, 1538, 1574, 1748, 1964, 2210, 2795
PflMI	CCANNNNNTGG	3 cut(s)	2776, 3037, 3227
PfoI	TCCNGGA	1 cut(s)	2137
PleI	GAGTC	4 cut(s)	31, 149, 866, 1978
PluTI	GGCGCC	2 cut(s)	781, 2926
PmaCI	CACGTG	1 cut(s)	213
PmlI	CACGTG	1 cut(s)	213
PpsI	GAGTC	4 cut(s)	31, 149, 866, 1978
Ppu21I	YACGTR	1 cut(s)	213
PpuMI	RGGWCCY	2 cut(s)	1067, 2498
PscI	ACATGT	1 cut(s)	1530
PsiI	TTATAA	1 cut(s)	551
Psp124BI	GAGCTC	2 cut(s)	2248, 2690
Psp5II	RGGWCCY	2 cut(s)	1067, 2498
Psp6I	CCWGG	8 cut(s)	309, 376, 773, 788, 2137, 2404, 3049, 3079
PspCI	CACGTG	1 cut(s)	213
PspEI	GGTNACC	2 cut(s)	2561, 3338
PspFI	CCCAGC	1 cut(s)	2905
PspGI	CCWGG	8 cut(s)	309, 376, 773, 788, 2137, 2404, 3049, 3079
PspPPI	RGGWCCY	2 cut(s)	1067, 2498
PsrI	GAACNNNNNNTAC	2 cut(s)	118, 150
PstI	CTGCAG	1 cut(s)	2061
PstNI	CAGNNNCTG	3 cut(s)	1751, 1979, 3332
PsuI	RGATCY	3 cut(s)	424, 1438, 2231
PvuII	CAGCTG	2 cut(s)	2342, 2486
RsaI	GTAC	5 cut(s)	293, 1081, 1494, 2268, 2914
RsaNI	GTAC	5 cut(s)	292, 1080, 1493, 2267, 2913
RseI	CAYNNNNRTG	1 cut(s)	2526
SacI	GAGCTC	2 cut(s)	2248, 2690
SaqAI	TTAA	7 cut(s)	240, 825, 890, 2031, 2715, 2835, 3059
SchI	GAGTC	4 cut(s)	32, 149, 866, 1979
SduI	GDGCHC	6 cut(s)	1709, 2163, 2248, 2395, 2627, 2690
SfaNI	GCATC	6 cut(s)	526, 793, 934, 1005, 1579, 1906
SfcI	CTRYAG	7 cut(s)	405, 1167, 1743, 1908, 2057, 2436, 2542
SfoI	GGCGCC	2 cut(s)	779, 2924
SfuI	TTCGAA	2 cut(s)	3198, 3365
SinI	GGWCC	6 cut(s)	102, 1067, 2498, 2701, 2765, 3230
SmiMI	CAYNNNNRTG	1 cut(s)	2526
SmlI	CTYRAG	3 cut(s)	1022, 2714, 3058
SmoI	CTYRAG	3 cut(s)	1022, 2714, 3058
SseBI	AGGCCT	3 cut(s)	2101, 2383, 2416
SsiI	CCGC	9 cut(s)	100, 279, 1129, 1442, 1568, 1913, 1958, 2285, 3233
SspDI	GGCGCC	2 cut(s)	777, 2922
SspI	AATATT	3 cut(s)	443, 1176, 3362
SspMI	CTAG	9 cut(s)	15, 1593, 1800, 1824, 1941, 2093, 2214, 2379, 3012
SstI	GAGCTC	2 cut(s)	2248, 2690
StuI	AGGCCT	3 cut(s)	2101, 2383, 2416
StyI	CCWWGG	5 cut(s)	1035, 2352, 2655, 2932, 3036
TaaI	ACNGT	6 cut(s)	1168, 1513, 1671, 2428, 2440, 3397
TaiI	ACGT	2 cut(s)	215, 1144
TaqI	TCGA	7 cut(s)	303, 437, 681, 1497, 2798, 3198, 3365
TatI	WGTACW	2 cut(s)	1492, 2912
TauI	GCSGC	1 cut(s)	282
TfiI	GAWTC	8 cut(s)	1118, 1226, 1538, 1574, 1748, 1964, 2210, 2795
Tru1I	TTAA	7 cut(s)	240, 825, 890, 2031, 2715, 2835, 3059
Tru9I	TTAA	7 cut(s)	240, 825, 890, 2031, 2715, 2835, 3059
TseFI	GTSAC	1 cut(s)	850
Tsp45I	GTSAC	1 cut(s)	850
TspDTI	ATGAA	8 cut(s)	490, 962, 1149, 1239, 1494, 1784, 2825, 3006
TspGWI	ACGGA	5 cut(s)	59, 1163, 1250, 1901, 3160
Van91I	CCANNNNNTGG	3 cut(s)	2776, 3037, 3227
Vha464I	CTTAAG	2 cut(s)	2714, 3058
VpaK11BI	GGWCC	6 cut(s)	102, 1067, 2498, 2701, 2765, 3230
XagI	CCTNNNNNAGG	1 cut(s)	2868
XapI	RAATTY	6 cut(s)	227, 497, 663, 1093, 2845, 3212
XbaI	TCTAGA	2 cut(s)	1940, 2092
XceI	RCATGY	4 cut(s)	1534, 2027, 2302, 3378
XcmI	CCANNNNNNNNNTGG	1 cut(s)	796
XmiI	GTMKAC	3 cut(s)	41, 642, 2637
XmnI	GAANNNNTTC	1 cut(s)	497
XspI	CTAG	9 cut(s)	15, 1593, 1800, 1824, 1941, 2093, 2214, 2379, 3012
ZraI	GACGTC	1 cut(s)	1142

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.