AT5G47020

No description available

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
19081458 .. 19090104
8647 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G47020.1

Sequence Viewer

Length: 4266 bp
ATGCTTGGACTTGTGTTCTTGTGTGTCCTTTTGGTCTCTACGCCATGTTTTAGCTTATCACAGTATGGGGTCACTGAATTTGAGAGCTCTGTGAGATTGTTTTCAGATGAAGCTTCTGGAAATTCTACTAGTTCTCCGATTTCTGTGACTTGTCAAGACCTGGATGGTGTTGGATCGTTGAATACCACTTGTACATTGAACTCGAATTTGCGATTCGATTCCGATGTTTATGTATATGGAACTGGTAATCTGAACATACTTGCACATGTCTTAGTTGATTGCCCTGTTGAAGGATGTATGATCACCTTCAATGTATCTGGAACTATTCATTTGGGTCAATCAGCAAGAATTGTTGCTGGTTCTGTGGTTTTTTCTGCTATCAACTTAACAATGGATAGCAATTCGTCTATCTACACGACAGCATTGGCTGGACCACCACCTTCTCAGACTAGTGGAACACCATATGGTATTGATGGTGCCGGTGGAGGCCATGGTGGGAGAGGTGCTTCCTGTGTGAAGAGTAATAAAACGACTTATTGGGGTGGTGATGTTTATGCTTGGTCGTCTTTGCATGATCCGTGGAGCTATGGGAGTGAGGGAGGGGTTAAGTTATCCACAAAGAATATCAGAGGCAAAGGTGGAGGTCGTGTTAAACTCATATTGACGGACACAGTACATGTGAATGGAACTGTTTCCGCAGATGGTGGTGATGCTGGAGAGGAAGGGGGTGGAGGATCTGGAGGAAGTATCTGTATTCGTGCGGTAAAGCTGAAGGGTTACGGTAAAATATCTGCATCGGGTGGGAGGGGATGGGGTGGAGGTGGCGGAGGAAGGATCTCTCTTGACTGTTACAGCATACAAGAAGATGTCAAAGTTTTTGTTCATGGTGGCGCAAGTATCGGGTGCCCCAAAAATGCAGGAGCAGCTGGAACATACTTTAATGCTGAATTAGTGAGTTTAAGGGTTGGAAATGATAACATGACTACAGAGACAGAAACTCCTTTGCTCGATTTTCCTACAAGGCCTCTGTGGTCAAACATCTATGTAGATAATAATGCAAAAGTTTTGGTCCCGCTGCTGTGGACCAGAATGCAGGTCGGAGGTCAAATCAGTCTTTATCGGGGAAGCAGCATTGTTTTCGGGTTATCAAAATATCCAATTTCAGAATTTGAGCTTGTTGCTGAAGAACTTTTAATGAGTAACTCCGTTATAAAGGTTTTTGGTGCATTACGACTTGTTACGAAGATGCTGCTCATGTTGAATTCTGTGATTCAAATTGATGGTGAAGGAAACCCTGCAGTGCCTTCCTCTGTTCTTGAAGTTCGCAACCTTGCAGTTCTAAAGGGAAAATCCGTCATTACTTCTAATACGAACTTGGGTGTATATGGTCAAGGAATGTTGACGCTATCTGGTCCTGGGGATGCAATTAAAGGCCAAAGACTTTCCTTATCTCAATTTTACAACATAACTGTTGGACCAGGCTCTATACTTCAAGCACCACTTGATGATTATGAAAGCAAAAACGCGGTTACTCAGACCCTTTGTGAGAGCAAAACATGCCCAATAGATTTAATCAGTCCGCCGGATGATTGCCATGTCAATTATACACTATCCTTTTCCCTTCAGATATGTCGAGTTGAGGACATTCTTGTGAGAGGACTTGTGAAAGGAAGCATAATTCAAATCCACAGGGCGAGAACGGTAGTAGTTACTGATGATGGCTTGATAACTGCATCTGGATTTGGTTGCAGTGCTGGGTTGGGGAAGGGACTTTATTCAAATGGGGCTGGTAGTGGTGCTGGGCATGGAGGACGAGGGGGATCAGGCATTTTCAATGGGAGAGTATGCAACGGAGGACATACCTATGGTGATCCTGATTTTCCCTGTGAGTTAGGAAGCGGAGCAGAGAGTCCAGATAAATCATATGGGAATGTGACTGGTGGAGGGATGATAGTAATTGGCTCCATCCAGTTTCCTCTTTTGACTCTTAATCTGCGGGGATCTCTGAGCTCTGATGGTCAAAGCCTTTGGAAGCCAACAGCGAATGGTAACAGATCTTTGGTCGGTGGAGTTGGTGGGGGATCTGGTGGGACGATTCTTCTTTTCCTTCAGATGCTTGAACTCTCAAAGAATTCATCTCTATCAGTTCGAGGGGGCCGGGGTGGGCCTCTTGGGGGTGGTGGAGGTGGAGGAGGGAGACTTCACTTTCACTGGGACATGTTACATACTGGGGACGAGTATTCTCCTGTTGCAATTGTCAAGGGGTCCATTAGTAATAGAGGAGGTGCAGGGGACAATGGAGGTCGATTCGGGGAAGAGGGAACAATGACTGGGAAAAAGTGTCCAAAGGGACTCTACGGTACATTCTGCTTGGAATGCCCCATTGGCACTTACAAGAACGTCGAAGGCTCTGACAAACGTCTTTGTACTCCCTGCCCGCCTGAGCATCTTCCAAGTCGTGCAAAATTTGTATACGTACGAGGAGGAGTTAGCGAACCTGTTTGTCCCTATAAATGTGTATCAGAAAAATACAGATTGCCAAACTGCTATACACCTCTGGAAGAGCTTGTCTATACATTTGGAGGGCCATTGCCCTTTACTCTTCTTCTATCTTGTGTGGTGGTAGTTTTGGGTCTGTTGCTAAGCACATTAAGTATCAAATTGCTCAGGTTGAGTTTCTATGGTGCTAATTCCATTGAACACCAGAGTGCACATTGTTTACCCCATCTTCTGTCACTCTCTGAGGTTCGAGGCGCAAAATCTGAGGACACGCAAACCCATGCTTACCGTATGTACTTCATGGGTCCAAACAATTTCAGGGAACCTTGGCATCTGCCCTACTCTCCTCCTGGTGCAATCATAGAGATAGTGTACGAAGATGCTTTTAACAGCTTTATTAATGAAATAAACTCTACCGCAGCATATGATTGGTGGGAAGGGTCTGTGCACAGCATTCTTTCAGTTCTTGCAAATCCTTGTGCCTGGTCGTGGAAACAATGGCGTCGCAGGAGAAAAATTCATCGCCTTCAAGAATATGTCAAATCTCAATATGACCATTCTTGCCTCCGCTCATGCAGATCTAGAGCTCTCTACAAAGGGATGAAGGTTGGAGCCACTCCGGATCTGATGGTTGCATACATAGATTTCTTCCTTGGCGGTGACGAGAAGCGTGTAGATATGGTCTCTATTATACAGAAAAGATTCCCAATGTGCATACTTTTTGGAGGAGATGGAAGTTATATGTCACCCTATAGTCTCCATAGTGATACACTGTTAACAAATCTTCTTGGCCAGCACATCCCACCGAGTGTTTGGCACCGGTTTGTTGCTGGTTTAAATGCTCAGCTTAGGACTGTGAGGCACGGATCAATTCGGTCAGCATTACTTCCTGTCATTAGGTGGATAAACAGCCATGGAAATCCTCAACTCGAATTCCATGGAGTAAGAATTGAACTTGGATGGTTTCAAGCTACAGCTTCTGGATATTACCAACTTGGTATCTTGGTTTTTGTTGGCGATTTTCCTCTGAACACTGTAAACAGATCACTGTCGTTCAGCAGAAGTGACGACGAGTCCCCTGGGAACAACTCTGCATGTCCAAGCAAATCTCTTATCGAGTTGCAGCAAAACTTGATCCAACCAGGACATGGATTATCTCGGAAGAGGATCAATGGTGGAATCAATGGAGGCCTCATCAATGAGATTTCACTAGAATCTTTGGAGTATCGAAGGGATTTACTTTTTCCATTTTCTCTCTTATTGAACAACACTCGACCTGTTGGGCGTCAGGATACTCTTCTCCGTTTTATTTCCATCCTTCTCCTTGCTGATCTTTCAGTTACGCTACTTGCATTACTTCAGTTCTATTGGCTTGCCCTTGCAGCCTTTCTTGCTATCCTCCTGATTCTCCCTCTCTCCCTTCTTTGCCCATTCCCTGCCGGCCTTAACGCTTTATTAAGTAAAGAAATGAGAAGAGCCTCACTTACTCGTATCTACGGCCTGTGGAATGCTACATCTCTAACAAACGTCATTGTGGCTTTCATTTGCGGTGTCATTCATTCCGGGTTTTTCACTGACGAGCTACCAAACATCTGGAACGCCATAAGGGATGATGATAAATGGTGGGTATTACCAACATTCCTCTTGTTACTCAAGTCAATACAAGCTCGGTTCCTTGATTGGCACGTCGCAAATCTAGAAGTACCAGACTTTTCTCTTCTTTGTCCAGATCCAGATACCTTCTGGGCATATGAATCTGGAGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1421

Amino Acids

152.78

Weight (kDa)

7.47

Isoelectric Point (pI)

38.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF8003 PF26010 776 - 850 2.1e-33 Domain of unknown function (DUF8003)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1211
Acc36I ACCTGC 1 cut(s) 1084
AccB1I GGYRCC 3 cut(s) 476, 903, 3315
AccB7I CCANNNNNTGG 1 cut(s) 3647
AccBSI CCGCTC 1 cut(s) 3069
AccI GTMKAC 1 cut(s) 2472
AccII CGCG 1 cut(s) 1526
AccIII TCCGGA 1 cut(s) 3118
AcoI YGGCCR 1 cut(s) 3289
AcsI RAATTY 9 cut(s) 77, 121, 205, 1166, 1261, 2131, 2465, 3015, 3431
AcuI CTGAAG 5 cut(s) 791, 1203, 1607, 2093, 3842
AcyI GRCGYC 2 cut(s) 3001, 3784
AdeI CACNNNGTG 1 cut(s) 3308
AfaI GTAC 8 cut(s) 193, 675, 2362, 2428, 2478, 2795, 2873, 4203
AfiI CCNNNNNNNGG 4 cut(s) 290, 2174, 2988, 3647
AflIII ACRYGT 3 cut(s) 265, 676, 2217
AgeI ACCGGT 1 cut(s) 3318
AhdI GACNNNNNGTC 1 cut(s) 3571
AhlI ACTAGT 2 cut(s) 128, 449
AjiI CACGTC 1 cut(s) 4186
AjnI CCWGG 7 cut(s) 159, 1414, 1477, 2848, 2981, 3577, 3640
AjuI GAANNNNNNNTTGG 2 cut(s) 2367, 2399
AleI CACNNNNGTG 1 cut(s) 2706
Alw21I GWGCWC 5 cut(s) 89, 2012, 2713, 2949, 3088
Alw26I GTCTC 5 cut(s) 40, 983, 2191, 3187, 3260
Alw44I GTGCAC 2 cut(s) 2709, 2945
AlwNI CAGNNNCTG 1 cut(s) 3479
Aor13HI TCCGGA 1 cut(s) 3118
ApaLI GTGCAC 2 cut(s) 2709, 2945
ApeKI GCWGC 7 cut(s) 923, 1075, 1128, 1249, 2918, 3622, 3881
ApoI RAATTY 9 cut(s) 77, 121, 205, 1166, 1261, 2131, 2465, 3015, 3431
AseI ATTAAT 1 cut(s) 2898
AsiGI ACCGGT 1 cut(s) 3318
Asp700I GAANNNNTTC 2 cut(s) 691, 3200
AspLEI GCGC 2 cut(s) 893, 2756
AsuC2I CCSGG 2 cut(s) 2159, 4063
AsuHPI GGTGA 7 cut(s) 295, 557, 719, 1295, 1880, 3170, 3237
AvaII GGWCC 7 cut(s) 431, 1069, 1083, 1412, 1475, 2265, 2804
BaeGI GKGCMC 3 cut(s) 908, 2713, 2949
BalI TGGCCA 1 cut(s) 3291
BanI GGYRCC 3 cut(s) 476, 903, 3315
BanII GRGCYC 3 cut(s) 89, 2012, 3088
Bbv12I GWGCWC 5 cut(s) 89, 2012, 2713, 2949, 3088
BbvI GCAGC 7 cut(s) 935, 1062, 1140, 1236, 2930, 3634, 3893
BceAI ACGGC 1 cut(s) 4012
BcgI CGANNNNNNTGC 4 cut(s) 1120, 1154, 1231, 1265
BciT130I CCWGG 7 cut(s) 161, 1416, 1479, 2850, 2983, 3579, 3642
BciVI GTATCC 1 cut(s) 3784
BclI TGATCA 1 cut(s) 300
BcnI CCSGG 2 cut(s) 2159, 4063
BcoDI GTCTC 5 cut(s) 40, 983, 2191, 3187, 3260
BcuI ACTAGT 2 cut(s) 128, 449
BfaI CTAG 5 cut(s) 129, 450, 3081, 3710, 4196
BfmI CTRYAG 4 cut(s) 984, 1296, 3250, 3471
BfuAI ACCTGC 1 cut(s) 1084
BfuI GTATCC 1 cut(s) 3784
BglI GCCNNNNNGGC 1 cut(s) 2385
BglII AGATCT 2 cut(s) 2054, 3077
BisI GCNGC 7 cut(s) 924, 1076, 1129, 1250, 2919, 3623, 3882
BlpI GCTNAGC 2 cut(s) 2642, 3342
BlsI GCNGC 7 cut(s) 925, 1077, 1130, 1251, 2920, 3624, 3883
Bme1390I CCNGG 9 cut(s) 161, 1416, 1479, 2159, 2850, 2983, 3579, 3642, 4063
Bme18I GGWCC 7 cut(s) 431, 1069, 1083, 1412, 1475, 2265, 2804
BmeRI GACNNNNNGTC 1 cut(s) 3571
BmgBI CACGTC 1 cut(s) 4186
BmrFI CCNGG 9 cut(s) 161, 1416, 1479, 2159, 2850, 2983, 3579, 3642, 4063
BmrI ACTGGG 3 cut(s) 2221, 2238, 2340
BmsI GCATC 9 cut(s) 700, 803, 1236, 1411, 1742, 2103, 2455, 2839, 2869
BmuI ACTGGG 3 cut(s) 2221, 2238, 2340
BoxI GACNNNNGTC 1 cut(s) 2418
BpmI CTGGAG 2 cut(s) 735, 759
Bpu10I CCTNAGC 3 cut(s) 2442, 2666, 3347
Bpu1102I GCTNAGC 2 cut(s) 2642, 3342
BpuEI CTTGAG 1 cut(s) 4136
BpuMI CCSGG 2 cut(s) 2159, 4063
BsaAI YACGTR 1 cut(s) 2476
BsaHI GRCGYC 2 cut(s) 3001, 3784
BsaI GGTCTC 2 cut(s) 40, 3187
BsaWI WCCGGW 2 cut(s) 3118, 3318
BsaXI ACNNNNNCTCC 6 cut(s) 118, 148, 633, 663, 982, 1012
Bsc4I CCNNNNNNNGG 4 cut(s) 290, 2174, 2988, 3647
Bse118I RCCGGY 3 cut(s) 479, 3318, 3938
Bse1I ACTGG 6 cut(s) 247, 1942, 1969, 2216, 2233, 2335
Bse3DI GCAATG 1 cut(s) 2588
BseAI TCCGGA 1 cut(s) 3118
BseBI CCWGG 7 cut(s) 161, 1416, 1479, 2850, 2983, 3579, 3642
BseLI CCNNNNNNNGG 4 cut(s) 290, 2174, 2988, 3647
BseMI GCAATG 1 cut(s) 2588
BseMII CTCAG 8 cut(s) 458, 1547, 1997, 2433, 2680, 2733, 2754, 3356
BseNI ACTGG 6 cut(s) 247, 1942, 1969, 2216, 2233, 2335
BseRI GAGGAG 6 cut(s) 2205, 2295, 2496, 2499, 2835, 3240
BseSI GKGCMC 3 cut(s) 908, 2713, 2949
BseXI GCAGC 7 cut(s) 935, 1062, 1140, 1236, 2930, 3634, 3893
BseYI CCCAGC 2 cut(s) 1754, 1799
BsgI GTGCAG 1 cut(s) 2307
Bsh1236I CGCG 1 cut(s) 1526
BshNI GGYRCC 3 cut(s) 476, 903, 3315
BshTI ACCGGT 1 cut(s) 3318
BsiHKAI GWGCWC 5 cut(s) 89, 2012, 2713, 2949, 3088
BsiSI CCGG 7 cut(s) 480, 1583, 2158, 3119, 3319, 3939, 4062
BsiWI CGTACG 1 cut(s) 2476
BslFI GGGAC 9 cut(s) 1055, 1782, 2104, 2228, 2246, 2306, 2364, 2490, 3559
BslI CCNNNNNNNGG 4 cut(s) 290, 2174, 2988, 3647
BsmAI GTCTC 5 cut(s) 40, 983, 2191, 3187, 3260
BsmFI GGGAC 9 cut(s) 1055, 1782, 2104, 2228, 2246, 2306, 2364, 2490, 3559
BsmI GAATGC 4 cut(s) 1095, 2381, 2952, 4012
Bso31I GGTCTC 2 cut(s) 40, 3187
Bsp1286I GDGCHC 6 cut(s) 89, 908, 2012, 2713, 2949, 3088
Bsp13I TCCGGA 1 cut(s) 3118
Bsp1407I TGTACA 1 cut(s) 191
Bsp1720I GCTNAGC 2 cut(s) 2642, 3342
Bsp19I CCATGG 3 cut(s) 490, 3412, 3436
BspCNI CTCAG 8 cut(s) 457, 1546, 1998, 2434, 2679, 2734, 2755, 3355
BspEI TCCGGA 1 cut(s) 3118
BspFNI CGCG 1 cut(s) 1526
BspMAI CTGCAG 1 cut(s) 1300
BspMI ACCTGC 1 cut(s) 1084
BspQI GCTCTTC 2 cut(s) 2556, 3967
BspT107I GGYRCC 3 cut(s) 476, 903, 3315
BspTNI GGTCTC 2 cut(s) 40, 3187
BsrBI CCGCTC 1 cut(s) 3069
BsrDI GCAATG 1 cut(s) 2588
BsrFI RCCGGY 3 cut(s) 479, 3318, 3938
BsrGI TGTACA 1 cut(s) 191
BsrI ACTGG 6 cut(s) 247, 1942, 1969, 2216, 2233, 2335
BssAI RCCGGY 3 cut(s) 479, 3318, 3938
BssNAI GTATAC 1 cut(s) 2473
BssNI GRCGYC 2 cut(s) 3001, 3784
BssT1I CCWWGG 5 cut(s) 490, 2825, 3151, 3412, 3436
Bst1107I GTATAC 1 cut(s) 2473
Bst2UI CCWGG 7 cut(s) 161, 1416, 1479, 2850, 2983, 3579, 3642
Bst6I CTCTTC 8 cut(s) 512, 2310, 2556, 2607, 3656, 3801, 3967, 4221
BstACI GRCGYC 2 cut(s) 3001, 3784
BstAPI GCANNNNNTGC 1 cut(s) 1557
BstAUI TGTACA 1 cut(s) 191
BstBAI YACGTR 1 cut(s) 2476
BstC8I GCNNGC 4 cut(s) 2438, 3293, 3873, 3940
BstDSI CCRYGG 4 cut(s) 490, 578, 3412, 3436
BstENI CCTNNNNNAGG 1 cut(s) 288
BstFNI CGCG 1 cut(s) 1526
BstHHI GCGC 2 cut(s) 893, 2756
BstMAI GTCTC 5 cut(s) 40, 983, 2191, 3187, 3260
BstMWI GCNNNNNNNGC 6 cut(s) 923, 1557, 2376, 2385, 3881, 3890
BstNI CCWGG 7 cut(s) 161, 1416, 1479, 2850, 2983, 3579, 3642
BstNSI RCATGY 5 cut(s) 269, 680, 1560, 2221, 3597
BstPAI GACNNNNGTC 1 cut(s) 2418
BstSCI CCNGG 9 cut(s) 159, 1414, 1477, 2157, 2848, 2981, 3577, 3640, 4061
BstSFI CTRYAG 4 cut(s) 984, 1296, 3250, 3471
BstSLI GKGCMC 3 cut(s) 908, 2713, 2949
BstSNI TACGTA 1 cut(s) 2476
BstUI CGCG 1 cut(s) 1526
BstV1I GCAGC 7 cut(s) 935, 1062, 1140, 1236, 2930, 3634, 3893
BstX2I RGATCY 8 cut(s) 734, 834, 2000, 2054, 2081, 3077, 3121, 4228
BstXI CCANNNNNNTGG 1 cut(s) 4092
BstYI RGATCY 8 cut(s) 734, 834, 2000, 2054, 2081, 3077, 3121, 4228
BstZ17I GTATAC 1 cut(s) 2473
BsuI GTATCC 1 cut(s) 3784
BtgI CCRYGG 4 cut(s) 490, 578, 3412, 3436
BtgZI GCGATG 1 cut(s) 3005
BtrI CACGTC 1 cut(s) 4186
BtsI GCAGTG 2 cut(s) 1305, 1756
BtsIMutI CAGTG 8 cut(s) 72, 1305, 1756, 2209, 3269, 3531, 3545, 4071
BveI ACCTGC 1 cut(s) 1084
Cac8I GCNNGC 4 cut(s) 2438, 3293, 3873, 3940
CaiI CAGNNNCTG 1 cut(s) 3479
CfoI GCGC 2 cut(s) 893, 2756
Cfr10I RCCGGY 3 cut(s) 479, 3318, 3938
CseI GACGC 3 cut(s) 1411, 2990, 3773
Csp6I GTAC 8 cut(s) 192, 674, 2361, 2427, 2477, 2794, 2872, 4202
CspAI ACCGGT 1 cut(s) 3318
CviQI GTAC 8 cut(s) 192, 674, 2361, 2427, 2477, 2794, 2872, 4202
DraI TTTAAA 1 cut(s) 3336
DraIII CACNNNGTG 1 cut(s) 3308
DriI GACNNNNNGTC 1 cut(s) 3571
EaeI YGGCCR 1 cut(s) 3289
Eam1104I CTCTTC 8 cut(s) 512, 2310, 2556, 2607, 3656, 3801, 3967, 4221
Eam1105I GACNNNNNGTC 1 cut(s) 3571
EarI CTCTTC 8 cut(s) 512, 2310, 2556, 2607, 3656, 3801, 3967, 4221
EciI GGCGGA 2 cut(s) 840, 1569
Ecl136II GAGCTC 3 cut(s) 87, 2010, 3086
Eco105I TACGTA 1 cut(s) 2476
Eco130I CCWWGG 5 cut(s) 490, 2825, 3151, 3412, 3436
Eco147I AGGCCT 2 cut(s) 1024, 3690
Eco24I GRGCYC 3 cut(s) 89, 2012, 3088
Eco31I GGTCTC 2 cut(s) 40, 3187
Eco47I GGWCC 7 cut(s) 431, 1069, 1083, 1412, 1475, 2265, 2804
Eco53kI GAGCTC 3 cut(s) 87, 2010, 3086
Eco57I CTGAAG 5 cut(s) 791, 1203, 1607, 2093, 3842
EcoICRI GAGCTC 3 cut(s) 87, 2010, 3086
EcoNI CCTNNNNNAGG 1 cut(s) 288
EcoRI GAATTC 3 cut(s) 1261, 2131, 3431
EcoRII CCWGG 7 cut(s) 159, 1414, 1477, 2848, 2981, 3577, 3640
EcoT14I CCWWGG 5 cut(s) 490, 2825, 3151, 3412, 3436
EcoT38I GRGCYC 3 cut(s) 89, 2012, 3088
ErhI CCWWGG 5 cut(s) 490, 2825, 3151, 3412, 3436
FalI AAGNNNNNCTT 2 cut(s) 1485, 1517
FaqI GGGAC 9 cut(s) 1055, 1782, 2104, 2228, 2246, 2306, 2364, 2490, 3559
FauI CCCGC 3 cut(s) 1080, 1989, 2445
FauNDI CATATG 4 cut(s) 463, 1924, 2923, 4249
FbaI TGATCA 1 cut(s) 300
FblI GTMKAC 1 cut(s) 2472
Fnu4HI GCNGC 7 cut(s) 924, 1076, 1129, 1250, 2919, 3623, 3882
FriOI GRGCYC 3 cut(s) 89, 2012, 3088
Fsp4HI GCNGC 7 cut(s) 924, 1076, 1129, 1250, 2919, 3623, 3882
FspBI CTAG 5 cut(s) 129, 450, 3081, 3710, 4196
GlaI GCGC 2 cut(s) 892, 2755
GluI GCNGC 7 cut(s) 924, 1076, 1129, 1250, 2919, 3623, 3882
GsaI CCCAGC 2 cut(s) 1758, 1803
GsuI CTGGAG 2 cut(s) 735, 759
HapII CCGG 7 cut(s) 480, 1583, 2158, 3119, 3319, 3939, 4062
HgaI GACGC 3 cut(s) 1411, 2990, 3773
HhaI GCGC 2 cut(s) 893, 2756
Hin1I GRCGYC 2 cut(s) 3001, 3784
Hin6I GCGC 2 cut(s) 891, 2754
HinP1I GCGC 2 cut(s) 891, 2754
HincII GTYRAC 2 cut(s) 1401, 3276
HindII GTYRAC 2 cut(s) 1401, 3276
HindIII AAGCTT 1 cut(s) 111
HpaI GTTAAC 1 cut(s) 3276
HpaII CCGG 7 cut(s) 480, 1583, 2158, 3119, 3319, 3939, 4062
HphI GGTGA 7 cut(s) 295, 557, 719, 1295, 1880, 3170, 3237
Hpy166II GTNNAC 9 cut(s) 1083, 1401, 2473, 2711, 2720, 2872, 2947, 3276, 3538
Hpy8I GTNNAC 9 cut(s) 1083, 1401, 2473, 2711, 2720, 2872, 2947, 3276, 3538
Hpy99I CGWCG 4 cut(s) 2405, 3006, 3572, 4190
HpyCH4IV ACGT 5 cut(s) 2400, 2419, 2475, 4026, 4185
HpyF10VI GCNNNNNNNGC 6 cut(s) 923, 1557, 2376, 2385, 3881, 3890
HpySE526I ACGT 5 cut(s) 2400, 2419, 2475, 4026, 4185
Hsp92I GRCGYC 2 cut(s) 3001, 3784
HspAI GCGC 2 cut(s) 891, 2754
Kpn2I TCCGGA 1 cut(s) 3118
KroI GCCGGC 1 cut(s) 3938
KroNI GCCGGC 1 cut(s) 3940
Ksp22I TGATCA 1 cut(s) 300
KspAI GTTAAC 1 cut(s) 3276
LguI GCTCTTC 2 cut(s) 2556, 3967
LmnI GCTCC 6 cut(s) 582, 920, 1901, 1967, 3110, 4259
Lsp1109I GCAGC 7 cut(s) 935, 1062, 1140, 1236, 2930, 3634, 3893
LweI GCATC 9 cut(s) 700, 803, 1236, 1411, 1742, 2103, 2455, 2839, 2869
MaeI CTAG 5 cut(s) 129, 450, 3081, 3710, 4196
MaeII ACGT 5 cut(s) 2400, 2419, 2475, 4026, 4185
MbiI CCGCTC 1 cut(s) 3069
MfeI CAATTG 1 cut(s) 2253
MflI RGATCY 8 cut(s) 734, 834, 2000, 2054, 2081, 3077, 3121, 4228
MhlI GDGCHC 6 cut(s) 89, 908, 2012, 2713, 2949, 3088
MlsI TGGCCA 1 cut(s) 3291
MluNI TGGCCA 1 cut(s) 3291
MlyI GAGTC 4 cut(s) 1918, 1978, 2346, 3581
MmeI TCCRAC 6 cut(s) 151, 946, 1078, 1453, 3088, 3661
Mox20I TGGCCA 1 cut(s) 3291
MroI TCCGGA 1 cut(s) 3118
MroNI GCCGGC 1 cut(s) 3938
MroXI GAANNNNTTC 2 cut(s) 691, 3200
MscI TGGCCA 1 cut(s) 3291
MslI CAYNNNNRTG 4 cut(s) 681, 1649, 1863, 2706
Msp20I TGGCCA 1 cut(s) 3291
MspA1I CMGCKG 2 cut(s) 926, 1075
MspI CCGG 7 cut(s) 480, 1583, 2158, 3119, 3319, 3939, 4062
MspR9I CCNGG 9 cut(s) 161, 1416, 1479, 2159, 2850, 2983, 3579, 3642, 4063
MunI CAATTG 1 cut(s) 2253
Mva1269I GAATGC 4 cut(s) 1095, 2381, 2952, 4012
MvaI CCWGG 7 cut(s) 161, 1416, 1479, 2850, 2983, 3579, 3642
MvnI CGCG 1 cut(s) 1526
MwoI GCNNNNNNNGC 6 cut(s) 923, 1557, 2376, 2385, 3881, 3890
NaeI GCCGGC 1 cut(s) 3940
NciI CCSGG 2 cut(s) 2159, 4063
NcoI CCATGG 3 cut(s) 490, 3412, 3436
NdeI CATATG 4 cut(s) 463, 1924, 2923, 4249
NgoMIV GCCGGC 1 cut(s) 3938
NmuCI GTSAC 7 cut(s) 70, 145, 1933, 2733, 3158, 3243, 3563
NspI RCATGY 5 cut(s) 269, 680, 1560, 2221, 3597
OliI CACNNNNGTG 1 cut(s) 2706
PasI CCCWGGG 1 cut(s) 3578
PceI AGGCCT 2 cut(s) 1024, 3690
PciI ACATGT 3 cut(s) 265, 676, 2217
PciSI GCTCTTC 2 cut(s) 2556, 3967
PctI GAATGC 4 cut(s) 1095, 2381, 2952, 4012
PdiI GCCGGC 1 cut(s) 3940
PdmI GAANNNNTTC 2 cut(s) 691, 3200
Pfl23II CGTACG 1 cut(s) 2476
PflMI CCANNNNNTGG 1 cut(s) 3647
PinAI ACCGGT 1 cut(s) 3318
PkrI GCNGC 7 cut(s) 925, 1077, 1130, 1251, 2920, 3624, 3883
PleI GAGTC 4 cut(s) 1917, 1978, 2346, 3580
PpsI GAGTC 4 cut(s) 1917, 1978, 2346, 3580
Ppu21I YACGTR 1 cut(s) 2476
PscI ACATGT 3 cut(s) 265, 676, 2217
PshAI GACNNNNGTC 1 cut(s) 2418
PshBI ATTAAT 1 cut(s) 2898
PsiI TTATAA 1 cut(s) 1211
Psp124BI GAGCTC 3 cut(s) 89, 2012, 3088
Psp6I CCWGG 7 cut(s) 159, 1414, 1477, 2848, 2981, 3577, 3640
PspFI CCCAGC 2 cut(s) 1754, 1799
PspGI CCWGG 7 cut(s) 159, 1414, 1477, 2848, 2981, 3577, 3640
PspLI CGTACG 1 cut(s) 2476
PstI CTGCAG 1 cut(s) 1300
PstNI CAGNNNCTG 1 cut(s) 3479
PsuI RGATCY 8 cut(s) 734, 834, 2000, 2054, 2081, 3077, 3121, 4228
PvuII CAGCTG 1 cut(s) 926
RsaI GTAC 8 cut(s) 193, 675, 2362, 2428, 2478, 2795, 2873, 4203
RsaNI GTAC 8 cut(s) 192, 674, 2361, 2427, 2477, 2794, 2872, 4202
RseI CAYNNNNRTG 4 cut(s) 681, 1649, 1863, 2706
SacI GAGCTC 3 cut(s) 89, 2012, 3088
SapI GCTCTTC 2 cut(s) 2556, 3967
SatI GCNGC 7 cut(s) 924, 1076, 1129, 1250, 2919, 3623, 3882
SchI GAGTC 4 cut(s) 1918, 1978, 2346, 3581
ScrFI CCNGG 9 cut(s) 161, 1416, 1479, 2159, 2850, 2983, 3579, 3642, 4063
SduI GDGCHC 6 cut(s) 89, 908, 2012, 2713, 2949, 3088
SfaNI GCATC 9 cut(s) 700, 803, 1236, 1411, 1742, 2103, 2455, 2839, 2869
SfcI CTRYAG 4 cut(s) 984, 1296, 3250, 3471
SinI GGWCC 7 cut(s) 431, 1069, 1083, 1412, 1475, 2265, 2804
SmiMI CAYNNNNRTG 4 cut(s) 681, 1649, 1863, 2706
SmlI CTYRAG 1 cut(s) 4151
SmoI CTYRAG 1 cut(s) 4151
SnaBI TACGTA 1 cut(s) 2476
SpeI ACTAGT 2 cut(s) 128, 449
SseBI AGGCCT 2 cut(s) 1024, 3690
SspMI CTAG 5 cut(s) 129, 450, 3081, 3710, 4196
SstI GAGCTC 3 cut(s) 89, 2012, 3088
StuI AGGCCT 2 cut(s) 1024, 3690
StyD4I CCNGG 9 cut(s) 159, 1414, 1477, 2157, 2848, 2981, 3577, 3640, 4061
StyI CCWWGG 5 cut(s) 490, 2825, 3151, 3412, 3436
TaiI ACGT 5 cut(s) 2403, 2422, 2478, 4029, 4188
TaqII GACCGA 1 cut(s) 3363
TatI WGTACW 4 cut(s) 191, 673, 2426, 2793
TscAI CASTG 8 cut(s) 79, 1305, 1756, 2216, 3276, 3538, 3552, 4078
TseFI GTSAC 7 cut(s) 70, 145, 1933, 2733, 3158, 3243, 3563
TseI GCWGC 7 cut(s) 923, 1075, 1128, 1249, 2918, 3622, 3881
Tsp45I GTSAC 7 cut(s) 70, 145, 1933, 2733, 3158, 3243, 3563
TspGWI ACGGA 7 cut(s) 567, 680, 1195, 1342, 1866, 3378, 3791
TspRI CASTG 8 cut(s) 79, 1305, 1756, 2216, 3276, 3538, 3552, 4078
Van91I CCANNNNNTGG 1 cut(s) 3647
VneI GTGCAC 2 cut(s) 2709, 2945
VpaK11BI GGWCC 7 cut(s) 431, 1069, 1083, 1412, 1475, 2265, 2804
VspI ATTAAT 1 cut(s) 2898
XagI CCTNNNNNAGG 1 cut(s) 288
XapI RAATTY 9 cut(s) 77, 121, 205, 1166, 1261, 2131, 2465, 3015, 3431
XbaI TCTAGA 2 cut(s) 3080, 4195
XceI RCATGY 5 cut(s) 269, 680, 1560, 2221, 3597
XcmI CCANNNNNNNNNTGG 3 cut(s) 3309, 3644, 4239
XmiI GTMKAC 1 cut(s) 2472
XmnI GAANNNNTTC 2 cut(s) 691, 3200
XspI CTAG 5 cut(s) 129, 450, 3081, 3710, 4196
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.