No description available
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DUF8003 | PF26010 | 801 - 875 | 7.7e-35 | Domain of unknown function (DUF8003) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 4 cut(s) | 1533, 1905, 3330, 3773 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 3914 |
| Acc36I | ACCTGC | 1 cut(s) | 3710 |
| AccB1I | GGYRCC | 3 cut(s) | 104, 1982, 2435 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2043, 2249 |
| AccBSI | CCGCTC | 1 cut(s) | 3147 |
| AccI | GTMKAC | 3 cut(s) | 2648, 3031, 4263 |
| AccII | CGCG | 1 cut(s) | 1707 |
| AcoI | YGGCCR | 6 cut(s) | 568, 1792, 2045, 3367, 3710, 3859 |
| AcuI | CTGAAG | 7 cut(s) | 66, 1275, 1365, 1493, 1547, 2165, 3089 |
| AdeI | CACNNNGTG | 2 cut(s) | 2249, 2534 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 362, 651, 701, 1597, 2043, 2249, 2658, 3066, 3719 |
| AflII | CTTAAG | 1 cut(s) | 2053 |
| AflIII | ACRYGT | 3 cut(s) | 384, 718, 1108 |
| AhlI | ACTAGT | 1 cut(s) | 521 |
| AjiI | CACGTC | 2 cut(s) | 719, 2534 |
| AjnI | CCWGG | 6 cut(s) | 231, 321, 979, 2663, 3059, 3065 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 2285, 2317, 2442, 2474, 3649, 3681 |
| AleI | CACNNNNGTG | 1 cut(s) | 1150 |
| Alw21I | GWGCWC | 1 cut(s) | 3618 |
| Alw26I | GTCTC | 5 cut(s) | 9, 1527, 1619, 2808, 3146 |
| Alw44I | GTGCAC | 1 cut(s) | 3614 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 1064, 2188, 3386, 3557 |
| Ama87I | CYCGRG | 4 cut(s) | 1894, 2835, 3159, 4065 |
| ApaI | GGGCCC | 1 cut(s) | 2664 |
| ApaLI | GTGCAC | 1 cut(s) | 3614 |
| AseI | ATTAAT | 1 cut(s) | 3474 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1260, 3278, 4054 |
| AspLEI | GCGC | 1 cut(s) | 1130 |
| AspS9I | GGNCC | 9 cut(s) | 229, 1155, 2240, 2289, 2425, 2660, 2661, 2882, 3063 |
| AsuC2I | CCSGG | 1 cut(s) | 2407 |
| AvaI | CYCGRG | 4 cut(s) | 1894, 2835, 3159, 4065 |
| AvaII | GGWCC | 6 cut(s) | 229, 1155, 2240, 2289, 2882, 3063 |
| AxyI | CCTNAGG | 1 cut(s) | 2421 |
| BaeGI | GKGCMC | 3 cut(s) | 2664, 3618, 4336 |
| BalI | TGGCCA | 2 cut(s) | 2047, 3369 |
| BamHI | GGATCC | 1 cut(s) | 2033 |
| BanI | GGYRCC | 3 cut(s) | 104, 1982, 2435 |
| BanII | GRGCYC | 3 cut(s) | 1895, 2486, 2664 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1701, 1733 |
| BauI | CACGAG | 1 cut(s) | 2244 |
| BbsI | GAAGAC | 1 cut(s) | 2784 |
| Bbv12I | GWGCWC | 1 cut(s) | 3618 |
| BbvCI | CCTCAGC | 2 cut(s) | 1977, 2189 |
| BceAI | ACGGC | 4 cut(s) | 799, 1807, 3697, 3846 |
| BciT130I | CCWGG | 6 cut(s) | 233, 323, 981, 2665, 3061, 3067 |
| BciVI | GTATCC | 1 cut(s) | 842 |
| BclI | TGATCA | 1 cut(s) | 1483 |
| BcnI | CCSGG | 1 cut(s) | 2407 |
| BcoDI | GTCTC | 5 cut(s) | 9, 1527, 1619, 2808, 3146 |
| BcuI | ACTAGT | 1 cut(s) | 521 |
| BfaI | CTAG | 6 cut(s) | 522, 1767, 1814, 2112, 4188, 4283 |
| BfmI | CTRYAG | 3 cut(s) | 420, 768, 2220 |
| BfrI | CTTAAG | 1 cut(s) | 2053 |
| BfuAI | ACCTGC | 1 cut(s) | 3710 |
| BfuI | GTATCC | 1 cut(s) | 842 |
| BglI | GCCNNNNNGGC | 4 cut(s) | 2424, 2433, 2460, 4331 |
| BglII | AGATCT | 3 cut(s) | 1018, 3155, 3791 |
| BmcAI | AGTACT | 1 cut(s) | 2722 |
| Bme1390I | CCNGG | 7 cut(s) | 233, 323, 981, 2407, 2665, 3061, 3067 |
| Bme18I | GGWCC | 6 cut(s) | 229, 1155, 2240, 2289, 2882, 3063 |
| BmeT110I | CYCGRG | 4 cut(s) | 1894, 2835, 3159, 4065 |
| BmgBI | CACGTC | 2 cut(s) | 719, 2534 |
| BmgT120I | GGNCC | 9 cut(s) | 229, 1155, 2240, 2289, 2425, 2660, 2661, 2882, 3063 |
| BmrFI | CCNGG | 7 cut(s) | 233, 323, 981, 2407, 2665, 3061, 3067 |
| BpiI | GAAGAC | 1 cut(s) | 2784 |
| BpmI | CTGGAG | 6 cut(s) | 344, 516, 1011, 1321, 2910, 3771 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1977, 2189 |
| BpuEI | CTTGAG | 3 cut(s) | 2654, 3527, 3808 |
| BpuMI | CCSGG | 1 cut(s) | 2407 |
| BsaAI | YACGTR | 1 cut(s) | 3630 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2493 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 655, 685, 705, 735, 2177, 2207, 2630, 2660 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 362, 651, 701, 1597, 2043, 2249, 2658, 3066, 3719 |
| Bse21I | CCTNAGG | 1 cut(s) | 2421 |
| Bse3DI | GCAATG | 2 cut(s) | 1073, 1927 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2493 |
| BseBI | CCWGG | 6 cut(s) | 233, 323, 981, 2665, 3061, 3067 |
| BseJI | GATNNNNATC | 1 cut(s) | 2493 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 362, 651, 701, 1597, 2043, 2249, 2658, 3066, 3719 |
| BseMI | GCAATG | 2 cut(s) | 1073, 1927 |
| BseMII | CTCAG | 5 cut(s) | 1212, 1968, 2180, 2811, 3434 |
| BseRI | GAGGAG | 4 cut(s) | 816, 2619, 2651, 2913 |
| BseSI | GKGCMC | 3 cut(s) | 2664, 3618, 4336 |
| BseX3I | CGGCCG | 1 cut(s) | 1792 |
| BseYI | CCCAGC | 2 cut(s) | 1506, 3571 |
| Bsh1236I | CGCG | 1 cut(s) | 1707 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1795 |
| BshNI | GGYRCC | 3 cut(s) | 104, 1982, 2435 |
| BsiEI | CGRYCG | 1 cut(s) | 1795 |
| BsiHKAI | GWGCWC | 1 cut(s) | 3618 |
| BsiHKCI | CYCGRG | 4 cut(s) | 1894, 2835, 3159, 4065 |
| BsiSI | CCGG | 2 cut(s) | 1795, 2406 |
| BslFI | GGGAC | 5 cut(s) | 58, 794, 2176, 3362, 4078 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 362, 651, 701, 1597, 2043, 2249, 2658, 3066, 3719 |
| BsmAI | GTCTC | 5 cut(s) | 9, 1527, 1619, 2808, 3146 |
| BsmBI | CGTCTC | 1 cut(s) | 2808 |
| BsmFI | GGGAC | 5 cut(s) | 58, 794, 2176, 3362, 4078 |
| BsmI | GAATGC | 4 cut(s) | 2456, 3421, 4090, 4115 |
| BsoBI | CYCGRG | 4 cut(s) | 1894, 2835, 3159, 4065 |
| Bsp120I | GGGCCC | 1 cut(s) | 2660 |
| Bsp1286I | GDGCHC | 5 cut(s) | 1895, 2486, 2664, 3618, 4336 |
| Bsp1407I | TGTACA | 1 cut(s) | 3168 |
| Bsp19I | CCATGG | 3 cut(s) | 650, 955, 3514 |
| BspCNI | CTCAG | 5 cut(s) | 1213, 1969, 2181, 2812, 3433 |
| BspFNI | CGCG | 1 cut(s) | 1707 |
| BspMAI | CTGCAG | 1 cut(s) | 772 |
| BspMI | ACCTGC | 1 cut(s) | 3710 |
| BspQI | GCTCTTC | 2 cut(s) | 1251, 4045 |
| BspT107I | GGYRCC | 3 cut(s) | 104, 1982, 2435 |
| BspTI | CTTAAG | 1 cut(s) | 2053 |
| BsrBI | CCGCTC | 1 cut(s) | 3147 |
| BsrDI | GCAATG | 2 cut(s) | 1073, 1927 |
| BsrGI | TGTACA | 1 cut(s) | 3168 |
| BssNAI | GTATAC | 2 cut(s) | 2649, 3032 |
| BssSI | CACGAG | 1 cut(s) | 2244 |
| BssT1I | CCWWGG | 7 cut(s) | 650, 955, 2903, 3229, 3364, 3514, 3656 |
| Bst1107I | GTATAC | 2 cut(s) | 2649, 3032 |
| Bst2BI | CACGAG | 1 cut(s) | 2244 |
| Bst2UI | CCWGG | 6 cut(s) | 233, 323, 981, 2665, 3061, 3067 |
| BstAFI | CTTAAG | 1 cut(s) | 2053 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 2442, 2451, 3725 |
| BstAUI | TGTACA | 1 cut(s) | 3168 |
| BstBAI | YACGTR | 1 cut(s) | 3630 |
| BstC8I | GCNNGC | 5 cut(s) | 1000, 1588, 2141, 3371, 4345 |
| BstDEI | CTNAG | 7 cut(s) | 1025, 1221, 1977, 2189, 2421, 2820, 3420 |
| BstDSI | CCRYGG | 4 cut(s) | 650, 955, 1192, 3514 |
| BstFNI | CGCG | 1 cut(s) | 1707 |
| BstHHI | GCGC | 1 cut(s) | 1130 |
| BstMAI | GTCTC | 5 cut(s) | 9, 1527, 1619, 2808, 3146 |
| BstMCI | CGRYCG | 1 cut(s) | 1795 |
| BstNI | CCWGG | 6 cut(s) | 233, 323, 981, 2665, 3061, 3067 |
| BstNSI | RCATGY | 9 cut(s) | 56, 264, 388, 833, 1112, 1632, 2872, 3377, 3675 |
| BstSCI | CCNGG | 7 cut(s) | 231, 321, 979, 2405, 2663, 3059, 3065 |
| BstSFI | CTRYAG | 3 cut(s) | 420, 768, 2220 |
| BstSLI | GKGCMC | 3 cut(s) | 2664, 3618, 4336 |
| BstUI | CGCG | 1 cut(s) | 1707 |
| BstV2I | GAAGAC | 1 cut(s) | 2784 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1152 |
| BstZ17I | GTATAC | 2 cut(s) | 2649, 3032 |
| BstZI | CGGCCG | 1 cut(s) | 1792 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2421 |
| BsuI | GTATCC | 1 cut(s) | 842 |
| BtgI | CCRYGG | 4 cut(s) | 650, 955, 1192, 3514 |
| BtgZI | GCGATG | 2 cut(s) | 2849, 3083 |
| BtrI | CACGTC | 2 cut(s) | 719, 2534 |
| BtsI | GCAGTG | 1 cut(s) | 1145 |
| BtsIMutI | CAGTG | 7 cut(s) | 540, 948, 1145, 1807, 2048, 3080, 3346 |
| BveI | ACCTGC | 1 cut(s) | 3710 |
| Cac8I | GCNNGC | 5 cut(s) | 1000, 1588, 2141, 3371, 4345 |
| CaiI | CAGNNNCTG | 4 cut(s) | 1064, 2188, 3386, 3557 |
| CfoI | GCGC | 1 cut(s) | 1130 |
| Cfr13I | GGNCC | 9 cut(s) | 229, 1155, 2240, 2289, 2425, 2660, 2661, 2882, 3063 |
| CseI | GACGC | 2 cut(s) | 1499, 3236 |
| DdeI | CTNAG | 7 cut(s) | 1025, 1221, 1977, 2189, 2421, 2820, 3420 |
| DraI | TTTAAA | 1 cut(s) | 1851 |
| DraIII | CACNNNGTG | 2 cut(s) | 2249, 2534 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3914 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3914 |
| EaeI | YGGCCR | 6 cut(s) | 568, 1792, 2045, 3367, 3710, 3859 |
| EagI | CGGCCG | 1 cut(s) | 1792 |
| EciI | GGCGGA | 1 cut(s) | 801 |
| EclXI | CGGCCG | 1 cut(s) | 1792 |
| Eco130I | CCWWGG | 7 cut(s) | 650, 955, 2903, 3229, 3364, 3514, 3656 |
| Eco147I | AGGCCT | 1 cut(s) | 3768 |
| Eco24I | GRGCYC | 3 cut(s) | 1895, 2486, 2664 |
| Eco47I | GGWCC | 6 cut(s) | 229, 1155, 2240, 2289, 2882, 3063 |
| Eco52I | CGGCCG | 1 cut(s) | 1792 |
| Eco57I | CTGAAG | 7 cut(s) | 66, 1275, 1365, 1493, 1547, 2165, 3089 |
| Eco81I | CCTNAGG | 1 cut(s) | 2421 |
| Eco88I | CYCGRG | 4 cut(s) | 1894, 2835, 3159, 4065 |
| EcoO109I | RGGNCCY | 5 cut(s) | 229, 2425, 2660, 2661, 2882 |
| EcoRI | GAATTC | 5 cut(s) | 289, 985, 2206, 2300, 2540 |
| EcoRII | CCWGG | 6 cut(s) | 231, 321, 979, 2663, 3059, 3065 |
| EcoT14I | CCWWGG | 7 cut(s) | 650, 955, 2903, 3229, 3364, 3514, 3656 |
| EcoT22I | ATGCAT | 5 cut(s) | 2594, 2693, 2962, 3730, 4078 |
| EcoT38I | GRGCYC | 3 cut(s) | 1895, 2486, 2664 |
| ErhI | CCWWGG | 7 cut(s) | 650, 955, 2903, 3229, 3364, 3514, 3656 |
| Esp3I | CGTCTC | 1 cut(s) | 2808 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 154, 186 |
| FaqI | GGGAC | 5 cut(s) | 58, 794, 2176, 3362, 4078 |
| FauI | CCCGC | 2 cut(s) | 2132, 2552 |
| FauNDI | CATATG | 2 cut(s) | 1996, 4121 |
| FbaI | TGATCA | 1 cut(s) | 1483 |
| FblI | GTMKAC | 3 cut(s) | 2648, 3031, 4263 |
| FriOI | GRGCYC | 3 cut(s) | 1895, 2486, 2664 |
| FspBI | CTAG | 6 cut(s) | 522, 1767, 1814, 2112, 4188, 4283 |
| GlaI | GCGC | 1 cut(s) | 1129 |
| GsaI | CCCAGC | 2 cut(s) | 1510, 3575 |
| GsuI | CTGGAG | 6 cut(s) | 344, 516, 1011, 1321, 2910, 3771 |
| HapII | CCGG | 2 cut(s) | 1795, 2406 |
| HgaI | GACGC | 2 cut(s) | 1499, 3236 |
| HhaI | GCGC | 1 cut(s) | 1130 |
| Hin6I | GCGC | 1 cut(s) | 1128 |
| HinP1I | GCGC | 1 cut(s) | 1128 |
| HincII | GTYRAC | 3 cut(s) | 1479, 2518, 3354 |
| HindII | GTYRAC | 3 cut(s) | 1479, 2518, 3354 |
| HindIII | AAGCTT | 2 cut(s) | 725, 2095 |
| HinfI | GANTC | 7 cut(s) | 1274, 1399, 2566, 2970, 3344, 3394, 4279 |
| HpaII | CCGG | 2 cut(s) | 1795, 2406 |
| Hpy99I | CGWCG | 1 cut(s) | 2535 |
| HpyCH4IV | ACGT | 4 cut(s) | 718, 2533, 3629, 4091 |
| HpyF3I | CTNAG | 7 cut(s) | 1025, 1221, 1977, 2189, 2421, 2820, 3420 |
| HpySE526I | ACGT | 4 cut(s) | 718, 2533, 3629, 4091 |
| HspAI | GCGC | 1 cut(s) | 1128 |
| Ksp22I | TGATCA | 1 cut(s) | 1483 |
| LguI | GCTCTTC | 2 cut(s) | 1251, 4045 |
| LmnI | GCTCC | 9 cut(s) | 663, 992, 1573, 1856, 1973, 2185, 2345, 2638, 3188 |
| MaeI | CTAG | 6 cut(s) | 522, 1767, 1814, 2112, 4188, 4283 |
| MaeII | ACGT | 4 cut(s) | 718, 2533, 3629, 4091 |
| MbiI | CCGCTC | 1 cut(s) | 3147 |
| MfeI | CAATTG | 1 cut(s) | 14 |
| MhlI | GDGCHC | 5 cut(s) | 1895, 2486, 2664, 3618, 4336 |
| MlsI | TGGCCA | 2 cut(s) | 2047, 3369 |
| MluNI | TGGCCA | 2 cut(s) | 2047, 3369 |
| MlyI | GAGTC | 1 cut(s) | 2560 |
| MmeI | TCCRAC | 6 cut(s) | 223, 1018, 1617, 2722, 3166, 3571 |
| Mox20I | TGGCCA | 2 cut(s) | 2047, 3369 |
| Mph1103I | ATGCAT | 5 cut(s) | 2594, 2693, 2962, 3730, 4078 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1260, 3278, 4054 |
| MscI | TGGCCA | 2 cut(s) | 2047, 3369 |
| MslI | CAYNNNNRTG | 7 cut(s) | 147, 306, 1150, 1409, 2388, 2696, 4120 |
| Msp20I | TGGCCA | 2 cut(s) | 2047, 3369 |
| MspA1I | CMGCKG | 2 cut(s) | 998, 3571 |
| MspCI | CTTAAG | 1 cut(s) | 2053 |
| MspI | CCGG | 2 cut(s) | 1795, 2406 |
| MspR9I | CCNGG | 7 cut(s) | 233, 323, 981, 2407, 2665, 3061, 3067 |
| MunI | CAATTG | 1 cut(s) | 14 |
| Mva1269I | GAATGC | 4 cut(s) | 2456, 3421, 4090, 4115 |
| MvaI | CCWGG | 6 cut(s) | 233, 323, 981, 2665, 3061, 3067 |
| MvnI | CGCG | 1 cut(s) | 1707 |
| NciI | CCSGG | 1 cut(s) | 2407 |
| NcoI | CCATGG | 3 cut(s) | 650, 955, 3514 |
| NdeI | CATATG | 2 cut(s) | 1996, 4121 |
| NmeAIII | GCCGAG | 1 cut(s) | 596 |
| NmuCI | GTSAC | 6 cut(s) | 138, 946, 1104, 2563, 3321, 3916 |
| NsiI | ATGCAT | 5 cut(s) | 2594, 2693, 2962, 3730, 4078 |
| NspI | RCATGY | 9 cut(s) | 56, 264, 388, 833, 1112, 1632, 2872, 3377, 3675 |
| OliI | CACNNNNGTG | 1 cut(s) | 1150 |
| PaeR7I | CTCGAG | 1 cut(s) | 3159 |
| PceI | AGGCCT | 1 cut(s) | 3768 |
| PciI | ACATGT | 2 cut(s) | 384, 1108 |
| PciSI | GCTCTTC | 2 cut(s) | 1251, 4045 |
| PctI | GAATGC | 4 cut(s) | 2456, 3421, 4090, 4115 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1260, 3278, 4054 |
| PfeI | GAWTC | 6 cut(s) | 1274, 1399, 2970, 3344, 3394, 4279 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2043, 2249 |
| PfoI | TCCNGGA | 1 cut(s) | 3065 |
| PleI | GAGTC | 1 cut(s) | 2560 |
| PpsI | GAGTC | 1 cut(s) | 2560 |
| Ppu21I | YACGTR | 1 cut(s) | 3630 |
| PpuMI | RGGWCCY | 2 cut(s) | 229, 2882 |
| PscI | ACATGT | 2 cut(s) | 384, 1108 |
| PshBI | ATTAAT | 1 cut(s) | 3474 |
| PsiI | TTATAA | 4 cut(s) | 1533, 1905, 3330, 3773 |
| Psp5II | RGGWCCY | 2 cut(s) | 229, 2882 |
| Psp6I | CCWGG | 6 cut(s) | 231, 321, 979, 2663, 3059, 3065 |
| PspFI | CCCAGC | 2 cut(s) | 1506, 3571 |
| PspGI | CCWGG | 6 cut(s) | 231, 321, 979, 2663, 3059, 3065 |
| PspOMI | GGGCCC | 1 cut(s) | 2660 |
| PspPI | GGNCC | 9 cut(s) | 229, 1155, 2240, 2289, 2425, 2660, 2661, 2882, 3063 |
| PspPPI | RGGWCCY | 2 cut(s) | 229, 2882 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2494, 2526 |
| PstI | CTGCAG | 1 cut(s) | 772 |
| PstNI | CAGNNNCTG | 4 cut(s) | 1064, 2188, 3386, 3557 |
| PvuII | CAGCTG | 2 cut(s) | 998, 3571 |
| RseI | CAYNNNNRTG | 7 cut(s) | 147, 306, 1150, 1409, 2388, 2696, 4120 |
| SapI | GCTCTTC | 2 cut(s) | 1251, 4045 |
| Sau96I | GGNCC | 9 cut(s) | 229, 1155, 2240, 2289, 2425, 2660, 2661, 2882, 3063 |
| ScaI | AGTACT | 1 cut(s) | 2722 |
| SchI | GAGTC | 1 cut(s) | 2560 |
| ScrFI | CCNGG | 7 cut(s) | 233, 323, 981, 2407, 2665, 3061, 3067 |
| SduI | GDGCHC | 5 cut(s) | 1895, 2486, 2664, 3618, 4336 |
| SfcI | CTRYAG | 3 cut(s) | 420, 768, 2220 |
| Sfr274I | CTCGAG | 1 cut(s) | 3159 |
| SinI | GGWCC | 6 cut(s) | 229, 1155, 2240, 2289, 2882, 3063 |
| SlaI | CTCGAG | 1 cut(s) | 3159 |
| SmiI | ATTTAAAT | 1 cut(s) | 1851 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 147, 306, 1150, 1409, 2388, 2696, 4120 |
| SmlI | CTYRAG | 6 cut(s) | 2053, 2633, 3159, 3506, 3787, 4337 |
| SmoI | CTYRAG | 6 cut(s) | 2053, 2633, 3159, 3506, 3787, 4337 |
| SpeI | ACTAGT | 1 cut(s) | 521 |
| SseBI | AGGCCT | 1 cut(s) | 3768 |
| SspMI | CTAG | 6 cut(s) | 522, 1767, 1814, 2112, 4188, 4283 |
| StuI | AGGCCT | 1 cut(s) | 3768 |
| StyD4I | CCNGG | 7 cut(s) | 231, 321, 979, 2405, 2663, 3059, 3065 |
| StyI | CCWWGG | 7 cut(s) | 650, 955, 2903, 3229, 3364, 3514, 3656 |
| SwaI | ATTTAAAT | 1 cut(s) | 1851 |
| TaiI | ACGT | 4 cut(s) | 721, 2536, 3632, 4094 |
| TaqI | TCGA | 3 cut(s) | 173, 2554, 3160 |
| TatI | WGTACW | 6 cut(s) | 90, 98, 2720, 2871, 3168, 3801 |
| TauI | GCSGC | 3 cut(s) | 419, 449, 3082 |
| TfiI | GAWTC | 6 cut(s) | 1274, 1399, 2970, 3344, 3394, 4279 |
| TscAI | CASTG | 7 cut(s) | 540, 955, 1152, 1807, 2048, 3080, 3346 |
| TseFI | GTSAC | 6 cut(s) | 138, 946, 1104, 2563, 3321, 3916 |
| Tsp45I | GTSAC | 6 cut(s) | 138, 946, 1104, 2563, 3321, 3916 |
| TspGWI | ACGGA | 1 cut(s) | 2790 |
| TspRI | CASTG | 7 cut(s) | 540, 955, 1152, 1807, 2048, 3080, 3346 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2043, 2249 |
| Vha464I | CTTAAG | 1 cut(s) | 2053 |
| VneI | GTGCAC | 1 cut(s) | 3614 |
| VpaK11BI | GGWCC | 6 cut(s) | 229, 1155, 2240, 2289, 2882, 3063 |
| VspI | ATTAAT | 1 cut(s) | 3474 |
| XbaI | TCTAGA | 1 cut(s) | 4282 |
| XceI | RCATGY | 9 cut(s) | 56, 264, 388, 833, 1112, 1632, 2872, 3377, 3675 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 460, 3387, 4326 |
| XhoI | CTCGAG | 1 cut(s) | 3159 |
| XmiI | GTMKAC | 3 cut(s) | 2648, 3031, 4263 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1260, 3278, 4054 |
| XspI | CTAG | 6 cut(s) | 522, 1767, 1814, 2112, 4188, 4283 |
| ZrmI | AGTACT | 1 cut(s) | 2722 |
| Zsp2I | ATGCAT | 5 cut(s) | 2594, 2693, 2962, 3730, 4078 |