RchiOBHm_Chr7g0207941

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
25270906 .. 25285830
14925 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ18609

Sequence Viewer

Length: 4308 bp
ATGTCTCCATCACAATTGAAATGGTACACTTGGTTTTGTATTCTGGTGGGGCATGTTTGCATTTTTGCCCTGTCCCTTACTTCAGGGCAGTACAGAAGTACAGGCACCATGTCAGAAGAGTGGATGAAAGGTTTGGGGTCACATATAAGTGATGGCTTTGAAAGCAGCACTTCGACTTATGTGGTAACAATGTTATCATCTCCATTAAATGAACCAGTATCTTGTGAGGACCTGGAAGGTGTTGGATCATTCAATACCACATGCTTGTTAAACTCAAACTTCTCTTTGAATTCTGATCTTCACATACATGGTACTGGAAACCTGGAGATACTCCCTCATGTATCAATTATTTGTCCGATTGAAGGCTGCATGATTACATTCAACATGTCTGGAAATGTTAAAATTGGTCAATATGCGGCTATAGTTGCTGGTTCTGTGGTTTTTGCGGCTGCCAATCTGACAATGGGGTATAATTCTTCTATAAATACAACATCTTTGGGTGGACTACCGCCTTCTCAAACTAGTGGAACTCCAGTGGGCTATGATGGAGGTGGTGGAGGGCATGGTGGCCGAGGTGCTTCTTGCTTGAAAAATAATCAGACGAGCTTTTGGGGTGGTGATGTTTATACTTGGTCAAAATTGTCCGAGCCATGGAGTTATGGGAGCAAGGGTGGAGGCACATCTACTAAAATTCCATTTGGAGGAAATGGTGGAGGACGTGTCAAGCTTCAAGTGAAGGATATGTTATATCTAAATGGATCTGTAACTGCAGAAGGAGGGGACGGCGGAACAACTGGTGGAGGAGGATCTGGTGGAAGTATTTTTATACATGCTGTTAAGTTGAAGGGATACGGTACAATAAGTGCTGCTGGTGGAAGAGGATGGGGTGGAGGTGGTGGTGGAAGAATATCACTTGATTGTTACAGCATACAAGAAGATGTAAAAGTCACTGTCCATGGTGGTTTAAGTATTGGCTGTCCTGGGAATTCTGGAGCAGCTGGCACATACTTTAATGCAGATCTGCTTAGTTTAAGAGTTGGAAATGACAATATCACAACAGAAACTGAAACCCCATTGCTTGATTTTTCTACCAGCCCATTATGGTCACATGTTTTTGTGGAGAATAGCGCAAAAGTGTTGGTTCCACTGCTGTGGACCAGAGTTCAGGTGAGAGGCCAAGTTAGTTTATACCGTGGAGGCAGCATCATCTTTGGACTGTCTGAGTTTCCAGTTTCCGAATTTGAACTTGTTGCTGAAGAGCTTCTGATGAGTGATTCCATCATAAAGGTTTTTGGTGCATTTAGAGTTGCTGTCAAGATGTTACTCATGTGGAACTCCAGAATTGAAATAAATGGCGGTGGAAATACCATTGTTACTTCTTCAGTTCTTGAAGTTAGGAATCTCATTGAAATGAGGCATAAGTCTGTCATTAGTTCAAATAAAAACTTGGGTGTTTATGGTCAAGGACTACTGAAGTTGACTGATCATGGTGATACAATAAAAGCCCAGCGTCTTTCTTTGTCTCTCTTTTATAACATAACTGTTGGTGCTGGTTCTTTACTTCAGGCTCCAATGGATGATGATGCAAGCCGAAAAGTGGTAACAAAATCCCTATGCGAGAGTGAGACATGCCCGTTGGATTTGATTACCCCACCAGATGATTGCCATGTCAATTATACACTCTCCTTTTCACTTCAAATTTGTCGCGTAGAGGATCTTCTTGTTCATGGCGTTGTCAAGGGAAGTGTTGTCCACATCCACAGGGCTAGGACTATTATTATTGCTACTGACGGCCGGATCAGTGCATCTGAACTAGGTTGCAGTAAAGGTATTGGAAAGGGAAACTATTTAAATGGAGCTGGTAGTGGTGCTGGACATGGGGGAAGAGGGGGCTCGGGTTATTATAATGGGAGGGTGAGCAATGGCGGTAATGAATATGGTGATGCTAATTTCCCGTGTGAATTAGGGAGTGGAGCTGAGGGTGCCAATCAGTCATATGGAAATGTGGTAGGAGGGGGAATGATTGTGATGGGATCCATCCAGTGGCCACTCTTAAGGCTTGATGTCTATGGATCTTTGAGTGCTGATGGTCAAAGCTTTGATAAGGCAGCTAGAAACAGTAATGGTTCTATAATTGGCGGGCTTGGTGGAGGTTCAGGTGGGACAATCCTTCTTTTCCTTCAGGAGCTGAGGTGGTCCACGAGGTGGGGGTGGGGTGGGGGTGGAAGAGTTCATTTTCATTGGTCCAAGATAGAATTCAGGGATGAATATACTCCATTTGCGAGTATAAGTGGCTCCATTAACAAAAGTGGAGGTAATGGAGATGATGGAGGTAGTCATGGATATGATGGAACTATCACCGGGAAGAAATGCCCTAAGGGCCTTTATGGCACCTTCTGCAAGGAATGCCCTGTTGGCACATATAAAAATGTTGAGGGCTCTGATGCTCATCTTTGTATTCCTTGTTCTGTTGACCTTCTTCCACGACGTGCTGAATTCATTTATGTTCGAGGCGGGGTGACTCGTCCATCGTGTCCTTACAAATGCATATCTGACAAATATAGGATGCCAAAATGCTATACTCCTCTTGAGGAGCTTTTGTATACCTTTGGGGGGCCCTGGCCTTTTGCAATTTTATTGTCATGCATTTTGGTGCTTCTGGGTCTGTTATTAAGTACTTTGAGAATTAAACTTGTTGGATCATGCTCTCACGATAGAGCTGGTTCAGTTGAAGACCATAATCGTCATCGTTTTCCGTCTCTTCTTTCCTTATCTGAGGTGCGAGGAACCCGAGTTGAAGAAACTCAAAGCCATGTTCATCGCATGTACTTCATGGGTCCTAATACATTCAGAGAACCTTGGCATCTTCCTTATTCTCCTCCAGATGCAATCATTGAAATTGTGTATGAAGATGCATTTAACAGATTCATTGATGAGATCAATTCTGTGGCTGCTTATGACTGGTGGGAAGGGTCTGTTCATAGTATACTTTCAATTCTCGCATATCCTTGTTCCTGGTCCTGGAAACAGTGGCGGCAAAGAAATAAAATTCATCGCCTTCAGGAATATGTAAAGTCTGAATATGACCATTCGTGTCTCCGCTCTTGCAGATCTCGAGCCTTGTACAAAGGGATGAAGGTTGGAGCAACGCCAGACTTGATGGTAGCATATATTGATTTTTTCCTTGGTGGTGATGAGAAGCGTCTGGAATTGGTATCAATCATCCAGAAGAGGTTCCCCATGTGCATAATCTTTGGTGGTGATGGAAGCTATATGTCACCTTATAATCTTCACAGTGATTCATTGTTGACCAATCTCCTTGGCCAGCATGTCCCAGAAACTGTTTGGAATCATTTGGTGGCTGGTTTGAATGCTCAGTTGAGGATGGTGAGGCATGGATCTATTCGTACTCACCTAATTCCTGTTATTAATTGGATAAATAGCCACGCAAACCCTCAACTTGAGTTCCATGGGGTTAAAATTGAGCTTTTATGGTTTCAAGCAACAGCTTCTGGTTATTATCAGCTGGGGATATTGGTAGTAGTTGGAGATTATCCTCTTCAAAGTGTGCACCAGTTGAATACGTGGGATAGAAGTGATAATGAGCTGCCAAGGTCAAATTCTGCATGTGCAAGAAAGTGTCTAAAGCAAATGCAGCAAAGTTGGCCGTATGCAGGTCATGCATTATCAATTAAAAGGATAACTGGAGGAATAAATGGAGGCCTTATAAATCATACTACCTTGAGATCTATGGAGTACAAAAAGGATTTCCTCTTTCCACTTTCTCTTCTACTGAACAATACAAGACCTATTGGCCGTCAGGACACCCTGCTGCTGCTGATAAGTGTCATGCTTTTAGCAGACCTATCTGTCACCCTTCTCATGTTGCTTCAATACTATTGGATTTCTCTTGGGGCTTTTCTTGCTGTCTTGCTTATACTACCTCTATCTCTACTTTCTCCCTTCCTTGCTGGATTGAGTGCCTTATTCAGTAAGGAAAATAGAAGAGCTTCACTTGCTCGGGTATATGCATTGTGGAATGCTACGTCCCTGTCTAACATTGTGGTTGCATTCATATGTGGCATTTTCCATTATAGCTTTTCCTTTTTCCAGCCACCTGACCAGTCAAATACATGGAACACTAGGAGGGAGGATGATAAATGGTGGCTTTTGCCAACTGTTCTTCTGCTGTTCAAGTTAATACAAGCCCGTTTTGTAGACTGGCACATAGCGAATCTAGAAATTCAAGATTATTCATTATTTTGCCCAGATCCAGATGCCTTCTGGGCACTTGAGGCTGGCACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1435

Amino Acids

156.38

Weight (kDa)

7.22

Isoelectric Point (pI)

40.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF8003 PF26010 786 - 860 7.7e-35 Domain of unknown function (DUF8003)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 1533, 1905, 3285, 3728
AasI GACNNNNNNGTC 1 cut(s) 3869
Acc36I ACCTGC 1 cut(s) 3665
AccB1I GGYRCC 3 cut(s) 104, 1982, 2390
AccB7I CCANNNNNTGG 2 cut(s) 2043, 2205
AccBSI CCGCTC 1 cut(s) 3102
AccI GTMKAC 3 cut(s) 2603, 2986, 4218
AccII CGCG 1 cut(s) 1707
AcoI YGGCCR 6 cut(s) 568, 1792, 2045, 3322, 3665, 3814
AcuI CTGAAG 7 cut(s) 66, 1275, 1365, 1493, 1547, 2165, 3044
AdeI CACNNNGTG 2 cut(s) 2205, 2489
AfiI CCNNNNNNNGG 9 cut(s) 362, 651, 701, 1597, 2043, 2205, 2613, 3021, 3674
AflII CTTAAG 1 cut(s) 2053
AflIII ACRYGT 3 cut(s) 384, 718, 1108
AhlI ACTAGT 1 cut(s) 521
AjiI CACGTC 2 cut(s) 719, 2489
AjnI CCWGG 6 cut(s) 231, 321, 979, 2618, 3014, 3020
AjuI GAANNNNNNNTTGG 6 cut(s) 2240, 2272, 2397, 2429, 3604, 3636
AleI CACNNNNGTG 1 cut(s) 1150
Alw21I GWGCWC 1 cut(s) 3573
Alw26I GTCTC 5 cut(s) 9, 1527, 1619, 2763, 3101
Alw44I GTGCAC 1 cut(s) 3569
AlwNI CAGNNNCTG 4 cut(s) 1064, 2188, 3341, 3512
Ama87I CYCGRG 4 cut(s) 1894, 2790, 3114, 4020
ApaI GGGCCC 1 cut(s) 2619
ApaLI GTGCAC 1 cut(s) 3569
AseI ATTAAT 1 cut(s) 3429
Asp700I GAANNNNTTC 3 cut(s) 1260, 3233, 4009
AspLEI GCGC 1 cut(s) 1130
AspS9I GGNCC 9 cut(s) 229, 1155, 2196, 2244, 2380, 2615, 2616, 2837, 3018
AsuC2I CCSGG 1 cut(s) 2362
AvaI CYCGRG 4 cut(s) 1894, 2790, 3114, 4020
AvaII GGWCC 6 cut(s) 229, 1155, 2196, 2244, 2837, 3018
AxyI CCTNAGG 1 cut(s) 2376
BaeGI GKGCMC 3 cut(s) 2619, 3573, 4291
BalI TGGCCA 2 cut(s) 2047, 3324
BamHI GGATCC 1 cut(s) 2033
BanI GGYRCC 3 cut(s) 104, 1982, 2390
BanII GRGCYC 3 cut(s) 1895, 2441, 2619
BarI GAAGNNNNNNTAC 2 cut(s) 1701, 1733
BauI CACGAG 1 cut(s) 2200
BbsI GAAGAC 1 cut(s) 2739
Bbv12I GWGCWC 1 cut(s) 3573
BbvCI CCTCAGC 2 cut(s) 1977, 2189
BceAI ACGGC 4 cut(s) 799, 1807, 3652, 3801
BciT130I CCWGG 6 cut(s) 233, 323, 981, 2620, 3016, 3022
BciVI GTATCC 1 cut(s) 842
BclI TGATCA 1 cut(s) 1483
BcnI CCSGG 1 cut(s) 2362
BcoDI GTCTC 5 cut(s) 9, 1527, 1619, 2763, 3101
BcuI ACTAGT 1 cut(s) 521
BfaI CTAG 6 cut(s) 522, 1767, 1814, 2112, 4143, 4238
BfmI CTRYAG 2 cut(s) 420, 768
BfrI CTTAAG 1 cut(s) 2053
BfuAI ACCTGC 1 cut(s) 3665
BfuI GTATCC 1 cut(s) 842
BglI GCCNNNNNGGC 4 cut(s) 2379, 2388, 2415, 4286
BglII AGATCT 3 cut(s) 1018, 3110, 3746
BmcAI AGTACT 1 cut(s) 2677
Bme1390I CCNGG 7 cut(s) 233, 323, 981, 2362, 2620, 3016, 3022
Bme18I GGWCC 6 cut(s) 229, 1155, 2196, 2244, 2837, 3018
BmeT110I CYCGRG 4 cut(s) 1894, 2790, 3114, 4020
BmgBI CACGTC 2 cut(s) 719, 2489
BmgT120I GGNCC 9 cut(s) 229, 1155, 2196, 2244, 2380, 2615, 2616, 2837, 3018
BmrFI CCNGG 7 cut(s) 233, 323, 981, 2362, 2620, 3016, 3022
BpiI GAAGAC 1 cut(s) 2739
BpmI CTGGAG 6 cut(s) 344, 516, 1011, 1321, 2865, 3726
Bpu10I CCTNAGC 2 cut(s) 1977, 2189
BpuEI CTTGAG 3 cut(s) 2609, 3482, 3763
BpuMI CCSGG 1 cut(s) 2362
BsaAI YACGTR 1 cut(s) 3585
BsaBI GATNNNNATC 1 cut(s) 2448
BsaXI ACNNNNNCTCC 8 cut(s) 655, 685, 705, 735, 2177, 2207, 2585, 2615
Bsc4I CCNNNNNNNGG 9 cut(s) 362, 651, 701, 1597, 2043, 2205, 2613, 3021, 3674
Bse21I CCTNAGG 1 cut(s) 2376
Bse3DI GCAATG 2 cut(s) 1073, 1927
Bse8I GATNNNNATC 1 cut(s) 2448
BseBI CCWGG 6 cut(s) 233, 323, 981, 2620, 3016, 3022
BseJI GATNNNNATC 1 cut(s) 2448
BseLI CCNNNNNNNGG 9 cut(s) 362, 651, 701, 1597, 2043, 2205, 2613, 3021, 3674
BseMI GCAATG 2 cut(s) 1073, 1927
BseMII CTCAG 5 cut(s) 1212, 1968, 2180, 2766, 3389
BseRI GAGGAG 4 cut(s) 816, 2574, 2606, 2868
BseSI GKGCMC 3 cut(s) 2619, 3573, 4291
BseX3I CGGCCG 1 cut(s) 1792
BseYI CCCAGC 2 cut(s) 1506, 3526
Bsh1236I CGCG 1 cut(s) 1707
Bsh1285I CGRYCG 1 cut(s) 1795
BshNI GGYRCC 3 cut(s) 104, 1982, 2390
BsiEI CGRYCG 1 cut(s) 1795
BsiHKAI GWGCWC 1 cut(s) 3573
BsiHKCI CYCGRG 4 cut(s) 1894, 2790, 3114, 4020
BsiSI CCGG 2 cut(s) 1795, 2361
BslFI GGGAC 5 cut(s) 58, 794, 2176, 3317, 4033
BslI CCNNNNNNNGG 9 cut(s) 362, 651, 701, 1597, 2043, 2205, 2613, 3021, 3674
BsmAI GTCTC 5 cut(s) 9, 1527, 1619, 2763, 3101
BsmBI CGTCTC 1 cut(s) 2763
BsmFI GGGAC 5 cut(s) 58, 794, 2176, 3317, 4033
BsmI GAATGC 4 cut(s) 2411, 3376, 4045, 4070
BsoBI CYCGRG 4 cut(s) 1894, 2790, 3114, 4020
Bsp120I GGGCCC 1 cut(s) 2615
Bsp1286I GDGCHC 5 cut(s) 1895, 2441, 2619, 3573, 4291
Bsp1407I TGTACA 1 cut(s) 3123
Bsp19I CCATGG 3 cut(s) 650, 955, 3469
BspCNI CTCAG 5 cut(s) 1213, 1969, 2181, 2767, 3388
BspFNI CGCG 1 cut(s) 1707
BspMAI CTGCAG 1 cut(s) 772
BspMI ACCTGC 1 cut(s) 3665
BspQI GCTCTTC 2 cut(s) 1251, 4000
BspT107I GGYRCC 3 cut(s) 104, 1982, 2390
BspTI CTTAAG 1 cut(s) 2053
BsrBI CCGCTC 1 cut(s) 3102
BsrDI GCAATG 2 cut(s) 1073, 1927
BsrGI TGTACA 1 cut(s) 3123
BssNAI GTATAC 2 cut(s) 2604, 2987
BssSI CACGAG 1 cut(s) 2200
BssT1I CCWWGG 7 cut(s) 650, 955, 2858, 3184, 3319, 3469, 3611
Bst1107I GTATAC 2 cut(s) 2604, 2987
Bst2BI CACGAG 1 cut(s) 2200
Bst2UI CCWGG 6 cut(s) 233, 323, 981, 2620, 3016, 3022
BstAFI CTTAAG 1 cut(s) 2053
BstAPI GCANNNNNTGC 3 cut(s) 2397, 2406, 3680
BstAUI TGTACA 1 cut(s) 3123
BstBAI YACGTR 1 cut(s) 3585
BstC8I GCNNGC 5 cut(s) 1000, 1588, 2141, 3326, 4300
BstDEI CTNAG 7 cut(s) 1025, 1221, 1977, 2189, 2376, 2775, 3375
BstDSI CCRYGG 4 cut(s) 650, 955, 1192, 3469
BstFNI CGCG 1 cut(s) 1707
BstHHI GCGC 1 cut(s) 1130
BstMAI GTCTC 5 cut(s) 9, 1527, 1619, 2763, 3101
BstMCI CGRYCG 1 cut(s) 1795
BstNI CCWGG 6 cut(s) 233, 323, 981, 2620, 3016, 3022
BstNSI RCATGY 9 cut(s) 56, 264, 388, 833, 1112, 1632, 2827, 3332, 3630
BstSCI CCNGG 7 cut(s) 231, 321, 979, 2360, 2618, 3014, 3020
BstSFI CTRYAG 2 cut(s) 420, 768
BstSLI GKGCMC 3 cut(s) 2619, 3573, 4291
BstUI CGCG 1 cut(s) 1707
BstV2I GAAGAC 1 cut(s) 2739
BstXI CCANNNNNNTGG 1 cut(s) 1152
BstZ17I GTATAC 2 cut(s) 2604, 2987
BstZI CGGCCG 1 cut(s) 1792
Bsu36I CCTNAGG 1 cut(s) 2376
BsuI GTATCC 1 cut(s) 842
BtgI CCRYGG 4 cut(s) 650, 955, 1192, 3469
BtgZI GCGATG 2 cut(s) 2804, 3038
BtrI CACGTC 2 cut(s) 719, 2489
BtsI GCAGTG 1 cut(s) 1145
BtsIMutI CAGTG 7 cut(s) 540, 948, 1145, 1807, 2048, 3035, 3301
BveI ACCTGC 1 cut(s) 3665
Cac8I GCNNGC 5 cut(s) 1000, 1588, 2141, 3326, 4300
CaiI CAGNNNCTG 4 cut(s) 1064, 2188, 3341, 3512
CfoI GCGC 1 cut(s) 1130
Cfr13I GGNCC 9 cut(s) 229, 1155, 2196, 2244, 2380, 2615, 2616, 2837, 3018
CseI GACGC 2 cut(s) 1499, 3191
DdeI CTNAG 7 cut(s) 1025, 1221, 1977, 2189, 2376, 2775, 3375
DraI TTTAAA 1 cut(s) 1851
DraIII CACNNNGTG 2 cut(s) 2205, 2489
DrdI GACNNNNNNGTC 1 cut(s) 3869
DseDI GACNNNNNNGTC 1 cut(s) 3869
EaeI YGGCCR 6 cut(s) 568, 1792, 2045, 3322, 3665, 3814
EagI CGGCCG 1 cut(s) 1792
EciI GGCGGA 1 cut(s) 801
EclXI CGGCCG 1 cut(s) 1792
Eco130I CCWWGG 7 cut(s) 650, 955, 2858, 3184, 3319, 3469, 3611
Eco147I AGGCCT 1 cut(s) 3723
Eco24I GRGCYC 3 cut(s) 1895, 2441, 2619
Eco47I GGWCC 6 cut(s) 229, 1155, 2196, 2244, 2837, 3018
Eco52I CGGCCG 1 cut(s) 1792
Eco57I CTGAAG 7 cut(s) 66, 1275, 1365, 1493, 1547, 2165, 3044
Eco81I CCTNAGG 1 cut(s) 2376
Eco88I CYCGRG 4 cut(s) 1894, 2790, 3114, 4020
EcoO109I RGGNCCY 5 cut(s) 229, 2380, 2615, 2616, 2837
EcoRI GAATTC 4 cut(s) 289, 985, 2255, 2495
EcoRII CCWGG 6 cut(s) 231, 321, 979, 2618, 3014, 3020
EcoT14I CCWWGG 7 cut(s) 650, 955, 2858, 3184, 3319, 3469, 3611
EcoT22I ATGCAT 5 cut(s) 2549, 2648, 2917, 3685, 4033
EcoT38I GRGCYC 3 cut(s) 1895, 2441, 2619
ErhI CCWWGG 7 cut(s) 650, 955, 2858, 3184, 3319, 3469, 3611
Esp3I CGTCTC 1 cut(s) 2763
FalI AAGNNNNNCTT 2 cut(s) 154, 186
FaqI GGGAC 5 cut(s) 58, 794, 2176, 3317, 4033
FauI CCCGC 2 cut(s) 2132, 2507
FauNDI CATATG 2 cut(s) 1996, 4076
FbaI TGATCA 1 cut(s) 1483
FblI GTMKAC 3 cut(s) 2603, 2986, 4218
FriOI GRGCYC 3 cut(s) 1895, 2441, 2619
FspBI CTAG 6 cut(s) 522, 1767, 1814, 2112, 4143, 4238
GlaI GCGC 1 cut(s) 1129
GsaI CCCAGC 2 cut(s) 1510, 3530
GsuI CTGGAG 6 cut(s) 344, 516, 1011, 1321, 2865, 3726
HapII CCGG 2 cut(s) 1795, 2361
HgaI GACGC 2 cut(s) 1499, 3191
HhaI GCGC 1 cut(s) 1130
Hin6I GCGC 1 cut(s) 1128
HinP1I GCGC 1 cut(s) 1128
HincII GTYRAC 3 cut(s) 1479, 2473, 3309
HindII GTYRAC 3 cut(s) 1479, 2473, 3309
HindIII AAGCTT 2 cut(s) 725, 2095
HinfI GANTC 7 cut(s) 1274, 1399, 2521, 2925, 3299, 3349, 4234
HpaII CCGG 2 cut(s) 1795, 2361
Hpy99I CGWCG 1 cut(s) 2490
HpyCH4IV ACGT 4 cut(s) 718, 2488, 3584, 4046
HpyF3I CTNAG 7 cut(s) 1025, 1221, 1977, 2189, 2376, 2775, 3375
HpySE526I ACGT 4 cut(s) 718, 2488, 3584, 4046
HspAI GCGC 1 cut(s) 1128
Ksp22I TGATCA 1 cut(s) 1483
LguI GCTCTTC 2 cut(s) 1251, 4000
LmnI GCTCC 9 cut(s) 663, 992, 1573, 1856, 1973, 2185, 2300, 2593, 3143
MaeI CTAG 6 cut(s) 522, 1767, 1814, 2112, 4143, 4238
MaeII ACGT 4 cut(s) 718, 2488, 3584, 4046
MbiI CCGCTC 1 cut(s) 3102
MfeI CAATTG 1 cut(s) 14
MhlI GDGCHC 5 cut(s) 1895, 2441, 2619, 3573, 4291
MlsI TGGCCA 2 cut(s) 2047, 3324
MluNI TGGCCA 2 cut(s) 2047, 3324
MlyI GAGTC 1 cut(s) 2515
MmeI TCCRAC 6 cut(s) 223, 1018, 1617, 2677, 3121, 3526
Mox20I TGGCCA 2 cut(s) 2047, 3324
Mph1103I ATGCAT 5 cut(s) 2549, 2648, 2917, 3685, 4033
MroXI GAANNNNTTC 3 cut(s) 1260, 3233, 4009
MscI TGGCCA 2 cut(s) 2047, 3324
MslI CAYNNNNRTG 7 cut(s) 147, 306, 1150, 1409, 2343, 2651, 4075
Msp20I TGGCCA 2 cut(s) 2047, 3324
MspA1I CMGCKG 2 cut(s) 998, 3526
MspCI CTTAAG 1 cut(s) 2053
MspI CCGG 2 cut(s) 1795, 2361
MspR9I CCNGG 7 cut(s) 233, 323, 981, 2362, 2620, 3016, 3022
MunI CAATTG 1 cut(s) 14
Mva1269I GAATGC 4 cut(s) 2411, 3376, 4045, 4070
MvaI CCWGG 6 cut(s) 233, 323, 981, 2620, 3016, 3022
MvnI CGCG 1 cut(s) 1707
NciI CCSGG 1 cut(s) 2362
NcoI CCATGG 3 cut(s) 650, 955, 3469
NdeI CATATG 2 cut(s) 1996, 4076
NmeAIII GCCGAG 1 cut(s) 596
NmuCI GTSAC 6 cut(s) 138, 946, 1104, 2518, 3276, 3871
NsiI ATGCAT 5 cut(s) 2549, 2648, 2917, 3685, 4033
NspI RCATGY 9 cut(s) 56, 264, 388, 833, 1112, 1632, 2827, 3332, 3630
OliI CACNNNNGTG 1 cut(s) 1150
PaeR7I CTCGAG 1 cut(s) 3114
PceI AGGCCT 1 cut(s) 3723
PciI ACATGT 2 cut(s) 384, 1108
PciSI GCTCTTC 2 cut(s) 1251, 4000
PctI GAATGC 4 cut(s) 2411, 3376, 4045, 4070
PdmI GAANNNNTTC 3 cut(s) 1260, 3233, 4009
PfeI GAWTC 6 cut(s) 1274, 1399, 2925, 3299, 3349, 4234
PflMI CCANNNNNTGG 2 cut(s) 2043, 2205
PfoI TCCNGGA 1 cut(s) 3020
PleI GAGTC 1 cut(s) 2515
PpsI GAGTC 1 cut(s) 2515
Ppu21I YACGTR 1 cut(s) 3585
PpuMI RGGWCCY 2 cut(s) 229, 2837
PscI ACATGT 2 cut(s) 384, 1108
PshBI ATTAAT 1 cut(s) 3429
PsiI TTATAA 4 cut(s) 1533, 1905, 3285, 3728
Psp5II RGGWCCY 2 cut(s) 229, 2837
Psp6I CCWGG 6 cut(s) 231, 321, 979, 2618, 3014, 3020
PspFI CCCAGC 2 cut(s) 1506, 3526
PspGI CCWGG 6 cut(s) 231, 321, 979, 2618, 3014, 3020
PspOMI GGGCCC 1 cut(s) 2615
PspPI GGNCC 9 cut(s) 229, 1155, 2196, 2244, 2380, 2615, 2616, 2837, 3018
PspPPI RGGWCCY 2 cut(s) 229, 2837
PsrI GAACNNNNNNTAC 2 cut(s) 2449, 2481
PstI CTGCAG 1 cut(s) 772
PstNI CAGNNNCTG 4 cut(s) 1064, 2188, 3341, 3512
PvuII CAGCTG 2 cut(s) 998, 3526
RseI CAYNNNNRTG 7 cut(s) 147, 306, 1150, 1409, 2343, 2651, 4075
SapI GCTCTTC 2 cut(s) 1251, 4000
Sau96I GGNCC 9 cut(s) 229, 1155, 2196, 2244, 2380, 2615, 2616, 2837, 3018
ScaI AGTACT 1 cut(s) 2677
SchI GAGTC 1 cut(s) 2515
ScrFI CCNGG 7 cut(s) 233, 323, 981, 2362, 2620, 3016, 3022
SduI GDGCHC 5 cut(s) 1895, 2441, 2619, 3573, 4291
SfcI CTRYAG 2 cut(s) 420, 768
Sfr274I CTCGAG 1 cut(s) 3114
SinI GGWCC 6 cut(s) 229, 1155, 2196, 2244, 2837, 3018
SlaI CTCGAG 1 cut(s) 3114
SmiI ATTTAAAT 1 cut(s) 1851
SmiMI CAYNNNNRTG 7 cut(s) 147, 306, 1150, 1409, 2343, 2651, 4075
SmlI CTYRAG 6 cut(s) 2053, 2588, 3114, 3461, 3742, 4292
SmoI CTYRAG 6 cut(s) 2053, 2588, 3114, 3461, 3742, 4292
SpeI ACTAGT 1 cut(s) 521
SseBI AGGCCT 1 cut(s) 3723
SspMI CTAG 6 cut(s) 522, 1767, 1814, 2112, 4143, 4238
StuI AGGCCT 1 cut(s) 3723
StyD4I CCNGG 7 cut(s) 231, 321, 979, 2360, 2618, 3014, 3020
StyI CCWWGG 7 cut(s) 650, 955, 2858, 3184, 3319, 3469, 3611
SwaI ATTTAAAT 1 cut(s) 1851
TaiI ACGT 4 cut(s) 721, 2491, 3587, 4049
TaqI TCGA 3 cut(s) 173, 2509, 3115
TatI WGTACW 6 cut(s) 90, 98, 2675, 2826, 3123, 3756
TauI GCSGC 3 cut(s) 419, 449, 3037
TfiI GAWTC 6 cut(s) 1274, 1399, 2925, 3299, 3349, 4234
TscAI CASTG 7 cut(s) 540, 955, 1152, 1807, 2048, 3035, 3301
TseFI GTSAC 6 cut(s) 138, 946, 1104, 2518, 3276, 3871
Tsp45I GTSAC 6 cut(s) 138, 946, 1104, 2518, 3276, 3871
TspGWI ACGGA 1 cut(s) 2745
TspRI CASTG 7 cut(s) 540, 955, 1152, 1807, 2048, 3035, 3301
Van91I CCANNNNNTGG 2 cut(s) 2043, 2205
Vha464I CTTAAG 1 cut(s) 2053
VneI GTGCAC 1 cut(s) 3569
VpaK11BI GGWCC 6 cut(s) 229, 1155, 2196, 2244, 2837, 3018
VspI ATTAAT 1 cut(s) 3429
XbaI TCTAGA 1 cut(s) 4237
XceI RCATGY 9 cut(s) 56, 264, 388, 833, 1112, 1632, 2827, 3332, 3630
XcmI CCANNNNNNNNNTGG 3 cut(s) 460, 3342, 4281
XhoI CTCGAG 1 cut(s) 3114
XmiI GTMKAC 3 cut(s) 2603, 2986, 4218
XmnI GAANNNNTTC 3 cut(s) 1260, 3233, 4009
XspI CTAG 6 cut(s) 522, 1767, 1814, 2112, 4143, 4238
ZrmI AGTACT 1 cut(s) 2677
Zsp2I ATGCAT 5 cut(s) 2549, 2648, 2917, 3685, 4033
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.