Protein kinase domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G47850 |
| fragaria_vesca | FvH4_5g31410 |
| malus_domestica | MD15G1404800.v1.1 |
| prunus_persica | Prupe.1G556500_v2.0.a1 |
| pyrus_communis | pycom08g18820 pycom15g36220 |
| rosa_chinensis | RchiOBHm_Chr7g0223691 RchiOBHm_Chr7g0226681 |
| rosa_laevigata | RLG00000001707 |
| rosa_multiflora | Rmu_sc0000816.1_g000029 Rmu_sc0001903.1_g000021 |
| rosa_roxburghii | Rroxscaffold_3G00232510 Rroxscaffold_3G00237430 |
| rosa_rugosa | Rorug07G0218800 Rorug07G0239200 |
| rosa_samantha | Rh7AG361600 Rh7AG387200 Rh7BG353100 Rh7BG373400 Rh7CG380200 Rh7CG406400 Rh7DG357000 Rh7DG385500 |
| rosa_wichuraiana | Rw7G030740 Rw7G032470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 632 |
| AatII | GACGTC | 3 cut(s) | 1201, 1399, 1833 |
| AccB1I | GGYRCC | 1 cut(s) | 429 |
| AccII | CGCG | 4 cut(s) | 280, 584, 1513, 1670 |
| AclI | AACGTT | 1 cut(s) | 1124 |
| AclWI | GGATC | 6 cut(s) | 604, 985, 1609, 1684, 1697, 1720 |
| AcoI | YGGCCR | 2 cut(s) | 464, 2199 |
| AcsI | RAATTY | 3 cut(s) | 187, 394, 877 |
| AcvI | CACGTG | 1 cut(s) | 668 |
| AcyI | GRCGYC | 5 cut(s) | 430, 1198, 1396, 1764, 1830 |
| AfaI | GTAC | 6 cut(s) | 452, 1583, 1589, 1861, 1886, 2022 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 908, 974 |
| AflII | CTTAAG | 1 cut(s) | 782 |
| AgeI | ACCGGT | 1 cut(s) | 209 |
| AgsI | TTSAA | 4 cut(s) | 167, 416, 1021, 1898 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 1400, 1741 |
| AjnI | CCWGG | 3 cut(s) | 526, 934, 1273 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1469, 1501 |
| Alw21I | GWGCWC | 3 cut(s) | 145, 375, 1253 |
| Alw26I | GTCTC | 7 cut(s) | 51, 109, 427, 564, 1450, 1837, 2222 |
| Alw44I | GTGCAC | 1 cut(s) | 1249 |
| AlwI | GGATC | 6 cut(s) | 604, 985, 1609, 1684, 1697, 1720 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 661 |
| Ama87I | CYCGRG | 1 cut(s) | 1235 |
| AoxI | GGCC | 6 cut(s) | 464, 818, 910, 1795, 2156, 2199 |
| ApaLI | GTGCAC | 1 cut(s) | 1249 |
| ApeKI | GCWGC | 6 cut(s) | 661, 1279, 1356, 1679, 1853, 2123 |
| ApoI | RAATTY | 3 cut(s) | 187, 394, 877 |
| AsiGI | ACCGGT | 1 cut(s) | 209 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 232, 1126 |
| AspLEI | GCGC | 2 cut(s) | 432, 1672 |
| AspS9I | GGNCC | 4 cut(s) | 365, 818, 938, 1811 |
| AsuC2I | CCSGG | 2 cut(s) | 391, 1880 |
| AsuHPI | GGTGA | 2 cut(s) | 1607, 1735 |
| AsuII | TTCGAA | 1 cut(s) | 220 |
| AsuNHI | GCTAGC | 1 cut(s) | 1306 |
| AvaI | CYCGRG | 1 cut(s) | 1235 |
| AvaII | GGWCC | 3 cut(s) | 365, 938, 1811 |
| BaeGI | GKGCMC | 1 cut(s) | 1253 |
| BamHI | GGATCC | 1 cut(s) | 1689 |
| BanI | GGYRCC | 1 cut(s) | 429 |
| BanII | GRGCYC | 2 cut(s) | 375, 1057 |
| BauI | CACGAG | 1 cut(s) | 1683 |
| BbrPI | CACGTG | 1 cut(s) | 668 |
| BbsI | GAAGAC | 2 cut(s) | 705, 1992 |
| Bbv12I | GWGCWC | 3 cut(s) | 145, 375, 1253 |
| BbvI | GCAGC | 6 cut(s) | 648, 1291, 1368, 1666, 1840, 2135 |
| BccI | CCATC | 7 cut(s) | 20, 116, 323, 714, 1025, 1316, 1385 |
| BceAI | ACGGC | 5 cut(s) | 479, 1164, 2125, 2143, 2229 |
| BciT130I | CCWGG | 3 cut(s) | 528, 936, 1275 |
| BciVI | GTATCC | 1 cut(s) | 2108 |
| BclI | TGATCA | 1 cut(s) | 534 |
| BcnI | CCSGG | 2 cut(s) | 391, 1880 |
| BcoDI | GTCTC | 7 cut(s) | 51, 109, 427, 564, 1450, 1837, 2222 |
| BfoI | RGCGCY | 1 cut(s) | 433 |
| BfrI | CTTAAG | 1 cut(s) | 782 |
| BfuI | GTATCC | 1 cut(s) | 2108 |
| BlpI | GCTNAGC | 1 cut(s) | 1419 |
| BmcAI | AGTACT | 1 cut(s) | 1886 |
| Bme1390I | CCNGG | 5 cut(s) | 391, 528, 936, 1275, 1880 |
| Bme18I | GGWCC | 3 cut(s) | 365, 938, 1811 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 1400, 1741 |
| BmeT110I | CYCGRG | 1 cut(s) | 1235 |
| BmgT120I | GGNCC | 4 cut(s) | 365, 818, 938, 1811 |
| BmiI | GGNNCC | 4 cut(s) | 431, 1691, 1812, 2217 |
| BmrFI | CCNGG | 5 cut(s) | 391, 528, 936, 1275, 1880 |
| BmsI | GCATC | 3 cut(s) | 1103, 1166, 2127 |
| BmtI | GCTAGC | 1 cut(s) | 1310 |
| BpiI | GAAGAC | 2 cut(s) | 705, 1992 |
| BpmI | CTGGAG | 1 cut(s) | 1967 |
| Bpu10I | CCTNAGC | 1 cut(s) | 369 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1419 |
| Bpu14I | TTCGAA | 1 cut(s) | 220 |
| BpuEI | CTTGAG | 2 cut(s) | 409, 906 |
| BpuMI | CCSGG | 2 cut(s) | 391, 1880 |
| BsaAI | YACGTR | 1 cut(s) | 668 |
| BsaBI | GATNNNNATC | 1 cut(s) | 274 |
| BsaHI | GRCGYC | 5 cut(s) | 430, 1198, 1396, 1764, 1830 |
| BsaI | GGTCTC | 2 cut(s) | 564, 2222 |
| BsaJI | CCNNGG | 7 cut(s) | 361, 461, 489, 703, 907, 1274, 1317 |
| BsaWI | WCCGGW | 4 cut(s) | 209, 887, 1335, 1720 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1940, 1970 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 908, 974 |
| Bse118I | RCCGGY | 2 cut(s) | 209, 1856 |
| Bse1I | ACTGG | 1 cut(s) | 174 |
| Bse3DI | GCAATG | 3 cut(s) | 483, 1003, 1092 |
| Bse8I | GATNNNNATC | 1 cut(s) | 274 |
| BseBI | CCWGG | 3 cut(s) | 528, 936, 1275 |
| BseDI | CCNNGG | 7 cut(s) | 361, 461, 489, 703, 907, 1274, 1317 |
| BseGI | GGATG | 4 cut(s) | 1118, 1327, 1396, 2044 |
| BseJI | GATNNNNATC | 1 cut(s) | 274 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 908, 974 |
| BseMI | GCAATG | 3 cut(s) | 483, 1003, 1092 |
| BseMII | CTCAG | 3 cut(s) | 360, 533, 1410 |
| BseNI | ACTGG | 1 cut(s) | 174 |
| BseRI | GAGGAG | 1 cut(s) | 22 |
| BseSI | GKGCMC | 1 cut(s) | 1253 |
| BseX3I | CGGCCG | 1 cut(s) | 464 |
| BseXI | GCAGC | 6 cut(s) | 648, 1291, 1368, 1666, 1840, 2135 |
| Bsh1236I | CGCG | 4 cut(s) | 280, 584, 1513, 1670 |
| Bsh1285I | CGRYCG | 1 cut(s) | 467 |
| BshFI | GGCC | 6 cut(s) | 466, 820, 912, 1797, 2158, 2201 |
| BshNI | GGYRCC | 1 cut(s) | 429 |
| BshTI | ACCGGT | 1 cut(s) | 209 |
| BsiEI | CGRYCG | 1 cut(s) | 467 |
| BsiHKAI | GWGCWC | 3 cut(s) | 145, 375, 1253 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1235 |
| BsiSI | CCGG | 8 cut(s) | 210, 390, 467, 888, 1336, 1721, 1857, 1880 |
| BslFI | GGGAC | 2 cut(s) | 660, 1459 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 908, 974 |
| BsmAI | GTCTC | 7 cut(s) | 51, 109, 427, 564, 1450, 1837, 2222 |
| BsmBI | CGTCTC | 2 cut(s) | 109, 1837 |
| BsmFI | GGGAC | 2 cut(s) | 660, 1459 |
| BsmI | GAATGC | 1 cut(s) | 959 |
| BsnI | GGCC | 6 cut(s) | 466, 820, 912, 1797, 2158, 2201 |
| Bso31I | GGTCTC | 2 cut(s) | 564, 2222 |
| BsoBI | CYCGRG | 1 cut(s) | 1235 |
| Bsp119I | TTCGAA | 1 cut(s) | 220 |
| Bsp1286I | GDGCHC | 4 cut(s) | 145, 375, 1057, 1253 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1419 |
| Bsp68I | TCGCGA | 1 cut(s) | 584 |
| BspANI | GGCC | 6 cut(s) | 466, 820, 912, 1797, 2158, 2201 |
| BspCNI | CTCAG | 3 cut(s) | 361, 532, 1411 |
| BspFNI | CGCG | 4 cut(s) | 280, 584, 1513, 1670 |
| BspHI | TCATGA | 1 cut(s) | 1702 |
| BspLI | GGNNCC | 4 cut(s) | 431, 1691, 1812, 2217 |
| BspOI | GCTAGC | 1 cut(s) | 1310 |
| BspPI | GGATC | 6 cut(s) | 604, 985, 1609, 1684, 1697, 1720 |
| BspQI | GCTCTTC | 1 cut(s) | 372 |
| BspT104I | TTCGAA | 1 cut(s) | 220 |
| BspT107I | GGYRCC | 1 cut(s) | 429 |
| BspTI | CTTAAG | 1 cut(s) | 782 |
| BspTNI | GGTCTC | 2 cut(s) | 564, 2222 |
| BsrDI | GCAATG | 3 cut(s) | 483, 1003, 1092 |
| BsrFI | RCCGGY | 2 cut(s) | 209, 1856 |
| BsrI | ACTGG | 1 cut(s) | 174 |
| BssAI | RCCGGY | 2 cut(s) | 209, 1856 |
| BssECI | CCNNGG | 7 cut(s) | 361, 461, 489, 703, 907, 1274, 1317 |
| BssNI | GRCGYC | 5 cut(s) | 430, 1198, 1396, 1764, 1830 |
| BssSI | CACGAG | 1 cut(s) | 1683 |
| BssT1I | CCWWGG | 2 cut(s) | 489, 907 |
| Bst2BI | CACGAG | 1 cut(s) | 1683 |
| Bst2UI | CCWGG | 3 cut(s) | 528, 936, 1275 |
| Bst6I | CTCTTC | 4 cut(s) | 372, 943, 1235, 1560 |
| BstACI | GRCGYC | 5 cut(s) | 430, 1198, 1396, 1764, 1830 |
| BstAFI | CTTAAG | 1 cut(s) | 782 |
| BstBAI | YACGTR | 1 cut(s) | 668 |
| BstBI | TTCGAA | 1 cut(s) | 220 |
| BstC8I | GCNNGC | 2 cut(s) | 443, 1308 |
| BstDEI | CTNAG | 6 cut(s) | 369, 519, 679, 1065, 1419, 2005 |
| BstDSI | CCRYGG | 4 cut(s) | 361, 461, 703, 1317 |
| BstEII | GGTNACC | 1 cut(s) | 212 |
| BstF5I | GGATG | 4 cut(s) | 1118, 1327, 1396, 2044 |
| BstFNI | CGCG | 4 cut(s) | 280, 584, 1513, 1670 |
| BstH2I | RGCGCY | 1 cut(s) | 433 |
| BstHHI | GCGC | 2 cut(s) | 432, 1672 |
| BstMAI | GTCTC | 7 cut(s) | 51, 109, 427, 564, 1450, 1837, 2222 |
| BstMCI | CGRYCG | 1 cut(s) | 467 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 379, 438, 520, 590, 778, 1362, 1676, 1951, 2201 |
| BstNI | CCWGG | 3 cut(s) | 528, 936, 1275 |
| BstPI | GGTNACC | 1 cut(s) | 212 |
| BstSCI | CCNGG | 5 cut(s) | 389, 526, 934, 1273, 1878 |
| BstSLI | GKGCMC | 1 cut(s) | 1253 |
| BstUI | CGCG | 4 cut(s) | 280, 584, 1513, 1670 |
| BstV1I | GCAGC | 6 cut(s) | 648, 1291, 1368, 1666, 1840, 2135 |
| BstV2I | GAAGAC | 2 cut(s) | 705, 1992 |
| BstX2I | RGATCY | 2 cut(s) | 1601, 1689 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 490, 1193 |
| BstYI | RGATCY | 2 cut(s) | 1601, 1689 |
| BstZI | CGGCCG | 1 cut(s) | 464 |
| BsuI | GTATCC | 1 cut(s) | 2108 |
| BsuRI | GGCC | 6 cut(s) | 466, 820, 912, 1797, 2158, 2201 |
| BtgI | CCRYGG | 4 cut(s) | 361, 461, 703, 1317 |
| BtgZI | GCGATG | 2 cut(s) | 565, 1932 |
| BtsCI | GGATG | 4 cut(s) | 1118, 1327, 1396, 2044 |
| BtsIMutI | CAGTG | 2 cut(s) | 618, 1168 |
| BtuMI | TCGCGA | 1 cut(s) | 584 |
| Cac8I | GCNNGC | 2 cut(s) | 443, 1308 |
| CaiI | CAGNNNCTG | 1 cut(s) | 661 |
| CciI | TCATGA | 1 cut(s) | 1702 |
| CfoI | GCGC | 2 cut(s) | 432, 1672 |
| Cfr10I | RCCGGY | 2 cut(s) | 209, 1856 |
| Cfr13I | GGNCC | 4 cut(s) | 365, 818, 938, 1811 |
| CseI | GACGC | 2 cut(s) | 1685, 1772 |
| CsiI | ACCWGGT | 1 cut(s) | 526 |
| Csp6I | GTAC | 6 cut(s) | 451, 1582, 1588, 1860, 1885, 2021 |
| CspAI | ACCGGT | 1 cut(s) | 209 |
| CviAII | CATG | 6 cut(s) | 1187, 1400, 1591, 1703, 1770, 2108 |
| CviQI | GTAC | 6 cut(s) | 451, 1582, 1588, 1860, 1885, 2021 |
| DdeI | CTNAG | 6 cut(s) | 369, 519, 679, 1065, 1419, 2005 |
| DinI | GGCGCC | 1 cut(s) | 431 |
| DraI | TTTAAA | 3 cut(s) | 186, 883, 1162 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 632 |
| DriI | GACNNNNNGTC | 2 cut(s) | 1400, 1741 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 632 |
| EaeI | YGGCCR | 2 cut(s) | 464, 2199 |
| EagI | CGGCCG | 1 cut(s) | 464 |
| Eam1104I | CTCTTC | 4 cut(s) | 372, 943, 1235, 1560 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 1400, 1741 |
| EarI | CTCTTC | 4 cut(s) | 372, 943, 1235, 1560 |
| Ecl136II | GAGCTC | 1 cut(s) | 373 |
| EclXI | CGGCCG | 1 cut(s) | 464 |
| Eco130I | CCWWGG | 2 cut(s) | 489, 907 |
| Eco147I | AGGCCT | 1 cut(s) | 912 |
| Eco24I | GRGCYC | 2 cut(s) | 375, 1057 |
| Eco31I | GGTCTC | 2 cut(s) | 564, 2222 |
| Eco32I | GATATC | 1 cut(s) | 276 |
| Eco47I | GGWCC | 3 cut(s) | 365, 938, 1811 |
| Eco52I | CGGCCG | 1 cut(s) | 464 |
| Eco53kI | GAGCTC | 1 cut(s) | 373 |
| Eco72I | CACGTG | 1 cut(s) | 668 |
| Eco88I | CYCGRG | 1 cut(s) | 1235 |
| Eco91I | GGTNACC | 1 cut(s) | 212 |
| EcoICRI | GAGCTC | 1 cut(s) | 373 |
| EcoO65I | GGTNACC | 1 cut(s) | 212 |
| EcoRII | CCWGG | 3 cut(s) | 526, 934, 1273 |
| EcoRV | GATATC | 1 cut(s) | 276 |
| EcoT14I | CCWWGG | 2 cut(s) | 489, 907 |
| EcoT38I | GRGCYC | 2 cut(s) | 375, 1057 |
| EgeI | GGCGCC | 1 cut(s) | 431 |
| EheI | GGCGCC | 1 cut(s) | 431 |
| ErhI | CCWWGG | 2 cut(s) | 489, 907 |
| Esp3I | CGTCTC | 2 cut(s) | 109, 1837 |
| FaeI | CATG | 6 cut(s) | 1190, 1403, 1594, 1706, 1773, 2111 |
| FaqI | GGGAC | 2 cut(s) | 660, 1459 |
| FatI | CATG | 6 cut(s) | 1186, 1399, 1590, 1702, 1769, 2107 |
| FbaI | TGATCA | 1 cut(s) | 534 |
| FokI | GGATG | 4 cut(s) | 1125, 1334, 1403, 2051 |
| FriOI | GRGCYC | 2 cut(s) | 375, 1057 |
| GlaI | GCGC | 2 cut(s) | 431, 1671 |
| GsuI | CTGGAG | 1 cut(s) | 1967 |
| HaeII | RGCGCY | 1 cut(s) | 433 |
| HaeIII | GGCC | 6 cut(s) | 466, 820, 912, 1797, 2158, 2201 |
| HapII | CCGG | 8 cut(s) | 210, 390, 467, 888, 1336, 1721, 1857, 1880 |
| HgaI | GACGC | 2 cut(s) | 1685, 1772 |
| HhaI | GCGC | 2 cut(s) | 432, 1672 |
| Hin1I | GRCGYC | 5 cut(s) | 430, 1198, 1396, 1764, 1830 |
| Hin1II | CATG | 6 cut(s) | 1190, 1403, 1594, 1706, 1773, 2111 |
| Hin6I | GCGC | 2 cut(s) | 430, 1670 |
| HinP1I | GCGC | 2 cut(s) | 430, 1670 |
| HincII | GTYRAC | 1 cut(s) | 625 |
| HindII | GTYRAC | 1 cut(s) | 625 |
| HpaII | CCGG | 8 cut(s) | 210, 390, 467, 888, 1336, 1721, 1857, 1880 |
| HphI | GGTGA | 2 cut(s) | 1607, 1735 |
| Hpy166II | GTNNAC | 6 cut(s) | 625, 1251, 1492, 1582, 1924, 2183 |
| Hpy188I | TCNGA | 6 cut(s) | 129, 1112, 1390, 1789, 2114, 2151 |
| Hpy8I | GTNNAC | 6 cut(s) | 625, 1251, 1492, 1582, 1924, 2183 |
| Hpy99I | CGWCG | 1 cut(s) | 1467 |
| HpyAV | CCTTC | 7 cut(s) | 62, 82, 222, 227, 539, 1628, 1709 |
| HpyCH4IV | ACGT | 5 cut(s) | 667, 1124, 1198, 1396, 1830 |
| HpyCH4V | TGCA | 2 cut(s) | 346, 1251 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 379, 438, 520, 590, 778, 1362, 1676, 1951, 2201 |
| HpyF3I | CTNAG | 6 cut(s) | 369, 519, 679, 1065, 1419, 2005 |
| HpySE526I | ACGT | 5 cut(s) | 667, 1124, 1198, 1396, 1830 |
| Hsp92I | GRCGYC | 5 cut(s) | 430, 1198, 1396, 1764, 1830 |
| Hsp92II | CATG | 6 cut(s) | 1190, 1403, 1594, 1706, 1773, 2111 |
| HspAI | GCGC | 2 cut(s) | 430, 1670 |
| KasI | GGCGCC | 1 cut(s) | 429 |
| Ksp22I | TGATCA | 1 cut(s) | 534 |
| LguI | GCTCTTC | 1 cut(s) | 372 |
| LmnI | GCTCC | 3 cut(s) | 1080, 1140, 2221 |
| Lsp1109I | GCAGC | 6 cut(s) | 648, 1291, 1368, 1666, 1840, 2135 |
| LweI | GCATC | 3 cut(s) | 1103, 1166, 2127 |
| MabI | ACCWGGT | 1 cut(s) | 526 |
| MaeII | ACGT | 5 cut(s) | 667, 1124, 1198, 1396, 1830 |
| MaeIII | GTNAC | 3 cut(s) | 212, 1733, 1961 |
| MfeI | CAATTG | 1 cut(s) | 1296 |
| MflI | RGATCY | 2 cut(s) | 1601, 1689 |
| MhlI | GDGCHC | 4 cut(s) | 145, 375, 1057, 1253 |
| Mly113I | GGCGCC | 1 cut(s) | 430 |
| MlyI | GAGTC | 4 cut(s) | 124, 429, 1184, 1511 |
| MmeI | TCCRAC | 8 cut(s) | 293, 315, 1090, 1099, 1368, 1838, 2092, 2129 |
| MroXI | GAANNNNTTC | 2 cut(s) | 232, 1126 |
| MseI | TTAA | 6 cut(s) | 185, 206, 783, 882, 1161, 1518 |
| MspA1I | CMGCKG | 1 cut(s) | 2126 |
| MspCI | CTTAAG | 1 cut(s) | 782 |
| MspI | CCGG | 8 cut(s) | 210, 390, 467, 888, 1336, 1721, 1857, 1880 |
| MspR9I | CCNGG | 5 cut(s) | 391, 528, 936, 1275, 1880 |
| MunI | CAATTG | 1 cut(s) | 1296 |
| Mva1269I | GAATGC | 1 cut(s) | 959 |
| MvaI | CCWGG | 3 cut(s) | 528, 936, 1275 |
| MvnI | CGCG | 4 cut(s) | 280, 584, 1513, 1670 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 379, 438, 520, 590, 778, 1362, 1676, 1951, 2201 |
| NarI | GGCGCC | 1 cut(s) | 430 |
| NciI | CCSGG | 2 cut(s) | 391, 1880 |
| NheI | GCTAGC | 1 cut(s) | 1306 |
| NlaIII | CATG | 6 cut(s) | 1190, 1403, 1594, 1706, 1773, 2111 |
| NlaIV | GGNNCC | 4 cut(s) | 431, 1691, 1812, 2217 |
| NmeAIII | GCCGAG | 1 cut(s) | 588 |
| NmuCI | GTSAC | 2 cut(s) | 1733, 1961 |
| NruI | TCGCGA | 1 cut(s) | 584 |
| NspV | TTCGAA | 1 cut(s) | 220 |
| PaeR7I | CTCGAG | 1 cut(s) | 1235 |
| PagI | TCATGA | 1 cut(s) | 1702 |
| PceI | AGGCCT | 1 cut(s) | 912 |
| PciSI | GCTCTTC | 1 cut(s) | 372 |
| PctI | GAATGC | 1 cut(s) | 959 |
| PdmI | GAANNNNTTC | 2 cut(s) | 232, 1126 |
| PfeI | GAWTC | 6 cut(s) | 193, 287, 318, 354, 1478, 2068 |
| PinAI | ACCGGT | 1 cut(s) | 209 |
| PleI | GAGTC | 4 cut(s) | 124, 428, 1184, 1510 |
| PluTI | GGCGCC | 1 cut(s) | 433 |
| PmaCI | CACGTG | 1 cut(s) | 668 |
| PmlI | CACGTG | 1 cut(s) | 668 |
| PpsI | GAGTC | 4 cut(s) | 124, 428, 1184, 1510 |
| Ppu21I | YACGTR | 1 cut(s) | 668 |
| Psp124BI | GAGCTC | 1 cut(s) | 375 |
| Psp1406I | AACGTT | 1 cut(s) | 1124 |
| Psp6I | CCWGG | 3 cut(s) | 526, 934, 1273 |
| PspCI | CACGTG | 1 cut(s) | 668 |
| PspEI | GGTNACC | 1 cut(s) | 212 |
| PspGI | CCWGG | 3 cut(s) | 526, 934, 1273 |
| PspN4I | GGNNCC | 4 cut(s) | 431, 1691, 1812, 2217 |
| PspPI | GGNCC | 4 cut(s) | 365, 818, 938, 1811 |
| PstNI | CAGNNNCTG | 1 cut(s) | 661 |
| PsuI | RGATCY | 2 cut(s) | 1601, 1689 |
| RruI | TCGCGA | 1 cut(s) | 584 |
| RsaI | GTAC | 6 cut(s) | 452, 1583, 1589, 1861, 1886, 2022 |
| RsaNI | GTAC | 6 cut(s) | 451, 1582, 1588, 1860, 1885, 2021 |
| SacI | GAGCTC | 1 cut(s) | 375 |
| SapI | GCTCTTC | 1 cut(s) | 372 |
| SaqAI | TTAA | 6 cut(s) | 185, 206, 783, 882, 1161, 1518 |
| Sau96I | GGNCC | 4 cut(s) | 365, 818, 938, 1811 |
| ScaI | AGTACT | 1 cut(s) | 1886 |
| SchI | GAGTC | 4 cut(s) | 124, 429, 1184, 1511 |
| ScrFI | CCNGG | 5 cut(s) | 391, 528, 936, 1275, 1880 |
| SduI | GDGCHC | 4 cut(s) | 145, 375, 1057, 1253 |
| SexAI | ACCWGGT | 1 cut(s) | 526 |
| SfaNI | GCATC | 3 cut(s) | 1103, 1166, 2127 |
| SfoI | GGCGCC | 1 cut(s) | 431 |
| Sfr274I | CTCGAG | 1 cut(s) | 1235 |
| SfuI | TTCGAA | 1 cut(s) | 220 |
| SinI | GGWCC | 3 cut(s) | 365, 938, 1811 |
| SlaI | CTCGAG | 1 cut(s) | 1235 |
| SmlI | CTYRAG | 4 cut(s) | 424, 782, 921, 1235 |
| SmoI | CTYRAG | 4 cut(s) | 424, 782, 921, 1235 |
| SseBI | AGGCCT | 1 cut(s) | 912 |
| SspDI | GGCGCC | 1 cut(s) | 429 |
| SstI | GAGCTC | 1 cut(s) | 375 |
| StuI | AGGCCT | 1 cut(s) | 912 |
| StyD4I | CCNGG | 5 cut(s) | 389, 526, 934, 1273, 1878 |
| StyI | CCWWGG | 2 cut(s) | 489, 907 |
| TaiI | ACGT | 5 cut(s) | 670, 1127, 1201, 1399, 1833 |
| TatI | WGTACW | 2 cut(s) | 1587, 1884 |
| TauI | GCSGC | 5 cut(s) | 283, 593, 996, 1516, 2204 |
| TfiI | GAWTC | 6 cut(s) | 193, 287, 318, 354, 1478, 2068 |
| Tru1I | TTAA | 6 cut(s) | 185, 206, 783, 882, 1161, 1518 |
| Tru9I | TTAA | 6 cut(s) | 185, 206, 783, 882, 1161, 1518 |
| TscAI | CASTG | 2 cut(s) | 625, 1175 |
| TseFI | GTSAC | 2 cut(s) | 1733, 1961 |
| TseI | GCWGC | 6 cut(s) | 661, 1279, 1356, 1679, 1853, 2123 |
| Tsp45I | GTSAC | 2 cut(s) | 1733, 1961 |
| TspDTI | ATGAA | 4 cut(s) | 782, 1331, 1607, 1691 |
| TspGWI | ACGGA | 4 cut(s) | 425, 1334, 1832, 2240 |
| TspRI | CASTG | 2 cut(s) | 625, 1175 |
| Vha464I | CTTAAG | 1 cut(s) | 782 |
| VneI | GTGCAC | 1 cut(s) | 1249 |
| VpaK11BI | GGWCC | 3 cut(s) | 365, 938, 1811 |
| XapI | RAATTY | 3 cut(s) | 187, 394, 877 |
| XhoI | CTCGAG | 1 cut(s) | 1235 |
| XmnI | GAANNNNTTC | 2 cut(s) | 232, 1126 |
| ZraI | GACGTC | 3 cut(s) | 1199, 1397, 1831 |
| ZrmI | AGTACT | 1 cut(s) | 1886 |