Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0007282

Physical Location & Seq

Genomic Coordinates Forward (+)

45438058 .. 45440837

Gene Structure 2780 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G556500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2370 bp

ATGGCTGCCTTTTGGTACAATAGCATCTTTCTGATCCTTAGCTTTTCCTTGGTTTCATTCTTTCCATGTAGCATTTATTCACTCTCCACTCTATCAATCTCTGAGTCTTCAAATCAAACATTAGTCTGTGCGCTCATACATCCCAACAACCAGCCTTCCTTTCTCAATTGTACTAGTTTTCCTAGTGGAATTCGAATTCCTGTCGACAAGAATGCTTCTTCTTCCTTCAGTGGTATAGTTGCTGGAGATGGGTTTTTATGCTCGTTGATGTCCCTGTCTTCTGCCCCCAATACTTCAATTTTGATTTGCTGGAGGTTCTCTGCCAATGGTACTAACATGTCCCGCAAGCGTATCTACAGAGGTCCGGCTCTCAAGCAACTTGTTGCTGGAAATTCCCATGTATGCGGCCTGGTTAATGGGAGTACAAGCCGCGTCGAATGCTGGCAATGGCACAGATTCAATTCAAACACGTGGAATCGACACAGCTATGACTTCTCAAGCATCTCCGTGGGAGAGAATTTTGTATGCGGGGTATCAAAAATTGGGAAAGTTACTTGCTTAGGAAGCAATAATAAAGTGGTTGGAAACGAGCCTAGCTGGAATTGCAGTGCTGTAAGTGCAGGGTTCAATCATGCTTGTGGCATCTCATCGGAGAATGATAGTTTGCATTGTTGGGGAGATATGAAGGGTGATAAACCACAAGAGAAATTCACATCTCTGGCCTTGGGAGAGAACCGCAGTTGTGCTCTCAGGACTAATGGAACAGTTGTTTGCTGGGGTGAAAATAACTTCAGCTTGCCTGTGGATCTGCAAGAAACTTATTTCGTAGCAATTGAAGCAAAACGAAGTGTCTTCTGCGGAGTGCTGTCATCTAATTTTTCCTTGTATTGCTGGGGCAACCCAATTTTTGATGCCTCAAACAATTTCACGGTGTTCGAGAGTGACGTGAAGCCAGGGCCGTGTACAAGGGAGTGCCCATCATGGAGCAATGCATTACCAGGCTATGGTAGATTTTGTGAACAAGGATATGTAGTTTGCCAACCCCATGAAGGGACCGAAGAGCCGCCTGATCAACGACCATTTGCACCGTCACCGGCACCAGAGATCGACAAGCCCCCATCATCATCAGGGAGTAAATGGAGCAAGAAAATGGTGGCTTTTCTTGTAGTGGGGTGTGTCGGCTCCATAGCTTTCGTTTTGGTATGTTGTTTCTTGGCGTTCAAGTTTTGCAAAATTAGAGGAAGCCGCATTCATGACTCGGGCCCCTTGGAGATGACCCAGTTACAAGGTCATCAAGGCGCCGTTGCAGCTAATGCTGCCGCAGCTGTAGTGGCAGGGCAGCCGGTGTTGGAGAAGCGGCTGAGCCATGTGGTGAGCATGGGTGCCAATGGGGCTTCTTTGGAGGAATTTTCATTGGAAGAACTTCTAGAAGCCACTTCTAACTTCTCCGAAGAACACAAAATCGGAACAGGCAGCTATGGCTCAGTCTACTACGCCAGATTAACTGACGGCCGCCAAGTGGCCATCAAGCGCGCCGAGACCTCAGCCTCCTCCTCCTACGTCGGTGGACATGCAAGGCGCCAGGAGGACAAAGACAACGCTTTCGTCAACGAGCTCGAATCCCTCTCCCGCCTCAACCACAAGAACCTAGTCCGCTTGCTCGGCTTTTTCGAAGACACAAAAGAGCGCATTTTGGTGTACGAGTACATGAACAACGCTACTCTCCACGACCATCTCCACAAGCTCCCACACTCCCCTCTAGTCTCATGGGCCGCGCGCATCAACGTGGCTCTCGATGCAGCCCGAGGCGTTGAGTACCTCCACGTGTACGCAGTCCCACCAGTCATACACCGTGACATCAAGTCGTCCAACATATTACTGGACGACACATTGCACGCCAAGGTGTCGGACTTCGGGCTATCCTTGATGGGCCCGGAGGACGATGAGTCGCACCTCTCACTCCGGGCAGCCGGTACATTCGGGTACATGGACCCAGAGTACTACCGGCTGCAACAGCTGACGACGAAGAGTGACGTGTACAGCTTTGGAGTGGTGTTGCTAGAGCTGTTGTCGGGTTACAACGCAATTCACAAGAATGAAAACGGGGTGCCAAGAAACGTTGTGGATTTTGTGGTGCCGTACATTGTGAACGATGAGATCCATCGGATATTGGACCCGAAAATGCCCGCCCCGAACCCGTTTGAGATCGAGGCCGTGGCATACGTTGGGTACTTGGCGGCGGATTGTGTAAGTTTGGAAGGTAGGGACAGGCCATCCATGACTGACATAGTGAGTAGCTTGGAAAGAGCGTTGAGTTTTTGCTTGGCAAGCGTTTCTCGCTCTTCTTCCACGACTCAGTCTTCCACGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0005488 GO:0005515 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0042802 GO:0042803 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0046983 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr RCC1_2

Protein Analysis

790

Amino Acids

86.34

Weight (kDa)

6.1

Isoelectric Point (pI)

43.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007282)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G47850
fragaria_vesca	FvH4_5g31410
malus_domestica	MD15G1404800.v1.1
prunus_persica	Prupe.1G556500_v2.0.a1
pyrus_communis	pycom08g18820 pycom15g36220
rosa_chinensis	RchiOBHm_Chr7g0223691 RchiOBHm_Chr7g0226681
rosa_laevigata	RLG00000001707
rosa_multiflora	Rmu_sc0000816.1_g000029 Rmu_sc0001903.1_g000021
rosa_roxburghii	Rroxscaffold_3G00232510 Rroxscaffold_3G00237430
rosa_rugosa	Rorug07G0218800 Rorug07G0239200
rosa_samantha	Rh7AG361600 Rh7AG387200 Rh7BG353100 Rh7BG373400 Rh7CG380200 Rh7CG406400 Rh7DG357000 Rh7DG385500
rosa_wichuraiana	Rw7G030740 Rw7G032470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	6 cut(s)	1096, 1298, 1382, 1578, 2107, 2134
AccB7I	CCANNNNNTGG	1 cut(s)	1004
AccI	GTMKAC	2 cut(s)	204, 1488
AccII	CGCG	4 cut(s)	432, 1533, 1775, 1777
AclI	AACGTT	1 cut(s)	2118
AclWI	GGATC	3 cut(s)	28, 813, 2152
AcoI	YGGCCR	2 cut(s)	1510, 1521
AcsI	RAATTY	6 cut(s)	189, 195, 391, 517, 707, 1406
AcuI	CTGAAG	2 cut(s)	211, 775
AcvI	CACGTG	2 cut(s)	471, 1825
AcyI	GRCGYC	2 cut(s)	1299, 1579
AfiI	CCNNNNNNNGG	4 cut(s)	1004, 1049, 1050, 1519
AflIII	ACRYGT	4 cut(s)	336, 468, 1824, 2034
AgsI	TTSAA	7 cut(s)	111, 297, 460, 465, 628, 836, 1222
AhdI	GACNNNNNGTC	2 cut(s)	1861, 1945
AhlI	ACTAGT	1 cut(s)	173
AjiI	CACGTC	2 cut(s)	946, 2035
AjnI	CCWGG	4 cut(s)	408, 952, 997, 1581
Alw21I	GWGCWC	2 cut(s)	748, 1617
Alw26I	GTCTC	2 cut(s)	1532, 1768
AlwI	GGATC	3 cut(s)	28, 813, 2152
Ama87I	CYCGRG	2 cut(s)	1258, 1803
ApaI	GGGCCC	2 cut(s)	1265, 1934
ApeKI	GCWGC	9 cut(s)	5, 1307, 1316, 1322, 1339, 1473, 1799, 1967, 2008
ApoI	RAATTY	6 cut(s)	189, 195, 391, 517, 707, 1406
ArsI	GACNNNNNNTTYG	2 cut(s)	1586, 1618
Asp700I	GAANNNNTTC	1 cut(s)	1422
AspLEI	GCGC	8 cut(s)	133, 1301, 1533, 1535, 1581, 1689, 1777, 1779
AsuC2I	CCSGG	2 cut(s)	1934, 1964
AsuHPI	GGTGA	4 cut(s)	701, 791, 1083, 1384
AsuII	TTCGAA	2 cut(s)	193, 1671
AvaI	CYCGRG	2 cut(s)	1258, 1803
AvaII	GGWCC	4 cut(s)	362, 1053, 1990, 2173
BaeGI	GKGCMC	3 cut(s)	977, 1265, 1934
BalI	TGGCCA	1 cut(s)	1523
BanI	GGYRCC	6 cut(s)	1096, 1298, 1382, 1578, 2107, 2134
BanII	GRGCYC	3 cut(s)	1265, 1617, 1934
BbrPI	CACGTG	2 cut(s)	471, 1825
BbsI	GAAGAC	5 cut(s)	99, 270, 844, 1680, 2352
Bbv12I	GWGCWC	2 cut(s)	748, 1617
BbvCI	CCTCAGC	1 cut(s)	1543
BbvI	GCAGC	8 cut(s)	1303, 1319, 1334, 1351, 1485, 1811, 1979, 1995
BccI	CCATC	8 cut(s)	242, 985, 1126, 1532, 1740, 1921, 2169, 2281
BceAI	ACGGC	5 cut(s)	943, 1286, 1525, 2122, 2198
BcgI	CGANNNNNNTGC	2 cut(s)	194, 228
BciT130I	CCWGG	4 cut(s)	410, 954, 999, 1583
BclI	TGATCA	1 cut(s)	1069
BcnI	CCSGG	2 cut(s)	1934, 1964
BcoDI	GTCTC	2 cut(s)	1532, 1768
BcuI	ACTAGT	1 cut(s)	173
BfaI	CTAG	7 cut(s)	174, 183, 594, 1427, 1649, 1760, 2060
BfmI	CTRYAG	2 cut(s)	355, 1326
BfoI	RGCGCY	2 cut(s)	1302, 1582
BglI	GCCNNNNNGGC	1 cut(s)	1391
BlpI	GCTNAGC	1 cut(s)	1361
BmcAI	AGTACT	1 cut(s)	2000
Bme1390I	CCNGG	6 cut(s)	410, 954, 999, 1583, 1934, 1964
Bme18I	GGWCC	4 cut(s)	362, 1053, 1990, 2173
BmeRI	GACNNNNNGTC	2 cut(s)	1861, 1945
BmeT110I	CYCGRG	2 cut(s)	1258, 1803
BmgBI	CACGTC	2 cut(s)	946, 2035
BmrFI	CCNGG	6 cut(s)	410, 954, 999, 1583, 1934, 1964
BmrI	ACTGGG	1 cut(s)	1273
BmsI	GCATC	6 cut(s)	33, 510, 651, 901, 1786, 1788
BmuI	ACTGGG	1 cut(s)	1273
BpiI	GAAGAC	5 cut(s)	99, 270, 844, 1680, 2352
BpmI	CTGGAG	2 cut(s)	264, 331
Bpu10I	CCTNAGC	3 cut(s)	38, 559, 1543
Bpu1102I	GCTNAGC	1 cut(s)	1361
Bpu14I	TTCGAA	2 cut(s)	193, 1671
BpuEI	CTTGAG	2 cut(s)	356, 481
BpuMI	CCSGG	2 cut(s)	1934, 1964
BsaAI	YACGTR	3 cut(s)	471, 1825, 2367
BsaHI	GRCGYC	2 cut(s)	1299, 1579
BsaI	GGTCTC	1 cut(s)	1532
BsaJI	CCNNGG	8 cut(s)	48, 507, 723, 953, 1266, 1804, 1899, 2214
Bsc4I	CCNNNNNNNGG	4 cut(s)	1004, 1049, 1050, 1519
Bse118I	RCCGGY	4 cut(s)	1093, 1342, 1970, 2004
Bse1I	ACTGG	3 cut(s)	1279, 1841, 1884
Bse3DI	GCAATG	3 cut(s)	452, 994, 1889
BseBI	CCWGG	4 cut(s)	410, 954, 999, 1583
BseDI	CCNNGG	8 cut(s)	48, 507, 723, 953, 1266, 1804, 1899, 2214
BseGI	GGATG	2 cut(s)	139, 2273
BseLI	CCNNNNNNNGG	4 cut(s)	1004, 1049, 1050, 1519
BseMI	GCAATG	3 cut(s)	452, 994, 1889
BseMII	CTCAG	6 cut(s)	93, 763, 1352, 1497, 1557, 2369
BseNI	ACTGG	3 cut(s)	1279, 1841, 1884
BsePI	GCGCGC	2 cut(s)	1531, 1775
BseRI	GAGGAG	2 cut(s)	1540, 1543
BseSI	GKGCMC	3 cut(s)	977, 1265, 1934
BseX3I	CGGCCG	1 cut(s)	1510
BseXI	GCAGC	8 cut(s)	1303, 1319, 1334, 1351, 1485, 1811, 1979, 1995
BseYI	CCCAGC	2 cut(s)	774, 891
BsgI	GTGCAG	1 cut(s)	639
Bsh1236I	CGCG	4 cut(s)	432, 1533, 1775, 1777
Bsh1285I	CGRYCG	1 cut(s)	1513
BshNI	GGYRCC	6 cut(s)	1096, 1298, 1382, 1578, 2107, 2134
BsiEI	CGRYCG	1 cut(s)	1513
BsiHKAI	GWGCWC	2 cut(s)	748, 1617
BsiHKCI	CYCGRG	2 cut(s)	1258, 1803
BsiSI	CCGG	7 cut(s)	365, 1094, 1343, 1934, 1963, 1971, 2005
BslFI	GGGAC	5 cut(s)	256, 325, 1066, 1820, 2279
BslI	CCNNNNNNNGG	4 cut(s)	1004, 1049, 1050, 1519
BsmAI	GTCTC	2 cut(s)	1532, 1768
BsmFI	GGGAC	5 cut(s)	256, 325, 1066, 1820, 2279
BsmI	GAATGC	3 cut(s)	217, 443, 1248
Bso31I	GGTCTC	1 cut(s)	1532
BsoBI	CYCGRG	2 cut(s)	1258, 1803
Bsp119I	TTCGAA	2 cut(s)	193, 1671
Bsp120I	GGGCCC	2 cut(s)	1261, 1930
Bsp1286I	GDGCHC	5 cut(s)	748, 977, 1265, 1617, 1934
Bsp1407I	TGTACA	2 cut(s)	962, 2037
Bsp143I	GATC	6 cut(s)	33, 805, 1069, 1104, 2157, 2205
Bsp1720I	GCTNAGC	1 cut(s)	1361
BspCNI	CTCAG	6 cut(s)	94, 762, 1353, 1496, 1556, 2368
BspFNI	CGCG	4 cut(s)	432, 1533, 1775, 1777
BspHI	TCATGA	1 cut(s)	1252
BspPI	GGATC	3 cut(s)	28, 813, 2152
BspQI	GCTCTTC	2 cut(s)	1053, 2347
BspT104I	TTCGAA	2 cut(s)	193, 1671
BspT107I	GGYRCC	6 cut(s)	1096, 1298, 1382, 1578, 2107, 2134
BspTNI	GGTCTC	1 cut(s)	1532
BsrDI	GCAATG	3 cut(s)	452, 994, 1889
BsrFI	RCCGGY	4 cut(s)	1093, 1342, 1970, 2004
BsrGI	TGTACA	2 cut(s)	962, 2037
BsrI	ACTGG	3 cut(s)	1279, 1841, 1884
BssAI	RCCGGY	4 cut(s)	1093, 1342, 1970, 2004
BssECI	CCNNGG	8 cut(s)	48, 507, 723, 953, 1266, 1804, 1899, 2214
BssHII	GCGCGC	2 cut(s)	1531, 1775
BssMI	GATC	6 cut(s)	33, 805, 1069, 1104, 2157, 2205
BssNI	GRCGYC	2 cut(s)	1299, 1579
BssT1I	CCWWGG	4 cut(s)	48, 723, 1266, 1899
Bst2UI	CCWGG	4 cut(s)	410, 954, 999, 1583
Bst4CI	ACNGT	4 cut(s)	766, 931, 1089, 1853
Bst6I	CTCTTC	3 cut(s)	1053, 2021, 2347
BstACI	GRCGYC	2 cut(s)	1299, 1579
BstAPI	GCANNNNNTGC	1 cut(s)	1313
BstAUI	TGTACA	2 cut(s)	962, 2037
BstBAI	YACGTR	3 cut(s)	471, 1825, 2367
BstBI	TTCGAA	2 cut(s)	193, 1671
BstC8I	GCNNGC	9 cut(s)	347, 443, 797, 1533, 1658, 1777, 1896, 2187, 2329
BstDEI	CTNAG	8 cut(s)	38, 102, 559, 749, 1361, 1483, 1543, 2355
BstDSI	CCRYGG	2 cut(s)	507, 2214
BstF5I	GGATG	2 cut(s)	139, 2273
BstFNI	CGCG	4 cut(s)	432, 1533, 1775, 1777
BstH2I	RGCGCY	2 cut(s)	1302, 1582
BstHHI	GCGC	8 cut(s)	133, 1301, 1533, 1535, 1581, 1689, 1777, 1779
BstKTI	GATC	6 cut(s)	36, 808, 1072, 1107, 2160, 2208
BstMAI	GTCTC	2 cut(s)	1532, 1768
BstMBI	GATC	6 cut(s)	33, 805, 1069, 1104, 2157, 2205
BstMCI	CGRYCG	1 cut(s)	1513
BstNI	CCWGG	4 cut(s)	410, 954, 999, 1583
BstNSI	RCATGY	2 cut(s)	340, 1574
BstSCI	CCNGG	6 cut(s)	408, 952, 997, 1581, 1932, 1962
BstSFI	CTRYAG	2 cut(s)	355, 1326
BstSLI	GKGCMC	3 cut(s)	977, 1265, 1934
BstUI	CGCG	4 cut(s)	432, 1533, 1775, 1777
BstV1I	GCAGC	8 cut(s)	1303, 1319, 1334, 1351, 1485, 1811, 1979, 1995
BstV2I	GAAGAC	5 cut(s)	99, 270, 844, 1680, 2352
BstX2I	RGATCY	2 cut(s)	805, 2157
BstYI	RGATCY	2 cut(s)	805, 2157
BstZI	CGGCCG	1 cut(s)	1510
BtgI	CCRYGG	2 cut(s)	507, 2214
BtrI	CACGTC	2 cut(s)	946, 2035
BtsCI	GGATG	2 cut(s)	139, 2273
BtsI	GCAGTG	1 cut(s)	613
BtsIMutI	CAGTG	2 cut(s)	235, 613
Cac8I	GCNNGC	9 cut(s)	347, 443, 797, 1533, 1658, 1777, 1896, 2187, 2329
CciI	TCATGA	1 cut(s)	1252
CfoI	GCGC	8 cut(s)	133, 1301, 1533, 1535, 1581, 1689, 1777, 1779
Cfr10I	RCCGGY	4 cut(s)	1093, 1342, 1970, 2004
CseI	GACGC	1 cut(s)	421
DdeI	CTNAG	8 cut(s)	38, 102, 559, 749, 1361, 1483, 1543, 2355
DinI	GGCGCC	2 cut(s)	1300, 1580
DpnI	GATC	6 cut(s)	35, 807, 1071, 1106, 2159, 2207
DpnII	GATC	6 cut(s)	33, 805, 1069, 1104, 2157, 2205
DriI	GACNNNNNGTC	2 cut(s)	1861, 1945
EaeI	YGGCCR	2 cut(s)	1510, 1521
EagI	CGGCCG	1 cut(s)	1510
Eam1104I	CTCTTC	3 cut(s)	1053, 2021, 2347
Eam1105I	GACNNNNNGTC	2 cut(s)	1861, 1945
EarI	CTCTTC	3 cut(s)	1053, 2021, 2347
EciI	GGCGGA	1 cut(s)	2255
Ecl136II	GAGCTC	1 cut(s)	1615
EclXI	CGGCCG	1 cut(s)	1510
Eco130I	CCWWGG	4 cut(s)	48, 723, 1266, 1899
Eco24I	GRGCYC	3 cut(s)	1265, 1617, 1934
Eco31I	GGTCTC	1 cut(s)	1532
Eco47I	GGWCC	4 cut(s)	362, 1053, 1990, 2173
Eco52I	CGGCCG	1 cut(s)	1510
Eco53kI	GAGCTC	1 cut(s)	1615
Eco57I	CTGAAG	2 cut(s)	211, 775
Eco72I	CACGTG	2 cut(s)	471, 1825
Eco88I	CYCGRG	2 cut(s)	1258, 1803
EcoICRI	GAGCTC	1 cut(s)	1615
EcoO109I	RGGNCCY	1 cut(s)	1262
EcoRI	GAATTC	2 cut(s)	189, 195
EcoRII	CCWGG	4 cut(s)	408, 952, 997, 1581
EcoT14I	CCWWGG	4 cut(s)	48, 723, 1266, 1899
EcoT22I	ATGCAT	1 cut(s)	994
EcoT38I	GRGCYC	3 cut(s)	1265, 1617, 1934
EgeI	GGCGCC	2 cut(s)	1300, 1580
EheI	GGCGCC	2 cut(s)	1300, 1580
ErhI	CCWWGG	4 cut(s)	48, 723, 1266, 1899
FaqI	GGGAC	5 cut(s)	256, 325, 1066, 1820, 2279
FauI	CCCGC	4 cut(s)	350, 521, 1637, 2194
FbaI	TGATCA	1 cut(s)	1069
FblI	GTMKAC	2 cut(s)	204, 1488
FokI	GGATG	2 cut(s)	126, 2260
FriOI	GRGCYC	3 cut(s)	1265, 1617, 1934
FspBI	CTAG	7 cut(s)	174, 183, 594, 1427, 1649, 1760, 2060
GlaI	GCGC	8 cut(s)	132, 1300, 1532, 1534, 1580, 1688, 1776, 1778
GsaI	CCCAGC	2 cut(s)	778, 895
GsuI	CTGGAG	2 cut(s)	264, 331
HaeII	RGCGCY	2 cut(s)	1302, 1582
HapII	CCGG	7 cut(s)	365, 1094, 1343, 1934, 1963, 1971, 2005
HgaI	GACGC	1 cut(s)	421
HhaI	GCGC	8 cut(s)	133, 1301, 1533, 1535, 1581, 1689, 1777, 1779
Hin1I	GRCGYC	2 cut(s)	1299, 1579
Hin6I	GCGC	8 cut(s)	131, 1299, 1531, 1533, 1579, 1687, 1775, 1777
HinP1I	GCGC	8 cut(s)	131, 1299, 1531, 1533, 1579, 1687, 1775, 1777
HincII	GTYRAC	2 cut(s)	205, 1609
HindII	GTYRAC	2 cut(s)	205, 1609
HinfI	GANTC	7 cut(s)	104, 456, 475, 1256, 1619, 1946, 2353
HpaII	CCGG	7 cut(s)	365, 1094, 1343, 1934, 1963, 1971, 2005
HphI	GGTGA	4 cut(s)	701, 791, 1083, 1384
Hpy188I	TCNGA	7 cut(s)	33, 103, 652, 1450, 1466, 1909, 2166
Hpy188III	TCNNGA	5 cut(s)	751, 937, 1253, 1427, 1793
Hpy99I	CGWCG	3 cut(s)	437, 1565, 2026
HpyAV	CCTTC	5 cut(s)	165, 235, 679, 1043, 2252
HpyCH4III	ACNGT	4 cut(s)	766, 931, 1089, 1853
HpyCH4IV	ACGT	9 cut(s)	470, 945, 1560, 1785, 1824, 2034, 2118, 2223, 2366
HpyF3I	CTNAG	8 cut(s)	38, 102, 559, 749, 1361, 1483, 1543, 2355
HpySE526I	ACGT	9 cut(s)	470, 945, 1560, 1785, 1824, 2034, 2118, 2223, 2366
Hsp92I	GRCGYC	2 cut(s)	1299, 1579
HspAI	GCGC	8 cut(s)	131, 1299, 1531, 1533, 1579, 1687, 1775, 1777
KasI	GGCGCC	2 cut(s)	1298, 1578
Ksp22I	TGATCA	1 cut(s)	1069
Kzo9I	GATC	6 cut(s)	33, 805, 1069, 1104, 2157, 2205
LguI	GCTCTTC	2 cut(s)	1053, 2347
LmnI	GCTCC	4 cut(s)	984, 1140, 1187, 1749
Lsp1109I	GCAGC	8 cut(s)	1303, 1319, 1334, 1351, 1485, 1811, 1979, 1995
LweI	GCATC	6 cut(s)	33, 510, 651, 901, 1786, 1788
MaeI	CTAG	7 cut(s)	174, 183, 594, 1427, 1649, 1760, 2060
MaeII	ACGT	9 cut(s)	470, 945, 1560, 1785, 1824, 2034, 2118, 2223, 2366
MaeIII	GTNAC	7 cut(s)	550, 941, 1089, 1281, 1853, 2030, 2075
MalI	GATC	6 cut(s)	35, 807, 1071, 1106, 2159, 2207
MboI	GATC	6 cut(s)	33, 805, 1069, 1104, 2157, 2205
MfeI	CAATTG	2 cut(s)	166, 831
MflI	RGATCY	2 cut(s)	805, 2157
MhlI	GDGCHC	5 cut(s)	748, 977, 1265, 1617, 1934
MlsI	TGGCCA	1 cut(s)	1523
MluNI	TGGCCA	1 cut(s)	1523
Mly113I	GGCGCC	2 cut(s)	1299, 1579
MlyI	GAGTC	4 cut(s)	113, 1250, 1955, 2347
MmeI	TCCRAC	4 cut(s)	562, 1329, 1887, 1893
Mox20I	TGGCCA	1 cut(s)	1523
Mph1103I	ATGCAT	1 cut(s)	994
MroXI	GAANNNNTTC	1 cut(s)	1422
MscI	TGGCCA	1 cut(s)	1523
MseI	TTAA	2 cut(s)	414, 1502
MslI	CAYNNNNRTG	6 cut(s)	486, 506, 636, 1694, 1784, 2094
Msp20I	TGGCCA	1 cut(s)	1523
MspA1I	CMGCKG	2 cut(s)	1325, 2017
MspI	CCGG	7 cut(s)	365, 1094, 1343, 1934, 1963, 1971, 2005
MspR9I	CCNGG	6 cut(s)	410, 954, 999, 1583, 1934, 1964
MunI	CAATTG	2 cut(s)	166, 831
Mva1269I	GAATGC	3 cut(s)	217, 443, 1248
MvaI	CCWGG	4 cut(s)	410, 954, 999, 1583
MvnI	CGCG	4 cut(s)	432, 1533, 1775, 1777
NarI	GGCGCC	2 cut(s)	1299, 1579
NciI	CCSGG	2 cut(s)	1934, 1964
NdeII	GATC	6 cut(s)	33, 805, 1069, 1104, 2157, 2205
NmeAIII	GCCGAG	2 cut(s)	1561, 1641
NmuCI	GTSAC	4 cut(s)	941, 1089, 1853, 2030
NsiI	ATGCAT	1 cut(s)	994
NspI	RCATGY	2 cut(s)	340, 1574
NspV	TTCGAA	2 cut(s)	193, 1671
PagI	TCATGA	1 cut(s)	1252
PauI	GCGCGC	2 cut(s)	1531, 1775
PciI	ACATGT	1 cut(s)	336
PciSI	GCTCTTC	2 cut(s)	1053, 2347
PcsI	WCGNNNNNNNCGW	3 cut(s)	942, 1668, 1791
PctI	GAATGC	3 cut(s)	217, 443, 1248
PdmI	GAANNNNTTC	1 cut(s)	1422
PfeI	GAWTC	3 cut(s)	456, 475, 1619
PflFI	GACNNNGTC	1 cut(s)	2356
PflMI	CCANNNNNTGG	1 cut(s)	1004
PleI	GAGTC	4 cut(s)	112, 1250, 1954, 2347
PluTI	GGCGCC	2 cut(s)	1302, 1582
PmaCI	CACGTG	2 cut(s)	471, 1825
PmlI	CACGTG	2 cut(s)	471, 1825
PpsI	GAGTC	4 cut(s)	112, 1250, 1954, 2347
Ppu21I	YACGTR	3 cut(s)	471, 1825, 2367
PscI	ACATGT	1 cut(s)	336
Psp124BI	GAGCTC	1 cut(s)	1617
Psp1406I	AACGTT	1 cut(s)	2118
Psp6I	CCWGG	4 cut(s)	408, 952, 997, 1581
PspCI	CACGTG	2 cut(s)	471, 1825
PspFI	CCCAGC	2 cut(s)	774, 891
PspGI	CCWGG	4 cut(s)	408, 952, 997, 1581
PspOMI	GGGCCC	2 cut(s)	1261, 1930
PsuI	RGATCY	2 cut(s)	805, 2157
PsyI	GACNNNGTC	1 cut(s)	2356
PteI	GCGCGC	2 cut(s)	1531, 1775
PvuII	CAGCTG	2 cut(s)	1325, 2017
RseI	CAYNNNNRTG	6 cut(s)	486, 506, 636, 1694, 1784, 2094
SacI	GAGCTC	1 cut(s)	1617
SalI	GTCGAC	1 cut(s)	203
SapI	GCTCTTC	2 cut(s)	1053, 2347
SaqAI	TTAA	2 cut(s)	414, 1502
Sau3AI	GATC	6 cut(s)	33, 805, 1069, 1104, 2157, 2205
ScaI	AGTACT	1 cut(s)	2000
SchI	GAGTC	4 cut(s)	113, 1250, 1955, 2347
ScrFI	CCNGG	6 cut(s)	410, 954, 999, 1583, 1934, 1964
SduI	GDGCHC	5 cut(s)	748, 977, 1265, 1617, 1934
SfaNI	GCATC	6 cut(s)	33, 510, 651, 901, 1786, 1788
SfcI	CTRYAG	2 cut(s)	355, 1326
SfoI	GGCGCC	2 cut(s)	1300, 1580
SfuI	TTCGAA	2 cut(s)	193, 1671
SinI	GGWCC	4 cut(s)	362, 1053, 1990, 2173
SmiMI	CAYNNNNRTG	6 cut(s)	486, 506, 636, 1694, 1784, 2094
SmlI	CTYRAG	2 cut(s)	371, 496
SmoI	CTYRAG	2 cut(s)	371, 496
SpeI	ACTAGT	1 cut(s)	173
SspDI	GGCGCC	2 cut(s)	1298, 1578
SspMI	CTAG	7 cut(s)	174, 183, 594, 1427, 1649, 1760, 2060
SstI	GAGCTC	1 cut(s)	1617
StyD4I	CCNGG	6 cut(s)	408, 952, 997, 1581, 1932, 1962
StyI	CCWWGG	4 cut(s)	48, 723, 1266, 1899
TaaI	ACNGT	4 cut(s)	766, 931, 1089, 1853
TaiI	ACGT	9 cut(s)	473, 948, 1563, 1788, 1827, 2037, 2121, 2226, 2369
TaqII	GACCGA	1 cut(s)	1070
TatI	WGTACW	6 cut(s)	170, 422, 962, 1704, 1998, 2037
TauI	GCSGC	9 cut(s)	408, 432, 1066, 1248, 1322, 1360, 1515, 1775, 2240
TfiI	GAWTC	3 cut(s)	456, 475, 1619
Tru1I	TTAA	2 cut(s)	414, 1502
Tru9I	TTAA	2 cut(s)	414, 1502
TscAI	CASTG	2 cut(s)	235, 613
TseFI	GTSAC	4 cut(s)	941, 1089, 1853, 2030
TseI	GCWGC	9 cut(s)	5, 1307, 1316, 1322, 1339, 1473, 1799, 1967, 2008
Tsp45I	GTSAC	4 cut(s)	941, 1089, 1853, 2030
TspDTI	ATGAA	7 cut(s)	45, 698, 1062, 1241, 1401, 1724, 2112
TspGWI	ACGGA	1 cut(s)	496
TspRI	CASTG	2 cut(s)	235, 613
Tth111I	GACNNNGTC	1 cut(s)	2356
Van91I	CCANNNNNTGG	1 cut(s)	1004
VpaK11BI	GGWCC	4 cut(s)	362, 1053, 1990, 2173
XapI	RAATTY	6 cut(s)	189, 195, 391, 517, 707, 1406
XbaI	TCTAGA	1 cut(s)	1426
XceI	RCATGY	2 cut(s)	340, 1574
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1876
XmiI	GTMKAC	2 cut(s)	204, 1488
XmnI	GAANNNNTTC	1 cut(s)	1422
XspI	CTAG	7 cut(s)	174, 183, 594, 1427, 1649, 1760, 2060
ZrmI	AGTACT	1 cut(s)	2000
Zsp2I	ATGCAT	1 cut(s)	994

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.