Rorug07G0239200

Serine threonine-protein kinase-like protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
22015800 .. 22016102
303 bp
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UTR
Exon/CDS
Intron
Rorug07G0239200.1

Sequence Viewer

Length: 303 bp
ATGAAACCTAGTGCCGCTAGTTATAGTTCTGGTCGGCAGCATAGTGGGAAAGCATGTTTAATTGCTCTATGGCTTTGTATGAGCTTTATCTTTCCGGTATGTCACTCTTGTGAAGCAAATGGTGTTGCCCAGATATCTAGTTTGTCAACCATTGCTACTCGGTGCATGTTTGAGTACATAAGATTAGTGGAGATTCCTGTTATTATCCAGGATGCTCTCTCCGTACTTATTGTAATTTGGGGTTCAGGTTTTACGTCCCCCCCCCCCCCATTGTATTCAACAGTTTCATTAATGAAGGATTGA

Protein Analysis

100

Amino Acids

10.84

Weight (kDa)

7.64

Isoelectric Point (pI)

59.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 15
AfaI GTAC 2 cut(s) 176, 225
AgsI TTSAA 1 cut(s) 279
AjnI CCWGG 1 cut(s) 207
AleI CACNNNNGTG 1 cut(s) 108
AluBI AGCT 1 cut(s) 84
AluI AGCT 1 cut(s) 84
ApeKI GCWGC 1 cut(s) 37
AseI ATTAAT 1 cut(s) 290
BbvI GCAGC 1 cut(s) 49
BciT130I CCWGG 1 cut(s) 209
BfaI CTAG 3 cut(s) 9, 18, 138
BisI GCNGC 2 cut(s) 15, 38
BlsI GCNGC 2 cut(s) 16, 39
Bme1390I CCNGG 1 cut(s) 209
BmrFI CCNGG 1 cut(s) 209
BmsI GCATC 1 cut(s) 202
BsaWI WCCGGW 1 cut(s) 94
Bse3DI GCAATG 1 cut(s) 150
BseBI CCWGG 1 cut(s) 209
BseGI GGATG 1 cut(s) 217
BseMI GCAATG 1 cut(s) 150
BseXI GCAGC 1 cut(s) 49
BsiSI CCGG 1 cut(s) 95
BslFI GGGAC 1 cut(s) 241
BsmFI GGGAC 1 cut(s) 241
BspACI CCGC 1 cut(s) 15
BsrDI GCAATG 1 cut(s) 150
Bst2UI CCWGG 1 cut(s) 209
Bst4CI ACNGT 1 cut(s) 283
BstF5I GGATG 1 cut(s) 217
BstNI CCWGG 1 cut(s) 209
BstNSI RCATGY 2 cut(s) 57, 169
BstSCI CCNGG 1 cut(s) 207
BstV1I GCAGC 1 cut(s) 49
BtsCI GGATG 1 cut(s) 217
Csp6I GTAC 2 cut(s) 175, 224
CviAII CATG 2 cut(s) 54, 166
CviJI RGCY 2 cut(s) 73, 84
CviKI_1 RGCY 2 cut(s) 73, 84
CviQI GTAC 2 cut(s) 175, 224
Eco32I GATATC 1 cut(s) 135
EcoRII CCWGG 1 cut(s) 207
EcoRV GATATC 1 cut(s) 135
FaeI CATG 2 cut(s) 57, 169
FaiI YATR 8 cut(s) 24, 42, 55, 70, 80, 100, 167, 179
FaqI GGGAC 1 cut(s) 241
FatI CATG 2 cut(s) 53, 165
Fnu4HI GCNGC 2 cut(s) 15, 38
FokI GGATG 1 cut(s) 224
Fsp4HI GCNGC 2 cut(s) 15, 38
FspBI CTAG 3 cut(s) 9, 18, 138
GluI GCNGC 2 cut(s) 15, 38
HapII CCGG 1 cut(s) 95
Hin1II CATG 2 cut(s) 57, 169
HincII GTYRAC 1 cut(s) 147
HindII GTYRAC 1 cut(s) 147
HinfI GANTC 1 cut(s) 193
HpaII CCGG 1 cut(s) 95
Hpy166II GTNNAC 1 cut(s) 147
Hpy8I GTNNAC 1 cut(s) 147
HpyAV CCTTC 1 cut(s) 289
HpyCH4III ACNGT 1 cut(s) 283
HpyCH4IV ACGT 1 cut(s) 254
HpyCH4V TGCA 1 cut(s) 165
HpySE526I ACGT 1 cut(s) 254
Hsp92II CATG 2 cut(s) 57, 169
LpnPI CCDG 7 cut(s) 15, 108, 143, 194, 210, 221, 231
Lsp1109I GCAGC 1 cut(s) 49
LweI GCATC 1 cut(s) 202
MaeI CTAG 3 cut(s) 9, 18, 138
MaeII ACGT 1 cut(s) 254
MaeIII GTNAC 1 cut(s) 101
MluCI AATT 2 cut(s) 60, 234
MseI TTAA 2 cut(s) 59, 290
MslI CAYNNNNRTG 1 cut(s) 108
MspI CCGG 1 cut(s) 95
MspR9I CCNGG 1 cut(s) 209
MvaI CCWGG 1 cut(s) 209
NlaIII CATG 2 cut(s) 57, 169
NmuCI GTSAC 1 cut(s) 101
NspI RCATGY 2 cut(s) 57, 169
OliI CACNNNNGTG 1 cut(s) 108
PfeI GAWTC 1 cut(s) 193
PfoI TCCNGGA 1 cut(s) 207
PkrI GCNGC 2 cut(s) 16, 39
PshBI ATTAAT 1 cut(s) 290
Psp6I CCWGG 1 cut(s) 207
PspGI CCWGG 1 cut(s) 207
RsaI GTAC 2 cut(s) 176, 225
RsaNI GTAC 2 cut(s) 175, 224
RseI CAYNNNNRTG 1 cut(s) 108
SaqAI TTAA 2 cut(s) 59, 290
SatI GCNGC 2 cut(s) 15, 38
ScrFI CCNGG 1 cut(s) 209
SetI ASST 4 cut(s) 10, 86, 250, 257
SfaNI GCATC 1 cut(s) 202
SmiMI CAYNNNNRTG 1 cut(s) 108
Sse9I AATT 2 cut(s) 60, 234
SsiI CCGC 1 cut(s) 15
SspMI CTAG 3 cut(s) 9, 18, 138
StyD4I CCNGG 1 cut(s) 207
TaaI ACNGT 1 cut(s) 283
TaiI ACGT 1 cut(s) 257
TasI AATT 2 cut(s) 60, 234
TatI WGTACW 1 cut(s) 174
TauI GCSGC 1 cut(s) 17
TfiI GAWTC 1 cut(s) 193
Tru1I TTAA 2 cut(s) 59, 290
Tru9I TTAA 2 cut(s) 59, 290
TseFI GTSAC 1 cut(s) 101
TseI GCWGC 1 cut(s) 37
Tsp45I GTSAC 1 cut(s) 101
TspDTI ATGAA 2 cut(s) 17, 276
TspGWI ACGGA 1 cut(s) 211
VspI ATTAAT 1 cut(s) 290
XceI RCATGY 2 cut(s) 57, 169
XspI CTAG 3 cut(s) 9, 18, 138
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.