Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0007282

Physical Location & Seq

Genomic Coordinates Forward (+)

18144337 .. 18146640

Gene Structure 2304 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00232510.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2304 bp

ATGGCTTCCTTGATCTTCAGCTTCATCTTGTTCTTGTCTTCTTGCCTCATCCCTATTCATTCACTCTCCACAGTATCAATCTCTGAAACTTCCAATAATCAAACACTAATTTGTTCTCTGACCCAGCAACAATCTTTCCTCAACTGTACTAGTTTTCCTAGTGGAATTAGAATTCCTGTGAGCACAGACACTTCATTTACTGGTTTGGTTGGTGGGTATGGCTTTTTATGTGCTTTGCGGTCGGGGTCCTCATCTTCTTCATCAGTCATGACTTGCTGGAGGTTCTCTGCCAATGGGACTAACATGTCCGCTAAGCGAATTTATACCGGTCCGGCTCTCAAGGAACTCAAAGCAGGAAACTCCAGCGTTTGCGGCCTAGTTGATGGGACTAATCGCCTCCAATGCTGGCAGTGGCATGGGTTCAATTCAGATACAAATCACAGCAACTTCTCGAGGAGCATCGCAGTGGGAGACAAATTTGTCTGCGGAGTTTCAGAAATCGGAGAGGTAACTTGCACTGGAAGTAATACCAAAGTGATTGATACAAAGCATATAAGGGGTAATTACAGTCATGTAAGTGCAGGGTCTAATTATGCTTGTGCAATCTCAAGGAGTAATGGTAGTTTGGATTGTTGGGGAGAAATGAAGGGTCACAAACCACAAGGGAAGTTTACTTCCCTGGCCTTGGGCGACAACCGAAGCTGTGGCCTGAGGCCTAATGGAACAGTTGTTTGTTGGGGGGAAGATGGCTTCAGTTTGCCTCAAAGTTTAAGAGAGACTTACTTCACCTCAATCGAAGCAAAAAGCAGCGTTTTCTGCGGGGTCTTGTCGACGAATTTTTCCTTGTATTGCTGGGGAAACCAAGTGTTTGATACCCAAGACAATTTCTTGGTTTTCAGTGCTGTGAAGCCAGGGCCATGTAGAAGAGAGTGCCCATTGTATAGCTCTAAATTACCAGGCTATGGCAGCTTTTGTGAACAAGGATATGTAGTTTGTCAACCTTGTGAGGGGACAACTGTAGTATTTCAACCAGCGCCGGGGCCAATACCGCAACCACCGAGGGAGTCTAAGTGGAGCAAGAAAATGGTTGCTTTTCTTGTAGTGGGTTGTGTTGGGTCCTCCGCTTTCTTGTTGGTTTGTGGCTACTTTGTGTTCAAGAATTGCAAAATTAGAGGTTCCAGAATCCATGACTCGGGTCGATTAGATGATATCGAGAGCCAAACTAATCAGCCTGGTTCAGGGCAACTCCAAATCCAACGAGCTCAACAACCACCGGTACCGGTGTTGGAGAAGCGGCTAAGCCACTTGTTTAGCCTGGGAGCCAATGGAGGTTCATTGGAGGAATTTTCGTTGCCAGTGCTACTAGAGGCCACCAACAACTTCTCAGAAGAACACAAGATTGGGACAGGCGGCTATGGCTCAGTCTACTATGCCACATTAGATGATGGCACCCGTGAAGTGGCCATCAAGCGTGCCGAATCACCAGCGTCCTCATCATCTGTTGGCGGGCACACTAGGCGCCAAGAGGACAACGACAGTGCATTTGTGAATGAGCTTGAGTCTCTATCACGCCTACACCACAAGAATCTAGTTCGATTGTTGGGGTTTTACGAAGACGCAAAAGAGAGAATATTGGTGTATGAGTACATGAACAATGGTTCCCTTCATGACCATCTCCACAAGATCACAGTTTCCCCTCTAATGTCATGGTCCGCACGCATTCAGGTGGCACTTGACGCGGCCAGAGGCATCGAATACCTCCACATCTACGCAGTCCCACCAATCATACACCGCGACATCAAGTCATCCAACATATTGTTGGACGACAAGTGGAGAGCCAAGGTGGCCGATTTTGGCCTATCTTTGATGGGTCCCGGGGAAGACGAGTGCTACTTGCCGCTGCGTGCTGCTGGCACATTTGGTTACATGGACCCTGAGTACTATAGGCTGCAACAATTGACCACGAAAAGTGACGTGTACAGTTTCGGGGTAGTGTTGCTCGAGTTGCTGTCGGGGTATAGCGCCATTCATAAAAATGAGAACGGGGTGCCAAGAAATGTGGTGGATTTTGTAGTACCGTATATTGTAAATGATCAAATTCACAGGATTTTGGACCCGAAGATGCCGCCACCGACGCCATTTGAAATAGAGGCCGTGGCGTATGTGGGTTACTTAGCAGCGGACTGTGTGAGCCTAGAGGGCAGAGATAGGCCTACCATGACTGAGATTGCAAGCAACTTGGAAAGAGCTTTAGCTTATTGTTTGGCATCGCCACCAAGTTCAAGAACCGAGTCTTTGACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0005488 GO:0005515 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0042802 GO:0042803 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0046983 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr RCC1_2

Protein Analysis

767

Amino Acids

83.94

Weight (kDa)

6.56

Isoelectric Point (pI)

47.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	461 - 744	3.2e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	464 - 747	1.7e-41	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007282)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G47850
fragaria_vesca	FvH4_5g31410
malus_domestica	MD15G1404800.v1.1
prunus_persica	Prupe.1G556500_v2.0.a1
pyrus_communis	pycom08g18820 pycom15g36220
rosa_chinensis	RchiOBHm_Chr7g0223691 RchiOBHm_Chr7g0226681
rosa_laevigata	RLG00000001707
rosa_multiflora	Rmu_sc0000816.1_g000029 Rmu_sc0001903.1_g000021
rosa_roxburghii	Rroxscaffold_3G00232510 Rroxscaffold_3G00237430
rosa_rugosa	Rorug07G0218800 Rorug07G0239200
rosa_samantha	Rh7AG361600 Rh7AG387200 Rh7BG353100 Rh7BG373400 Rh7CG380200 Rh7CG406400 Rh7DG357000 Rh7DG385500
rosa_wichuraiana	Rw7G030740 Rw7G032470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	304, 479
Acc65I	GGTACC	1 cut(s)	1276
AccB1I	GGYRCC	4 cut(s)	1276, 1448, 1518, 2047
AccB7I	CCANNNNNTGG	1 cut(s)	962
AccI	GTMKAC	2 cut(s)	830, 1425
AccII	CGCG	2 cut(s)	1739, 1794
AcoI	YGGCCR	3 cut(s)	1461, 1740, 1845
AcsI	RAATTY	6 cut(s)	171, 318, 476, 835, 1343, 2097
AcuI	CTGAAG	1 cut(s)	736
AcyI	GRCGYC	2 cut(s)	1519, 2135
AfaI	GTAC	6 cut(s)	148, 1278, 1646, 1940, 1979, 2076
AfiI	CCNNNNNNNGG	7 cut(s)	685, 962, 1007, 1037, 1192, 1238, 1459
AflIII	ACRYGT	2 cut(s)	303, 1974
AgeI	ACCGGT	3 cut(s)	326, 1273, 1279
AgsI	TTSAA	5 cut(s)	424, 1028, 1156, 2144, 2283
AhdI	GACNNNNNGTC	1 cut(s)	1801
AhlI	ACTAGT	1 cut(s)	149
AjiI	CACGTC	1 cut(s)	1975
AjnI	CCWGG	5 cut(s)	678, 910, 955, 1231, 1314
AjuI	GAANNNNNNNTTGG	2 cut(s)	1383, 1415
AloI	GAACNNNNNNTCC	2 cut(s)	1643, 1675
AluBI	AGCT	8 cut(s)	21, 702, 945, 969, 1262, 1555, 2249, 2255
AluI	AGCT	8 cut(s)	21, 702, 945, 969, 1262, 1555, 2249, 2255
Alw21I	GWGCWC	2 cut(s)	185, 1264
Alw26I	GTCTC	3 cut(s)	465, 770, 1566
Ama87I	CYCGRG	4 cut(s)	451, 1192, 1874, 2000
ApeKI	GCWGC	6 cut(s)	807, 966, 1900, 1907, 1948, 2177
ApoI	RAATTY	6 cut(s)	171, 318, 476, 835, 1343, 2097
ArsI	GACNNNNNNTTYG	2 cut(s)	1526, 1558
AsiGI	ACCGGT	3 cut(s)	326, 1273, 1279
Asp718I	GGTACC	1 cut(s)	1276
AspLEI	GCGC	3 cut(s)	1036, 1521, 2024
AspS9I	GGNCC	9 cut(s)	246, 329, 914, 1040, 1116, 1710, 1871, 1930, 2113
AsuC2I	CCSGG	3 cut(s)	1038, 1875, 1876
AsuHPI	GGTGA	2 cut(s)	778, 1473
AvaI	CYCGRG	4 cut(s)	451, 1192, 1874, 2000
AvaII	GGWCC	7 cut(s)	246, 329, 1116, 1710, 1871, 1930, 2113
AxyI	CCTNAGG	1 cut(s)	710
BaeGI	GKGCMC	2 cut(s)	935, 1512
BaeI	ACNNNNGTAYC	2 cut(s)	1268, 1301
BalI	TGGCCA	1 cut(s)	1463
BanI	GGYRCC	4 cut(s)	1276, 1448, 1518, 2047
BanII	GRGCYC	1 cut(s)	1264
BbsI	GAAGAC	3 cut(s)	30, 1620, 1887
Bbv12I	GWGCWC	2 cut(s)	185, 1264
BbvI	GCAGC	6 cut(s)	819, 978, 1887, 1894, 1935, 2189
BccI	CCATC	6 cut(s)	377, 740, 1439, 1472, 1680, 1861
BceAI	ACGGC	1 cut(s)	2138
BciT130I	CCWGG	5 cut(s)	680, 912, 957, 1233, 1316
BclI	TGATCA	1 cut(s)	2092
BcnI	CCSGG	3 cut(s)	1038, 1875, 1876
BcoDI	GTCTC	3 cut(s)	465, 770, 1566
BcuI	ACTAGT	1 cut(s)	149
BfaI	CTAG	7 cut(s)	150, 159, 377, 1364, 1515, 1589, 2195
BfmI	CTRYAG	2 cut(s)	1017, 1942
BfoI	RGCGCY	3 cut(s)	1037, 1522, 2025
BglI	GCCNNNNNGGC	2 cut(s)	1844, 2199
BlpI	GCTNAGC	2 cut(s)	312, 1298
BmcAI	AGTACT	1 cut(s)	1940
Bme1390I	CCNGG	8 cut(s)	680, 912, 957, 1038, 1233, 1316, 1875, 1876
Bme18I	GGWCC	7 cut(s)	246, 329, 1116, 1710, 1871, 1930, 2113
BmeRI	GACNNNNNGTC	1 cut(s)	1801
BmeT110I	CYCGRG	4 cut(s)	451, 1192, 1874, 2000
BmgBI	CACGTC	1 cut(s)	1975
BmgT120I	GGNCC	9 cut(s)	246, 329, 914, 1040, 1116, 1710, 1871, 1930, 2113
BmrFI	CCNGG	8 cut(s)	680, 912, 957, 1038, 1233, 1316, 1875, 1876
BmsI	GCATC	4 cut(s)	468, 1758, 2112, 2276
BoxI	GACNNNNGTC	1 cut(s)	1194
BpiI	GAAGAC	3 cut(s)	30, 1620, 1887
BpmI	CTGGAG	2 cut(s)	298, 346
Bpu1102I	GCTNAGC	2 cut(s)	312, 1298
BpuEI	CTTGAG	3 cut(s)	323, 592, 1577
BpuMI	CCSGG	3 cut(s)	1038, 1875, 1876
BsaBI	GATNNNNATC	1 cut(s)	435
BsaHI	GRCGYC	2 cut(s)	1519, 2135
BsaWI	WCCGGW	3 cut(s)	326, 1273, 1279
BsaXI	ACNNNNNCTCC	4 cut(s)	604, 634, 1055, 1085
Bsc4I	CCNNNNNNNGG	7 cut(s)	685, 962, 1007, 1037, 1192, 1238, 1459
Bse118I	RCCGGY	3 cut(s)	326, 1273, 1279
Bse1I	ACTGG	3 cut(s)	205, 523, 1355
Bse21I	CCTNAGG	1 cut(s)	710
Bse8I	GATNNNNATC	1 cut(s)	435
BseBI	CCWGG	5 cut(s)	680, 912, 957, 1233, 1316
BseGI	GGATG	2 cut(s)	48, 1805
BseJI	GATNNNNATC	1 cut(s)	435
BseLI	CCNNNNNNNGG	7 cut(s)	685, 962, 1007, 1037, 1192, 1238, 1459
BseMII	CTCAG	5 cut(s)	701, 1398, 1434, 1926, 2214
BseNI	ACTGG	3 cut(s)	205, 523, 1355
BseRI	GAGGAG	1 cut(s)	469
BseSI	GKGCMC	2 cut(s)	935, 1512
BseXI	GCAGC	6 cut(s)	819, 978, 1887, 1894, 1935, 2189
BseYI	CCCAGC	2 cut(s)	123, 852
BsgI	GTGCAG	1 cut(s)	600
Bsh1236I	CGCG	2 cut(s)	1739, 1794
Bsh1285I	CGRYCG	1 cut(s)	242
BshNI	GGYRCC	4 cut(s)	1276, 1448, 1518, 2047
BshTI	ACCGGT	3 cut(s)	326, 1273, 1279
BsiEI	CGRYCG	1 cut(s)	242
BsiHKAI	GWGCWC	2 cut(s)	185, 1264
BsiHKCI	CYCGRG	4 cut(s)	451, 1192, 1874, 2000
BsiSI	CCGG	6 cut(s)	327, 332, 1037, 1274, 1280, 1875
BslFI	GGGAC	6 cut(s)	310, 400, 1024, 1417, 1760, 1857
BslI	CCNNNNNNNGG	7 cut(s)	685, 962, 1007, 1037, 1192, 1238, 1459
BsmAI	GTCTC	3 cut(s)	465, 770, 1566
BsmFI	GGGAC	6 cut(s)	310, 400, 1024, 1417, 1760, 1857
BsmI	GAATGC	1 cut(s)	1719
BsoBI	CYCGRG	4 cut(s)	451, 1192, 1874, 2000
Bsp1286I	GDGCHC	4 cut(s)	185, 935, 1264, 1512
Bsp1407I	TGTACA	1 cut(s)	1977
Bsp143I	GATC	3 cut(s)	12, 1683, 2092
Bsp1720I	GCTNAGC	2 cut(s)	312, 1298
BspCNI	CTCAG	5 cut(s)	702, 1397, 1433, 1927, 2215
BspFNI	CGCG	2 cut(s)	1739, 1794
BspHI	TCATGA	2 cut(s)	267, 1666
BspT107I	GGYRCC	4 cut(s)	1276, 1448, 1518, 2047
BsrFI	RCCGGY	3 cut(s)	326, 1273, 1279
BsrGI	TGTACA	1 cut(s)	1977
BsrI	ACTGG	3 cut(s)	205, 523, 1355
BssAI	RCCGGY	3 cut(s)	326, 1273, 1279
BssMI	GATC	3 cut(s)	12, 1683, 2092
BssNI	GRCGYC	2 cut(s)	1519, 2135
BssT1I	CCWWGG	2 cut(s)	684, 1839
Bst2UI	CCWGG	5 cut(s)	680, 912, 957, 1233, 1316
Bst6I	CTCTTC	1 cut(s)	919
BstACI	GRCGYC	2 cut(s)	1519, 2135
BstAUI	TGTACA	1 cut(s)	1977
BstC8I	GCNNGC	7 cut(s)	407, 1473, 1508, 1717, 1905, 1912, 2233
BstDSI	CCRYGG	1 cut(s)	2154
BstENI	CCTNNNNNAGG	1 cut(s)	1236
BstF5I	GGATG	2 cut(s)	48, 1805
BstFNI	CGCG	2 cut(s)	1739, 1794
BstH2I	RGCGCY	3 cut(s)	1037, 1522, 2025
BstHHI	GCGC	3 cut(s)	1036, 1521, 2024
BstKTI	GATC	3 cut(s)	15, 1686, 2095
BstMAI	GTCTC	3 cut(s)	465, 770, 1566
BstMBI	GATC	3 cut(s)	12, 1683, 2092
BstMCI	CGRYCG	1 cut(s)	242
BstNI	CCWGG	5 cut(s)	680, 912, 957, 1233, 1316
BstNSI	RCATGY	1 cut(s)	307
BstPAI	GACNNNNGTC	1 cut(s)	1194
BstSCI	CCNGG	8 cut(s)	678, 910, 955, 1036, 1231, 1314, 1873, 1874
BstSFI	CTRYAG	2 cut(s)	1017, 1942
BstSLI	GKGCMC	2 cut(s)	935, 1512
BstUI	CGCG	2 cut(s)	1739, 1794
BstV1I	GCAGC	6 cut(s)	819, 978, 1887, 1894, 1935, 2189
BstV2I	GAAGAC	3 cut(s)	30, 1620, 1887
Bsu36I	CCTNAGG	1 cut(s)	710
BtgI	CCRYGG	1 cut(s)	2154
BtgZI	GCGATG	2 cut(s)	445, 2253
BtrI	CACGTC	1 cut(s)	1975
BtsCI	GGATG	2 cut(s)	48, 1805
BtsI	GCAGTG	2 cut(s)	416, 471
BtsIMutI	CAGTG	6 cut(s)	416, 471, 516, 904, 1362, 1543
Cac8I	GCNNGC	7 cut(s)	407, 1473, 1508, 1717, 1905, 1912, 2233
CciI	TCATGA	2 cut(s)	267, 1666
CfoI	GCGC	3 cut(s)	1036, 1521, 2024
Cfr10I	RCCGGY	3 cut(s)	326, 1273, 1279
Cfr13I	GGNCC	9 cut(s)	246, 329, 914, 1040, 1116, 1710, 1871, 1930, 2113
Cfr9I	CCCGGG	1 cut(s)	1874
CpoI	CGGWCCG	1 cut(s)	329
CseI	GACGC	4 cut(s)	1476, 1625, 1745, 2143
Csp6I	GTAC	6 cut(s)	147, 1277, 1645, 1939, 1978, 2075
CspAI	ACCGGT	3 cut(s)	326, 1273, 1279
CspCI	CAANNNNNGTGG	2 cut(s)	2040, 2075
CspI	CGGWCCG	1 cut(s)	329
CviQI	GTAC	6 cut(s)	147, 1277, 1645, 1939, 1978, 2075
DinI	GGCGCC	1 cut(s)	1520
DpnI	GATC	3 cut(s)	14, 1685, 2094
DpnII	GATC	3 cut(s)	12, 1683, 2092
DrdI	GACNNNNNNGTC	2 cut(s)	304, 479
DriI	GACNNNNNGTC	1 cut(s)	1801
DseDI	GACNNNNNNGTC	2 cut(s)	304, 479
EaeI	YGGCCR	3 cut(s)	1461, 1740, 1845
Eam1104I	CTCTTC	1 cut(s)	919
Eam1105I	GACNNNNNGTC	1 cut(s)	1801
EarI	CTCTTC	1 cut(s)	919
Ecl136II	GAGCTC	1 cut(s)	1262
Eco130I	CCWWGG	2 cut(s)	684, 1839
Eco147I	AGGCCT	2 cut(s)	715, 2212
Eco24I	GRGCYC	1 cut(s)	1264
Eco32I	GATATC	1 cut(s)	1210
Eco47I	GGWCC	7 cut(s)	246, 329, 1116, 1710, 1871, 1930, 2113
Eco53kI	GAGCTC	1 cut(s)	1262
Eco57I	CTGAAG	1 cut(s)	736
Eco81I	CCTNAGG	1 cut(s)	710
Eco88I	CYCGRG	4 cut(s)	451, 1192, 1874, 2000
EcoICRI	GAGCTC	1 cut(s)	1262
EcoNI	CCTNNNNNAGG	1 cut(s)	1236
EcoO109I	RGGNCCY	3 cut(s)	246, 1116, 1871
EcoRI	GAATTC	1 cut(s)	171
EcoRII	CCWGG	5 cut(s)	678, 910, 955, 1231, 1314
EcoRV	GATATC	1 cut(s)	1210
EcoT14I	CCWWGG	2 cut(s)	684, 1839
EcoT38I	GRGCYC	1 cut(s)	1264
EgeI	GGCGCC	1 cut(s)	1520
EheI	GGCGCC	1 cut(s)	1520
ErhI	CCWWGG	2 cut(s)	684, 1839
FalI	AAGNNNNNCTT	2 cut(s)	763, 795
FaqI	GGGAC	6 cut(s)	310, 400, 1024, 1417, 1760, 1857
FauI	CCCGC	2 cut(s)	812, 1499
FbaI	TGATCA	1 cut(s)	2092
FblI	GTMKAC	2 cut(s)	830, 1425
FokI	GGATG	2 cut(s)	35, 1792
FriOI	GRGCYC	1 cut(s)	1264
FspBI	CTAG	7 cut(s)	150, 159, 377, 1364, 1515, 1589, 2195
GlaI	GCGC	3 cut(s)	1035, 1520, 2023
GsaI	CCCAGC	2 cut(s)	127, 856
GsuI	CTGGAG	2 cut(s)	298, 346
HaeII	RGCGCY	3 cut(s)	1037, 1522, 2025
HapII	CCGG	6 cut(s)	327, 332, 1037, 1274, 1280, 1875
HgaI	GACGC	4 cut(s)	1476, 1625, 1745, 2143
HhaI	GCGC	3 cut(s)	1036, 1521, 2024
Hin1I	GRCGYC	2 cut(s)	1519, 2135
Hin6I	GCGC	3 cut(s)	1034, 1519, 2022
HinP1I	GCGC	3 cut(s)	1034, 1519, 2022
HincII	GTYRAC	2 cut(s)	831, 998
HindII	GTYRAC	2 cut(s)	831, 998
HinfI	GANTC	7 cut(s)	1064, 1182, 1190, 1478, 1559, 1585, 2291
HpaII	CCGG	6 cut(s)	327, 332, 1037, 1274, 1280, 1875
HphI	GGTGA	2 cut(s)	778, 1473
Hpy166II	GTNNAC	6 cut(s)	672, 831, 977, 998, 1426, 1978
Hpy188I	TCNGA	6 cut(s)	85, 120, 430, 496, 503, 1387
Hpy188III	TCNNGA	7 cut(s)	268, 451, 1156, 1179, 1213, 1667, 2283
Hpy8I	GTNNAC	6 cut(s)	672, 831, 977, 998, 1426, 1978
Hpy99I	CGWCG	2 cut(s)	835, 2137
HpyAV	CCTTC	2 cut(s)	640, 1673
HpyCH4IV	ACGT	1 cut(s)	1974
HpyCH4V	TGCA	7 cut(s)	516, 581, 602, 1164, 1541, 1951, 2231
HpySE526I	ACGT	1 cut(s)	1974
Hsp92I	GRCGYC	2 cut(s)	1519, 2135
HspAI	GCGC	3 cut(s)	1034, 1519, 2022
KasI	GGCGCC	1 cut(s)	1518
KflI	GGGWCCC	1 cut(s)	1871
KpnI	GGTACC	1 cut(s)	1280
Ksp22I	TGATCA	1 cut(s)	2092
Kzo9I	GATC	3 cut(s)	12, 1683, 2092
LmnI	GCTCC	3 cut(s)	456, 1074, 1319
Lsp1109I	GCAGC	6 cut(s)	819, 978, 1887, 1894, 1935, 2189
LweI	GCATC	4 cut(s)	468, 1758, 2112, 2276
MaeI	CTAG	7 cut(s)	150, 159, 377, 1364, 1515, 1589, 2195
MaeII	ACGT	1 cut(s)	1974
MaeIII	GTNAC	5 cut(s)	508, 650, 1922, 1970, 2168
MalI	GATC	3 cut(s)	14, 1685, 2094
MboI	GATC	3 cut(s)	12, 1683, 2092
MfeI	CAATTG	1 cut(s)	1955
MhlI	GDGCHC	4 cut(s)	185, 935, 1264, 1512
MlsI	TGGCCA	1 cut(s)	1463
MluNI	TGGCCA	1 cut(s)	1463
Mly113I	GGCGCC	1 cut(s)	1519
MlyI	GAGTC	4 cut(s)	1073, 1184, 1568, 2300
MmeI	TCCRAC	4 cut(s)	1266, 1279, 1800, 1833
Mox20I	TGGCCA	1 cut(s)	1463
MscI	TGGCCA	1 cut(s)	1463
MseI	TTAA	1 cut(s)	770
MslI	CAYNNNNRTG	4 cut(s)	464, 576, 1724, 2034
Msp20I	TGGCCA	1 cut(s)	1463
MspA1I	CMGCKG	2 cut(s)	1900, 2180
MspI	CCGG	6 cut(s)	327, 332, 1037, 1274, 1280, 1875
MspR9I	CCNGG	8 cut(s)	680, 912, 957, 1038, 1233, 1316, 1875, 1876
MunI	CAATTG	1 cut(s)	1955
Mva1269I	GAATGC	1 cut(s)	1719
MvaI	CCWGG	5 cut(s)	680, 912, 957, 1233, 1316
MvnI	CGCG	2 cut(s)	1739, 1794
NarI	GGCGCC	1 cut(s)	1519
NciI	CCSGG	3 cut(s)	1038, 1875, 1876
NdeII	GATC	3 cut(s)	12, 1683, 2092
NmuCI	GTSAC	2 cut(s)	650, 1970
NspI	RCATGY	1 cut(s)	307
PaeR7I	CTCGAG	2 cut(s)	451, 2000
PagI	TCATGA	2 cut(s)	267, 1666
PceI	AGGCCT	2 cut(s)	715, 2212
PciI	ACATGT	1 cut(s)	303
PctI	GAATGC	1 cut(s)	1719
PfeI	GAWTC	3 cut(s)	1182, 1478, 1585
PflMI	CCANNNNNTGG	1 cut(s)	962
PinAI	ACCGGT	3 cut(s)	326, 1273, 1279
PleI	GAGTC	4 cut(s)	1072, 1184, 1567, 2299
PluTI	GGCGCC	1 cut(s)	1522
PpsI	GAGTC	4 cut(s)	1072, 1184, 1567, 2299
PpuMI	RGGWCCY	3 cut(s)	246, 1116, 1871
PscI	ACATGT	1 cut(s)	303
PshAI	GACNNNNGTC	1 cut(s)	1194
Psp124BI	GAGCTC	1 cut(s)	1264
Psp5II	RGGWCCY	3 cut(s)	246, 1116, 1871
Psp6I	CCWGG	5 cut(s)	678, 910, 955, 1231, 1314
PspFI	CCCAGC	2 cut(s)	123, 852
PspGI	CCWGG	5 cut(s)	678, 910, 955, 1231, 1314
PspPI	GGNCC	9 cut(s)	246, 329, 914, 1040, 1116, 1710, 1871, 1930, 2113
PspPPI	RGGWCCY	3 cut(s)	246, 1116, 1871
PspXI	VCTCGAGB	1 cut(s)	2000
RsaI	GTAC	6 cut(s)	148, 1278, 1646, 1940, 1979, 2076
RsaNI	GTAC	6 cut(s)	147, 1277, 1645, 1939, 1978, 2075
RseI	CAYNNNNRTG	4 cut(s)	464, 576, 1724, 2034
Rsr2I	CGGWCCG	1 cut(s)	329
RsrII	CGGWCCG	1 cut(s)	329
SacI	GAGCTC	1 cut(s)	1264
SalI	GTCGAC	1 cut(s)	829
SaqAI	TTAA	1 cut(s)	770
Sau3AI	GATC	3 cut(s)	12, 1683, 2092
Sau96I	GGNCC	9 cut(s)	246, 329, 914, 1040, 1116, 1710, 1871, 1930, 2113
ScaI	AGTACT	1 cut(s)	1940
SchI	GAGTC	4 cut(s)	1073, 1184, 1568, 2300
ScrFI	CCNGG	8 cut(s)	680, 912, 957, 1038, 1233, 1316, 1875, 1876
SduI	GDGCHC	4 cut(s)	185, 935, 1264, 1512
SfaNI	GCATC	4 cut(s)	468, 1758, 2112, 2276
SfcI	CTRYAG	2 cut(s)	1017, 1942
SfoI	GGCGCC	1 cut(s)	1520
Sfr274I	CTCGAG	2 cut(s)	451, 2000
SinI	GGWCC	7 cut(s)	246, 329, 1116, 1710, 1871, 1930, 2113
SlaI	CTCGAG	2 cut(s)	451, 2000
SmaI	CCCGGG	1 cut(s)	1876
SmiMI	CAYNNNNRTG	4 cut(s)	464, 576, 1724, 2034
SmlI	CTYRAG	5 cut(s)	338, 451, 607, 1556, 2000
SmoI	CTYRAG	5 cut(s)	338, 451, 607, 1556, 2000
SpeI	ACTAGT	1 cut(s)	149
SseBI	AGGCCT	2 cut(s)	715, 2212
SspDI	GGCGCC	1 cut(s)	1518
SspI	AATATT	1 cut(s)	1632
SspMI	CTAG	7 cut(s)	150, 159, 377, 1364, 1515, 1589, 2195
SstI	GAGCTC	1 cut(s)	1264
StuI	AGGCCT	2 cut(s)	715, 2212
StyD4I	CCNGG	8 cut(s)	678, 910, 955, 1036, 1231, 1314, 1873, 1874
StyI	CCWWGG	2 cut(s)	684, 1839
TaiI	ACGT	1 cut(s)	1977
TaqI	TCGA	8 cut(s)	452, 795, 830, 1198, 1212, 1594, 1752, 2001
TatI	WGTACW	4 cut(s)	146, 1644, 1938, 1977
TauI	GCSGC	6 cut(s)	375, 1297, 1413, 1742, 1900, 2128
TfiI	GAWTC	3 cut(s)	1182, 1478, 1585
Tru1I	TTAA	1 cut(s)	770
Tru9I	TTAA	1 cut(s)	770
TscAI	CASTG	6 cut(s)	416, 471, 523, 904, 1362, 1543
TseFI	GTSAC	2 cut(s)	650, 1970
TseI	GCWGC	6 cut(s)	807, 966, 1900, 1907, 1948, 2177
Tsp45I	GTSAC	2 cut(s)	650, 1970
TspDTI	ATGAA	9 cut(s)	13, 47, 183, 249, 659, 1323, 1655, 1664, 2018
TspMI	CCCGGG	1 cut(s)	1874
TspRI	CASTG	6 cut(s)	416, 471, 523, 904, 1362, 1543
Van91I	CCANNNNNTGG	1 cut(s)	962
VpaK11BI	GGWCC	7 cut(s)	246, 329, 1116, 1710, 1871, 1930, 2113
XagI	CCTNNNNNAGG	1 cut(s)	1236
XapI	RAATTY	6 cut(s)	171, 318, 476, 835, 1343, 2097
XceI	RCATGY	1 cut(s)	307
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1816
XhoI	CTCGAG	2 cut(s)	451, 2000
XmaI	CCCGGG	1 cut(s)	1874
XmiI	GTMKAC	2 cut(s)	830, 1425
XspI	CTAG	7 cut(s)	150, 159, 377, 1364, 1515, 1589, 2195
ZrmI	AGTACT	1 cut(s)	1940

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.