Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0007282

Physical Location & Seq

Genomic Coordinates Forward (+)

47972396 .. 47975049

Gene Structure 2654 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG380200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2298 bp

ATGGCTTCCTTGATCTTCAGCTTCATCTTGTTCTTGTCTTCTTGCCTCATCCCTATTCATTCACTCTCGACAGTATCAATCTCTGAAACTTCCAATAATCAAACACTAATTTGTTCTCTGACCCAACAACAATCTTTCCTCAACTGTACTAGTTTTCCTAGTGGAATTAGAATTCCTGTGAGCACAGACACTTCATTTACTGGTTTGGTTGGTGGGTATGGCTTTTTATGTGCTTTGCGGTCGGGGTCCTCATCTTCTTCATCAGTCATGATTTGCTGGAGGTTCTCTGCCAATGGGACTAACATGTCCACTAAGCGAATTTATACCGGTCCGGCCCTCAAGGAACTCAGAGCAGGAAATTCCAGCGTTTGCGGCCTAGTTGATGGGACTAATCGCCTCCAATGCTGGCAGTGGCATGGGTTCAATTCAAATACAAGTCGCAGCGACTTCTCGAGGAGCATCGCAGTGGGAGACAAATTTGTCTGCGGAGTTTCAGAAATCGGAGAGGTAACTTGCACTGGAAGTAATACCAAAGTGATTGATACAAAGCATATAAGGGGTAATTACAGTCATGTAAGTGCAGGGTCTAATTATGCTTGTGCAATCTCATGGAGTAATGGTAGTTTGGATTGTTGGGGAGAAATGAAGGGTGACAAACCACAAGGGAAGTTTACTTCCCTGGCCTTGGGCGACAACCGAAGCTGTGGCCTGAGGCCTAATGGAACAGTTGTTTGTTGGGGGGAAGATGGCTTCAGTTTGCCTCAAAGTTTAAGAGAGACTTCCTTCACCTCAATCGAAGCAAAAAGCAGCGTTTTCTGCGGGGTCTTGTCGAAGAATTTTTCCTTGTATTGCTGGGGAAACCAAGTGTTTGATACCCAAGACAATTTCTTGGTCTTCAGTGCTGTGAAGCCAGGGCCATGTAGAAGAGACTGCCCATTGCATAGCTCTCTATTACCAGGCTATGGCAACTTTTGTGAACAAGGATATGTAGTTTGTCAACCTTGTGAGGGGACAACTATAGTAGTTCAATCAGTGCCGGGGCCAACACCGCAACCACCGAGGGAGTCTAAGTGGAGCAAGAAAATGGTTGCTTTTCTTGTAGTGGGTTGTGTTGGGTCCTCAGCTTTCTTGTTGGTTTGTGGCTACTTTGTGTTCAAGAATTGCAAAATTAGAGGTTCCAGAATCCATGACTCGGGTCGATTGGATGATATCGAGAGCCAAGCTAATCAGCCTGGTTCAGGGCAACTCCAAAGCCAACCAGCTCAACAACCACCAGTGTTGGAGAAGCGGCTAAGCCACTTGATTAGCCTGGGAGCCAATGGAGGTTCATTGGAGGAATTTTCGTTGCCAGTGCTACTAGAGGCCACCAACAACTTCTCAGAAGAACACAAGATTGGGACAGGCAGCTATGGCTCAGTCTACTATGCCACATTAGATGATGGCAACCGTGAAGTGGCCATCAAGCGTGCCGAATCATCAGCGTCCTCATCATCTGTTGGCGGGCACACTGGGCGCCAAGAGGACAATGACAGTGCATTTGTGAATGAGCTTGAGTCTCTATCACGCCTACACCACAAGAATCTAGTTCGATTGTTGGGGTTTTACGAAGACGCAAAAGAGAGAATATTGGTGTATGAGTACATGAACAATGGTTCCCTTCATGACCATCTCCACAAGATCACAGTTTCCCCTCTAATGTCATGGTCCGCACGCATTCAAGTGGCACTTGACGCGGCCAGAGGTATCGAATACCTCCACATGTACGCAGTCCCACCAATCATACACCGCGACATCAAGTCATCCAACATATTGTTGGACGACAAGTGGAGAGCCAAGGTGTCTGATTTTGGCTTATCTTTGATGGGTCCCGGGGAAGACGAGTCCTTTTTGCCGCTGCGTGCGGCTGGCACATTTGGTTACATGGACCCTGAGTATTATAGGCTGCAACAACTGACCACGAAAAGTGACGTGTACAGTTTCGGGGTAGTGTTGCTCGAGTTGCTGTCGGGGTATAGCGCGATTCATAAAAATGAGAACGGGGTGCCAAGAAACGTGGTGGATTTCGTAATACCGTATATTGTAAATGATGAAATTCACAGGATTTTGGACCCGAAGGTGCCGCCACCGACGCCATTTGAAATAGAGGCCGTGGCGTATGTGGGTTACTTAGCAGCAGACTGTGTGAGCCTAGAGGGCAGAGATAGGCCTTCCATGACTGAGATTGCAAGCAACTTGGAAAGAGCTTTAGCTTATTGTTTGGCATCGCCACCAAGTTCAAGAACCGAGTCTTTGACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0005488 GO:0005515 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0042802 GO:0042803 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0046983 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr RCC1_2

Protein Analysis

765

Amino Acids

83.47

Weight (kDa)

6.16

Isoelectric Point (pI)

45.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	459 - 742	3.6e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	462 - 745	6.9e-42	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007282)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G47850
fragaria_vesca	FvH4_5g31410
malus_domestica	MD15G1404800.v1.1
prunus_persica	Prupe.1G556500_v2.0.a1
pyrus_communis	pycom08g18820 pycom15g36220
rosa_chinensis	RchiOBHm_Chr7g0223691 RchiOBHm_Chr7g0226681
rosa_laevigata	RLG00000001707
rosa_multiflora	Rmu_sc0000816.1_g000029 Rmu_sc0001903.1_g000021
rosa_roxburghii	Rroxscaffold_3G00232510 Rroxscaffold_3G00237430
rosa_rugosa	Rorug07G0218800 Rorug07G0239200
rosa_samantha	Rh7AG361600 Rh7AG387200 Rh7BG353100 Rh7BG373400 Rh7CG380200 Rh7CG406400 Rh7DG357000 Rh7DG385500
rosa_wichuraiana	Rw7G030740 Rw7G032470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	304, 479
AccB1I	GGYRCC	3 cut(s)	1512, 2041, 2116
AccB7I	CCANNNNNTGG	1 cut(s)	962
AccI	GTMKAC	1 cut(s)	1419
AccII	CGCG	3 cut(s)	1733, 1788, 2018
AcoI	YGGCCR	2 cut(s)	1455, 1734
AcsI	RAATTY	7 cut(s)	171, 318, 358, 476, 835, 1337, 2091
AcuI	CTGAAG	2 cut(s)	736, 880
AcyI	GRCGYC	2 cut(s)	1513, 2129
AfaI	GTAC	4 cut(s)	148, 1640, 1763, 1973
AfiI	CCNNNNNNNGG	6 cut(s)	685, 962, 1007, 1192, 1238, 1453
AflIII	ACRYGT	3 cut(s)	303, 1758, 1968
AgeI	ACCGGT	1 cut(s)	326
AgsI	TTSAA	7 cut(s)	424, 429, 1028, 1156, 1718, 2138, 2277
AhdI	GACNNNNNGTC	1 cut(s)	1795
AhlI	ACTAGT	1 cut(s)	149
AjiI	CACGTC	1 cut(s)	1969
AjnI	CCWGG	5 cut(s)	678, 910, 955, 1231, 1308
AjuI	GAANNNNNNNTTGG	2 cut(s)	1377, 1409
AloI	GAACNNNNNNTCC	2 cut(s)	1637, 1669
Alw21I	GWGCWC	1 cut(s)	185
Alw26I	GTCTC	4 cut(s)	465, 770, 921, 1560
Ama87I	CYCGRG	4 cut(s)	451, 1192, 1868, 1994
ApeKI	GCWGC	6 cut(s)	441, 807, 1404, 1894, 1942, 2171
ApoI	RAATTY	7 cut(s)	171, 318, 358, 476, 835, 1337, 2091
ArsI	GACNNNNNNTTYG	2 cut(s)	1520, 1552
AsiGI	ACCGGT	1 cut(s)	326
AspLEI	GCGC	2 cut(s)	1515, 2018
AsuC2I	CCSGG	3 cut(s)	1038, 1869, 1870
AsuHPI	GGTGA	2 cut(s)	662, 778
AvaI	CYCGRG	4 cut(s)	451, 1192, 1868, 1994
AvaII	GGWCC	7 cut(s)	246, 329, 1116, 1704, 1865, 1924, 2107
AxyI	CCTNAGG	1 cut(s)	710
BaeGI	GKGCMC	1 cut(s)	1506
BalI	TGGCCA	1 cut(s)	1457
BanI	GGYRCC	3 cut(s)	1512, 2041, 2116
BbsI	GAAGAC	4 cut(s)	30, 886, 1614, 1881
Bbv12I	GWGCWC	1 cut(s)	185
BbvCI	CCTCAGC	1 cut(s)	1120
BbvI	GCAGC	6 cut(s)	453, 819, 1416, 1881, 1929, 2183
BccI	CCATC	6 cut(s)	377, 740, 1433, 1466, 1674, 1855
BceAI	ACGGC	1 cut(s)	2132
BciT130I	CCWGG	5 cut(s)	680, 912, 957, 1233, 1310
BcnI	CCSGG	3 cut(s)	1038, 1869, 1870
BcoDI	GTCTC	4 cut(s)	465, 770, 921, 1560
BcuI	ACTAGT	1 cut(s)	149
BfaI	CTAG	6 cut(s)	150, 159, 377, 1358, 1583, 2189
BfmI	CTRYAG	1 cut(s)	1017
BfoI	RGCGCY	1 cut(s)	1516
BglI	GCCNNNNNGGC	1 cut(s)	2193
BlpI	GCTNAGC	1 cut(s)	1292
Bme1390I	CCNGG	8 cut(s)	680, 912, 957, 1038, 1233, 1310, 1869, 1870
Bme18I	GGWCC	7 cut(s)	246, 329, 1116, 1704, 1865, 1924, 2107
BmeRI	GACNNNNNGTC	1 cut(s)	1795
BmeT110I	CYCGRG	4 cut(s)	451, 1192, 1868, 1994
BmgBI	CACGTC	1 cut(s)	1969
BmrFI	CCNGG	8 cut(s)	680, 912, 957, 1038, 1233, 1310, 1869, 1870
BmrI	ACTGGG	1 cut(s)	1518
BmsI	GCATC	2 cut(s)	468, 2270
BmuI	ACTGGG	1 cut(s)	1518
BoxI	GACNNNNGTC	1 cut(s)	1194
BpiI	GAAGAC	4 cut(s)	30, 886, 1614, 1881
BpmI	CTGGAG	1 cut(s)	298
Bpu10I	CCTNAGC	1 cut(s)	1120
Bpu1102I	GCTNAGC	1 cut(s)	1292
BpuEI	CTTGAG	2 cut(s)	323, 1571
BpuMI	CCSGG	3 cut(s)	1038, 1869, 1870
BsaHI	GRCGYC	2 cut(s)	1513, 2129
BsaWI	WCCGGW	1 cut(s)	326
BsaXI	ACNNNNNCTCC	4 cut(s)	604, 634, 1055, 1085
Bsc4I	CCNNNNNNNGG	6 cut(s)	685, 962, 1007, 1192, 1238, 1453
Bse118I	RCCGGY	1 cut(s)	326
Bse1I	ACTGG	5 cut(s)	205, 523, 1274, 1349, 1513
Bse21I	CCTNAGG	1 cut(s)	710
Bse3DI	GCAATG	1 cut(s)	935
BseBI	CCWGG	5 cut(s)	680, 912, 957, 1233, 1310
BseGI	GGATG	3 cut(s)	48, 1210, 1799
BseLI	CCNNNNNNNGG	6 cut(s)	685, 962, 1007, 1192, 1238, 1453
BseMI	GCAATG	1 cut(s)	935
BseMII	CTCAG	7 cut(s)	361, 701, 1134, 1392, 1428, 1920, 2208
BseNI	ACTGG	5 cut(s)	205, 523, 1274, 1349, 1513
BseRI	GAGGAG	1 cut(s)	469
BseSI	GKGCMC	1 cut(s)	1506
BseXI	GCAGC	6 cut(s)	453, 819, 1416, 1881, 1929, 2183
BseYI	CCCAGC	1 cut(s)	852
BsgI	GTGCAG	1 cut(s)	600
Bsh1236I	CGCG	3 cut(s)	1733, 1788, 2018
Bsh1285I	CGRYCG	1 cut(s)	242
BshNI	GGYRCC	3 cut(s)	1512, 2041, 2116
BshTI	ACCGGT	1 cut(s)	326
BsiEI	CGRYCG	1 cut(s)	242
BsiHKAI	GWGCWC	1 cut(s)	185
BsiHKCI	CYCGRG	4 cut(s)	451, 1192, 1868, 1994
BsiSI	CCGG	4 cut(s)	327, 332, 1037, 1869
BslFI	GGGAC	6 cut(s)	310, 400, 1024, 1411, 1754, 1851
BslI	CCNNNNNNNGG	6 cut(s)	685, 962, 1007, 1192, 1238, 1453
BsmAI	GTCTC	4 cut(s)	465, 770, 921, 1560
BsmFI	GGGAC	6 cut(s)	310, 400, 1024, 1411, 1754, 1851
BsmI	GAATGC	1 cut(s)	1713
BsoBI	CYCGRG	4 cut(s)	451, 1192, 1868, 1994
Bsp1286I	GDGCHC	2 cut(s)	185, 1506
Bsp1407I	TGTACA	1 cut(s)	1971
Bsp143I	GATC	2 cut(s)	12, 1677
Bsp1720I	GCTNAGC	1 cut(s)	1292
BspCNI	CTCAG	7 cut(s)	360, 702, 1133, 1391, 1427, 1921, 2209
BspFNI	CGCG	3 cut(s)	1733, 1788, 2018
BspHI	TCATGA	2 cut(s)	267, 1660
BspT107I	GGYRCC	3 cut(s)	1512, 2041, 2116
BsrDI	GCAATG	1 cut(s)	935
BsrFI	RCCGGY	1 cut(s)	326
BsrGI	TGTACA	1 cut(s)	1971
BsrI	ACTGG	5 cut(s)	205, 523, 1274, 1349, 1513
BssAI	RCCGGY	1 cut(s)	326
BssMI	GATC	2 cut(s)	12, 1677
BssNI	GRCGYC	2 cut(s)	1513, 2129
BssT1I	CCWWGG	2 cut(s)	684, 1833
Bst2UI	CCWGG	5 cut(s)	680, 912, 957, 1233, 1310
Bst6I	CTCTTC	1 cut(s)	919
BstACI	GRCGYC	2 cut(s)	1513, 2129
BstAUI	TGTACA	1 cut(s)	1971
BstC8I	GCNNGC	7 cut(s)	407, 1467, 1502, 1711, 1899, 1906, 2227
BstDSI	CCRYGG	1 cut(s)	2148
BstENI	CCTNNNNNAGG	1 cut(s)	1236
BstF5I	GGATG	3 cut(s)	48, 1210, 1799
BstFNI	CGCG	3 cut(s)	1733, 1788, 2018
BstH2I	RGCGCY	1 cut(s)	1516
BstHHI	GCGC	2 cut(s)	1515, 2018
BstKTI	GATC	2 cut(s)	15, 1680
BstMAI	GTCTC	4 cut(s)	465, 770, 921, 1560
BstMBI	GATC	2 cut(s)	12, 1677
BstMCI	CGRYCG	1 cut(s)	242
BstNI	CCWGG	5 cut(s)	680, 912, 957, 1233, 1310
BstNSI	RCATGY	2 cut(s)	307, 1762
BstPAI	GACNNNNGTC	1 cut(s)	1194
BstSCI	CCNGG	8 cut(s)	678, 910, 955, 1036, 1231, 1308, 1867, 1868
BstSFI	CTRYAG	1 cut(s)	1017
BstSLI	GKGCMC	1 cut(s)	1506
BstUI	CGCG	3 cut(s)	1733, 1788, 2018
BstV1I	GCAGC	6 cut(s)	453, 819, 1416, 1881, 1929, 2183
BstV2I	GAAGAC	4 cut(s)	30, 886, 1614, 1881
Bsu36I	CCTNAGG	1 cut(s)	710
BtgI	CCRYGG	1 cut(s)	2148
BtgZI	GCGATG	2 cut(s)	445, 2247
BtrI	CACGTC	1 cut(s)	1969
BtsCI	GGATG	3 cut(s)	48, 1210, 1799
BtsI	GCAGTG	2 cut(s)	416, 471
BtsIMutI	CAGTG	9 cut(s)	416, 471, 516, 904, 1038, 1281, 1356, 1506, 1537
Cac8I	GCNNGC	7 cut(s)	407, 1467, 1502, 1711, 1899, 1906, 2227
CciI	TCATGA	2 cut(s)	267, 1660
CfoI	GCGC	2 cut(s)	1515, 2018
Cfr10I	RCCGGY	1 cut(s)	326
Cfr9I	CCCGGG	1 cut(s)	1868
CpoI	CGGWCCG	1 cut(s)	329
CseI	GACGC	4 cut(s)	1470, 1619, 1739, 2137
Csp6I	GTAC	4 cut(s)	147, 1639, 1762, 1972
CspAI	ACCGGT	1 cut(s)	326
CspCI	CAANNNNNGTGG	4 cut(s)	1260, 1295, 2034, 2069
CspI	CGGWCCG	1 cut(s)	329
CviQI	GTAC	4 cut(s)	147, 1639, 1762, 1972
DinI	GGCGCC	1 cut(s)	1514
DpnI	GATC	2 cut(s)	14, 1679
DpnII	GATC	2 cut(s)	12, 1677
DrdI	GACNNNNNNGTC	2 cut(s)	304, 479
DriI	GACNNNNNGTC	1 cut(s)	1795
DseDI	GACNNNNNNGTC	2 cut(s)	304, 479
EaeI	YGGCCR	2 cut(s)	1455, 1734
Eam1104I	CTCTTC	1 cut(s)	919
Eam1105I	GACNNNNNGTC	1 cut(s)	1795
EarI	CTCTTC	1 cut(s)	919
Eco130I	CCWWGG	2 cut(s)	684, 1833
Eco147I	AGGCCT	2 cut(s)	715, 2206
Eco32I	GATATC	1 cut(s)	1210
Eco47I	GGWCC	7 cut(s)	246, 329, 1116, 1704, 1865, 1924, 2107
Eco57I	CTGAAG	2 cut(s)	736, 880
Eco81I	CCTNAGG	1 cut(s)	710
Eco88I	CYCGRG	4 cut(s)	451, 1192, 1868, 1994
EcoNI	CCTNNNNNAGG	1 cut(s)	1236
EcoO109I	RGGNCCY	3 cut(s)	246, 1116, 1865
EcoRI	GAATTC	1 cut(s)	171
EcoRII	CCWGG	5 cut(s)	678, 910, 955, 1231, 1308
EcoRV	GATATC	1 cut(s)	1210
EcoT14I	CCWWGG	2 cut(s)	684, 1833
EgeI	GGCGCC	1 cut(s)	1514
EheI	GGCGCC	1 cut(s)	1514
ErhI	CCWWGG	2 cut(s)	684, 1833
FalI	AAGNNNNNCTT	4 cut(s)	763, 795, 1710, 1742
FaqI	GGGAC	6 cut(s)	310, 400, 1024, 1411, 1754, 1851
FauI	CCCGC	2 cut(s)	812, 1493
FblI	GTMKAC	1 cut(s)	1419
FokI	GGATG	3 cut(s)	35, 1217, 1786
FspBI	CTAG	6 cut(s)	150, 159, 377, 1358, 1583, 2189
GlaI	GCGC	2 cut(s)	1514, 2017
GsaI	CCCAGC	1 cut(s)	856
GsuI	CTGGAG	1 cut(s)	298
HaeII	RGCGCY	1 cut(s)	1516
HapII	CCGG	4 cut(s)	327, 332, 1037, 1869
HgaI	GACGC	4 cut(s)	1470, 1619, 1739, 2137
HhaI	GCGC	2 cut(s)	1515, 2018
Hin1I	GRCGYC	2 cut(s)	1513, 2129
Hin6I	GCGC	2 cut(s)	1513, 2016
HinP1I	GCGC	2 cut(s)	1513, 2016
HincII	GTYRAC	1 cut(s)	998
HindII	GTYRAC	1 cut(s)	998
HinfI	GANTC	9 cut(s)	1064, 1182, 1190, 1472, 1553, 1579, 1880, 2020, 2285
HpaII	CCGG	4 cut(s)	327, 332, 1037, 1869
HphI	GGTGA	2 cut(s)	662, 778
Hpy166II	GTNNAC	6 cut(s)	309, 672, 977, 998, 1420, 1972
Hpy188I	TCNGA	7 cut(s)	85, 120, 350, 496, 503, 1381, 1843
Hpy188III	TCNNGA	8 cut(s)	67, 268, 451, 1156, 1179, 1213, 1661, 2277
Hpy8I	GTNNAC	6 cut(s)	309, 672, 977, 998, 1420, 1972
Hpy99I	CGWCG	1 cut(s)	2131
HpyAV	CCTTC	5 cut(s)	640, 793, 1667, 2107, 2217
HpyCH4IV	ACGT	2 cut(s)	1968, 2052
HpyCH4V	TGCA	8 cut(s)	516, 581, 602, 940, 1164, 1535, 1945, 2225
HpySE526I	ACGT	2 cut(s)	1968, 2052
Hsp92I	GRCGYC	2 cut(s)	1513, 2129
HspAI	GCGC	2 cut(s)	1513, 2016
KasI	GGCGCC	1 cut(s)	1512
KflI	GGGWCCC	1 cut(s)	1865
Kzo9I	GATC	2 cut(s)	12, 1677
LmnI	GCTCC	3 cut(s)	456, 1074, 1313
Lsp1109I	GCAGC	6 cut(s)	453, 819, 1416, 1881, 1929, 2183
LweI	GCATC	2 cut(s)	468, 2270
MaeI	CTAG	6 cut(s)	150, 159, 377, 1358, 1583, 2189
MaeII	ACGT	2 cut(s)	1968, 2052
MaeIII	GTNAC	5 cut(s)	508, 650, 1916, 1964, 2162
MalI	GATC	2 cut(s)	14, 1679
MboI	GATC	2 cut(s)	12, 1677
MhlI	GDGCHC	2 cut(s)	185, 1506
MlsI	TGGCCA	1 cut(s)	1457
MluNI	TGGCCA	1 cut(s)	1457
Mly113I	GGCGCC	1 cut(s)	1513
MlyI	GAGTC	5 cut(s)	1073, 1184, 1562, 1889, 2294
MmeI	TCCRAC	3 cut(s)	1260, 1794, 1827
Mox20I	TGGCCA	1 cut(s)	1457
MscI	TGGCCA	1 cut(s)	1457
MseI	TTAA	1 cut(s)	770
MslI	CAYNNNNRTG	4 cut(s)	464, 576, 1718, 2028
Msp20I	TGGCCA	1 cut(s)	1457
MspA1I	CMGCKG	1 cut(s)	1894
MspI	CCGG	4 cut(s)	327, 332, 1037, 1869
MspR9I	CCNGG	8 cut(s)	680, 912, 957, 1038, 1233, 1310, 1869, 1870
Mva1269I	GAATGC	1 cut(s)	1713
MvaI	CCWGG	5 cut(s)	680, 912, 957, 1233, 1310
MvnI	CGCG	3 cut(s)	1733, 1788, 2018
NarI	GGCGCC	1 cut(s)	1513
NciI	CCSGG	3 cut(s)	1038, 1869, 1870
NdeII	GATC	2 cut(s)	12, 1677
NmuCI	GTSAC	2 cut(s)	650, 1964
NspI	RCATGY	2 cut(s)	307, 1762
PaeR7I	CTCGAG	2 cut(s)	451, 1994
PagI	TCATGA	2 cut(s)	267, 1660
PceI	AGGCCT	2 cut(s)	715, 2206
PciI	ACATGT	2 cut(s)	303, 1758
PctI	GAATGC	1 cut(s)	1713
PfeI	GAWTC	4 cut(s)	1182, 1472, 1579, 2020
PflMI	CCANNNNNTGG	1 cut(s)	962
PinAI	ACCGGT	1 cut(s)	326
PleI	GAGTC	5 cut(s)	1072, 1184, 1561, 1888, 2293
PluTI	GGCGCC	1 cut(s)	1516
PpsI	GAGTC	5 cut(s)	1072, 1184, 1561, 1888, 2293
PpuMI	RGGWCCY	3 cut(s)	246, 1116, 1865
PscI	ACATGT	2 cut(s)	303, 1758
PshAI	GACNNNNGTC	1 cut(s)	1194
Psp5II	RGGWCCY	3 cut(s)	246, 1116, 1865
Psp6I	CCWGG	5 cut(s)	678, 910, 955, 1231, 1308
PspFI	CCCAGC	1 cut(s)	852
PspGI	CCWGG	5 cut(s)	678, 910, 955, 1231, 1308
PspPPI	RGGWCCY	3 cut(s)	246, 1116, 1865
PspXI	VCTCGAGB	1 cut(s)	1994
RsaI	GTAC	4 cut(s)	148, 1640, 1763, 1973
RsaNI	GTAC	4 cut(s)	147, 1639, 1762, 1972
RseI	CAYNNNNRTG	4 cut(s)	464, 576, 1718, 2028
Rsr2I	CGGWCCG	1 cut(s)	329
RsrII	CGGWCCG	1 cut(s)	329
SaqAI	TTAA	1 cut(s)	770
Sau3AI	GATC	2 cut(s)	12, 1677
SchI	GAGTC	5 cut(s)	1073, 1184, 1562, 1889, 2294
ScrFI	CCNGG	8 cut(s)	680, 912, 957, 1038, 1233, 1310, 1869, 1870
SduI	GDGCHC	2 cut(s)	185, 1506
SfaNI	GCATC	2 cut(s)	468, 2270
SfcI	CTRYAG	1 cut(s)	1017
SfoI	GGCGCC	1 cut(s)	1514
Sfr274I	CTCGAG	2 cut(s)	451, 1994
SinI	GGWCC	7 cut(s)	246, 329, 1116, 1704, 1865, 1924, 2107
SlaI	CTCGAG	2 cut(s)	451, 1994
SmaI	CCCGGG	1 cut(s)	1870
SmiMI	CAYNNNNRTG	4 cut(s)	464, 576, 1718, 2028
SmlI	CTYRAG	4 cut(s)	338, 451, 1550, 1994
SmoI	CTYRAG	4 cut(s)	338, 451, 1550, 1994
SpeI	ACTAGT	1 cut(s)	149
SseBI	AGGCCT	2 cut(s)	715, 2206
SspDI	GGCGCC	1 cut(s)	1512
SspI	AATATT	1 cut(s)	1626
SspMI	CTAG	6 cut(s)	150, 159, 377, 1358, 1583, 2189
StuI	AGGCCT	2 cut(s)	715, 2206
StyD4I	CCNGG	8 cut(s)	678, 910, 955, 1036, 1231, 1308, 1867, 1868
StyI	CCWWGG	2 cut(s)	684, 1833
TaiI	ACGT	2 cut(s)	1971, 2055
TaqI	TCGA	9 cut(s)	68, 452, 795, 830, 1198, 1212, 1588, 1746, 1995
TatI	WGTACW	3 cut(s)	146, 1638, 1971
TauI	GCSGC	6 cut(s)	375, 1291, 1736, 1894, 1904, 2122
TfiI	GAWTC	4 cut(s)	1182, 1472, 1579, 2020
Tru1I	TTAA	1 cut(s)	770
Tru9I	TTAA	1 cut(s)	770
TscAI	CASTG	9 cut(s)	416, 471, 523, 904, 1038, 1281, 1356, 1513, 1537
TseFI	GTSAC	2 cut(s)	650, 1964
TseI	GCWGC	6 cut(s)	441, 807, 1404, 1894, 1942, 2171
Tsp45I	GTSAC	2 cut(s)	650, 1964
TspMI	CCCGGG	1 cut(s)	1868
TspRI	CASTG	9 cut(s)	416, 471, 523, 904, 1038, 1281, 1356, 1513, 1537
Van91I	CCANNNNNTGG	1 cut(s)	962
VpaK11BI	GGWCC	7 cut(s)	246, 329, 1116, 1704, 1865, 1924, 2107
XagI	CCTNNNNNAGG	1 cut(s)	1236
XapI	RAATTY	7 cut(s)	171, 318, 358, 476, 835, 1337, 2091
XceI	RCATGY	2 cut(s)	307, 1762
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1810
XhoI	CTCGAG	2 cut(s)	451, 1994
XmaI	CCCGGG	1 cut(s)	1868
XmiI	GTMKAC	1 cut(s)	1419
XspI	CTAG	6 cut(s)	150, 159, 377, 1358, 1583, 2189

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.