AT5G51410

Luc7-like protein 3

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0005092
Physical Location & Seq
Reverse (-)
20880558 .. 20883908
3351 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G51410.3

Sequence Viewer

Length: 1005 bp
ATGGATGCTCAGCGAGCTCTGTTGGACGAACTAATGGGCGCAGCTCGTAATCTGACAGACGAAGAGAGAAGAGGGTTCAAGGAGGTTAAGTGGGACGATAGAGAAGTATGTGCATTCTATATGGTTCGATTTTGTCCTCATGACCTCTTTGTTAACACGAAAAGCGATCTTGGAGCATGCTCGAGAATTCATGATCCAAAGTTGAAAGAAAGCTTCGAGAACTCTCCGAGGCATGATTCCTATGTGCCTAAATTCGAGGCTGAGCTTGCACAGTTTTGCGAGAAGTTGGTGAATGATCTTGATAGGAAAGTTAGGCGTGGGCGAGAACGTCTTGCACAAGAAGTTGAACCGGTTCCACCACCTTCTCTATCAGCAGAGAAAGCTGAACAATTGTCTGTCTTGGAGGAGAAAGTTAAGAACCTTTTGGAACAAGTGGAAGCACTTGGTGAAGAAGGCAAAGTGGATGAAGCTGAAGCGCTAATGAGGAAGGTGGAAGGGCTAAATGCTGAGAAGACAGTGTTGTTACAACGACCAACTGACAAGGTACTCGCGATGGCTCAGGAGAAGAAGATGGCATTGTGTGAGGTTTGTGGTTCATTTCTTGTGGCTAATGATGCAGTAGAAAGAACACAGTCTCATGTCACTGGAAAGCAACATGTTGGCTATGGCTTGGTTCGGGATTTTATTGCTGAACAAAAAGCTGCTAAAGATAAAGGAAAGGAAGAAGAAAGACTAGTAAGAGGAAAAGAAGCAGATGATAAGAGGAAACCAAGGGAGAAGGAAAGCGAGAGTAAGAGGAGTGGTTCTAGTGATAGAGAAAGATATCGTGATCGAGACCGAAACAGAGATGGTGACAGACACAGAGACCGTGGTAGAGATTATAGAAAGCCTTATGACAGGAGATCGAGGAGTGGGAGAGAGGACCGAGATCGAAGCAGGTCACGATCTCCTCATGGAAGGTCTGGTCACAGAAGGGTGTCGAGAAGCCCCATTCGCCAATACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LUC7

Protein Analysis

334

Amino Acids

38.72

Weight (kDa)

9.07

Isoelectric Point (pI)

50.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LUC7 PF03194 2 - 247 1.4e-85 LUC7 N_terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 927
AccII CGCG 1 cut(s) 551
AclWI GGATC 1 cut(s) 188
AcsI RAATTY 2 cut(s) 186, 251
AcuI CTGAAG 1 cut(s) 492
AdeI CACNNNGTG 1 cut(s) 446
AfaI GTAC 1 cut(s) 546
AfeI AGCGCT 1 cut(s) 477
AflIII ACRYGT 1 cut(s) 655
AgeI ACCGGT 1 cut(s) 349
AgsI TTSAA 3 cut(s) 79, 205, 347
AhlI ACTAGT 1 cut(s) 733
AluBI AGCT 7 cut(s) 17, 44, 213, 265, 383, 470, 701
AluI AGCT 7 cut(s) 17, 44, 213, 265, 383, 470, 701
Alw21I GWGCWC 1 cut(s) 19
Alw26I GTCTC 3 cut(s) 639, 828, 858
AlwI GGATC 1 cut(s) 188
Ama87I CYCGRG 1 cut(s) 181
Aor51HI AGCGCT 1 cut(s) 477
ApeKI GCWGC 2 cut(s) 41, 701
ApoI RAATTY 2 cut(s) 186, 251
AsiGI ACCGGT 1 cut(s) 349
Asp700I GAANNNNTTC 1 cut(s) 351
AspLEI GCGC 2 cut(s) 41, 478
AspS9I GGNCC 1 cut(s) 922
AsuHPI GGTGA 3 cut(s) 301, 458, 863
AvaI CYCGRG 1 cut(s) 181
AvaII GGWCC 1 cut(s) 922
BanII GRGCYC 1 cut(s) 19
BbsI GAAGAC 1 cut(s) 518
Bbv12I GWGCWC 1 cut(s) 19
BbvI GCAGC 2 cut(s) 53, 688
BccI CCATC 3 cut(s) 547, 565, 842
BcoDI GTCTC 3 cut(s) 639, 828, 858
BcuI ACTAGT 1 cut(s) 733
BfaI CTAG 3 cut(s) 734, 807, 1003
BfoI RGCGCY 1 cut(s) 479
BfuAI ACCTGC 1 cut(s) 927
BisI GCNGC 2 cut(s) 42, 702
BlpI GCTNAGC 2 cut(s) 9, 261
BlsI GCNGC 2 cut(s) 43, 703
Bme18I GGWCC 1 cut(s) 922
BmeT110I CYCGRG 1 cut(s) 181
BmgT120I GGNCC 1 cut(s) 922
BmiI GGNNCC 1 cut(s) 354
BmsI GCATC 1 cut(s) 604
BpiI GAAGAC 1 cut(s) 518
Bpu10I CCTNAGC 1 cut(s) 558
Bpu1102I GCTNAGC 2 cut(s) 9, 261
BsaI GGTCTC 2 cut(s) 828, 858
BsaJI CCNNGG 3 cut(s) 227, 770, 868
BsaWI WCCGGW 1 cut(s) 349
BsaXI ACNNNNNCTCC 2 cut(s) 74, 104
Bse118I RCCGGY 1 cut(s) 349
Bse1I ACTGG 1 cut(s) 649
BseDI CCNNGG 3 cut(s) 227, 770, 868
BseGI GGATG 2 cut(s) 10, 469
BseMII CTCAG 4 cut(s) 23, 252, 498, 572
BseNI ACTGG 1 cut(s) 649
BseRI GAGGAG 4 cut(s) 419, 811, 922, 939
BseXI GCAGC 2 cut(s) 53, 688
Bsh1236I CGCG 1 cut(s) 551
BshTI ACCGGT 1 cut(s) 349
BsiHKAI GWGCWC 1 cut(s) 19
BsiHKCI CYCGRG 1 cut(s) 181
BsiSI CCGG 1 cut(s) 350
BslFI GGGAC 1 cut(s) 107
BsmAI GTCTC 3 cut(s) 639, 828, 858
BsmFI GGGAC 1 cut(s) 107
BsmI GAATGC 1 cut(s) 113
Bso31I GGTCTC 2 cut(s) 828, 858
BsoBI CYCGRG 1 cut(s) 181
Bsp1286I GDGCHC 1 cut(s) 19
Bsp143I GATC 7 cut(s) 166, 193, 295, 829, 902, 928, 944
Bsp1720I GCTNAGC 2 cut(s) 9, 261
Bsp68I TCGCGA 1 cut(s) 551
BspCNI CTCAG 4 cut(s) 22, 253, 499, 571
BspFNI CGCG 1 cut(s) 551
BspHI TCATGA 2 cut(s) 139, 190
BspLI GGNNCC 1 cut(s) 354
BspMI ACCTGC 1 cut(s) 927
BspPI GGATC 1 cut(s) 188
BspTNI GGTCTC 2 cut(s) 828, 858
BsrFI RCCGGY 1 cut(s) 349
BsrI ACTGG 1 cut(s) 649
BssAI RCCGGY 1 cut(s) 349
BssECI CCNNGG 3 cut(s) 227, 770, 868
BssMI GATC 7 cut(s) 166, 193, 295, 829, 902, 928, 944
BssT1I CCWWGG 1 cut(s) 770
Bst4CI ACNGT 4 cut(s) 273, 517, 633, 869
Bst6I CTCTTC 2 cut(s) 57, 64
BstC8I GCNNGC 3 cut(s) 15, 178, 267
BstDEI CTNAG 4 cut(s) 9, 261, 507, 558
BstDSI CCRYGG 1 cut(s) 868
BstF5I GGATG 2 cut(s) 10, 469
BstFNI CGCG 1 cut(s) 551
BstH2I RGCGCY 1 cut(s) 479
BstHHI GCGC 2 cut(s) 41, 478
BstKTI GATC 7 cut(s) 169, 196, 298, 832, 905, 931, 947
BstMAI GTCTC 3 cut(s) 639, 828, 858
BstMBI GATC 7 cut(s) 166, 193, 295, 829, 902, 928, 944
BstMWI GCNNNNNNNGC 5 cut(s) 14, 266, 380, 614, 993
BstNSI RCATGY 2 cut(s) 180, 659
BstUI CGCG 1 cut(s) 551
BstV1I GCAGC 2 cut(s) 53, 688
BstV2I GAAGAC 1 cut(s) 518
BtgI CCRYGG 1 cut(s) 868
BtgZI GCGATG 1 cut(s) 566
BtsCI GGATG 2 cut(s) 10, 469
BtsIMutI CAGTG 2 cut(s) 522, 642
BtuMI TCGCGA 1 cut(s) 551
BveI ACCTGC 1 cut(s) 927
Cac8I GCNNGC 3 cut(s) 15, 178, 267
CciI TCATGA 2 cut(s) 139, 190
CfoI GCGC 2 cut(s) 41, 478
Cfr10I RCCGGY 1 cut(s) 349
Cfr13I GGNCC 1 cut(s) 922
Csp6I GTAC 1 cut(s) 545
CspAI ACCGGT 1 cut(s) 349
CviAII CATG 7 cut(s) 140, 177, 191, 233, 638, 656, 953
CviQI GTAC 1 cut(s) 545
DdeI CTNAG 4 cut(s) 9, 261, 507, 558
DpnI GATC 7 cut(s) 168, 195, 297, 831, 904, 930, 946
DpnII GATC 7 cut(s) 166, 193, 295, 829, 902, 928, 944
DraIII CACNNNGTG 1 cut(s) 446
Eam1104I CTCTTC 2 cut(s) 57, 64
EarI CTCTTC 2 cut(s) 57, 64
Ecl136II GAGCTC 1 cut(s) 17
Eco130I CCWWGG 1 cut(s) 770
Eco24I GRGCYC 1 cut(s) 19
Eco31I GGTCTC 2 cut(s) 828, 858
Eco32I GATATC 1 cut(s) 824
Eco47I GGWCC 1 cut(s) 922
Eco47III AGCGCT 1 cut(s) 477
Eco53kI GAGCTC 1 cut(s) 17
Eco57I CTGAAG 1 cut(s) 492
Eco88I CYCGRG 1 cut(s) 181
EcoICRI GAGCTC 1 cut(s) 17
EcoRI GAATTC 1 cut(s) 186
EcoRV GATATC 1 cut(s) 824
EcoT14I CCWWGG 1 cut(s) 770
EcoT38I GRGCYC 1 cut(s) 19
ErhI CCWWGG 1 cut(s) 770
FaeI CATG 7 cut(s) 143, 180, 194, 236, 641, 659, 956
FaqI GGGAC 1 cut(s) 107
FatI CATG 7 cut(s) 139, 176, 190, 232, 637, 655, 952
Fnu4HI GCNGC 2 cut(s) 42, 702
FokI GGATG 2 cut(s) 17, 476
FriOI GRGCYC 1 cut(s) 19
Fsp4HI GCNGC 2 cut(s) 42, 702
FspBI CTAG 3 cut(s) 734, 807, 1003
GlaI GCGC 2 cut(s) 40, 477
GluI GCNGC 2 cut(s) 42, 702
HaeII RGCGCY 1 cut(s) 479
HapII CCGG 1 cut(s) 350
HhaI GCGC 2 cut(s) 41, 478
Hin1II CATG 7 cut(s) 143, 180, 194, 236, 641, 659, 956
Hin6I GCGC 2 cut(s) 39, 476
HinP1I GCGC 2 cut(s) 39, 476
HincII GTYRAC 1 cut(s) 154
HindII GTYRAC 1 cut(s) 154
HindIII AAGCTT 1 cut(s) 211
HinfI GANTC 1 cut(s) 236
HpaI GTTAAC 1 cut(s) 154
HpaII CCGG 1 cut(s) 350
HphI GGTGA 3 cut(s) 301, 458, 863
Hpy166II GTNNAC 1 cut(s) 154
Hpy188I TCNGA 2 cut(s) 54, 228
Hpy8I GTNNAC 1 cut(s) 154
HpyAV CCTTC 7 cut(s) 372, 446, 481, 488, 772, 951, 966
HpyCH4III ACNGT 4 cut(s) 273, 517, 633, 869
HpyCH4IV ACGT 1 cut(s) 328
HpyCH4V TGCA 4 cut(s) 113, 269, 335, 617
HpyF10VI GCNNNNNNNGC 5 cut(s) 14, 266, 380, 614, 993
HpyF3I CTNAG 4 cut(s) 9, 261, 507, 558
HpySE526I ACGT 1 cut(s) 328
Hsp92II CATG 7 cut(s) 143, 180, 194, 236, 641, 659, 956
HspAI GCGC 2 cut(s) 39, 476
KspAI GTTAAC 1 cut(s) 154
Kzo9I GATC 7 cut(s) 166, 193, 295, 829, 902, 928, 944
LmnI GCTCC 1 cut(s) 173
LpnPI CCDG 6 cut(s) 363, 545, 630, 883, 922, 948
Lsp1109I GCAGC 2 cut(s) 53, 688
LweI GCATC 1 cut(s) 604
MaeI CTAG 3 cut(s) 734, 807, 1003
MaeII ACGT 1 cut(s) 328
MaeIII GTNAC 5 cut(s) 522, 640, 851, 939, 965
MalI GATC 7 cut(s) 168, 195, 297, 831, 904, 930, 946
MboI GATC 7 cut(s) 166, 193, 295, 829, 902, 928, 944
MboII GAAGA 8 cut(s) 74, 81, 461, 523, 577, 580, 734, 737
MfeI CAATTG 1 cut(s) 389
MhlI GDGCHC 1 cut(s) 19
MluCI AATT 3 cut(s) 186, 251, 389
MroXI GAANNNNTTC 1 cut(s) 351
MseI TTAA 3 cut(s) 87, 153, 414
MspI CCGG 1 cut(s) 350
MunI CAATTG 1 cut(s) 389
Mva1269I GAATGC 1 cut(s) 113
MvnI CGCG 1 cut(s) 551
MwoI GCNNNNNNNGC 5 cut(s) 14, 266, 380, 614, 993
NdeII GATC 7 cut(s) 166, 193, 295, 829, 902, 928, 944
NlaIII CATG 7 cut(s) 143, 180, 194, 236, 641, 659, 956
NlaIV GGNNCC 1 cut(s) 354
NmuCI GTSAC 4 cut(s) 640, 851, 939, 965
NruI TCGCGA 1 cut(s) 551
NspI RCATGY 2 cut(s) 180, 659
PaeI GCATGC 1 cut(s) 180
PaeR7I CTCGAG 1 cut(s) 181
PagI TCATGA 2 cut(s) 139, 190
PciI ACATGT 1 cut(s) 655
PctI GAATGC 1 cut(s) 113
PdmI GAANNNNTTC 1 cut(s) 351
PfeI GAWTC 1 cut(s) 236
PinAI ACCGGT 1 cut(s) 349
PkrI GCNGC 2 cut(s) 43, 703
PscI ACATGT 1 cut(s) 655
Psp124BI GAGCTC 1 cut(s) 19
PspN4I GGNNCC 1 cut(s) 354
PspPI GGNCC 1 cut(s) 922
RruI TCGCGA 1 cut(s) 551
RsaI GTAC 1 cut(s) 546
RsaNI GTAC 1 cut(s) 545
SacI GAGCTC 1 cut(s) 19
SaqAI TTAA 3 cut(s) 87, 153, 414
SatI GCNGC 2 cut(s) 42, 702
Sau3AI GATC 7 cut(s) 166, 193, 295, 829, 902, 928, 944
Sau96I GGNCC 1 cut(s) 922
SduI GDGCHC 1 cut(s) 19
SfaNI GCATC 1 cut(s) 604
Sfr274I CTCGAG 1 cut(s) 181
SinI GGWCC 1 cut(s) 922
SlaI CTCGAG 1 cut(s) 181
SmlI CTYRAG 1 cut(s) 181
SmoI CTYRAG 1 cut(s) 181
SpeI ACTAGT 1 cut(s) 733
SphI GCATGC 1 cut(s) 180
Sse9I AATT 3 cut(s) 186, 251, 389
SspMI CTAG 3 cut(s) 734, 807, 1003
SstI GAGCTC 1 cut(s) 19
StyI CCWWGG 1 cut(s) 770
TaaI ACNGT 4 cut(s) 273, 517, 633, 869
TaiI ACGT 1 cut(s) 331
TaqI TCGA 8 cut(s) 127, 182, 216, 255, 832, 905, 931, 980
TaqII GACCGA 2 cut(s) 852, 939
TasI AATT 3 cut(s) 186, 251, 389
TfiI GAWTC 1 cut(s) 236
Tru1I TTAA 3 cut(s) 87, 153, 414
Tru9I TTAA 3 cut(s) 87, 153, 414
TscAI CASTG 2 cut(s) 522, 649
TseFI GTSAC 4 cut(s) 640, 851, 939, 965
TseI GCWGC 2 cut(s) 41, 701
Tsp45I GTSAC 4 cut(s) 640, 851, 939, 965
TspDTI ATGAA 3 cut(s) 179, 480, 585
TspRI CASTG 2 cut(s) 522, 649
VpaK11BI GGWCC 1 cut(s) 922
XapI RAATTY 2 cut(s) 186, 251
XceI RCATGY 2 cut(s) 180, 659
XhoI CTCGAG 1 cut(s) 181
XmnI GAANNNNTTC 1 cut(s) 351
XspI CTAG 3 cut(s) 734, 807, 1003
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.