MD07G1253500.v1.1

Luc7-like protein 3

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0005092
Physical Location & Seq
Forward (+)
32089828 .. 32094385
4558 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1253500.v1.1.491

Sequence Viewer

Length: 1035 bp
ATGGATGCTCAGAGAGCTCTGCTGGACGAACTTATGGGCTCAGCTCGTAATTTGACGGAGGAGGAGAGAAGGGGGTACAAGGAAATTACTTGGGATGATAAGGAGGTTTGTGGAGCCTATATGGTTCGATTTTGTCCCCACGATCTCTTCGTTAACACTCGAAGCGATCTAGGACCTTGCCCTAAACTACATGACCCAAAGTTGAAAGAAAGTTTTGAAGAGTCCCCGCGGCATGATGCTTATGTGCCCAAGTTTGAAGCTGAACTTGCTCACTTTTGTGAGAAGTTGGTGATGGATTTAGATAGAAGAGTAAAGCGTGGGCGAGAACGCCTTGCTCAGGAGGTGGAACCTGCACCAGCACCTCCACTGTCAGCTGAAAAGTCCGAACAGCTCTCTGTTCTGGAGGAAAAGATAAAGAACTTACTGGAACAAGCAGAGGCTCTAGGTGAAGCTGGAAAGGTGGATGAAGCTGAAGCACTGATGAGAAAGGTGGATATGCTCAATTCTGAGAAGACAGCATTGGCTCAGCCCCAGAATGATAAAGTGTTGATGCTGGCACAGGAGAAAAAAATGGCACTTTGTGAGATCTGTGGTTCATTTCTAGTGGCCAATGATGCTGTAGAGAGAACTCAGTCGCATGTTACGGGGAAGCAGCATATTGGTTATGGCATGGTTCGTGATTTTATCGCTGAGTTCAAGGAATCCAAGGAGAAGGCAAGGGAAGAAGAAAGGTTAGCGAGGGAGAAAGAGGCAGAAGAACGGAGGAAACAGAGGGAGAAGGAAGAGGAGAATAGAAGGAGAAGTAATTCAAGTGATAGGGACAGGTACCGTGATAGAGATCGTGACAGGGAGCGGGACAGATATCGAGAACGAGACTTGGATCGTGAAAGGTCGAGGGAGTGGAATGGCAGAAGTAGTAGGGATGGAGGGAGAGGGGTGGACAGGAGGTCCAGGAATGGAAGAGATGGAGGCAGGGATAGGTACCATGATCGAAGCAGGTCACGTTCCCCTGTTAGGCACAGTCACAGGAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LUC7

Protein Analysis

345

Amino Acids

40.39

Weight (kDa)

8.13

Isoelectric Point (pI)

55.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LUC7 PF03194 2 - 249 3.8e-88 LUC7 N_terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 358, 987
Acc65I GGTACC 2 cut(s) 825, 981
AccB1I GGYRCC 2 cut(s) 825, 981
AccBSI CCGCTC 1 cut(s) 853
AccII CGCG 1 cut(s) 229
AciI CCGC 3 cut(s) 227, 229, 853
AclWI GGATC 1 cut(s) 888
AcoI YGGCCR 1 cut(s) 606
AcuI CTGAAG 1 cut(s) 492
AdeI CACNNNGTG 1 cut(s) 581
AfaI GTAC 3 cut(s) 77, 827, 983
AfiI CCNNNNNNNGG 2 cut(s) 337, 1014
AgsI TTSAA 5 cut(s) 205, 218, 257, 697, 810
AhdI GACNNNNNGTC 1 cut(s) 946
AjnI CCWGG 1 cut(s) 950
AjuI GAANNNNNNNTTGG 2 cut(s) 503, 535
AleI CACNNNNGTG 1 cut(s) 276
AluBI AGCT 7 cut(s) 17, 44, 260, 374, 391, 452, 470
AluI AGCT 7 cut(s) 17, 44, 260, 374, 391, 452, 470
Alw21I GWGCWC 1 cut(s) 19
Alw26I GTCTC 1 cut(s) 867
AlwI GGATC 1 cut(s) 888
AoxI GGCC 1 cut(s) 606
ApeKI GCWGC 1 cut(s) 652
Asp700I GAANNNNTTC 1 cut(s) 805
Asp718I GGTACC 2 cut(s) 825, 981
AspS9I GGNCC 2 cut(s) 173, 948
AsuHPI GGTGA 2 cut(s) 301, 458
AvaII GGWCC 2 cut(s) 173, 948
BaeGI GKGCMC 1 cut(s) 249
BalI TGGCCA 1 cut(s) 608
BanI GGYRCC 2 cut(s) 825, 981
BanII GRGCYC 2 cut(s) 19, 41
BbsI GAAGAC 1 cut(s) 518
Bbv12I GWGCWC 1 cut(s) 19
BbvI GCAGC 1 cut(s) 664
BccI CCATC 3 cut(s) 286, 917, 959
BciT130I CCWGG 1 cut(s) 952
BcoDI GTCTC 1 cut(s) 867
BfaI CTAG 3 cut(s) 170, 443, 602
BfmI CTRYAG 1 cut(s) 618
BfuAI ACCTGC 2 cut(s) 358, 987
BglII AGATCT 1 cut(s) 585
BisI GCNGC 2 cut(s) 230, 653
BlpI GCTNAGC 2 cut(s) 40, 525
BlsI GCNGC 2 cut(s) 231, 654
Bme1390I CCNGG 1 cut(s) 952
Bme18I GGWCC 2 cut(s) 173, 948
BmeRI GACNNNNNGTC 1 cut(s) 946
BmgT120I GGNCC 2 cut(s) 173, 948
BmiI GGNNCC 4 cut(s) 115, 348, 827, 983
BmrFI CCNGG 1 cut(s) 952
BmsI GCATC 3 cut(s) 226, 540, 604
BpiI GAAGAC 1 cut(s) 518
BpmI CTGGAG 1 cut(s) 422
Bpu10I CCTNAGC 1 cut(s) 336
Bpu1102I GCTNAGC 2 cut(s) 40, 525
BsaBI GATNNNNATC 1 cut(s) 837
BsaJI CCNNGG 2 cut(s) 227, 705
Bsc4I CCNNNNNNNGG 2 cut(s) 337, 1014
Bse1I ACTGG 1 cut(s) 429
Bse8I GATNNNNATC 1 cut(s) 837
BseBI CCWGG 1 cut(s) 952
BseDI CCNNGG 2 cut(s) 227, 705
BseGI GGATG 4 cut(s) 10, 100, 469, 928
BseJI GATNNNNATC 1 cut(s) 837
BseLI CCNNNNNNNGG 2 cut(s) 337, 1014
BseMII CTCAG 7 cut(s) 23, 54, 350, 498, 539, 644, 681
BseNI ACTGG 1 cut(s) 429
BseRI GAGGAG 3 cut(s) 74, 77, 800
BseSI GKGCMC 1 cut(s) 249
BseXI GCAGC 1 cut(s) 664
BsgI GTGCAG 1 cut(s) 336
Bsh1236I CGCG 1 cut(s) 229
BshFI GGCC 1 cut(s) 608
BshNI GGYRCC 2 cut(s) 825, 981
BsiHKAI GWGCWC 1 cut(s) 19
BslFI GGGAC 4 cut(s) 120, 208, 833, 869
BslI CCNNNNNNNGG 2 cut(s) 337, 1014
BsmAI GTCTC 1 cut(s) 867
BsmFI GGGAC 4 cut(s) 120, 208, 833, 869
BsnI GGCC 1 cut(s) 608
Bsp1286I GDGCHC 3 cut(s) 19, 41, 249
Bsp143I GATC 6 cut(s) 142, 166, 585, 838, 880, 988
Bsp1720I GCTNAGC 2 cut(s) 40, 525
BspACI CCGC 3 cut(s) 227, 229, 853
BspANI GGCC 1 cut(s) 608
BspCNI CTCAG 7 cut(s) 22, 53, 349, 499, 538, 643, 682
BspFNI CGCG 1 cut(s) 229
BspLI GGNNCC 4 cut(s) 115, 348, 827, 983
BspMI ACCTGC 2 cut(s) 358, 987
BspPI GGATC 1 cut(s) 888
BspT107I GGYRCC 2 cut(s) 825, 981
BsrBI CCGCTC 1 cut(s) 853
BsrI ACTGG 1 cut(s) 429
BssECI CCNNGG 2 cut(s) 227, 705
BssMI GATC 6 cut(s) 142, 166, 585, 838, 880, 988
BssT1I CCWWGG 1 cut(s) 705
Bst2UI CCWGG 1 cut(s) 952
Bst4CI ACNGT 3 cut(s) 369, 830, 1022
Bst6I CTCTTC 5 cut(s) 152, 213, 301, 777, 955
BstC8I GCNNGC 1 cut(s) 555
BstDEI CTNAG 7 cut(s) 9, 40, 336, 507, 525, 630, 690
BstDSI CCRYGG 1 cut(s) 227
BstENI CCTNNNNNAGG 1 cut(s) 335
BstF5I GGATG 4 cut(s) 10, 100, 469, 928
BstFNI CGCG 1 cut(s) 229
BstKTI GATC 6 cut(s) 145, 169, 588, 841, 883, 991
BstMAI GTCTC 1 cut(s) 867
BstMBI GATC 6 cut(s) 142, 166, 585, 838, 880, 988
BstMWI GCNNNNNNNGC 3 cut(s) 14, 266, 614
BstNI CCWGG 1 cut(s) 952
BstNSI RCATGY 1 cut(s) 641
BstSCI CCNGG 1 cut(s) 950
BstSFI CTRYAG 1 cut(s) 618
BstSLI GKGCMC 1 cut(s) 249
BstUI CGCG 1 cut(s) 229
BstV1I GCAGC 1 cut(s) 664
BstV2I GAAGAC 1 cut(s) 518
BstX2I RGATCY 1 cut(s) 585
BstYI RGATCY 1 cut(s) 585
BsuRI GGCC 1 cut(s) 608
BtgI CCRYGG 1 cut(s) 227
BtsCI GGATG 4 cut(s) 10, 100, 469, 928
BtsIMutI CAGTG 2 cut(s) 365, 476
BveI ACCTGC 2 cut(s) 358, 987
Cac8I GCNNGC 1 cut(s) 555
Cfr13I GGNCC 2 cut(s) 173, 948
Cfr42I CCGCGG 1 cut(s) 230
Csp6I GTAC 3 cut(s) 76, 826, 982
CviAII CATG 5 cut(s) 191, 233, 638, 670, 986
CviQI GTAC 3 cut(s) 76, 826, 982
DdeI CTNAG 7 cut(s) 9, 40, 336, 507, 525, 630, 690
DpnI GATC 6 cut(s) 144, 168, 587, 840, 882, 990
DpnII GATC 6 cut(s) 142, 166, 585, 838, 880, 988
DraIII CACNNNGTG 1 cut(s) 581
DriI GACNNNNNGTC 1 cut(s) 946
EaeI YGGCCR 1 cut(s) 606
Eam1104I CTCTTC 5 cut(s) 152, 213, 301, 777, 955
Eam1105I GACNNNNNGTC 1 cut(s) 946
EarI CTCTTC 5 cut(s) 152, 213, 301, 777, 955
Ecl136II GAGCTC 1 cut(s) 17
Eco130I CCWWGG 1 cut(s) 705
Eco24I GRGCYC 2 cut(s) 19, 41
Eco32I GATATC 1 cut(s) 863
Eco47I GGWCC 2 cut(s) 173, 948
Eco53kI GAGCTC 1 cut(s) 17
Eco57I CTGAAG 1 cut(s) 492
EcoICRI GAGCTC 1 cut(s) 17
EcoNI CCTNNNNNAGG 1 cut(s) 335
EcoO109I RGGNCCY 1 cut(s) 173
EcoRII CCWGG 1 cut(s) 950
EcoRV GATATC 1 cut(s) 863
EcoT14I CCWWGG 1 cut(s) 705
EcoT38I GRGCYC 2 cut(s) 19, 41
ErhI CCWWGG 1 cut(s) 705
FaeI CATG 5 cut(s) 194, 236, 641, 673, 989
FalI AAGNNNNNCTT 2 cut(s) 249, 281
FaqI GGGAC 4 cut(s) 120, 208, 833, 869
FatI CATG 5 cut(s) 190, 232, 637, 669, 985
FauI CCCGC 2 cut(s) 234, 846
Fnu4HI GCNGC 2 cut(s) 230, 653
FokI GGATG 4 cut(s) 17, 107, 476, 935
FriOI GRGCYC 2 cut(s) 19, 41
Fsp4HI GCNGC 2 cut(s) 230, 653
FspBI CTAG 3 cut(s) 170, 443, 602
GluI GCNGC 2 cut(s) 230, 653
GsuI CTGGAG 1 cut(s) 422
HaeIII GGCC 1 cut(s) 608
Hin1II CATG 5 cut(s) 194, 236, 641, 673, 989
HincII GTYRAC 1 cut(s) 154
HindII GTYRAC 1 cut(s) 154
HinfI GANTC 2 cut(s) 221, 701
HpaI GTTAAC 1 cut(s) 154
HphI GGTGA 2 cut(s) 301, 458
Hpy166II GTNNAC 2 cut(s) 154, 940
Hpy188I TCNGA 3 cut(s) 12, 385, 508
Hpy188III TCNNGA 6 cut(s) 338, 401, 677, 842, 866, 884
Hpy8I GTNNAC 2 cut(s) 154, 940
HpyAV CCTTC 4 cut(s) 63, 706, 772, 789
HpyCH4III ACNGT 3 cut(s) 369, 830, 1022
HpyCH4IV ACGT 1 cut(s) 1003
HpyCH4V TGCA 1 cut(s) 353
HpyF10VI GCNNNNNNNGC 3 cut(s) 14, 266, 614
HpyF3I CTNAG 7 cut(s) 9, 40, 336, 507, 525, 630, 690
HpySE526I ACGT 1 cut(s) 1003
Hsp92II CATG 5 cut(s) 194, 236, 641, 673, 989
KpnI GGTACC 2 cut(s) 829, 985
KspAI GTTAAC 1 cut(s) 154
KspI CCGCGG 1 cut(s) 230
Kzo9I GATC 6 cut(s) 142, 166, 585, 838, 880, 988
LmnI GCTCC 2 cut(s) 113, 850
Lsp1109I GCAGC 1 cut(s) 664
LweI GCATC 3 cut(s) 226, 540, 604
MaeI CTAG 3 cut(s) 170, 443, 602
MaeII ACGT 1 cut(s) 1003
MaeIII GTNAC 4 cut(s) 640, 842, 999, 1022
MalI GATC 6 cut(s) 144, 168, 587, 840, 882, 990
MbiI CCGCTC 1 cut(s) 853
MboI GATC 6 cut(s) 142, 166, 585, 838, 880, 988
MboII GAAGA 9 cut(s) 139, 230, 318, 523, 734, 737, 767, 794, 972
MflI RGATCY 1 cut(s) 585
MhlI GDGCHC 3 cut(s) 19, 41, 249
MlsI TGGCCA 1 cut(s) 608
MluCI AATT 4 cut(s) 49, 84, 502, 805
MluNI TGGCCA 1 cut(s) 608
MlyI GAGTC 1 cut(s) 230
Mox20I TGGCCA 1 cut(s) 608
MroXI GAANNNNTTC 1 cut(s) 805
MscI TGGCCA 1 cut(s) 608
MseI TTAA 1 cut(s) 153
MslI CAYNNNNRTG 1 cut(s) 276
Msp20I TGGCCA 1 cut(s) 608
MspA1I CMGCKG 2 cut(s) 229, 374
MspR9I CCNGG 1 cut(s) 952
MvaI CCWGG 1 cut(s) 952
MvnI CGCG 1 cut(s) 229
MwoI GCNNNNNNNGC 3 cut(s) 14, 266, 614
NdeII GATC 6 cut(s) 142, 166, 585, 838, 880, 988
NlaIII CATG 5 cut(s) 194, 236, 641, 673, 989
NlaIV GGNNCC 4 cut(s) 115, 348, 827, 983
NmuCI GTSAC 3 cut(s) 842, 999, 1022
NspI RCATGY 1 cut(s) 641
OliI CACNNNNGTG 1 cut(s) 276
PcsI WCGNNNNNNNCGW 1 cut(s) 147
PdmI GAANNNNTTC 1 cut(s) 805
PfeI GAWTC 1 cut(s) 701
PfoI TCCNGGA 1 cut(s) 950
PkrI GCNGC 2 cut(s) 231, 654
PleI GAGTC 1 cut(s) 229
PpsI GAGTC 1 cut(s) 229
PpuMI RGGWCCY 1 cut(s) 173
Psp124BI GAGCTC 1 cut(s) 19
Psp5II RGGWCCY 1 cut(s) 173
Psp6I CCWGG 1 cut(s) 950
PspGI CCWGG 1 cut(s) 950
PspN4I GGNNCC 4 cut(s) 115, 348, 827, 983
PspPI GGNCC 2 cut(s) 173, 948
PspPPI RGGWCCY 1 cut(s) 173
PsuI RGATCY 1 cut(s) 585
PvuII CAGCTG 1 cut(s) 374
RsaI GTAC 3 cut(s) 77, 827, 983
RsaNI GTAC 3 cut(s) 76, 826, 982
RseI CAYNNNNRTG 1 cut(s) 276
SacI GAGCTC 1 cut(s) 19
SacII CCGCGG 1 cut(s) 230
SaqAI TTAA 1 cut(s) 153
SatI GCNGC 2 cut(s) 230, 653
Sau3AI GATC 6 cut(s) 142, 166, 585, 838, 880, 988
Sau96I GGNCC 2 cut(s) 173, 948
SchI GAGTC 1 cut(s) 230
ScrFI CCNGG 1 cut(s) 952
SduI GDGCHC 3 cut(s) 19, 41, 249
SfaNI GCATC 3 cut(s) 226, 540, 604
SfcI CTRYAG 1 cut(s) 618
Sfr303I CCGCGG 1 cut(s) 230
SgrBI CCGCGG 1 cut(s) 230
SinI GGWCC 2 cut(s) 173, 948
SmiMI CAYNNNNRTG 1 cut(s) 276
Sse9I AATT 4 cut(s) 49, 84, 502, 805
SsiI CCGC 3 cut(s) 227, 229, 853
SspMI CTAG 3 cut(s) 170, 443, 602
SstI GAGCTC 1 cut(s) 19
StyD4I CCNGG 1 cut(s) 950
StyI CCWWGG 1 cut(s) 705
TaaI ACNGT 3 cut(s) 369, 830, 1022
TaiI ACGT 1 cut(s) 1006
TaqI TCGA 5 cut(s) 127, 160, 865, 893, 991
TasI AATT 4 cut(s) 49, 84, 502, 805
TauI GCSGC 1 cut(s) 232
TfiI GAWTC 1 cut(s) 701
Tru1I TTAA 1 cut(s) 153
Tru9I TTAA 1 cut(s) 153
TscAI CASTG 2 cut(s) 372, 483
TseFI GTSAC 3 cut(s) 842, 999, 1022
TseI GCWGC 1 cut(s) 652
Tsp45I GTSAC 3 cut(s) 842, 999, 1022
TspDTI ATGAA 2 cut(s) 480, 585
TspGWI ACGGA 2 cut(s) 71, 775
TspRI CASTG 2 cut(s) 372, 483
VpaK11BI GGWCC 2 cut(s) 173, 948
XagI CCTNNNNNAGG 1 cut(s) 335
XceI RCATGY 1 cut(s) 641
XmnI GAANNNNTTC 1 cut(s) 805
XspI CTAG 3 cut(s) 170, 443, 602
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.