AT5G53890
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0010431
Physical Location & Seq
Forward (+)
21876586 .. 21880540
3955 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G53890.1

Sequence Viewer

Length: 3111 bp
ATGGTGATCATTCTCCTATTGGTCTTCTTTGTTGGTTCTTCTGTGAGCCAACCATGTCATCCCAACGACTTATCTGCGCTCCGGGAATTGGCAGGAGCGTTGAAGAACAAGTCTGTTACAGAATCTTGGTTAAATGGTTCACGTTGTTGTGAATGGGATGGTGTGTTTTGTGAAGGGAGTGATGTTTCTGGTCGAGTTACAAAGTTGGTTTTACCTGAAAAAGGTTTGGAAGGTGTGATTTCGAAGTCTTTAGGGGAGTTGACTGAGCTGCGAGTACTTGATCTATCTCGTAACCAGCTTAAAGGCGAAGTACCAGCGGAGATTTCTAAGTTAGAGCAGCTTCAAGTTCTTGATTTGAGTCATAACCTGTTATCAGGGTCTGTTTTGGGAGTGGTTTCGGGTTTAAAGCTGATTCAGTCGCTGAACATTTCGAGCAATTCGCTTAGCGGGAAGTTATCGGATGTTGGAGTGTTTCCTGGTCTTGTGATGCTTAATGTAAGCAACAATTTGTTTGAGGGTGAGATTCATCCTGAACTCTGTAGCTCATCTGGTGGGATACAGGTTCTTGATTTATCGATGAATCGTTTGGTGGGGAATCTTGATGGCTTGTACAACTGCAGCAAATCTATTCAACAGCTCCATATCGACAGCAACAGATTGACGGGCCAACTTCCGGATTATCTTTATTCGATCCGGGAGTTGGAGCAACTATCACTCTCTGGAAACTACTTATCCGGAGAGTTAAGCAAGAACTTGAGCAATCTCTCTGGTCTGAAGTCTCTGTTGATATCAGAGAACCGGTTTTCGGATGTAATTCCAGATGTTTTTGGTAACCTCACTCAATTGGAACACCTCGACGTGAGCTCCAACAAGTTCTCGGGAAGGTTTCCGCCAAGTTTATCCCAATGCTCGAAGCTGCGGGTTCTTGATCTTAGGAACAACTCGTTATCCGGTTCTATCAATCTTAACTTCACTGGATTTACCGATCTTTGCGTGCTTGATCTCGCCAGTAATCATTTCTCTGGACCTCTTCCTGATTCCCTTGGCCACTGTCCCAAGATGAAGATCTTGAGTTTGGCGAAAAACGAGTTTCGCGGCAAAATCCCTGACACCTTCAAGAATCTGCAGTCTCTCTTGTTCCTGTCCTTATCCAACAACAGCTTTGTGGATTTTTCTGAGACAATGAATGTGCTGCAACATTGCAGAAACCTCTCCACTCTTATTCTCTCAAAGAACTTCATCGGCGAGGAAATACCAAACAACGTCACTGGTTTCGACAACCTCGCGATTTTAGCGCTAGGAAATTGCGGTCTTAGAGGTCAGATTCCGAGCTGGCTATTGAACTGCAAGAAGCTGGAAGTTCTTGATCTCTCTTGGAATCACTTTTACGGAACTATCCCTCATTGGATTGGTAAGATGGAGAGTTTGTTCTACATAGACTTCTCAAACAACACTTTGACCGGAGCAATCCCGGTAGCCATAACCGAGCTCAAGAACCTAATCCGTCTAAACGGAACCGCTTCTCAGATGACCGACTCTTCTGGAATTCCTCTCTACGTAAAGCGGAACAAGAGCTCCAACGGTCTTCCATATAACCAAGTTTCAAGATTCCCGCCATCTATCTATTTGAATAATAACCGTCTCAACGGGACGATCTTGCCAGAGATAGGACGTTTGAAAGAGCTTCACATGCTGGACTTGAGCAGGAACAACTTCACTGGGACGATACCTGATTCCATTTCAGGGCTTGACAATTTGGAGGTTCTTGATTTATCTTACAATCATCTCTACGGTTCGATTCCTCTGTCTTTTCAGAGTCTCACTTTCTTGTCGAGGTTCAGCGTAGCGTATAACCGTCTCACTGGCGCGATTCCATCTGGAGGTCAGTTCTACAGCTTCCCGCACTCAAGCTTCGAAGGAAACTTAGGACTTTGTCGCGCGATTGATTCTCCTTGCGATGTTCTGATGAGTAACATGTTGAATCCGAAAGGTTCTTCGCGTAGGAATAACAATGGCGGAAAGTTCGGGAGAAGCAGCATTGTTGTACTTACCATAAGTCTAGCCATTGGGATTACTCTACTTCTTTCTGTTATTCTGTTAAGGATTTCAAGAAAAGATGTGGATGATCGAATCAATGACGTTGATGAGGAGACTATCAGCGGGGTTTCGAAAGCTCTCGGGCCATCAAAGATTGTGCTTTTCCATAGCTGTGGATGTAAAGATCTAAGTGTTGAGGAGTTGTTGAAGTCTACGAACAATTTCAGCCAGGCTAACATTATAGGATGTGGCGGATTTGGTCTTGTGTACAAAGCTAATTTTCCCGATGGCTCGAAAGCAGCAGTCAAGAGGCTTTCTGGTGACTGTGGGCAGATGGAACGTGAATTCCAAGCGGAAGTTGAAGCATTGTCTCGAGCGGAACATAAGAATCTAGTCTCTCTTCAAGGCTACTGCAAGCATGGAAACGATAGGCTGCTTATTTACTCGTTTATGGAGAATGGAAGTTTGGATTATTGGCTGCATGAGCGGGTAGATGGGAATATGACTCTTATATGGGATGTGAGATTGAAGATAGCTCAAGGCGCAGCGCGAGGGCTTGCTTACTTGCATAAAGTCTGTGAACCTAATGTTATACATAGGGATGTGAAGTCTAGTAACATTTTGTTAGATGAGAAGTTTGAAGCTCATCTTGCGGATTTTGGGTTAGCGAGGTTGCTTAGGCCGTATGATACTCACGTGACGACTGATTTGGTTGGGACATTGGGTTATATTCCTCCTGAGTATAGCCAGTCTTTGATTGCAACATGTAGAGGAGACGTTTACAGTTTTGGCGTTGTGCTTTTGGAGCTAGTTACGGGTCGTAGACCTGTAGAAGTCTGTAAAGGGAAAAGTTGCAGAGATTTGGTGTCTCGGGTGTTTCAAATGAAGGCTGAGAAGCGTGAAGCTGAGCTTATCGATACAACAATACGCGAAAATGTGAACGAGAGAACGGTTTTGGAGATGTTGGAGATTGCTTGCAAATGCATTGATCATGAGCCTAGAAGGAGACCACTGATCGAAGAAGTCGTTACTTGGCTTGAAGATCTTCCTATGGAGTCTGTTCAACAACAATGA

Protein Analysis

1036

Amino Acids

114.34

Weight (kDa)

6.1

Isoelectric Point (pI)

32.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 20 - 57 9.4e-07 Leucine rich repeat N-terminal domain
LRR_8 PF13855 65 - 124 4.4e-08 Leucine rich repeat
LRR_4 PF12799 88 - 124 9.7e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 89 - 148 8.6e-08 Leucine rich repeat
LRR_8 PF13855 232 - 292 3.1e-08 Leucine rich repeat
LRR_8 PF13855 257 - 316 2.6e-10 Leucine rich repeat
LRR_14 PF23598 297 - 413 4.5e-07 Leucine-rich repeat region
LRR_8 PF13855 305 - 363 6.6e-06 Leucine rich repeat
LRR_8 PF13855 331 - 387 6.8e-06 Leucine rich repeat
LRR_8 PF13855 541 - 596 4.1e-07 Leucine rich repeat
LRR_8 PF13855 561 - 620 8.9e-08 Leucine rich repeat
Pkinase PF00069 755 - 1022 3e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 757 - 1023 4.7e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 2414, 2524
AccI GTMKAC 2 cut(s) 2249, 2860
AccII CGCG 8 cut(s) 1095, 1286, 1868, 1938, 1940, 1999, 2587, 2967
AccIII TCCGGA 2 cut(s) 673, 734
AclWI GGATC 1 cut(s) 685
AcoI YGGCCR 1 cut(s) 1045
AcsI RAATTY 2 cut(s) 1545, 2381
AcuI CTGAAG 1 cut(s) 794
AcvI CACGTG 1 cut(s) 2734
AfaI GTAC 5 cut(s) 276, 312, 611, 2046, 2306
AfeI AGCGCT 1 cut(s) 1296
AfiI CCNNNNNNNGG 8 cut(s) 88, 221, 673, 700, 805, 1667, 1743, 1880
AflIII ACRYGT 2 cut(s) 1974, 2801
AgeI ACCGGT 1 cut(s) 798
AjiI CACGTC 1 cut(s) 859
AjnI CCWGG 2 cut(s) 475, 2265
AjuI GAANNNNNNNTTGG 2 cut(s) 2486, 2518
AloI GAACNNNNNNTCC 6 cut(s) 1412, 1444, 1559, 1591, 2367, 2399
Alw21I GWGCWC 3 cut(s) 866, 1491, 1577
AlwI GGATC 1 cut(s) 685
AlwNI CAGNNNCTG 2 cut(s) 380, 421
Ama87I CYCGRG 4 cut(s) 877, 2177, 2409, 2907
Aor13HI TCCGGA 2 cut(s) 673, 734
Aor51HI AGCGCT 1 cut(s) 1296
AoxI GGCC 4 cut(s) 664, 1045, 2180, 2717
ApoI RAATTY 2 cut(s) 1545, 2381
ArsI GACNNNNNNTTYG 2 cut(s) 2728, 2760
AsiGI ACCGGT 1 cut(s) 798
Asp700I GAANNNNTTC 4 cut(s) 1519, 1712, 2258, 3081
AspLEI GCGC 6 cut(s) 79, 1297, 1868, 1940, 2582, 2587
AspS9I GGNCC 3 cut(s) 664, 1025, 2180
AsuC2I CCSGG 3 cut(s) 83, 695, 1472
AsuHPI GGTGA 3 cut(s) 16, 530, 2369
AsuII TTCGAA 3 cut(s) 242, 1914, 2168
AvaI CYCGRG 4 cut(s) 877, 2177, 2409, 2907
AvaII GGWCC 1 cut(s) 1025
BaeI ACNNNNGTAYC 2 cut(s) 2718, 2751
BalI TGGCCA 1 cut(s) 1047
BanII GRGCYC 3 cut(s) 866, 1491, 1577
BbrPI CACGTG 1 cut(s) 2734
BbsI GAAGAC 2 cut(s) 16, 1577
Bbv12I GWGCWC 3 cut(s) 866, 1491, 1577
BccI CCATC 9 cut(s) 152, 596, 1411, 1624, 1882, 2191, 2318, 2365, 2525
BceAI ACGGC 1 cut(s) 2704
BcgI CGANNNNNNTGC 2 cut(s) 56, 90
BciT130I CCWGG 2 cut(s) 477, 2267
BciVI GTATCC 1 cut(s) 549
BclI TGATCA 2 cut(s) 6, 3025
BcnI CCSGG 3 cut(s) 83, 695, 1472
BfaI CTAG 6 cut(s) 1298, 2060, 2429, 2649, 2846, 3036
BfmI CTRYAG 5 cut(s) 538, 616, 1124, 1891, 2865
BfoI RGCGCY 1 cut(s) 1298
BfuI GTATCC 1 cut(s) 549
BglII AGATCT 3 cut(s) 1065, 2221, 3079
BlpI GCTNAGC 2 cut(s) 443, 2943
BmcAI AGTACT 1 cut(s) 276
Bme1390I CCNGG 5 cut(s) 83, 477, 695, 1472, 2267
Bme18I GGWCC 1 cut(s) 1025
BmeT110I CYCGRG 4 cut(s) 877, 2177, 2409, 2907
BmgBI CACGTC 1 cut(s) 859
BmgT120I GGNCC 3 cut(s) 664, 1025, 2180
BmiI GGNNCC 1 cut(s) 1516
BmrFI CCNGG 5 cut(s) 83, 477, 695, 1472, 2267
BmrI ACTGGG 1 cut(s) 1728
BmsI GCATC 1 cut(s) 477
BmuI ACTGGG 1 cut(s) 1728
BpiI GAAGAC 2 cut(s) 16, 1577
BpmI CTGGAG 1 cut(s) 1899
Bpu10I CCTNAGC 1 cut(s) 2714
Bpu1102I GCTNAGC 2 cut(s) 443, 2943
Bpu14I TTCGAA 3 cut(s) 242, 1914, 2168
BpuEI CTTGAG 6 cut(s) 775, 1090, 1475, 1720, 1891, 2559
BpuMI CCSGG 3 cut(s) 83, 695, 1472
Bsa29I ATCGAT 2 cut(s) 575, 2952
BsaAI YACGTR 2 cut(s) 1558, 2734
BsaBI GATNNNNATC 1 cut(s) 1064
BsaI GGTCTC 1 cut(s) 3037
BsaJI CCNNGG 1 cut(s) 1042
BsaWI WCCGGW 5 cut(s) 673, 734, 798, 950, 1460
BsaXI ACNNNNNCTCC 6 cut(s) 848, 878, 1412, 1442, 1559, 1589
Bsc4I CCNNNNNNNGG 8 cut(s) 88, 221, 673, 700, 805, 1667, 1743, 1880
Bse118I RCCGGY 1 cut(s) 798
Bse1I ACTGG 6 cut(s) 979, 1008, 1273, 1723, 1867, 2785
Bse3DI GCAATG 1 cut(s) 1198
Bse8I GATNNNNATC 1 cut(s) 1064
BseAI TCCGGA 2 cut(s) 673, 734
BseBI CCWGG 2 cut(s) 477, 2267
BseCI ATCGAT 2 cut(s) 575, 2952
BseDI CCNNGG 1 cut(s) 1042
BseJI GATNNNNATC 1 cut(s) 1064
BseLI CCNNNNNNNGG 8 cut(s) 88, 221, 673, 700, 805, 1667, 1743, 1880
BseMI GCAATG 1 cut(s) 1198
BseMII CTCAG 6 cut(s) 255, 1167, 1538, 2766, 2919, 2934
BseNI ACTGG 6 cut(s) 979, 1008, 1273, 1723, 1867, 2785
BseRI GAGGAG 3 cut(s) 2162, 2249, 2823
Bsh1236I CGCG 8 cut(s) 1095, 1286, 1868, 1938, 1940, 1999, 2587, 2967
BshFI GGCC 4 cut(s) 666, 1047, 2182, 2719
BshTI ACCGGT 1 cut(s) 798
BshVI ATCGAT 2 cut(s) 575, 2952
BsiHKAI GWGCWC 3 cut(s) 866, 1491, 1577
BsiHKCI CYCGRG 4 cut(s) 877, 2177, 2409, 2907
BsiSI CCGG 8 cut(s) 82, 674, 694, 735, 799, 951, 1461, 1472
BslFI GGGAC 4 cut(s) 1038, 1663, 1735, 2767
BslI CCNNNNNNNGG 8 cut(s) 88, 221, 673, 700, 805, 1667, 1743, 1880
BsmBI CGTCTC 3 cut(s) 1646, 1862, 2805
BsmFI GGGAC 4 cut(s) 1038, 1663, 1735, 2767
BsnI GGCC 4 cut(s) 666, 1047, 2182, 2719
Bso31I GGTCTC 1 cut(s) 3037
BsoBI CYCGRG 4 cut(s) 877, 2177, 2409, 2907
Bsp119I TTCGAA 3 cut(s) 242, 1914, 2168
Bsp1286I GDGCHC 3 cut(s) 866, 1491, 1577
Bsp13I TCCGGA 2 cut(s) 673, 734
Bsp1407I TGTACA 2 cut(s) 609, 2304
Bsp1720I GCTNAGC 2 cut(s) 443, 2943
Bsp68I TCGCGA 1 cut(s) 1286
BspANI GGCC 4 cut(s) 666, 1047, 2182, 2719
BspCNI CTCAG 6 cut(s) 256, 1168, 1537, 2767, 2920, 2935
BspDI ATCGAT 2 cut(s) 575, 2952
BspEI TCCGGA 2 cut(s) 673, 734
BspFNI CGCG 8 cut(s) 1095, 1286, 1868, 1938, 1940, 1999, 2587, 2967
BspHI TCATGA 1 cut(s) 3028
BspLI GGNNCC 1 cut(s) 1516
BspMAI CTGCAG 2 cut(s) 620, 1128
BspPI GGATC 1 cut(s) 685
BspT104I TTCGAA 3 cut(s) 242, 1914, 2168
BspTNI GGTCTC 1 cut(s) 3037
BsrBI CCGCTC 2 cut(s) 2414, 2524
BsrDI GCAATG 1 cut(s) 1198
BsrFI RCCGGY 1 cut(s) 798
BsrGI TGTACA 2 cut(s) 609, 2304
BsrI ACTGG 6 cut(s) 979, 1008, 1273, 1723, 1867, 2785
BssAI RCCGGY 1 cut(s) 798
BssECI CCNNGG 1 cut(s) 1042
BssT1I CCWWGG 1 cut(s) 1042
Bst2UI CCWGG 2 cut(s) 477, 2267
Bst4CI ACNGT 8 cut(s) 1052, 1583, 1640, 1793, 1856, 2363, 2822, 2989
Bst6I CTCTTC 3 cut(s) 1035, 1543, 2442
BstAUI TGTACA 2 cut(s) 609, 2304
BstBAI YACGTR 2 cut(s) 1558, 2734
BstBI TTCGAA 3 cut(s) 242, 1914, 2168
BstC8I GCNNGC 5 cut(s) 995, 1334, 2453, 2595, 3013
BstEII GGTNACC 1 cut(s) 830
BstENI CCTNNNNNAGG 1 cut(s) 219
BstFNI CGCG 8 cut(s) 1095, 1286, 1868, 1938, 1940, 1999, 2587, 2967
BstH2I RGCGCY 1 cut(s) 1298
BstHHI GCGC 6 cut(s) 79, 1297, 1868, 1940, 2582, 2587
BstMWI GCNNNNNNNGC 6 cut(s) 1292, 1690, 2521, 2579, 2687, 2842
BstNI CCWGG 2 cut(s) 477, 2267
BstNSI RCATGY 3 cut(s) 1693, 1978, 2805
BstPI GGTNACC 1 cut(s) 830
BstSCI CCNGG 5 cut(s) 81, 475, 693, 1470, 2265
BstSFI CTRYAG 5 cut(s) 538, 616, 1124, 1891, 2865
BstSNI TACGTA 1 cut(s) 1558
BstUI CGCG 8 cut(s) 1095, 1286, 1868, 1938, 1940, 1999, 2587, 2967
BstV2I GAAGAC 2 cut(s) 16, 1577
BstX2I RGATCY 3 cut(s) 1065, 2221, 3079
BstXI CCANNNNNNTGG 1 cut(s) 2210
BstYI RGATCY 3 cut(s) 1065, 2221, 3079
Bsu15I ATCGAT 2 cut(s) 575, 2952
BsuI GTATCC 1 cut(s) 549
BsuRI GGCC 4 cut(s) 666, 1047, 2182, 2719
BsuTUI ATCGAT 2 cut(s) 575, 2952
BtgZI GCGATG 1 cut(s) 1971
BtrI CACGTC 1 cut(s) 859
BtsIMutI CAGTG 6 cut(s) 972, 1048, 1266, 1716, 1860, 3047
BtuMI TCGCGA 1 cut(s) 1286
Cac8I GCNNGC 5 cut(s) 995, 1334, 2453, 2595, 3013
CaiI CAGNNNCTG 2 cut(s) 380, 421
CciI TCATGA 1 cut(s) 3028
CfoI GCGC 6 cut(s) 79, 1297, 1868, 1940, 2582, 2587
Cfr10I RCCGGY 1 cut(s) 798
Cfr13I GGNCC 3 cut(s) 664, 1025, 2180
ClaI ATCGAT 2 cut(s) 575, 2952
Csp6I GTAC 5 cut(s) 275, 311, 610, 2045, 2305
CspAI ACCGGT 1 cut(s) 798
CviAII CATG 7 cut(s) 54, 1690, 1975, 2456, 2519, 2802, 3029
CviQI GTAC 5 cut(s) 275, 311, 610, 2045, 2305
DraI TTTAAA 1 cut(s) 405
EaeI YGGCCR 1 cut(s) 1045
Eam1104I CTCTTC 3 cut(s) 1035, 1543, 2442
EarI CTCTTC 3 cut(s) 1035, 1543, 2442
EciI GGCGGA 3 cut(s) 879, 2031, 2304
Ecl136II GAGCTC 3 cut(s) 864, 1489, 1575
Eco105I TACGTA 1 cut(s) 1558
Eco130I CCWWGG 1 cut(s) 1042
Eco24I GRGCYC 3 cut(s) 866, 1491, 1577
Eco31I GGTCTC 1 cut(s) 3037
Eco32I GATATC 1 cut(s) 789
Eco47I GGWCC 1 cut(s) 1025
Eco47III AGCGCT 1 cut(s) 1296
Eco53kI GAGCTC 3 cut(s) 864, 1489, 1575
Eco57I CTGAAG 1 cut(s) 794
Eco72I CACGTG 1 cut(s) 2734
Eco88I CYCGRG 4 cut(s) 877, 2177, 2409, 2907
Eco91I GGTNACC 1 cut(s) 830
EcoICRI GAGCTC 3 cut(s) 864, 1489, 1575
EcoNI CCTNNNNNAGG 1 cut(s) 219
EcoO65I GGTNACC 1 cut(s) 830
EcoRI GAATTC 2 cut(s) 1545, 2381
EcoRII CCWGG 2 cut(s) 475, 2265
EcoRV GATATC 1 cut(s) 789
EcoT14I CCWWGG 1 cut(s) 1042
EcoT22I ATGCAT 1 cut(s) 3023
EcoT38I GRGCYC 3 cut(s) 866, 1491, 1577
ErhI CCWWGG 1 cut(s) 1042
Esp3I CGTCTC 3 cut(s) 1646, 1862, 2805
FaeI CATG 7 cut(s) 57, 1693, 1978, 2459, 2522, 2805, 3032
FalI AAGNNNNNCTT 4 cut(s) 2670, 2702, 2931, 2963
FaqI GGGAC 4 cut(s) 1038, 1663, 1735, 2767
FatI CATG 7 cut(s) 53, 1689, 1974, 2455, 2518, 2801, 3028
FauI CCCGC 6 cut(s) 440, 912, 1620, 1908, 2153, 2517
FbaI TGATCA 2 cut(s) 6, 3025
FblI GTMKAC 2 cut(s) 2249, 2860
FriOI GRGCYC 3 cut(s) 866, 1491, 1577
FspBI CTAG 6 cut(s) 1298, 2060, 2429, 2649, 2846, 3036
GlaI GCGC 6 cut(s) 78, 1296, 1867, 1939, 2581, 2586
GsuI CTGGAG 1 cut(s) 1899
HaeII RGCGCY 1 cut(s) 1298
HaeIII GGCC 4 cut(s) 666, 1047, 2182, 2719
HapII CCGG 8 cut(s) 82, 674, 694, 735, 799, 951, 1461, 1472
HhaI GCGC 6 cut(s) 79, 1297, 1868, 1940, 2582, 2587
Hin1II CATG 7 cut(s) 57, 1693, 1978, 2459, 2522, 2805, 3032
Hin6I GCGC 6 cut(s) 77, 1295, 1866, 1938, 2580, 2585
HinP1I GCGC 6 cut(s) 77, 1295, 1866, 1938, 2580, 2585
HincII GTYRAC 1 cut(s) 261
HindII GTYRAC 1 cut(s) 261
HindIII AAGCTT 1 cut(s) 1909
HpaII CCGG 8 cut(s) 82, 674, 694, 735, 799, 951, 1461, 1472
HphI GGTGA 3 cut(s) 16, 530, 2369
Hpy166II GTNNAC 8 cut(s) 140, 261, 2250, 2305, 2618, 2818, 2861, 2977
Hpy8I GTNNAC 8 cut(s) 140, 261, 2250, 2305, 2618, 2818, 2861, 2977
Hpy99I CGWCG 1 cut(s) 860
HpyAV CCTTC 7 cut(s) 167, 224, 876, 1123, 1910, 2917, 3033
HpyCH4III ACNGT 8 cut(s) 1052, 1583, 1640, 1793, 1856, 2363, 2822, 2989
HpyCH4IV ACGT 9 cut(s) 142, 858, 1263, 1557, 1672, 2139, 2377, 2733, 2814
HpyF10VI GCNNNNNNNGC 6 cut(s) 1292, 1690, 2521, 2579, 2687, 2842
HpySE526I ACGT 9 cut(s) 142, 858, 1263, 1557, 1672, 2139, 2377, 2733, 2814
Hsp92II CATG 7 cut(s) 57, 1693, 1978, 2459, 2522, 2805, 3032
HspAI GCGC 6 cut(s) 77, 1295, 1866, 1938, 2580, 2585
Kpn2I TCCGGA 2 cut(s) 673, 734
Ksp22I TGATCA 2 cut(s) 6, 3025
LmnI GCTCC 8 cut(s) 84, 95, 642, 703, 869, 1463, 1580, 2842
LweI GCATC 1 cut(s) 477
MaeI CTAG 6 cut(s) 1298, 2060, 2429, 2649, 2846, 3036
MaeII ACGT 9 cut(s) 142, 858, 1263, 1557, 1672, 2139, 2377, 2733, 2814
MbiI CCGCTC 2 cut(s) 2414, 2524
MfeI CAATTG 1 cut(s) 842
MflI RGATCY 3 cut(s) 1065, 2221, 3079
MhlI GDGCHC 3 cut(s) 866, 1491, 1577
MlsI TGGCCA 1 cut(s) 1047
MluNI TGGCCA 1 cut(s) 1047
MlyI GAGTC 5 cut(s) 367, 1529, 1825, 2536, 3101
MmeI TCCRAC 6 cut(s) 445, 681, 891, 1176, 1602, 2982
Mox20I TGGCCA 1 cut(s) 1047
Mph1103I ATGCAT 1 cut(s) 3023
MroI TCCGGA 2 cut(s) 673, 734
MroXI GAANNNNTTC 4 cut(s) 1519, 1712, 2258, 3081
MscI TGGCCA 1 cut(s) 1047
MseI TTAA 7 cut(s) 131, 300, 404, 492, 743, 966, 2099
MslI CAYNNNNRTG 2 cut(s) 2208, 2637
Msp20I TGGCCA 1 cut(s) 1047
MspA1I CMGCKG 2 cut(s) 317, 2160
MspI CCGG 8 cut(s) 82, 674, 694, 735, 799, 951, 1461, 1472
MspR9I CCNGG 5 cut(s) 83, 477, 695, 1472, 2267
MteI GCGCNGCGC 1 cut(s) 2583
MunI CAATTG 1 cut(s) 842
MvaI CCWGG 2 cut(s) 477, 2267
MvnI CGCG 8 cut(s) 1095, 1286, 1868, 1938, 1940, 1999, 2587, 2967
MwoI GCNNNNNNNGC 6 cut(s) 1292, 1690, 2521, 2579, 2687, 2842
NciI CCSGG 3 cut(s) 83, 695, 1472
NlaIII CATG 7 cut(s) 57, 1693, 1978, 2459, 2522, 2805, 3032
NlaIV GGNNCC 1 cut(s) 1516
NmuCI GTSAC 3 cut(s) 1264, 2357, 2734
NruI TCGCGA 1 cut(s) 1286
NsiI ATGCAT 1 cut(s) 3023
NspI RCATGY 3 cut(s) 1693, 1978, 2805
NspV TTCGAA 3 cut(s) 242, 1914, 2168
PaeR7I CTCGAG 1 cut(s) 2409
PagI TCATGA 1 cut(s) 3028
PciI ACATGT 2 cut(s) 1974, 2801
PcsI WCGNNNNNNNCGW 1 cut(s) 3060
PdmI GAANNNNTTC 4 cut(s) 1519, 1712, 2258, 3081
PflFI GACNNNGTC 1 cut(s) 1932
PfoI TCCNGGA 2 cut(s) 81, 693
PinAI ACCGGT 1 cut(s) 798
PleI GAGTC 5 cut(s) 366, 1529, 1824, 2536, 3100
PmaCI CACGTG 1 cut(s) 2734
PmlI CACGTG 1 cut(s) 2734
PpsI GAGTC 5 cut(s) 366, 1529, 1824, 2536, 3100
Ppu21I YACGTR 2 cut(s) 1558, 2734
PscI ACATGT 2 cut(s) 1974, 2801
Psp124BI GAGCTC 3 cut(s) 866, 1491, 1577
Psp6I CCWGG 2 cut(s) 475, 2265
PspCI CACGTG 1 cut(s) 2734
PspEI GGTNACC 1 cut(s) 830
PspGI CCWGG 2 cut(s) 475, 2265
PspN4I GGNNCC 1 cut(s) 1516
PspPI GGNCC 3 cut(s) 664, 1025, 2180
PstI CTGCAG 2 cut(s) 620, 1128
PstNI CAGNNNCTG 2 cut(s) 380, 421
PsuI RGATCY 3 cut(s) 1065, 2221, 3079
PsyI GACNNNGTC 1 cut(s) 1932
RruI TCGCGA 1 cut(s) 1286
RsaI GTAC 5 cut(s) 276, 312, 611, 2046, 2306
RsaNI GTAC 5 cut(s) 275, 311, 610, 2045, 2305
RseI CAYNNNNRTG 2 cut(s) 2208, 2637
SacI GAGCTC 3 cut(s) 866, 1491, 1577
SaqAI TTAA 7 cut(s) 131, 300, 404, 492, 743, 966, 2099
Sau96I GGNCC 3 cut(s) 664, 1025, 2180
ScaI AGTACT 1 cut(s) 276
SchI GAGTC 5 cut(s) 367, 1529, 1825, 2536, 3101
ScrFI CCNGG 5 cut(s) 83, 477, 695, 1472, 2267
SduI GDGCHC 3 cut(s) 866, 1491, 1577
SfaNI GCATC 1 cut(s) 477
SfcI CTRYAG 5 cut(s) 538, 616, 1124, 1891, 2865
Sfr274I CTCGAG 1 cut(s) 2409
SfuI TTCGAA 3 cut(s) 242, 1914, 2168
SinI GGWCC 1 cut(s) 1025
SlaI CTCGAG 1 cut(s) 2409
SmiMI CAYNNNNRTG 2 cut(s) 2208, 2637
SmlI CTYRAG 7 cut(s) 754, 1069, 1490, 1699, 1906, 2409, 2574
SmoI CTYRAG 7 cut(s) 754, 1069, 1490, 1699, 1906, 2409, 2574
SnaBI TACGTA 1 cut(s) 1558
SspMI CTAG 6 cut(s) 1298, 2060, 2429, 2649, 2846, 3036
SstI GAGCTC 3 cut(s) 866, 1491, 1577
StyD4I CCNGG 5 cut(s) 81, 475, 693, 1470, 2265
StyI CCWWGG 1 cut(s) 1042
TaaI ACNGT 8 cut(s) 1052, 1583, 1640, 1793, 1856, 2363, 2822, 2989
TaiI ACGT 9 cut(s) 145, 861, 1266, 1560, 1675, 2142, 2380, 2736, 2817
TaqII GACCGA 1 cut(s) 1547
TatI WGTACW 4 cut(s) 274, 609, 2044, 2304
TauI GCSGC 1 cut(s) 1098
Tru1I TTAA 7 cut(s) 131, 300, 404, 492, 743, 966, 2099
Tru9I TTAA 7 cut(s) 131, 300, 404, 492, 743, 966, 2099
TscAI CASTG 6 cut(s) 979, 1055, 1273, 1723, 1867, 3054
TseFI GTSAC 3 cut(s) 1264, 2357, 2734
Tsp45I GTSAC 3 cut(s) 1264, 2357, 2734
TspDTI ATGAA 6 cut(s) 515, 593, 1076, 1199, 1228, 2936
TspGWI ACGGA 3 cut(s) 1404, 1493, 1527
TspRI CASTG 6 cut(s) 979, 1055, 1273, 1723, 1867, 3054
Tth111I GACNNNGTC 1 cut(s) 1932
VpaK11BI GGWCC 1 cut(s) 1025
XagI CCTNNNNNAGG 1 cut(s) 219
XapI RAATTY 2 cut(s) 1545, 2381
XceI RCATGY 3 cut(s) 1693, 1978, 2805
XhoI CTCGAG 1 cut(s) 2409
XmiI GTMKAC 2 cut(s) 2249, 2860
XmnI GAANNNNTTC 4 cut(s) 1519, 1712, 2258, 3081
XspI CTAG 6 cut(s) 1298, 2060, 2429, 2649, 2846, 3036
ZrmI AGTACT 1 cut(s) 276
Zsp2I ATGCAT 1 cut(s) 3023
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.