Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0012504

Physical Location & Seq

Genomic Coordinates Reverse (-)

26009521 .. 26012684

Gene Structure 3164 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G65110.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2079 bp

ATGGAATCGCGGCGAGAGAAGAATCCGATGACGGAGGAGGAATCTGATGGGCTAATTGCGGCGAGGCGGATCCAACGATTGTCTTTACACCTATCTCCCTCCTTGACGCCGTCGCCGTCGTTACCGTTGGTGCAGACGGAGACGTGTTCGGCGAGGTCGAAGAAGCTGGATGTCAACGGCGAAGCTTTGTCGCTGTATATGAGAGGAAAACATATAGATATACAAGAGAAAATTTTCGACTTTTTCAATTCCCGACCCGATTTGCAGACGCCGATCGAGATCTCCAAGGATGATCATCGGGAATTGTGTATGAATCAGCTTATAGGGCTTGTTAGAGAAGCTGGGGTAAGGCCGTTTAGGTATGTTGCTGATGATCCTGAGAAGTATTTCGCAATCATGGAAGCTGTTGGAAGTGTTGATATGTCCCTTGGGATTAAGATGGGCGTTCAATACAGTCTCTGGGGAGGCTCTGTGATCAATTTAGGGACTAAGAAGCATAGAGACAAGTATTTTGATGGCATTGACAATCTTGATTACACCGGTTGCTTTGCCATGACTGAATTACACCATGGGTCAAATGTGCAAGGTCTTCAGACCACGGCGACATTCGATCCACTTAAAGACGAATTTGTGATCGATACACCTAATGATGGAGCTATCAAATGGTGGATTGGAAATGCTGCAGTTCATGGGAAGTTTGCCACTGTTTTTGCCAGGCTTATACTTCCAACTCATGATTCCAAAGGAGTCTCGGATATGGGTGTTCACGCCTTCATTGTTCCGATAAGGGATATGAAAACACACCAGACACTCCCTGGTGTTGAAATCCAAGATTGTGGACATAAAGTGGGACTTAATGGAGTGGATAATGGTGCGTTGAGATTCCGTTCTGTGAGAATACCCCGTGATAATCTTCTCAATCGTTTTGGAGATGTGTCCCGAGATGGGACGTATACAAGTAGTTTGCCAACAATCAATAAAAGATTTGGTGCAACACTCGGTGAGCTTGTAGGTGGTCGAGTTGGCCTTGCCTATGCATCTGTTGGCGTCCTTAAAATCTCTGCAACGATTGCCATTCGTTATTCTCTTCTAAGACAACAATTCGGGCCTCCAAAGCAACCTGAGGTCAGTATTCTCGATTACCAGTCTCAACAACACAAGCTCATGCCGATGTTAGCCTCCACCTATGCATACCATTTTGCAACTGTATACCTTGTGGAGAAATATTCAGAGATGAAGAAGACTCACGATGAGCAATTGGTTGCTGATGTCCATGCACTCTCTGCTGGGCTCAAATCTTATGTGACGTCTTACACCGCCAAGGCGCTCTCGGTCTGCAGAGAAGCCTGTGGAGGTCATGGTTACGCAGCTGTTAACCGATTTGGAAGCTTGAGAAATGATCATGACATTTTCCAAACATTTGAAGGAGACAACACTGTACTTCTGCAACAGGTGGCTGCTGATTTATTGAAGCGTTATAAAGAAAAGTTCCAAGGCGGGACATTGACAGTTACATGGAGCTACTTGAGAGAATCAATGAACACTTATTTGTCTCAGCCAAATCCCGTTACAGCGCGTTGGGAAGGTGAAGATCATCTAAGAGATCCTAAATTCCAACTAGATGCTTTCCGGTATCGAACATCGCGATTGCTACAAAATGTGGCAGCGAGATTGCAGAAGCATTCAAAGACTCTTGGTGGTTTCGGGGCATGGAACAGATGCTTGAATCATCTTTTAACGCTTGCAGAATCTCACATTGAAACAGTCATTCTTGCCAAGTTCATCGAAGCTGTTAAAAACTGCCCGGACCCAAGTGCAAAAGCTGCTCTGAAACTAGCATGTGATCTTTACGCATTGGACCGAATCTGGAAAGATATAGGAACGTACCGTAACGTGGATTATGTGGCGCCTAACAAAGCTAAGGCGATTCATAAACTGACAGAGTATTTGAGTTTTCAAGTAAGGAATGTGGCCAAGGAACTAGTGGATGCGTTCGAGCTCCCTGATCATGTTACTCGAGCACCAATTGCTATGCAGTCCGATGCTTATTCCCAGTATACTCAAGTTGTTGGATTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001676 GO:0003674 GO:0003824 GO:0003995 GO:0003997 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006082 GO:0006629 GO:0006631 GO:0006635 GO:0008150 GO:0008152 GO:0009056 GO:0009062 GO:0009987 GO:0016042 GO:0016054 GO:0016491 GO:0016627 GO:0016634 GO:0019395 GO:0019752 GO:0030258 GO:0032787 GO:0033539 GO:0034440 GO:0036094 GO:0042579 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046395 GO:0048037 GO:0050660 GO:0050662 GO:0055114 GO:0071704 GO:0072329 GO:0097159 GO:1901265 GO:1901363 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00071 ko00592 ko01040 ko01100 ko01110 ko01212 ko03320 ko04024 ko04146 map00071 map00592 map01040 map01100 map01110 map01212 map03320 map04024 map04146

Pfam Domains

Protein Families

ACOX Acyl-CoA_dh_1 Acyl-CoA_dh_M

Protein Analysis

692

Amino Acids

77.48

Weight (kDa)

8.48

Isoelectric Point (pI)

38.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Acyl-CoA_dh_M	PF02770	182 - 298	2.4e-13	Acyl-CoA dehydrogenase, middle domain
Acyl-CoA_dh_1	PF00441	332 - 489	1.2e-09	Acyl-CoA dehydrogenase, C-terminal domain
ACOX_C_alpha1	PF22924	334 - 489	8.3e-50	Acyl-CoA oxidase, C-alpha1 domain
ACOX	PF01756	535 - 679	1.4e-25	Acyl-CoA oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012504)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G65110 AT5G65110
fragaria_vesca	FvH4_1g21250
malus_domestica	MD01G1026400.v1.1 MD15G1327100.v1.1
prunus_persica	Prupe.6G181800_v2.0.a1
pyrus_communis	pycom01g05460 pycom395g00040
rosa_chinensis	RchiOBHm_Chr2g0115091
rosa_laevigata	RLG00000018156
rosa_multiflora	Rmu_sc0002784.1_g000002
rosa_roxburghii	Rroxscaffold_2G00130560
rosa_rugosa	Rorug02G0193300 Rorug02G0193400
rosa_samantha	Rh2AG251800 Rh2BG261400 Rh2CG256300 Rh2DG259900
rosa_wichuraiana	Rw2G019640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1479
AatII	GACGTC	1 cut(s)	1310
AccB1I	GGYRCC	1 cut(s)	1906
AccI	GTMKAC	3 cut(s)	953, 1209, 2057
AccII	CGCG	3 cut(s)	10, 1576, 1645
AciI	CCGC	5 cut(s)	10, 59, 67, 1317, 1497
AclWI	GGATC	5 cut(s)	64, 77, 368, 605, 1598
AcoI	YGGCCR	1 cut(s)	1971
AcsI	RAATTY	3 cut(s)	231, 626, 1610
AcuI	CTGAAG	1 cut(s)	575
AcyI	GRCGYC	5 cut(s)	107, 269, 1047, 1307, 1907
AdeI	CACNNNGTG	1 cut(s)	1001
AfaI	GTAC	2 cut(s)	1440, 1886
AfiI	CCNNNNNNNGG	3 cut(s)	650, 945, 1894
AflIII	ACRYGT	1 cut(s)	143
AgeI	ACCGGT	1 cut(s)	539
AgsI	TTSAA	9 cut(s)	247, 449, 824, 1424, 1471, 1686, 1726, 1760, 1958
AhlI	ACTAGT	1 cut(s)	1981
AjiI	CACGTC	1 cut(s)	144
AjnI	CCWGG	2 cut(s)	713, 814
AjuI	GAANNNNNNNTTGG	2 cut(s)	721, 753
Alw21I	GWGCWC	2 cut(s)	2001, 2023
Alw26I	GTCTC	7 cut(s)	134, 461, 495, 754, 1152, 1422, 1557
AlwI	GGATC	5 cut(s)	64, 77, 368, 605, 1598
AlwNI	CAGNNNCTG	1 cut(s)	459
Ama87I	CYCGRG	2 cut(s)	939, 2016
AoxI	GGCC	4 cut(s)	350, 1024, 1106, 1971
ApeKI	GCWGC	5 cut(s)	680, 1367, 1457, 1664, 1823
ApoI	RAATTY	3 cut(s)	231, 626, 1610
ArsI	GACNNNNNNTTYG	4 cut(s)	494, 526, 1930, 1962
AsiGI	ACCGGT	1 cut(s)	539
Asp700I	GAANNNNTTC	2 cut(s)	233, 386
AspLEI	GCGC	3 cut(s)	1327, 1576, 1909
AspS9I	GGNCC	3 cut(s)	1106, 1807, 1858
AsuC2I	CCSGG	1 cut(s)	1805
AsuHPI	GGTGA	2 cut(s)	1013, 1598
AvaI	CYCGRG	2 cut(s)	939, 2016
AvaII	GGWCC	2 cut(s)	1807, 1858
AxyI	CCTNAGG	1 cut(s)	1122
BalI	TGGCCA	1 cut(s)	1973
BamHI	GGATCC	1 cut(s)	69
BanI	GGYRCC	1 cut(s)	1906
BanII	GRGCYC	2 cut(s)	1293, 2001
BbsI	GAAGAC	2 cut(s)	581, 1247
Bbv12I	GWGCWC	2 cut(s)	2001, 2023
BbvI	GCAGC	5 cut(s)	667, 1379, 1444, 1676, 1810
BccI	CCATC	5 cut(s)	41, 433, 509, 644, 938
BceAI	ACGGC	5 cut(s)	94, 100, 193, 337, 615
BciT130I	CCWGG	2 cut(s)	715, 816
BclI	TGATCA	4 cut(s)	292, 474, 1399, 2005
BcnI	CCSGG	1 cut(s)	1805
BcoDI	GTCTC	7 cut(s)	134, 461, 495, 754, 1152, 1422, 1557
BcuI	ACTAGT	1 cut(s)	1981
BfaI	CTAG	3 cut(s)	1619, 1835, 1982
BfmI	CTRYAG	2 cut(s)	681, 1336
BfoI	RGCGCY	2 cut(s)	1328, 1910
BglII	AGATCT	1 cut(s)	279
BisI	GCNGC	7 cut(s)	11, 60, 681, 1368, 1458, 1665, 1824
BlsI	GCNGC	7 cut(s)	12, 61, 682, 1369, 1459, 1666, 1825
Bme1390I	CCNGG	3 cut(s)	715, 816, 1805
Bme18I	GGWCC	2 cut(s)	1807, 1858
BmeT110I	CYCGRG	2 cut(s)	939, 2016
BmgBI	CACGTC	1 cut(s)	144
BmgT120I	GGNCC	3 cut(s)	1106, 1807, 1858
BmiI	GGNNCC	3 cut(s)	71, 1809, 1908
BmrFI	CCNGG	3 cut(s)	715, 816, 1805
BmrI	ACTGGG	1 cut(s)	2047
BmsI	GCATC	5 cut(s)	1046, 1612, 1709, 1978, 2032
BmuI	ACTGGG	1 cut(s)	2047
BpiI	GAAGAC	2 cut(s)	581, 1247
Bpu10I	CCTNAGC	1 cut(s)	1920
BpuEI	CTTGAG	3 cut(s)	1411, 1546, 2046
BpuMI	CCSGG	1 cut(s)	1805
Bsa29I	ATCGAT	1 cut(s)	636
BsaBI	GATNNNNATC	2 cut(s)	278, 294
BsaHI	GRCGYC	5 cut(s)	107, 269, 1047, 1307, 1907
BsaJI	CCNNGG	8 cut(s)	285, 427, 568, 597, 814, 1320, 1492, 1974
BsaWI	WCCGGW	2 cut(s)	539, 1629
BsaXI	ACNNNNNCTCC	2 cut(s)	456, 486
Bsc4I	CCNNNNNNNGG	3 cut(s)	650, 945, 1894
Bse118I	RCCGGY	1 cut(s)	539
Bse1I	ACTGG	2 cut(s)	1144, 2053
Bse21I	CCTNAGG	1 cut(s)	1122
Bse8I	GATNNNNATC	2 cut(s)	278, 294
BseBI	CCWGG	2 cut(s)	715, 816
BseCI	ATCGAT	1 cut(s)	636
BseDI	CCNNGG	8 cut(s)	285, 427, 568, 597, 814, 1320, 1492, 1974
BseGI	GGATG	3 cut(s)	175, 295, 1993
BseJI	GATNNNNATC	2 cut(s)	278, 294
BseLI	CCNNNNNNNGG	3 cut(s)	650, 945, 1894
BseMII	CTCAG	3 cut(s)	369, 1113, 1568
BseNI	ACTGG	2 cut(s)	1144, 2053
BseRI	GAGGAG	1 cut(s)	50
BseXI	GCAGC	5 cut(s)	667, 1379, 1444, 1676, 1810
BseYI	CCCAGC	2 cut(s)	341, 1286
BsgI	GTGCAG	1 cut(s)	152
Bsh1236I	CGCG	3 cut(s)	10, 1576, 1645
Bsh1285I	CGRYCG	1 cut(s)	276
BshFI	GGCC	4 cut(s)	352, 1026, 1108, 1973
BshNI	GGYRCC	1 cut(s)	1906
BshTI	ACCGGT	1 cut(s)	539
BshVI	ATCGAT	1 cut(s)	636
BsiEI	CGRYCG	1 cut(s)	276
BsiHKAI	GWGCWC	2 cut(s)	2001, 2023
BsiHKCI	CYCGRG	2 cut(s)	939, 2016
BsiSI	CCGG	3 cut(s)	540, 1630, 1805
BslFI	GGGAC	6 cut(s)	409, 499, 864, 922, 961, 1513
BslI	CCNNNNNNNGG	3 cut(s)	650, 945, 1894
BsmAI	GTCTC	7 cut(s)	134, 461, 495, 754, 1152, 1422, 1557
BsmBI	CGTCTC	1 cut(s)	134
BsmFI	GGGAC	6 cut(s)	409, 499, 864, 922, 961, 1513
BsmI	GAATGC	1 cut(s)	1681
BsnI	GGCC	4 cut(s)	352, 1026, 1108, 1973
BsoBI	CYCGRG	2 cut(s)	939, 2016
Bsp1286I	GDGCHC	3 cut(s)	1293, 2001, 2023
Bsp19I	CCATGG	1 cut(s)	568
Bsp68I	TCGCGA	1 cut(s)	1645
BspACI	CCGC	5 cut(s)	10, 59, 67, 1317, 1497
BspANI	GGCC	4 cut(s)	352, 1026, 1108, 1973
BspCNI	CTCAG	3 cut(s)	370, 1114, 1567
BspDI	ATCGAT	1 cut(s)	636
BspFNI	CGCG	3 cut(s)	10, 1576, 1645
BspHI	TCATGA	2 cut(s)	733, 1402
BspLI	GGNNCC	3 cut(s)	71, 1809, 1908
BspMAI	CTGCAG	2 cut(s)	685, 1340
BspPI	GGATC	5 cut(s)	64, 77, 368, 605, 1598
BspT107I	GGYRCC	1 cut(s)	1906
BsrFI	RCCGGY	1 cut(s)	539
BsrI	ACTGG	2 cut(s)	1144, 2053
BssAI	RCCGGY	1 cut(s)	539
BssECI	CCNNGG	8 cut(s)	285, 427, 568, 597, 814, 1320, 1492, 1974
BssNAI	GTATAC	3 cut(s)	954, 1210, 2058
BssNI	GRCGYC	5 cut(s)	107, 269, 1047, 1307, 1907
BssT1I	CCWWGG	6 cut(s)	285, 427, 568, 1320, 1492, 1974
Bst1107I	GTATAC	3 cut(s)	954, 1210, 2058
Bst2UI	CCWGG	2 cut(s)	715, 816
Bst4CI	ACNGT	8 cut(s)	126, 455, 706, 1207, 1438, 1510, 1765, 1889
Bst6I	CTCTTC	1 cut(s)	1092
BstACI	GRCGYC	5 cut(s)	107, 269, 1047, 1307, 1907
BstAPI	GCANNNNNTGC	4 cut(s)	1070, 1283, 1823, 2027
BstC8I	GCNNGC	1 cut(s)	1743
BstDEI	CTNAG	7 cut(s)	378, 489, 1091, 1122, 1554, 1598, 1920
BstDSI	CCRYGG	2 cut(s)	568, 597
BstF5I	GGATG	3 cut(s)	175, 295, 1993
BstFNI	CGCG	3 cut(s)	10, 1576, 1645
BstH2I	RGCGCY	2 cut(s)	1328, 1910
BstHHI	GCGC	3 cut(s)	1327, 1576, 1909
BstMAI	GTCTC	7 cut(s)	134, 461, 495, 754, 1152, 1422, 1557
BstMCI	CGRYCG	1 cut(s)	276
BstMWI	GCNNNNNNNGC	6 cut(s)	325, 1070, 1114, 1283, 1823, 2027
BstNI	CCWGG	2 cut(s)	715, 816
BstNSI	RCATGY	1 cut(s)	1842
BstSCI	CCNGG	3 cut(s)	713, 814, 1803
BstSFI	CTRYAG	2 cut(s)	681, 1336
BstUI	CGCG	3 cut(s)	10, 1576, 1645
BstV1I	GCAGC	5 cut(s)	667, 1379, 1444, 1676, 1810
BstV2I	GAAGAC	2 cut(s)	581, 1247
BstX2I	RGATCY	3 cut(s)	69, 279, 1603
BstXI	CCANNNNNNTGG	1 cut(s)	836
BstYI	RGATCY	3 cut(s)	69, 279, 1603
BstZ17I	GTATAC	3 cut(s)	954, 1210, 2058
Bsu15I	ATCGAT	1 cut(s)	636
Bsu36I	CCTNAGG	1 cut(s)	1122
BsuRI	GGCC	4 cut(s)	352, 1026, 1108, 1973
BsuTUI	ATCGAT	1 cut(s)	636
BtgI	CCRYGG	2 cut(s)	568, 597
BtgZI	GCGATG	1 cut(s)	1626
BtrI	CACGTC	1 cut(s)	144
BtsCI	GGATG	3 cut(s)	175, 295, 1993
BtsIMutI	CAGTG	2 cut(s)	702, 1434
BtuMI	TCGCGA	1 cut(s)	1645
Cac8I	GCNNGC	1 cut(s)	1743
CaiI	CAGNNNCTG	1 cut(s)	459
CciI	TCATGA	2 cut(s)	733, 1402
CfoI	GCGC	3 cut(s)	1327, 1576, 1909
Cfr10I	RCCGGY	1 cut(s)	539
Cfr13I	GGNCC	3 cut(s)	1106, 1807, 1858
ClaI	ATCGAT	1 cut(s)	636
CseI	GACGC	3 cut(s)	115, 277, 1036
Csp6I	GTAC	2 cut(s)	1439, 1885
CspAI	ACCGGT	1 cut(s)	539
CspCI	CAANNNNNGTGG	2 cut(s)	691, 726
CviQI	GTAC	2 cut(s)	1439, 1885
DdeI	CTNAG	7 cut(s)	378, 489, 1091, 1122, 1554, 1598, 1920
DinI	GGCGCC	1 cut(s)	1908
DraIII	CACNNNGTG	1 cut(s)	1001
EaeI	YGGCCR	1 cut(s)	1971
Eam1104I	CTCTTC	1 cut(s)	1092
EarI	CTCTTC	1 cut(s)	1092
EciI	GGCGGA	1 cut(s)	82
Ecl136II	GAGCTC	1 cut(s)	1999
Eco130I	CCWWGG	6 cut(s)	285, 427, 568, 1320, 1492, 1974
Eco24I	GRGCYC	2 cut(s)	1293, 2001
Eco47I	GGWCC	2 cut(s)	1807, 1858
Eco53kI	GAGCTC	1 cut(s)	1999
Eco57I	CTGAAG	1 cut(s)	575
Eco81I	CCTNAGG	1 cut(s)	1122
Eco88I	CYCGRG	2 cut(s)	939, 2016
EcoICRI	GAGCTC	1 cut(s)	1999
EcoRII	CCWGG	2 cut(s)	713, 814
EcoT14I	CCWWGG	6 cut(s)	285, 427, 568, 1320, 1492, 1974
EcoT22I	ATGCAT	2 cut(s)	1039, 1192
EcoT38I	GRGCYC	2 cut(s)	1293, 2001
EgeI	GGCGCC	1 cut(s)	1908
EheI	GGCGCC	1 cut(s)	1908
ErhI	CCWWGG	6 cut(s)	285, 427, 568, 1320, 1492, 1974
Esp3I	CGTCTC	1 cut(s)	134
FalI	AAGNNNNNCTT	2 cut(s)	837, 869
FaqI	GGGAC	6 cut(s)	409, 499, 864, 922, 961, 1513
FauI	CCCGC	1 cut(s)	1490
FbaI	TGATCA	4 cut(s)	292, 474, 1399, 2005
FblI	GTMKAC	3 cut(s)	953, 1209, 2057
Fnu4HI	GCNGC	7 cut(s)	11, 60, 681, 1368, 1458, 1665, 1824
FokI	GGATG	3 cut(s)	182, 302, 2000
FriOI	GRGCYC	2 cut(s)	1293, 2001
Fsp4HI	GCNGC	7 cut(s)	11, 60, 681, 1368, 1458, 1665, 1824
FspBI	CTAG	3 cut(s)	1619, 1835, 1982
GlaI	GCGC	3 cut(s)	1326, 1575, 1908
GluI	GCNGC	7 cut(s)	11, 60, 681, 1368, 1458, 1665, 1824
GsaI	CCCAGC	2 cut(s)	345, 1290
HaeII	RGCGCY	2 cut(s)	1328, 1910
HaeIII	GGCC	4 cut(s)	352, 1026, 1108, 1973
HapII	CCGG	3 cut(s)	540, 1630, 1805
HgaI	GACGC	3 cut(s)	115, 277, 1036
HhaI	GCGC	3 cut(s)	1327, 1576, 1909
Hin1I	GRCGYC	5 cut(s)	107, 269, 1047, 1307, 1907
Hin6I	GCGC	3 cut(s)	1325, 1574, 1907
HinP1I	GCGC	3 cut(s)	1325, 1574, 1907
HincII	GTYRAC	2 cut(s)	175, 1375
HindII	GTYRAC	2 cut(s)	175, 1375
HindIII	AAGCTT	2 cut(s)	183, 1387
HpaI	GTTAAC	1 cut(s)	1375
HpaII	CCGG	3 cut(s)	540, 1630, 1805
HphI	GGTGA	2 cut(s)	1013, 1598
Hpy166II	GTNNAC	7 cut(s)	175, 766, 839, 954, 1210, 1375, 2058
Hpy188I	TCNGA	8 cut(s)	27, 46, 594, 754, 783, 1231, 1830, 2041
Hpy8I	GTNNAC	7 cut(s)	175, 766, 839, 954, 1210, 1375, 2058
Hpy99I	CGWCG	2 cut(s)	115, 121
HpyAV	CCTTC	3 cut(s)	781, 1418, 1577
HpyCH4III	ACNGT	8 cut(s)	126, 455, 706, 1207, 1438, 1510, 1765, 1889
HpyCH4IV	ACGT	5 cut(s)	143, 950, 1307, 1883, 1893
HpyF10VI	GCNNNNNNNGC	6 cut(s)	325, 1070, 1114, 1283, 1823, 2027
HpyF3I	CTNAG	7 cut(s)	378, 489, 1091, 1122, 1554, 1598, 1920
HpySE526I	ACGT	5 cut(s)	143, 950, 1307, 1883, 1893
Hsp92I	GRCGYC	5 cut(s)	107, 269, 1047, 1307, 1907
HspAI	GCGC	3 cut(s)	1325, 1574, 1907
KasI	GGCGCC	1 cut(s)	1906
Ksp22I	TGATCA	4 cut(s)	292, 474, 1399, 2005
KspAI	GTTAAC	1 cut(s)	1375
LmnI	GCTCC	3 cut(s)	653, 1518, 2004
Lsp1109I	GCAGC	5 cut(s)	667, 1379, 1444, 1676, 1810
LweI	GCATC	5 cut(s)	1046, 1612, 1709, 1978, 2032
MaeI	CTAG	3 cut(s)	1619, 1835, 1982
MaeII	ACGT	5 cut(s)	143, 950, 1307, 1883, 1893
MaeIII	GTNAC	7 cut(s)	120, 1303, 1361, 1510, 1567, 1889, 2011
MboII	GAAGA	8 cut(s)	31, 172, 581, 905, 1079, 1249, 1252, 1601
MfeI	CAATTG	2 cut(s)	1256, 2025
MflI	RGATCY	3 cut(s)	69, 279, 1603
MhlI	GDGCHC	3 cut(s)	1293, 2001, 2023
MlsI	TGGCCA	1 cut(s)	1973
MluNI	TGGCCA	1 cut(s)	1973
Mly113I	GGCGCC	1 cut(s)	1907
MlyI	GAGTC	3 cut(s)	756, 1237, 1684
MmeI	TCCRAC	5 cut(s)	97, 388, 752, 1639, 2050
Mox20I	TGGCCA	1 cut(s)	1973
Mph1103I	ATGCAT	2 cut(s)	1039, 1192
MroXI	GAANNNNTTC	2 cut(s)	233, 386
MscI	TGGCCA	1 cut(s)	1973
MseI	TTAA	7 cut(s)	435, 618, 855, 1053, 1374, 1736, 1794
MslI	CAYNNNNRTG	1 cut(s)	1169
Msp20I	TGGCCA	1 cut(s)	1973
MspA1I	CMGCKG	1 cut(s)	1370
MspI	CCGG	3 cut(s)	540, 1630, 1805
MspR9I	CCNGG	3 cut(s)	715, 816, 1805
MunI	CAATTG	2 cut(s)	1256, 2025
Mva1269I	GAATGC	1 cut(s)	1681
MvaI	CCWGG	2 cut(s)	715, 816
MvnI	CGCG	3 cut(s)	10, 1576, 1645
MwoI	GCNNNNNNNGC	6 cut(s)	325, 1070, 1114, 1283, 1823, 2027
NarI	GGCGCC	1 cut(s)	1907
NciI	CCSGG	1 cut(s)	1805
NcoI	CCATGG	1 cut(s)	568
NlaIV	GGNNCC	3 cut(s)	71, 1809, 1908
NmuCI	GTSAC	1 cut(s)	1303
NruI	TCGCGA	1 cut(s)	1645
NsiI	ATGCAT	2 cut(s)	1039, 1192
NspI	RCATGY	1 cut(s)	1842
PaeR7I	CTCGAG	1 cut(s)	2016
PagI	TCATGA	2 cut(s)	733, 1402
PcsI	WCGNNNNNNNCGW	4 cut(s)	113, 149, 155, 1642
PctI	GAATGC	1 cut(s)	1681
PdmI	GAANNNNTTC	2 cut(s)	233, 386
PflFI	GACNNNGTC	1 cut(s)	109
PinAI	ACCGGT	1 cut(s)	539
PkrI	GCNGC	7 cut(s)	12, 61, 682, 1369, 1459, 1666, 1825
Ple19I	CGATCG	1 cut(s)	276
PleI	GAGTC	3 cut(s)	755, 1237, 1684
PluTI	GGCGCC	1 cut(s)	1910
PpsI	GAGTC	3 cut(s)	755, 1237, 1684
PsiI	TTATAA	1 cut(s)	1479
Psp124BI	GAGCTC	1 cut(s)	2001
Psp6I	CCWGG	2 cut(s)	713, 814
PspFI	CCCAGC	2 cut(s)	341, 1286
PspGI	CCWGG	2 cut(s)	713, 814
PspN4I	GGNNCC	3 cut(s)	71, 1809, 1908
PspPI	GGNCC	3 cut(s)	1106, 1807, 1858
PspXI	VCTCGAGB	1 cut(s)	2016
PstI	CTGCAG	2 cut(s)	685, 1340
PstNI	CAGNNNCTG	1 cut(s)	459
PsuI	RGATCY	3 cut(s)	69, 279, 1603
PsyI	GACNNNGTC	1 cut(s)	109
PvuI	CGATCG	1 cut(s)	276
PvuII	CAGCTG	1 cut(s)	1370
RruI	TCGCGA	1 cut(s)	1645
RsaI	GTAC	2 cut(s)	1440, 1886
RsaNI	GTAC	2 cut(s)	1439, 1885
RseI	CAYNNNNRTG	1 cut(s)	1169
SacI	GAGCTC	1 cut(s)	2001
SaqAI	TTAA	7 cut(s)	435, 618, 855, 1053, 1374, 1736, 1794
SatI	GCNGC	7 cut(s)	11, 60, 681, 1368, 1458, 1665, 1824
Sau96I	GGNCC	3 cut(s)	1106, 1807, 1858
SchI	GAGTC	3 cut(s)	756, 1237, 1684
ScrFI	CCNGG	3 cut(s)	715, 816, 1805
SduI	GDGCHC	3 cut(s)	1293, 2001, 2023
SfaNI	GCATC	5 cut(s)	1046, 1612, 1709, 1978, 2032
SfcI	CTRYAG	2 cut(s)	681, 1336
SfoI	GGCGCC	1 cut(s)	1908
Sfr274I	CTCGAG	1 cut(s)	2016
SinI	GGWCC	2 cut(s)	1807, 1858
SlaI	CTCGAG	1 cut(s)	2016
SmiMI	CAYNNNNRTG	1 cut(s)	1169
SmlI	CTYRAG	4 cut(s)	1390, 1525, 2016, 2061
SmoI	CTYRAG	4 cut(s)	1390, 1525, 2016, 2061
SpeI	ACTAGT	1 cut(s)	1981
SsiI	CCGC	5 cut(s)	10, 59, 67, 1317, 1497
SspDI	GGCGCC	1 cut(s)	1906
SspI	AATATT	1 cut(s)	1226
SspMI	CTAG	3 cut(s)	1619, 1835, 1982
SstI	GAGCTC	1 cut(s)	2001
StyD4I	CCNGG	3 cut(s)	713, 814, 1803
StyI	CCWWGG	6 cut(s)	285, 427, 568, 1320, 1492, 1974
TaaI	ACNGT	8 cut(s)	126, 455, 706, 1207, 1438, 1510, 1765, 1889
TaiI	ACGT	5 cut(s)	146, 953, 1310, 1886, 1896
TaqII	GACCGA	2 cut(s)	1321, 1875
TatI	WGTACW	1 cut(s)	1438
TauI	GCSGC	2 cut(s)	13, 62
Tru1I	TTAA	7 cut(s)	435, 618, 855, 1053, 1374, 1736, 1794
Tru9I	TTAA	7 cut(s)	435, 618, 855, 1053, 1374, 1736, 1794
TscAI	CASTG	2 cut(s)	709, 1441
TseFI	GTSAC	1 cut(s)	1303
TseI	GCWGC	5 cut(s)	680, 1367, 1457, 1664, 1823
Tsp45I	GTSAC	1 cut(s)	1303
TspDTI	ATGAA	8 cut(s)	326, 677, 763, 809, 1250, 1553, 1771, 1919
TspGWI	ACGGA	3 cut(s)	47, 152, 875
TspRI	CASTG	2 cut(s)	709, 1441
Tth111I	GACNNNGTC	1 cut(s)	109
VpaK11BI	GGWCC	2 cut(s)	1807, 1858
XapI	RAATTY	3 cut(s)	231, 626, 1610
XceI	RCATGY	1 cut(s)	1842
XcmI	CCANNNNNNNNNTGG	2 cut(s)	812, 1981
XhoI	CTCGAG	1 cut(s)	2016
XmiI	GTMKAC	3 cut(s)	953, 1209, 2057
XmnI	GAANNNNTTC	2 cut(s)	233, 386
XspI	CTAG	3 cut(s)	1619, 1835, 1982
ZraI	GACGTC	1 cut(s)	1308
Zsp2I	ATGCAT	2 cut(s)	1039, 1192

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.