Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0010146

Physical Location & Seq

Genomic Coordinates Reverse (-)

26450964 .. 26453199

Gene Structure 2236 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G66190.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1083 bp

ATGGCTGCTGCTATAAGTGCTGCAGTCTCTTTACCTTCCTCCAAGTCATCCTCTCTCCTCACCAAAATCTCCTCTGTATCCCCTCAAAGGATTTTCCTCAAGAAGAGCACAGTGTGTTACAGAAGAGTTGTGTCAGTGAAGGCTCAGGTGACAACAGATACTACCGAGGCACCACCAGTTAAAGTAGTCAAGGAGTCTAAGAAACAGGAAGAAGGGATTGTTGTCAACAAATTCAAACCTAAGAACCCTTACACTGGTCGCTGCCTTTTGAACACCAAGATCACCGGTGATGACGCTCCCGGTGAGACTTGGCACATTGTCTTCACCACCGAAGGTGAGGTTCCGTATAGAGAAGGACAATCGATAGGAGTGATTCCAGAGGGAATAGACAAGAACGGGAAGCCGCACAAGCTCAGGCTTTACTCTATCGCGAGTAGTGCCATTGGTGACTTTGGAGACTCCAAGACCGTTTCTCTCTGTGTCAAGAGACTAGTTTACACAAATGATGGCGGAGAGATTGTTAAGGGGGTCTGCTCCAACTTCTTGTGTGACTTGAAGCCGGGTGATGAAGCTAAGATCACTGGACCTGTTGGCAAGGAAATGCTTATGCCAAAAGACCCCAATGCCACCATCATCATGCTTGGAACAGGAACTGGAATAGCTCCATTCAGATCATTTTTGTGGAAAATGTTCTTTGAGGAGCACGAGGACTACAAGTTCAATGGTTTGGCGTGGCTTTTCTTGGGTGTACCCACAAGCAGCTCACTGCTATACAAGGAGGAGTTTGAGAAGATGAAGGAGAAGAACCCAGACAACTTCAGGCTGGACTTTGCGGTGAGCAGAGAGCAGACGAACGAGAAGGGAGAGAAAATGTACATTCAGACAAGAATGGCAGAGTATGCAGAAGAGCTGTGGGAGTTGCTGAAGAAAGACAACACCTTTGTTTACATGTGTGGTCTTAAGGGTATGGAGAAGGGTATCGATGACATTATGGTCTCGCTTGCTGCTAAAGATGGGATCGATTGGTTGGAGTACAAGAAGCAATTGAAGAGGAGTGAACAGTGGAATGTTGAAGTCTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0006091 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008187 GO:0008266 GO:0009055 GO:0009507 GO:0009526 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009719 GO:0009725 GO:0009735 GO:0009767 GO:0009814 GO:0009817 GO:0009941 GO:0009987 GO:0010033 GO:0015979 GO:0016020 GO:0016491 GO:0019684 GO:0019904 GO:0022900 GO:0031967 GO:0031975 GO:0031976 GO:0031977 GO:0031984 GO:0032991 GO:0034357 GO:0042221 GO:0042651 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0045156 GO:0045157 GO:0048046 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0055035 GO:0055114 GO:0097159 GO:0098542 GO:0098796 GO:0098807 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00195 ko01100 map00195 map01100

Pfam Domains

Protein Families

NAD_binding_1

Protein Analysis

360

Amino Acids

40.33

Weight (kDa)

8.32

Isoelectric Point (pI)

37.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAD_binding_1	PF00175	213 - 327	1.1e-27	Oxidoreductase NAD-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010146)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20020 AT1G20020 AT1G20020 AT5G66190 AT5G66190
fragaria_vesca	FvH4_1g11730
malus_domestica	MD02G1130800.v1.1 MD15G1244500.v1.1
prunus_persica	Prupe.7G169200_v2.0.a1
pyrus_communis	pycom02g10250 pycom15g21530
rosa_chinensis	RchiOBHm_Chr2g0099331
rosa_laevigata	RLG00000016872
rosa_multiflora	Rmu_sc0009774.1_g000008
rosa_roxburghii	Rroxscaffold_2G00143200
rosa_rugosa	Rorug02G0078700
rosa_samantha	Rh2AG128200 Rh2BG131100 Rh2CG132300 Rh2DG132700
rosa_wichuraiana	Rw2G009900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	992
AccB1I	GGYRCC	1 cut(s)	169
AccI	GTMKAC	1 cut(s)	1077
AccII	CGCG	1 cut(s)	431
AciI	CCGC	3 cut(s)	404, 510, 833
AclWI	GGATC	1 cut(s)	1025
AcsI	RAATTY	1 cut(s)	230
AcuI	CTGAAG	2 cut(s)	802, 944
AdeI	CACNNNGTG	1 cut(s)	114
AfaI	GTAC	3 cut(s)	750, 875, 1034
AfiI	CCNNNNNNNGG	2 cut(s)	87, 254
AflII	CTTAAG	1 cut(s)	959
AflIII	ACRYGT	1 cut(s)	948
AgeI	ACCGGT	1 cut(s)	284
AgsI	TTSAA	6 cut(s)	235, 271, 556, 721, 1048, 1073
AhlI	ACTAGT	1 cut(s)	490
AloI	GAACNNNNNNTCC	2 cut(s)	701, 733
AluBI	AGCT	5 cut(s)	412, 572, 662, 762, 910
AluI	AGCT	5 cut(s)	412, 572, 662, 762, 910
Alw21I	GWGCWC	2 cut(s)	110, 705
Alw26I	GTCTC	5 cut(s)	31, 299, 450, 481, 1000
AlwI	GGATC	1 cut(s)	1025
AlwNI	CAGNNNCTG	1 cut(s)	653
ApeKI	GCWGC	6 cut(s)	5, 8, 20, 261, 759, 1004
ApoI	RAATTY	1 cut(s)	230
ArsI	GACNNNNNNTTYG	2 cut(s)	923, 955
AsiGI	ACCGGT	1 cut(s)	284
Asp700I	GAANNNNTTC	1 cut(s)	689
AspS9I	GGNCC	1 cut(s)	584
AsuC2I	CCSGG	2 cut(s)	300, 561
AvaII	GGWCC	1 cut(s)	584
BanI	GGYRCC	1 cut(s)	169
BauI	CACGAG	1 cut(s)	704
BbsI	GAAGAC	1 cut(s)	313
Bbv12I	GWGCWC	2 cut(s)	110, 705
BbvI	GCAGC	4 cut(s)	7, 248, 771, 991
BccI	CCATC	3 cut(s)	500, 638, 1007
BciVI	GTATCC	1 cut(s)	88
BcnI	CCSGG	2 cut(s)	300, 561
BcoDI	GTCTC	5 cut(s)	31, 299, 450, 481, 1000
BcuI	ACTAGT	1 cut(s)	490
BfaI	CTAG	1 cut(s)	491
BfmI	CTRYAG	1 cut(s)	21
BfrI	CTTAAG	1 cut(s)	959
BfuI	GTATCC	1 cut(s)	88
BisI	GCNGC	7 cut(s)	6, 9, 21, 262, 404, 760, 1005
BlsI	GCNGC	7 cut(s)	7, 10, 22, 263, 405, 761, 1006
Bme1390I	CCNGG	2 cut(s)	300, 561
Bme18I	GGWCC	1 cut(s)	584
BmgT120I	GGNCC	1 cut(s)	584
BmiI	GGNNCC	2 cut(s)	171, 342
BmrFI	CCNGG	2 cut(s)	300, 561
BpiI	GAAGAC	1 cut(s)	313
Bpu10I	CCTNAGC	2 cut(s)	144, 413
BpuEI	CTTGAG	1 cut(s)	83
BpuMI	CCSGG	2 cut(s)	300, 561
Bsa29I	ATCGAT	3 cut(s)	362, 981, 1020
BsaI	GGTCTC	1 cut(s)	1000
BsaJI	CCNNGG	1 cut(s)	165
BsaWI	WCCGGW	1 cut(s)	284
BsaXI	ACNNNNNCTCC	2 cut(s)	504, 534
Bsc4I	CCNNNNNNNGG	2 cut(s)	87, 254
Bse118I	RCCGGY	1 cut(s)	284
Bse1I	ACTGG	4 cut(s)	176, 259, 586, 658
BseCI	ATCGAT	3 cut(s)	362, 981, 1020
BseDI	CCNNGG	1 cut(s)	165
BseGI	GGATG	1 cut(s)	47
BseLI	CCNNNNNNNGG	2 cut(s)	87, 254
BseMII	CTCAG	2 cut(s)	158, 427
BseNI	ACTGG	4 cut(s)	176, 259, 586, 658
BseRI	GAGGAG	5 cut(s)	47, 61, 713, 794, 1066
BseXI	GCAGC	4 cut(s)	7, 248, 771, 991
Bsh1236I	CGCG	1 cut(s)	431
BshNI	GGYRCC	1 cut(s)	169
BshTI	ACCGGT	1 cut(s)	284
BshVI	ATCGAT	3 cut(s)	362, 981, 1020
BsiHKAI	GWGCWC	2 cut(s)	110, 705
BsiSI	CCGG	3 cut(s)	285, 300, 560
BslI	CCNNNNNNNGG	2 cut(s)	87, 254
BsmAI	GTCTC	5 cut(s)	31, 299, 450, 481, 1000
Bso31I	GGTCTC	1 cut(s)	1000
Bsp1286I	GDGCHC	2 cut(s)	110, 705
Bsp1407I	TGTACA	1 cut(s)	873
Bsp143I	GATC	4 cut(s)	279, 576, 671, 1017
Bsp68I	TCGCGA	1 cut(s)	431
BspACI	CCGC	3 cut(s)	404, 510, 833
BspCNI	CTCAG	2 cut(s)	157, 426
BspDI	ATCGAT	3 cut(s)	362, 981, 1020
BspFNI	CGCG	1 cut(s)	431
BspLI	GGNNCC	2 cut(s)	171, 342
BspMAI	CTGCAG	1 cut(s)	25
BspPI	GGATC	1 cut(s)	1025
BspQI	GCTCTTC	2 cut(s)	98, 900
BspT107I	GGYRCC	1 cut(s)	169
BspTI	CTTAAG	1 cut(s)	959
BspTNI	GGTCTC	1 cut(s)	1000
BsrFI	RCCGGY	1 cut(s)	284
BsrGI	TGTACA	1 cut(s)	873
BsrI	ACTGG	4 cut(s)	176, 259, 586, 658
BssAI	RCCGGY	1 cut(s)	284
BssECI	CCNNGG	1 cut(s)	165
BssMI	GATC	4 cut(s)	279, 576, 671, 1017
BssSI	CACGAG	1 cut(s)	704
Bst2BI	CACGAG	1 cut(s)	704
Bst4CI	ACNGT	3 cut(s)	112, 469, 1062
Bst6I	CTCTTC	4 cut(s)	98, 118, 900, 1043
BstAFI	CTTAAG	1 cut(s)	959
BstAPI	GCANNNNNTGC	1 cut(s)	899
BstAUI	TGTACA	1 cut(s)	873
BstC8I	GCNNGC	1 cut(s)	1002
BstDEI	CTNAG	5 cut(s)	144, 198, 240, 413, 573
BstF5I	GGATG	1 cut(s)	47
BstFNI	CGCG	1 cut(s)	431
BstKTI	GATC	4 cut(s)	282, 579, 674, 1020
BstMAI	GTCTC	5 cut(s)	31, 299, 450, 481, 1000
BstMBI	GATC	4 cut(s)	279, 576, 671, 1017
BstMWI	GCNNNNNNNGC	4 cut(s)	17, 409, 437, 899
BstNSI	RCATGY	1 cut(s)	952
BstSCI	CCNGG	2 cut(s)	298, 559
BstSFI	CTRYAG	1 cut(s)	21
BstUI	CGCG	1 cut(s)	431
BstV1I	GCAGC	4 cut(s)	7, 248, 771, 991
BstV2I	GAAGAC	1 cut(s)	313
Bsu15I	ATCGAT	3 cut(s)	362, 981, 1020
BsuI	GTATCC	1 cut(s)	88
BsuTUI	ATCGAT	3 cut(s)	362, 981, 1020
BtsCI	GGATG	1 cut(s)	47
BtsI	GCAGTG	1 cut(s)	764
BtsIMutI	CAGTG	6 cut(s)	117, 141, 252, 579, 764, 1067
BtuMI	TCGCGA	1 cut(s)	431
Cac8I	GCNNGC	1 cut(s)	1002
CaiI	CAGNNNCTG	1 cut(s)	653
Cfr10I	RCCGGY	1 cut(s)	284
Cfr13I	GGNCC	1 cut(s)	584
ClaI	ATCGAT	3 cut(s)	362, 981, 1020
CseI	GACGC	1 cut(s)	302
Csp6I	GTAC	3 cut(s)	749, 874, 1033
CspAI	ACCGGT	1 cut(s)	284
CviAII	CATG	2 cut(s)	637, 949
CviQI	GTAC	3 cut(s)	749, 874, 1033
DdeI	CTNAG	5 cut(s)	144, 198, 240, 413, 573
DpnI	GATC	4 cut(s)	281, 578, 673, 1019
DpnII	GATC	4 cut(s)	279, 576, 671, 1017
DraIII	CACNNNGTG	1 cut(s)	114
DrdI	GACNNNNNNGTC	1 cut(s)	992
DseDI	GACNNNNNNGTC	1 cut(s)	992
Eam1104I	CTCTTC	4 cut(s)	98, 118, 900, 1043
EarI	CTCTTC	4 cut(s)	98, 118, 900, 1043
EciI	GGCGGA	1 cut(s)	525
Eco31I	GGTCTC	1 cut(s)	1000
Eco47I	GGWCC	1 cut(s)	584
Eco57I	CTGAAG	2 cut(s)	802, 944
FaeI	CATG	2 cut(s)	640, 952
FaiI	YATR	9 cut(s)	14, 348, 608, 638, 772, 900, 950, 968, 992
FatI	CATG	2 cut(s)	636, 948
FblI	GTMKAC	1 cut(s)	1077
Fnu4HI	GCNGC	7 cut(s)	6, 9, 21, 262, 404, 760, 1005
FokI	GGATG	1 cut(s)	34
Fsp4HI	GCNGC	7 cut(s)	6, 9, 21, 262, 404, 760, 1005
FspBI	CTAG	1 cut(s)	491
GluI	GCNGC	7 cut(s)	6, 9, 21, 262, 404, 760, 1005
HapII	CCGG	3 cut(s)	285, 300, 560
HgaI	GACGC	1 cut(s)	302
Hin1II	CATG	2 cut(s)	640, 952
HincII	GTYRAC	1 cut(s)	226
HindII	GTYRAC	1 cut(s)	226
HinfI	GANTC	3 cut(s)	194, 373, 458
HpaII	CCGG	3 cut(s)	285, 300, 560
Hpy166II	GTNNAC	6 cut(s)	226, 496, 749, 946, 1058, 1078
Hpy188I	TCNGA	2 cut(s)	671, 882
Hpy188III	TCNNGA	4 cut(s)	100, 377, 430, 484
Hpy8I	GTNNAC	6 cut(s)	226, 496, 749, 946, 1058, 1078
HpyAV	CCTTC	8 cut(s)	45, 133, 206, 326, 347, 790, 853, 967
HpyCH4III	ACNGT	3 cut(s)	112, 469, 1062
HpyCH4V	TGCA	2 cut(s)	23, 902
HpyF10VI	GCNNNNNNNGC	4 cut(s)	17, 409, 437, 899
HpyF3I	CTNAG	5 cut(s)	144, 198, 240, 413, 573
Hsp92II	CATG	2 cut(s)	640, 952
Kzo9I	GATC	4 cut(s)	279, 576, 671, 1017
LguI	GCTCTTC	2 cut(s)	98, 900
LmnI	GCTCC	4 cut(s)	301, 539, 667, 700
Lsp1109I	GCAGC	4 cut(s)	7, 248, 771, 991
MaeI	CTAG	1 cut(s)	491
MaeIII	GTNAC	4 cut(s)	116, 148, 446, 548
MalI	GATC	4 cut(s)	281, 578, 673, 1019
MboI	GATC	4 cut(s)	279, 576, 671, 1017
MboII	GAAGA	9 cut(s)	115, 135, 221, 313, 802, 814, 917, 937, 1060
MfeI	CAATTG	1 cut(s)	1043
MhlI	GDGCHC	2 cut(s)	110, 705
MluCI	AATT	2 cut(s)	230, 1043
MlyI	GAGTC	2 cut(s)	203, 452
MmeI	TCCRAC	2 cut(s)	561, 1008
MroXI	GAANNNNTTC	1 cut(s)	689
MseI	TTAA	3 cut(s)	180, 522, 960
MslI	CAYNNNNRTG	2 cut(s)	635, 679
MspCI	CTTAAG	1 cut(s)	959
MspI	CCGG	3 cut(s)	285, 300, 560
MspR9I	CCNGG	2 cut(s)	300, 561
MunI	CAATTG	1 cut(s)	1043
MvnI	CGCG	1 cut(s)	431
MwoI	GCNNNNNNNGC	4 cut(s)	17, 409, 437, 899
NciI	CCSGG	2 cut(s)	300, 561
NdeII	GATC	4 cut(s)	279, 576, 671, 1017
NlaIII	CATG	2 cut(s)	640, 952
NlaIV	GGNNCC	2 cut(s)	171, 342
NmuCI	GTSAC	3 cut(s)	148, 446, 548
NruI	TCGCGA	1 cut(s)	431
NspI	RCATGY	1 cut(s)	952
PciI	ACATGT	1 cut(s)	948
PciSI	GCTCTTC	2 cut(s)	98, 900
PdmI	GAANNNNTTC	1 cut(s)	689
PfeI	GAWTC	1 cut(s)	373
PinAI	ACCGGT	1 cut(s)	284
PkrI	GCNGC	7 cut(s)	7, 10, 22, 263, 405, 761, 1006
PleI	GAGTC	2 cut(s)	202, 452
PpsI	GAGTC	2 cut(s)	202, 452
PscI	ACATGT	1 cut(s)	948
PspN4I	GGNNCC	2 cut(s)	171, 342
PspPI	GGNCC	1 cut(s)	584
PstI	CTGCAG	1 cut(s)	25
PstNI	CAGNNNCTG	1 cut(s)	653
RruI	TCGCGA	1 cut(s)	431
RsaI	GTAC	3 cut(s)	750, 875, 1034
RsaNI	GTAC	3 cut(s)	749, 874, 1033
RseI	CAYNNNNRTG	2 cut(s)	635, 679
SapI	GCTCTTC	2 cut(s)	98, 900
SaqAI	TTAA	3 cut(s)	180, 522, 960
SatI	GCNGC	7 cut(s)	6, 9, 21, 262, 404, 760, 1005
Sau3AI	GATC	4 cut(s)	279, 576, 671, 1017
Sau96I	GGNCC	1 cut(s)	584
SchI	GAGTC	2 cut(s)	203, 452
ScrFI	CCNGG	2 cut(s)	300, 561
SduI	GDGCHC	2 cut(s)	110, 705
SfcI	CTRYAG	1 cut(s)	21
SgrAI	CRCCGGYG	1 cut(s)	284
SinI	GGWCC	1 cut(s)	584
SmiMI	CAYNNNNRTG	2 cut(s)	635, 679
SmlI	CTYRAG	2 cut(s)	98, 959
SmoI	CTYRAG	2 cut(s)	98, 959
SpeI	ACTAGT	1 cut(s)	490
Sse9I	AATT	2 cut(s)	230, 1043
SsiI	CCGC	3 cut(s)	404, 510, 833
SspMI	CTAG	1 cut(s)	491
StyD4I	CCNGG	2 cut(s)	298, 559
TaaI	ACNGT	3 cut(s)	112, 469, 1062
TaqI	TCGA	3 cut(s)	362, 981, 1020
TasI	AATT	2 cut(s)	230, 1043
TatI	WGTACW	2 cut(s)	873, 1032
TauI	GCSGC	1 cut(s)	406
TfiI	GAWTC	1 cut(s)	373
Tru1I	TTAA	3 cut(s)	180, 522, 960
Tru9I	TTAA	3 cut(s)	180, 522, 960
TscAI	CASTG	6 cut(s)	117, 141, 259, 586, 771, 1067
TseFI	GTSAC	3 cut(s)	148, 446, 548
TseI	GCWGC	6 cut(s)	5, 8, 20, 261, 759, 1004
Tsp45I	GTSAC	3 cut(s)	148, 446, 548
TspDTI	ATGAA	2 cut(s)	582, 809
TspGWI	ACGGA	1 cut(s)	333
TspRI	CASTG	6 cut(s)	117, 141, 259, 586, 771, 1067
Vha464I	CTTAAG	1 cut(s)	959
VpaK11BI	GGWCC	1 cut(s)	584
XapI	RAATTY	1 cut(s)	230
XceI	RCATGY	1 cut(s)	952
XmiI	GTMKAC	1 cut(s)	1077
XmnI	GAANNNNTTC	1 cut(s)	689
XspI	CTAG	1 cut(s)	491

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.