pycom02g10250

Ferredoxin-NADP reductase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
7082358 .. 7085295
2938 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g10250.4

Sequence Viewer

Length: 1413 bp
ATGGTATGTGACCAAAATCACAATCATCTTTTGACAGGGGTCTCAGCCTATACAACAAAACTTGGGTGTTTTTTCGTTAAAAATAAACAGTATCCGGATGTTTTGTTAAACCTCCCAAAAATCAAAGGTTGGGCGAGAGTCATACATTACACAAAAGACTTATCCTCTCATCTGCCACTGCATTGGCCTTCAAATCTCTACCACCAATCTTTAATCCAAAACCCACCAAAAAGTTCTCCCATTTCTTCAACAAATTTTCTCATCAAGCATCAAACTTTTGCTTCTCTTTTATTTCTTCTCCCTCTTCTGCTTCCTCAGCATTCTAACTCCACAACCATGGCTGCAGCTGTGACCGCTGCTGTCTCCTTCCCCTCCTCCAAGTCCTCCTCCCTCCCCACCAGGACCTCCTTAATCTCACCTGACAGAATCACCCTCAAGAAGGTTCCTTTGTACAACAGCAATGCTGGTGGGAGAGTGGTGTCCATCAGAGCCCAGGTGACCACCACCGAGACTGCGCCACCTGCCAAGGTTGTGAAGGAATCCAAGAAGCAAGATGAAGGGGTGGTTGTCAACAAGTACAAGCCCAAAAATCCGTACATTGCCAGAGTCCTCCTCAACACTAAGATCACTGGTGATGATGCGCCTGGTGAGACCTGGCACATGGTCTTCAGCACAGAGGGAGAGGTGCCCTACAGAGAAGGGCAGTCCATTGGAGTTATTCCCGAAGGTGTCGACAAAAATGGTAAGCCTCACAAGCTGAGGTTGTACTCAATTGCCAGCAGCGCCCTCGGTGACTTTGGAGACTCCAAGACTGTTTCTCTGTGTGTGAAACGTCTCGTGTACACCAATGACGCAGGCGAAATTGTTAAAGGAGTGTGTGACTTGAAGCCCGGAAGTGAAGTGACGATCACCGGACCAGTTGGAAAAGAAATGCTTATGCCAAAAGACCCTAATGCAACCGTCATCATGCTTGCAACTGGAACCGGAATTGCTCCTTTTAGAGCATTCTTGTGGAAAATGTTCTTCGAGAAGCACGAAGACTACAAGTTCAATGGTTTGGCATGGCTCTTCTTGGGTGTTCCTACAAGTAGCTCACTGCTCTACAAGGAGGAATTCGAGAAGATGAAGGAGAAGGCCCCCGAAAACTTCAGGCTTGACTTCGCCGTCAGCAGAGAGCAAACCAACGAGAAGGGTGAGAAGATGTACATCCAAACCAGAATGGCTCAGTATGCAGAAGAGCTATGGGAGTTGCTCAAGAAAGACAACACCTACGTCTACATGTGTGGTCTCAAGGGAATGGAGAAGGGTATCGATGATATCATGGTCTCGTTGGCTGCCAAAGACGGCATTGACTGGATAGACTACAAGAAGCAGTTGAAGAAATCAGAGCAATGGAATGTGGAAGTCTACTAA

Protein Analysis

471

Amino Acids

52.58

Weight (kDa)

9.1

Isoelectric Point (pI)

34.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0010146)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 529
AasI GACNNNNNNGTC 1 cut(s) 1163
Acc36I ACCTGC 1 cut(s) 529
AccB1I GGYRCC 1 cut(s) 685
AccI GTMKAC 3 cut(s) 732, 1275, 1407
AccIII TCCGGA 1 cut(s) 94
AciI CCGC 1 cut(s) 354
AcsI RAATTY 2 cut(s) 253, 1112
AcuI CTGAAG 2 cut(s) 652, 1132
AfaI GTAC 6 cut(s) 452, 578, 596, 767, 842, 1205
AfiI CCNNNNNNNGG 1 cut(s) 439
AflIII ACRYGT 1 cut(s) 1278
AgsI TTSAA 5 cut(s) 192, 249, 886, 1051, 1378
AjnI CCWGG 4 cut(s) 398, 492, 643, 653
AluBI AGCT 4 cut(s) 347, 757, 1092, 1240
AluI AGCT 4 cut(s) 347, 757, 1092, 1240
Alw26I GTCTC 8 cut(s) 46, 367, 503, 644, 795, 839, 1292, 1330
Aor13HI TCCGGA 1 cut(s) 94
AoxI GGCC 2 cut(s) 185, 1134
ApeKI GCWGC 5 cut(s) 341, 344, 356, 780, 1334
ApoI RAATTY 2 cut(s) 253, 1112
Asp700I GAANNNNTTC 1 cut(s) 1019
AspLEI GCGC 3 cut(s) 517, 643, 785
AspS9I GGNCC 3 cut(s) 402, 914, 1135
AsuC2I CCSGG 1 cut(s) 891
AsuHPI GGTGA 8 cut(s) 408, 421, 508, 644, 659, 803, 901, 1205
AvaII GGWCC 2 cut(s) 402, 914
BaeGI GKGCMC 1 cut(s) 690
BanI GGYRCC 1 cut(s) 685
BanII GRGCYC 1 cut(s) 493
BauI CACGAG 1 cut(s) 836
BbsI GAAGAC 2 cut(s) 658, 1044
BbvCI CCTCAGC 2 cut(s) 315, 758
BbvI GCAGC 5 cut(s) 328, 343, 356, 792, 1321
BccI CCATC 1 cut(s) 491
BceAI ACGGC 2 cut(s) 1148, 1360
BcgI CGANNNNNNTGC 2 cut(s) 769, 803
BciT130I CCWGG 4 cut(s) 400, 494, 645, 655
BciVI GTATCC 1 cut(s) 102
BcnI CCSGG 1 cut(s) 891
BcoDI GTCTC 8 cut(s) 46, 367, 503, 644, 795, 839, 1292, 1330
BfmI CTRYAG 2 cut(s) 342, 691
BfoI RGCGCY 1 cut(s) 786
BfuAI ACCTGC 1 cut(s) 529
BfuI GTATCC 1 cut(s) 102
BisI GCNGC 5 cut(s) 342, 345, 357, 781, 1335
BlsI GCNGC 5 cut(s) 343, 346, 358, 782, 1336
Bme1390I CCNGG 5 cut(s) 400, 494, 645, 655, 891
Bme18I GGWCC 2 cut(s) 402, 914
BmgT120I GGNCC 3 cut(s) 402, 914, 1135
BmiI GGNNCC 4 cut(s) 444, 687, 982, 1137
BmrFI CCNGG 5 cut(s) 400, 494, 645, 655, 891
BmsI GCATC 2 cut(s) 277, 628
BoxI GACNNNNGTC 1 cut(s) 38
BpiI GAAGAC 2 cut(s) 658, 1044
BplI GAGNNNNNCTC 2 cut(s) 597, 629
Bpu10I CCTNAGC 2 cut(s) 315, 758
BpuEI CTTGAG 3 cut(s) 419, 1238, 1274
BpuMI CCSGG 1 cut(s) 891
Bsa29I ATCGAT 1 cut(s) 1311
BsaBI GATNNNNATC 1 cut(s) 1205
BsaI GGTCTC 4 cut(s) 46, 644, 1292, 1330
BsaJI CCNNGG 4 cut(s) 336, 492, 525, 787
BsaWI WCCGGW 3 cut(s) 94, 911, 983
Bsc4I CCNNNNNNNGG 1 cut(s) 439
Bse1I ACTGG 4 cut(s) 634, 917, 982, 1358
Bse3DI GCAATG 3 cut(s) 466, 597, 1397
Bse8I GATNNNNATC 1 cut(s) 1205
BseAI TCCGGA 1 cut(s) 94
BseBI CCWGG 4 cut(s) 400, 494, 645, 655
BseCI ATCGAT 1 cut(s) 1311
BseDI CCNNGG 4 cut(s) 336, 492, 525, 787
BseGI GGATG 2 cut(s) 103, 1206
BseJI GATNNNNATC 1 cut(s) 1205
BseLI CCNNNNNNNGG 1 cut(s) 439
BseMI GCAATG 3 cut(s) 466, 597, 1397
BseMII CTCAG 4 cut(s) 57, 329, 749, 1238
BseNI ACTGG 4 cut(s) 634, 917, 982, 1358
BseRI GAGGAG 3 cut(s) 364, 376, 602
BseSI GKGCMC 1 cut(s) 690
BseXI GCAGC 5 cut(s) 328, 343, 356, 792, 1321
BshFI GGCC 2 cut(s) 187, 1136
BshNI GGYRCC 1 cut(s) 685
BshVI ATCGAT 1 cut(s) 1311
BsiSI CCGG 4 cut(s) 95, 891, 912, 984
BslI CCNNNNNNNGG 1 cut(s) 439
BsmAI GTCTC 8 cut(s) 46, 367, 503, 644, 795, 839, 1292, 1330
BsmBI CGTCTC 1 cut(s) 839
BsmI GAATGC 2 cut(s) 319, 1004
BsnI GGCC 2 cut(s) 187, 1136
Bso31I GGTCTC 4 cut(s) 46, 644, 1292, 1330
Bsp1286I GDGCHC 2 cut(s) 493, 690
Bsp13I TCCGGA 1 cut(s) 94
Bsp1407I TGTACA 3 cut(s) 450, 840, 1203
Bsp143I GATC 2 cut(s) 624, 906
Bsp19I CCATGG 1 cut(s) 336
BspACI CCGC 1 cut(s) 354
BspANI GGCC 2 cut(s) 187, 1136
BspCNI CTCAG 4 cut(s) 56, 328, 750, 1237
BspDI ATCGAT 1 cut(s) 1311
BspEI TCCGGA 1 cut(s) 94
BspLI GGNNCC 4 cut(s) 444, 687, 982, 1137
BspMAI CTGCAG 1 cut(s) 346
BspMI ACCTGC 1 cut(s) 529
BspQI GCTCTTC 2 cut(s) 1073, 1230
BspT107I GGYRCC 1 cut(s) 685
BspTNI GGTCTC 4 cut(s) 46, 644, 1292, 1330
BsrDI GCAATG 3 cut(s) 466, 597, 1397
BsrGI TGTACA 3 cut(s) 450, 840, 1203
BsrI ACTGG 4 cut(s) 634, 917, 982, 1358
BssECI CCNNGG 4 cut(s) 336, 492, 525, 787
BssMI GATC 2 cut(s) 624, 906
BssSI CACGAG 1 cut(s) 836
BssT1I CCWWGG 2 cut(s) 336, 525
Bst2BI CACGAG 1 cut(s) 836
Bst2UI CCWGG 4 cut(s) 400, 494, 645, 655
Bst4CI ACNGT 3 cut(s) 90, 814, 961
Bst6I CTCTTC 3 cut(s) 309, 1073, 1230
BstAUI TGTACA 3 cut(s) 450, 840, 1203
BstC8I GCNNGC 3 cut(s) 778, 856, 972
BstDEI CTNAG 5 cut(s) 43, 315, 621, 758, 1224
BstDSI CCRYGG 1 cut(s) 336
BstEII GGTNACC 1 cut(s) 496
BstENI CCTNNNNNAGG 1 cut(s) 437
BstF5I GGATG 2 cut(s) 103, 1206
BstH2I RGCGCY 1 cut(s) 786
BstHHI GCGC 3 cut(s) 517, 643, 785
BstKTI GATC 2 cut(s) 627, 909
BstMAI GTCTC 8 cut(s) 46, 367, 503, 644, 795, 839, 1292, 1330
BstMBI GATC 2 cut(s) 624, 906
BstMWI GCNNNNNNNGC 6 cut(s) 316, 353, 521, 754, 782, 1229
BstNI CCWGG 4 cut(s) 400, 494, 645, 655
BstNSI RCATGY 1 cut(s) 1282
BstPAI GACNNNNGTC 1 cut(s) 38
BstPI GGTNACC 1 cut(s) 496
BstSCI CCNGG 5 cut(s) 398, 492, 643, 653, 889
BstSFI CTRYAG 2 cut(s) 342, 691
BstSLI GKGCMC 1 cut(s) 690
BstV1I GCAGC 5 cut(s) 328, 343, 356, 792, 1321
BstV2I GAAGAC 2 cut(s) 658, 1044
BstXI CCANNNNNNTGG 2 cut(s) 183, 337
Bsu15I ATCGAT 1 cut(s) 1311
BsuI GTATCC 1 cut(s) 102
BsuRI GGCC 2 cut(s) 187, 1136
BsuTUI ATCGAT 1 cut(s) 1311
BtgI CCRYGG 1 cut(s) 336
BtsCI GGATG 2 cut(s) 103, 1206
BtsI GCAGTG 2 cut(s) 176, 1094
BtsIMutI CAGTG 3 cut(s) 176, 627, 1094
BveI ACCTGC 1 cut(s) 529
Cac8I GCNNGC 3 cut(s) 778, 856, 972
CfoI GCGC 3 cut(s) 517, 643, 785
Cfr13I GGNCC 3 cut(s) 402, 914, 1135
ClaI ATCGAT 1 cut(s) 1311
CseI GACGC 1 cut(s) 860
Csp6I GTAC 6 cut(s) 451, 577, 595, 766, 841, 1204
CspCI CAANNNNNGTGG 2 cut(s) 448, 483
CviAII CATG 6 cut(s) 337, 661, 967, 1062, 1279, 1321
CviQI GTAC 6 cut(s) 451, 577, 595, 766, 841, 1204
DdeI CTNAG 5 cut(s) 43, 315, 621, 758, 1224
DpnI GATC 2 cut(s) 626, 908
DpnII GATC 2 cut(s) 624, 906
DrdI GACNNNNNNGTC 1 cut(s) 1163
DseDI GACNNNNNNGTC 1 cut(s) 1163
Eam1104I CTCTTC 3 cut(s) 309, 1073, 1230
EarI CTCTTC 3 cut(s) 309, 1073, 1230
Eco130I CCWWGG 2 cut(s) 336, 525
Eco24I GRGCYC 1 cut(s) 493
Eco31I GGTCTC 4 cut(s) 46, 644, 1292, 1330
Eco32I GATATC 1 cut(s) 1318
Eco47I GGWCC 2 cut(s) 402, 914
Eco57I CTGAAG 2 cut(s) 652, 1132
Eco91I GGTNACC 1 cut(s) 496
EcoNI CCTNNNNNAGG 1 cut(s) 437
EcoO109I RGGNCCY 2 cut(s) 402, 1135
EcoO65I GGTNACC 1 cut(s) 496
EcoRI GAATTC 1 cut(s) 1112
EcoRII CCWGG 4 cut(s) 398, 492, 643, 653
EcoRV GATATC 1 cut(s) 1318
EcoT14I CCWWGG 2 cut(s) 336, 525
EcoT38I GRGCYC 1 cut(s) 493
ErhI CCWWGG 2 cut(s) 336, 525
Esp3I CGTCTC 1 cut(s) 839
FaeI CATG 6 cut(s) 340, 664, 970, 1065, 1282, 1324
FalI AAGNNNNNCTT 2 cut(s) 918, 950
FatI CATG 6 cut(s) 336, 660, 966, 1061, 1278, 1320
FblI GTMKAC 3 cut(s) 732, 1275, 1407
Fnu4HI GCNGC 5 cut(s) 342, 345, 357, 781, 1335
FokI GGATG 2 cut(s) 110, 1193
FriOI GRGCYC 1 cut(s) 493
Fsp4HI GCNGC 5 cut(s) 342, 345, 357, 781, 1335
GlaI GCGC 3 cut(s) 516, 642, 784
GluI GCNGC 5 cut(s) 342, 345, 357, 781, 1335
HaeII RGCGCY 1 cut(s) 786
HaeIII GGCC 2 cut(s) 187, 1136
HapII CCGG 4 cut(s) 95, 891, 912, 984
HgaI GACGC 1 cut(s) 860
HhaI GCGC 3 cut(s) 517, 643, 785
Hin1II CATG 6 cut(s) 340, 664, 970, 1065, 1282, 1324
Hin6I GCGC 3 cut(s) 515, 641, 783
HinP1I GCGC 3 cut(s) 515, 641, 783
HincII GTYRAC 2 cut(s) 571, 733
HindII GTYRAC 2 cut(s) 571, 733
HinfI GANTC 5 cut(s) 138, 426, 539, 606, 803
HpaII CCGG 4 cut(s) 95, 891, 912, 984
HphI GGTGA 8 cut(s) 408, 421, 508, 644, 659, 803, 901, 1205
Hpy166II GTNNAC 6 cut(s) 571, 733, 841, 843, 1276, 1408
Hpy188I TCNGA 2 cut(s) 488, 1387
Hpy188III TCNNGA 6 cut(s) 95, 436, 722, 1027, 1117, 1255
Hpy8I GTNNAC 6 cut(s) 571, 733, 841, 843, 1276, 1408
HpyCH4III ACNGT 3 cut(s) 90, 814, 961
HpyCH4IV ACGT 2 cut(s) 832, 1272
HpyCH4V TGCA 5 cut(s) 181, 344, 956, 974, 1232
HpyF10VI GCNNNNNNNGC 6 cut(s) 316, 353, 521, 754, 782, 1229
HpyF3I CTNAG 5 cut(s) 43, 315, 621, 758, 1224
HpySE526I ACGT 2 cut(s) 832, 1272
Hsp92II CATG 6 cut(s) 340, 664, 970, 1065, 1282, 1324
HspAI GCGC 3 cut(s) 515, 641, 783
Kpn2I TCCGGA 1 cut(s) 94
Kzo9I GATC 2 cut(s) 624, 906
LguI GCTCTTC 2 cut(s) 1073, 1230
LmnI GCTCC 1 cut(s) 997
Lsp1109I GCAGC 5 cut(s) 328, 343, 356, 792, 1321
LweI GCATC 2 cut(s) 277, 628
MaeII ACGT 2 cut(s) 832, 1272
MaeIII GTNAC 6 cut(s) 8, 349, 496, 791, 878, 901
MalI GATC 2 cut(s) 626, 908
MboI GATC 2 cut(s) 624, 906
MfeI CAATTG 1 cut(s) 771
MhlI GDGCHC 2 cut(s) 493, 690
MluCI AATT 5 cut(s) 253, 771, 861, 987, 1112
MlyI GAGTC 3 cut(s) 147, 615, 797
MmeI TCCRAC 1 cut(s) 901
MroI TCCGGA 1 cut(s) 94
MroXI GAANNNNTTC 1 cut(s) 1019
MseI TTAA 5 cut(s) 78, 107, 212, 410, 867
MslI CAYNNNNRTG 2 cut(s) 335, 1009
MspA1I CMGCKG 2 cut(s) 347, 356
MspI CCGG 4 cut(s) 95, 891, 912, 984
MspR9I CCNGG 5 cut(s) 400, 494, 645, 655, 891
MunI CAATTG 1 cut(s) 771
Mva1269I GAATGC 2 cut(s) 319, 1004
MvaI CCWGG 4 cut(s) 400, 494, 645, 655
MwoI GCNNNNNNNGC 6 cut(s) 316, 353, 521, 754, 782, 1229
NciI CCSGG 1 cut(s) 891
NcoI CCATGG 1 cut(s) 336
NdeII GATC 2 cut(s) 624, 906
NlaIII CATG 6 cut(s) 340, 664, 970, 1065, 1282, 1324
NlaIV GGNNCC 4 cut(s) 444, 687, 982, 1137
NmuCI GTSAC 6 cut(s) 8, 349, 496, 791, 878, 901
NspI RCATGY 1 cut(s) 1282
PaqCI CACCTGC 1 cut(s) 529
PciI ACATGT 1 cut(s) 1278
PciSI GCTCTTC 2 cut(s) 1073, 1230
PcsI WCGNNNNNNNCGW 1 cut(s) 1032
PctI GAATGC 2 cut(s) 319, 1004
PdmI GAANNNNTTC 1 cut(s) 1019
PfeI GAWTC 2 cut(s) 426, 539
PkrI GCNGC 5 cut(s) 343, 346, 358, 782, 1336
PleI GAGTC 3 cut(s) 146, 614, 797
PpsI GAGTC 3 cut(s) 146, 614, 797
PpuMI RGGWCCY 1 cut(s) 402
PscI ACATGT 1 cut(s) 1278
PshAI GACNNNNGTC 1 cut(s) 38
Psp5II RGGWCCY 1 cut(s) 402
Psp6I CCWGG 4 cut(s) 398, 492, 643, 653
PspEI GGTNACC 1 cut(s) 496
PspGI CCWGG 4 cut(s) 398, 492, 643, 653
PspN4I GGNNCC 4 cut(s) 444, 687, 982, 1137
PspPI GGNCC 3 cut(s) 402, 914, 1135
PspPPI RGGWCCY 1 cut(s) 402
PstI CTGCAG 1 cut(s) 346
PvuII CAGCTG 1 cut(s) 347
RsaI GTAC 6 cut(s) 452, 578, 596, 767, 842, 1205
RsaNI GTAC 6 cut(s) 451, 577, 595, 766, 841, 1204
RseI CAYNNNNRTG 2 cut(s) 335, 1009
SalI GTCGAC 1 cut(s) 731
SapI GCTCTTC 2 cut(s) 1073, 1230
SaqAI TTAA 5 cut(s) 78, 107, 212, 410, 867
SatI GCNGC 5 cut(s) 342, 345, 357, 781, 1335
Sau3AI GATC 2 cut(s) 624, 906
Sau96I GGNCC 3 cut(s) 402, 914, 1135
SchI GAGTC 3 cut(s) 147, 615, 797
ScrFI CCNGG 5 cut(s) 400, 494, 645, 655, 891
SduI GDGCHC 2 cut(s) 493, 690
SfaNI GCATC 2 cut(s) 277, 628
SfcI CTRYAG 2 cut(s) 342, 691
SinI GGWCC 2 cut(s) 402, 914
SmiMI CAYNNNNRTG 2 cut(s) 335, 1009
SmlI CTYRAG 3 cut(s) 434, 1253, 1289
SmoI CTYRAG 3 cut(s) 434, 1253, 1289
Sse9I AATT 5 cut(s) 253, 771, 861, 987, 1112
SsiI CCGC 1 cut(s) 354
StyD4I CCNGG 5 cut(s) 398, 492, 643, 653, 889
StyI CCWWGG 2 cut(s) 336, 525
TaaI ACNGT 3 cut(s) 90, 814, 961
TaiI ACGT 2 cut(s) 835, 1275
TaqI TCGA 4 cut(s) 732, 1026, 1116, 1311
TasI AATT 5 cut(s) 253, 771, 861, 987, 1112
TatI WGTACW 5 cut(s) 450, 576, 765, 840, 1203
TfiI GAWTC 2 cut(s) 426, 539
Tru1I TTAA 5 cut(s) 78, 107, 212, 410, 867
Tru9I TTAA 5 cut(s) 78, 107, 212, 410, 867
TscAI CASTG 3 cut(s) 183, 634, 1101
TseFI GTSAC 6 cut(s) 8, 349, 496, 791, 878, 901
TseI GCWGC 5 cut(s) 341, 344, 356, 780, 1334
Tsp45I GTSAC 6 cut(s) 8, 349, 496, 791, 878, 901
TspDTI ATGAA 2 cut(s) 570, 1139
TspGWI ACGGA 1 cut(s) 582
TspRI CASTG 3 cut(s) 183, 634, 1101
VpaK11BI GGWCC 2 cut(s) 402, 914
XagI CCTNNNNNAGG 1 cut(s) 437
XapI RAATTY 2 cut(s) 253, 1112
XceI RCATGY 1 cut(s) 1282
XmiI GTMKAC 3 cut(s) 732, 1275, 1407
XmnI GAANNNNTTC 1 cut(s) 1019
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.