AT5G67290

oxidoreductase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0009595
Physical Location & Seq
Reverse (-)
26848127 .. 26850040
1914 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G67290.1

Sequence Viewer

Length: 1221 bp
ATGGCGGTGATCTCATCGTTATTATTCCCTCCGGTGTTAACCCGACGAACAATCACGATCTGCTCCAACTCATCGAAATCAATGGCGGCTAAAAAACAAATCGGTGAAGAAACCTCGAAGCGGGTCTTTGTATGCGGCGGTGGAGTAATCGGCGTCTGTACTGCTTATTTCCTCGCCAAGAAAGGAATCGCCGTCACTCTCGTCGAGAAATCAGCCGTCGCGTGCGCTGCTTCCGGTAAAGCCGGTGGATTTCTCGCTTTCGATTGGTGCGATGGAAGTCCTGTTGCGCATTTAGCACGCGCGAGCTTTAAACTCCATCGATCGCTCGCTGAGGAGCTAAACGGTGTCGAATCGTACGGATACAGAGCACTCACGACTCTTAGCGTCACCGTGACGGAATCAAAACCCGGTTCCGGCGGTTTGGGATTACCGGATTGGGTCAACGGCCCAGCTAAAAGCACATCAACGATTGGTACAACTCAAACAACAGCACAAGTGCATCCTCAACTTTTTACTCGGAAGCTTTTATCGACGGCGAGAGAGAAGTACGGTGTTGAGGTTGTGATCGGGAAATTAGAAGAGGTGAGAGTGGAATCAGGTAGAGTTAACTCTGTAGTGCTTGAAGGTGGGAGAGTTATAGACACTGACGTGGTGGTTCTGGCGATGGGTCCATGGTCGAGTAAATTTGAGCTGTTGTCTTCGATTTTTAGGGTTTATTGTACTAAAGCTCATAGCATTGTCTTGGAACCGAAGGAACCAAATGCTATAACACCTCATGCCCTGTTCTTAACTTATCGTCCTGCTCATGGTGGTGAAGCTTTGGACCCTGAAGTATACCCTCGTCCCACAGGTGAAGTGTACATATGTGGAATGTCATCACAAGAAGAGGTACCTGATGATGCTGATCAGGTCACAAGCAATCCTGAATCGATCCAGGTTCTCAAGAGAGTTGCGAAAACAGTCTCGAGCTATCTAAACGAAGAAAACGCTCTAGTGAAAGCAGAGCAAGCTTGTTTCTTGCCCAGCACAGAAGATGGAGTTCCTGTGATCGGAGAGATTCCAGGAATCAAGGGATGTTATGTAGGCACAGGGCATAGTTGTTGGGGGATTCTTAATGGTCCAGCCACTGGTGCTGCTTTGGCTGAGCTTATTGTAGACGGTGTAGCCACAAGTGTTGATCTTAGCCGGTTTAGTCCTTCCCGGTTTAGCAAACGAAGATGA

Protein Analysis

406

Amino Acids

43.11

Weight (kDa)

7.54

Isoelectric Point (pI)

38.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DAO PF01266 41 - 383 2.1e-46 FAD dependent oxidoreductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 288
Acc65I GGTACC 1 cut(s) 889
AccB1I GGYRCC 1 cut(s) 889
AccB7I CCANNNNNTGG 1 cut(s) 1127
AccI GTMKAC 2 cut(s) 834, 1155
AccII CGCG 3 cut(s) 221, 300, 302
AciI CCGC 6 cut(s) 5, 86, 121, 135, 138, 417
AclWI GGATC 1 cut(s) 925
AcsI RAATTY 1 cut(s) 683
AcuI CTGAAG 1 cut(s) 849
AcyI GRCGYC 1 cut(s) 153
AfaI GTAC 7 cut(s) 160, 356, 475, 548, 721, 860, 891
AfiI CCNNNNNNNGG 5 cut(s) 120, 413, 806, 1049, 1127
AgsI TTSAA 1 cut(s) 623
AjiI CACGTC 1 cut(s) 649
AjnI CCWGG 2 cut(s) 933, 1060
AleI CACNNNNGTG 1 cut(s) 647
Alw21I GWGCWC 1 cut(s) 370
Alw26I GTCTC 1 cut(s) 967
AlwI GGATC 1 cut(s) 925
AlwNI CAGNNNCTG 1 cut(s) 1127
Ama87I CYCGRG 1 cut(s) 964
AoxI GGCC 1 cut(s) 445
ApeKI GCWGC 2 cut(s) 227, 1133
ApoI RAATTY 1 cut(s) 683
Asp718I GGTACC 1 cut(s) 889
AspLEI GCGC 3 cut(s) 227, 289, 302
AspS9I GGNCC 4 cut(s) 446, 668, 823, 1118
AsuC2I CCSGG 2 cut(s) 408, 1201
AsuHPI GGTGA 6 cut(s) 19, 116, 379, 595, 824, 863
AvaI CYCGRG 1 cut(s) 964
AvaII GGWCC 3 cut(s) 668, 823, 1118
BanI GGYRCC 1 cut(s) 889
BbsI GAAGAC 1 cut(s) 690
Bbv12I GWGCWC 1 cut(s) 370
BbvCI CCTCAGC 1 cut(s) 330
BbvI GCAGC 2 cut(s) 214, 1120
BccI CCATC 4 cut(s) 266, 324, 658, 1028
BceAI ACGGC 4 cut(s) 176, 200, 460, 549
BciT130I CCWGG 2 cut(s) 935, 1062
BciVI GTATCC 1 cut(s) 353
BclI TGATCA 1 cut(s) 904
BcnI CCSGG 2 cut(s) 408, 1201
BcoDI GTCTC 1 cut(s) 967
BfaI CTAG 1 cut(s) 992
BfmI CTRYAG 1 cut(s) 612
BfuI GTATCC 1 cut(s) 353
BisI GCNGC 4 cut(s) 87, 136, 228, 1134
BlpI GCTNAGC 1 cut(s) 1143
BlsI GCNGC 4 cut(s) 88, 137, 229, 1135
Bme1390I CCNGG 4 cut(s) 408, 935, 1062, 1201
Bme18I GGWCC 3 cut(s) 668, 823, 1118
BmeT110I CYCGRG 1 cut(s) 964
BmgBI CACGTC 1 cut(s) 649
BmgT120I GGNCC 4 cut(s) 446, 668, 823, 1118
BmiI GGNNCC 6 cut(s) 412, 669, 747, 756, 825, 891
BmrFI CCNGG 4 cut(s) 408, 935, 1062, 1201
BmsI GCATC 2 cut(s) 508, 889
BpiI GAAGAC 1 cut(s) 690
Bpu10I CCTNAGC 1 cut(s) 330
Bpu1102I GCTNAGC 1 cut(s) 1143
BpuEI CTTGAG 1 cut(s) 926
BpuMI CCSGG 2 cut(s) 408, 1201
Bsa29I ATCGAT 2 cut(s) 319, 929
BsaBI GATNNNNATC 1 cut(s) 903
BsaHI GRCGYC 1 cut(s) 153
BsaJI CCNNGG 1 cut(s) 671
BsaWI WCCGGW 3 cut(s) 31, 233, 430
BsaXI ACNNNNNCTCC 2 cut(s) 1029, 1059
Bsc4I CCNNNNNNNGG 5 cut(s) 120, 413, 806, 1049, 1127
Bse118I RCCGGY 2 cut(s) 242, 1185
Bse1I ACTGG 1 cut(s) 1132
Bse8I GATNNNNATC 1 cut(s) 903
BseBI CCWGG 2 cut(s) 935, 1062
BseCI ATCGAT 2 cut(s) 319, 929
BseDI CCNNGG 1 cut(s) 671
BseGI GGATG 2 cut(s) 499, 1079
BseJI GATNNNNATC 1 cut(s) 903
BseLI CCNNNNNNNGG 5 cut(s) 120, 413, 806, 1049, 1127
BseMII CTCAG 2 cut(s) 321, 1134
BseNI ACTGG 1 cut(s) 1132
BseRI GAGGAG 1 cut(s) 347
BseXI GCAGC 2 cut(s) 214, 1120
BseYI CCCAGC 2 cut(s) 448, 1022
Bsh1236I CGCG 3 cut(s) 221, 300, 302
Bsh1285I CGRYCG 1 cut(s) 323
BshFI GGCC 1 cut(s) 447
BshNI GGYRCC 1 cut(s) 889
BshVI ATCGAT 2 cut(s) 319, 929
BsiEI CGRYCG 1 cut(s) 323
BsiHKAI GWGCWC 1 cut(s) 370
BsiHKCI CYCGRG 1 cut(s) 964
BsiSI CCGG 8 cut(s) 32, 234, 243, 408, 414, 431, 1186, 1201
BsiWI CGTACG 1 cut(s) 354
BslFI GGGAC 1 cut(s) 828
BslI CCNNNNNNNGG 5 cut(s) 120, 413, 806, 1049, 1127
BsmAI GTCTC 1 cut(s) 967
BsmFI GGGAC 1 cut(s) 828
BsnI GGCC 1 cut(s) 447
BsoBI CYCGRG 1 cut(s) 964
Bsp1286I GDGCHC 1 cut(s) 370
Bsp1407I TGTACA 1 cut(s) 858
Bsp143I GATC 8 cut(s) 9, 57, 320, 564, 904, 930, 1047, 1177
Bsp1720I GCTNAGC 1 cut(s) 1143
Bsp19I CCATGG 1 cut(s) 671
BspACI CCGC 6 cut(s) 5, 86, 121, 135, 138, 417
BspANI GGCC 1 cut(s) 447
BspCNI CTCAG 2 cut(s) 322, 1135
BspDI ATCGAT 2 cut(s) 319, 929
BspFNI CGCG 3 cut(s) 221, 300, 302
BspLI GGNNCC 6 cut(s) 412, 669, 747, 756, 825, 891
BspPI GGATC 1 cut(s) 925
BspT107I GGYRCC 1 cut(s) 889
BsrFI RCCGGY 2 cut(s) 242, 1185
BsrGI TGTACA 1 cut(s) 858
BsrI ACTGG 1 cut(s) 1132
BssAI RCCGGY 2 cut(s) 242, 1185
BssECI CCNNGG 1 cut(s) 671
BssMI GATC 8 cut(s) 9, 57, 320, 564, 904, 930, 1047, 1177
BssNAI GTATAC 1 cut(s) 835
BssNI GRCGYC 1 cut(s) 153
BssT1I CCWWGG 1 cut(s) 671
Bst1107I GTATAC 1 cut(s) 835
Bst2UI CCWGG 2 cut(s) 935, 1062
Bst4CI ACNGT 5 cut(s) 344, 391, 551, 961, 1160
Bst6I CTCTTC 2 cut(s) 573, 879
BstACI GRCGYC 1 cut(s) 153
BstAUI TGTACA 1 cut(s) 858
BstC8I GCNNGC 5 cut(s) 223, 298, 304, 327, 1008
BstDEI CTNAG 4 cut(s) 330, 380, 1143, 1181
BstDSI CCRYGG 1 cut(s) 671
BstF5I GGATG 2 cut(s) 499, 1079
BstFNI CGCG 3 cut(s) 221, 300, 302
BstHHI GCGC 3 cut(s) 227, 289, 302
BstKTI GATC 8 cut(s) 12, 60, 323, 567, 907, 933, 1050, 1180
BstMAI GTCTC 1 cut(s) 967
BstMBI GATC 8 cut(s) 9, 57, 320, 564, 904, 930, 1047, 1177
BstMCI CGRYCG 1 cut(s) 323
BstMWI GCNNNNNNNGC 5 cut(s) 227, 293, 1007, 1130, 1139
BstNI CCWGG 2 cut(s) 935, 1062
BstSCI CCNGG 4 cut(s) 406, 933, 1060, 1199
BstSFI CTRYAG 1 cut(s) 612
BstUI CGCG 3 cut(s) 221, 300, 302
BstV1I GCAGC 2 cut(s) 214, 1120
BstV2I GAAGAC 1 cut(s) 690
BstZ17I GTATAC 1 cut(s) 835
Bsu15I ATCGAT 2 cut(s) 319, 929
BsuI GTATCC 1 cut(s) 353
BsuRI GGCC 1 cut(s) 447
BsuTUI ATCGAT 2 cut(s) 319, 929
BtgI CCRYGG 1 cut(s) 671
BtgZI GCGATG 2 cut(s) 285, 677
BtrI CACGTC 1 cut(s) 649
BtsCI GGATG 2 cut(s) 499, 1079
BtsIMutI CAGTG 2 cut(s) 642, 1125
Cac8I GCNNGC 5 cut(s) 223, 298, 304, 327, 1008
CaiI CAGNNNCTG 1 cut(s) 1127
CfoI GCGC 3 cut(s) 227, 289, 302
Cfr10I RCCGGY 2 cut(s) 242, 1185
Cfr13I GGNCC 4 cut(s) 446, 668, 823, 1118
ClaI ATCGAT 2 cut(s) 319, 929
CseI GACGC 2 cut(s) 142, 373
Csp6I GTAC 7 cut(s) 159, 355, 474, 547, 720, 859, 890
CspCI CAANNNNNGTGG 2 cut(s) 1156, 1191
CviAII CATG 3 cut(s) 672, 776, 806
CviQI GTAC 7 cut(s) 159, 355, 474, 547, 720, 859, 890
DdeI CTNAG 4 cut(s) 330, 380, 1143, 1181
DpnI GATC 8 cut(s) 11, 59, 322, 566, 906, 932, 1049, 1179
DpnII GATC 8 cut(s) 9, 57, 320, 564, 904, 930, 1047, 1177
DraI TTTAAA 1 cut(s) 310
Eam1104I CTCTTC 2 cut(s) 573, 879
EarI CTCTTC 2 cut(s) 573, 879
Eco130I CCWWGG 1 cut(s) 671
Eco47I GGWCC 3 cut(s) 668, 823, 1118
Eco57I CTGAAG 1 cut(s) 849
Eco88I CYCGRG 1 cut(s) 964
EcoRII CCWGG 2 cut(s) 933, 1060
EcoT14I CCWWGG 1 cut(s) 671
ErhI CCWWGG 1 cut(s) 671
FaeI CATG 3 cut(s) 675, 779, 809
FalI AAGNNNNNCTT 2 cut(s) 110, 142
FaqI GGGAC 1 cut(s) 828
FatI CATG 3 cut(s) 671, 775, 805
FauI CCCGC 1 cut(s) 114
FauNDI CATATG 1 cut(s) 863
FbaI TGATCA 1 cut(s) 904
FblI GTMKAC 2 cut(s) 834, 1155
Fnu4HI GCNGC 4 cut(s) 87, 136, 228, 1134
FokI GGATG 2 cut(s) 486, 1086
Fsp4HI GCNGC 4 cut(s) 87, 136, 228, 1134
FspBI CTAG 1 cut(s) 992
FspI TGCGCA 1 cut(s) 288
GlaI GCGC 3 cut(s) 226, 288, 301
GluI GCNGC 4 cut(s) 87, 136, 228, 1134
GsaI CCCAGC 2 cut(s) 452, 1026
HaeIII GGCC 1 cut(s) 447
HapII CCGG 8 cut(s) 32, 234, 243, 408, 414, 431, 1186, 1201
HgaI GACGC 2 cut(s) 142, 373
HhaI GCGC 3 cut(s) 227, 289, 302
Hin1I GRCGYC 1 cut(s) 153
Hin1II CATG 3 cut(s) 675, 779, 809
Hin6I GCGC 3 cut(s) 225, 287, 300
HinP1I GCGC 3 cut(s) 225, 287, 300
HincII GTYRAC 3 cut(s) 39, 442, 607
HindII GTYRAC 3 cut(s) 39, 442, 607
HindIII AAGCTT 3 cut(s) 521, 816, 1008
HinfI GANTC 9 cut(s) 186, 350, 376, 398, 593, 926, 1057, 1065, 1108
HpaI GTTAAC 2 cut(s) 39, 607
HpaII CCGG 8 cut(s) 32, 234, 243, 408, 414, 431, 1186, 1201
HphI GGTGA 6 cut(s) 19, 116, 379, 595, 824, 863
Hpy166II GTNNAC 6 cut(s) 39, 442, 607, 835, 859, 1156
Hpy188I TCNGA 2 cut(s) 519, 1052
Hpy188III TCNNGA 7 cut(s) 55, 205, 373, 568, 923, 943, 964
Hpy8I GTNNAC 6 cut(s) 39, 442, 607, 835, 859, 1156
Hpy99I CGWCG 4 cut(s) 48, 206, 221, 535
HpyAV CCTTC 3 cut(s) 617, 745, 1206
HpyCH4III ACNGT 5 cut(s) 344, 391, 551, 961, 1160
HpyCH4IV ACGT 1 cut(s) 648
HpyCH4V TGCA 1 cut(s) 499
HpyF10VI GCNNNNNNNGC 5 cut(s) 227, 293, 1007, 1130, 1139
HpyF3I CTNAG 4 cut(s) 330, 380, 1143, 1181
HpySE526I ACGT 1 cut(s) 648
Hsp92I GRCGYC 1 cut(s) 153
Hsp92II CATG 3 cut(s) 675, 779, 809
HspAI GCGC 3 cut(s) 225, 287, 300
KpnI GGTACC 1 cut(s) 893
Ksp22I TGATCA 1 cut(s) 904
KspAI GTTAAC 2 cut(s) 39, 607
Kzo9I GATC 8 cut(s) 9, 57, 320, 564, 904, 930, 1047, 1177
LmnI GCTCC 2 cut(s) 68, 334
Lsp1109I GCAGC 2 cut(s) 214, 1120
LweI GCATC 2 cut(s) 508, 889
MaeI CTAG 1 cut(s) 992
MaeII ACGT 1 cut(s) 648
MaeIII GTNAC 4 cut(s) 193, 385, 391, 910
MalI GATC 8 cut(s) 11, 59, 322, 566, 906, 932, 1049, 1179
MboI GATC 8 cut(s) 9, 57, 320, 564, 904, 930, 1047, 1177
MboII GAAGA 6 cut(s) 119, 590, 690, 896, 992, 1043
MhlI GDGCHC 1 cut(s) 370
MluCI AATT 2 cut(s) 572, 683
MlyI GAGTC 1 cut(s) 370
MmeI TCCRAC 1 cut(s) 90
MseI TTAA 5 cut(s) 38, 309, 606, 788, 1113
MslI CAYNNNNRTG 2 cut(s) 647, 810
MspI CCGG 8 cut(s) 32, 234, 243, 408, 414, 431, 1186, 1201
MspR9I CCNGG 4 cut(s) 408, 935, 1062, 1201
MvaI CCWGG 2 cut(s) 935, 1062
MvnI CGCG 3 cut(s) 221, 300, 302
MwoI GCNNNNNNNGC 5 cut(s) 227, 293, 1007, 1130, 1139
NciI CCSGG 2 cut(s) 408, 1201
NcoI CCATGG 1 cut(s) 671
NdeI CATATG 1 cut(s) 863
NdeII GATC 8 cut(s) 9, 57, 320, 564, 904, 930, 1047, 1177
NlaIII CATG 3 cut(s) 675, 779, 809
NlaIV GGNNCC 6 cut(s) 412, 669, 747, 756, 825, 891
NmuCI GTSAC 4 cut(s) 193, 385, 391, 910
NsbI TGCGCA 1 cut(s) 288
OliI CACNNNNGTG 1 cut(s) 647
PaeR7I CTCGAG 1 cut(s) 964
PcsI WCGNNNNNNNCGW 1 cut(s) 267
PfeI GAWTC 8 cut(s) 186, 350, 398, 593, 926, 1057, 1065, 1108
Pfl23II CGTACG 1 cut(s) 354
PflMI CCANNNNNTGG 1 cut(s) 1127
PfoI TCCNGGA 1 cut(s) 1060
PkrI GCNGC 4 cut(s) 88, 137, 229, 1135
Ple19I CGATCG 1 cut(s) 323
PleI GAGTC 1 cut(s) 370
PpsI GAGTC 1 cut(s) 370
Psp6I CCWGG 2 cut(s) 933, 1060
PspFI CCCAGC 2 cut(s) 448, 1022
PspGI CCWGG 2 cut(s) 933, 1060
PspLI CGTACG 1 cut(s) 354
PspN4I GGNNCC 6 cut(s) 412, 669, 747, 756, 825, 891
PspPI GGNCC 4 cut(s) 446, 668, 823, 1118
PstNI CAGNNNCTG 1 cut(s) 1127
PvuI CGATCG 1 cut(s) 323
RsaI GTAC 7 cut(s) 160, 356, 475, 548, 721, 860, 891
RsaNI GTAC 7 cut(s) 159, 355, 474, 547, 720, 859, 890
RseI CAYNNNNRTG 2 cut(s) 647, 810
SaqAI TTAA 5 cut(s) 38, 309, 606, 788, 1113
SatI GCNGC 4 cut(s) 87, 136, 228, 1134
Sau3AI GATC 8 cut(s) 9, 57, 320, 564, 904, 930, 1047, 1177
Sau96I GGNCC 4 cut(s) 446, 668, 823, 1118
SchI GAGTC 1 cut(s) 370
ScrFI CCNGG 4 cut(s) 408, 935, 1062, 1201
SduI GDGCHC 1 cut(s) 370
SfaNI GCATC 2 cut(s) 508, 889
SfcI CTRYAG 1 cut(s) 612
Sfr274I CTCGAG 1 cut(s) 964
SinI GGWCC 3 cut(s) 668, 823, 1118
SlaI CTCGAG 1 cut(s) 964
SmiMI CAYNNNNRTG 2 cut(s) 647, 810
SmlI CTYRAG 2 cut(s) 941, 964
SmoI CTYRAG 2 cut(s) 941, 964
Sse9I AATT 2 cut(s) 572, 683
SsiI CCGC 6 cut(s) 5, 86, 121, 135, 138, 417
SspMI CTAG 1 cut(s) 992
StyD4I CCNGG 4 cut(s) 406, 933, 1060, 1199
StyI CCWWGG 1 cut(s) 671
TaaI ACNGT 5 cut(s) 344, 391, 551, 961, 1160
TaiI ACGT 1 cut(s) 651
TasI AATT 2 cut(s) 572, 683
TatI WGTACW 3 cut(s) 158, 719, 858
TauI GCSGC 2 cut(s) 89, 138
TfiI GAWTC 8 cut(s) 186, 350, 398, 593, 926, 1057, 1065, 1108
Tru1I TTAA 5 cut(s) 38, 309, 606, 788, 1113
Tru9I TTAA 5 cut(s) 38, 309, 606, 788, 1113
TscAI CASTG 2 cut(s) 649, 1132
TseFI GTSAC 4 cut(s) 193, 385, 391, 910
TseI GCWGC 2 cut(s) 227, 1133
Tsp45I GTSAC 4 cut(s) 193, 385, 391, 910
TspGWI ACGGA 2 cut(s) 372, 410
TspRI CASTG 2 cut(s) 649, 1132
Van91I CCANNNNNTGG 1 cut(s) 1127
VpaK11BI GGWCC 3 cut(s) 668, 823, 1118
XapI RAATTY 1 cut(s) 683
XhoI CTCGAG 1 cut(s) 964
XmiI GTMKAC 2 cut(s) 834, 1155
XspI CTAG 1 cut(s) 992
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.