Belongs to the NPH3 family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G23050 AT2G23050 AT4G37590 AT5G67440 AT5G67440 AT5G67440 |
| fragaria_vesca | FvH4_1g17440 FvH4_1g17440 FvH4_1g17440 FvH4_1g17440 FvH4_1g17440 FvH4_1g17440 FvH4_1g17440 |
| malus_domestica | MD02G1183500.v1.1 MD15G1295200.v1.1 |
| prunus_persica | Prupe.6G222500_v2.0.a1 Prupe.6G222500_v2.0.a1 Prupe.6G222500_v2.0.a1 Prupe.6G222500_v2.0.a1 Prupe.6G222500_v2.0.a1 |
| pyrus_communis | pycom02g14920 pycom15g25820 |
| rosa_chinensis | RchiOBHm_Chr2g0107651 |
| rosa_laevigata | RLG00000017605 |
| rosa_roxburghii | Rroxscaffold_2G00136090 |
| rosa_rugosa | Rorug02G0146100 Rorug02G0146100 |
| rosa_samantha | Rh2AG195900 Rh2BG208300 Rh2CG201000 Rh2DG203400 Rh6AG399700 |
| rosa_wichuraiana | Rw2G015500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 561 |
| AccBSI | CCGCTC | 1 cut(s) | 1458 |
| AccI | GTMKAC | 2 cut(s) | 1181, 1712 |
| AccII | CGCG | 1 cut(s) | 263 |
| AciI | CCGC | 3 cut(s) | 217, 690, 1458 |
| AclWI | GGATC | 5 cut(s) | 15, 28, 524, 537, 636 |
| AcsI | RAATTY | 2 cut(s) | 116, 266 |
| AcuI | CTGAAG | 2 cut(s) | 146, 492 |
| AcyI | GRCGYC | 1 cut(s) | 1706 |
| AdeI | CACNNNGTG | 1 cut(s) | 1366 |
| AfaI | GTAC | 3 cut(s) | 492, 606, 1401 |
| AfeI | AGCGCT | 1 cut(s) | 154 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1001, 1457 |
| AflIII | ACRYGT | 1 cut(s) | 1263 |
| AgsI | TTSAA | 9 cut(s) | 359, 397, 517, 764, 886, 1034, 1113, 1218, 1273 |
| AjiI | CACGTC | 1 cut(s) | 112 |
| AjnI | CCWGG | 3 cut(s) | 748, 1282, 1672 |
| AleI | CACNNNNGTG | 1 cut(s) | 1242 |
| Alw21I | GWGCWC | 4 cut(s) | 642, 994, 1360, 1475 |
| Alw26I | GTCTC | 6 cut(s) | 102, 812, 1068, 1517, 1536, 1596 |
| AlwI | GGATC | 5 cut(s) | 15, 28, 524, 537, 636 |
| Ama87I | CYCGRG | 3 cut(s) | 232, 338, 584 |
| Aor51HI | AGCGCT | 1 cut(s) | 154 |
| AoxI | GGCC | 1 cut(s) | 239 |
| ApeKI | GCWGC | 3 cut(s) | 326, 521, 734 |
| ApoI | RAATTY | 2 cut(s) | 116, 266 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 811, 843 |
| AseI | ATTAAT | 1 cut(s) | 1322 |
| AspLEI | GCGC | 3 cut(s) | 155, 263, 326 |
| AspS9I | GGNCC | 1 cut(s) | 239 |
| AsuC2I | CCSGG | 2 cut(s) | 233, 234 |
| AsuHPI | GGTGA | 3 cut(s) | 986, 1016, 1706 |
| AsuII | TTCGAA | 1 cut(s) | 903 |
| AvaI | CYCGRG | 3 cut(s) | 232, 338, 584 |
| AxyI | CCTNAGG | 1 cut(s) | 702 |
| BamHI | GGATCC | 2 cut(s) | 20, 529 |
| BanII | GRGCYC | 3 cut(s) | 642, 994, 1475 |
| BbsI | GAAGAC | 2 cut(s) | 152, 1571 |
| Bbv12I | GWGCWC | 4 cut(s) | 642, 994, 1360, 1475 |
| BbvI | GCAGC | 3 cut(s) | 313, 508, 746 |
| BccI | CCATC | 5 cut(s) | 376, 790, 1133, 1235, 1625 |
| BceAI | ACGGC | 2 cut(s) | 1349, 1693 |
| BciT130I | CCWGG | 3 cut(s) | 750, 1284, 1674 |
| BciVI | GTATCC | 1 cut(s) | 1136 |
| BclI | TGATCA | 2 cut(s) | 873, 984 |
| BcnI | CCSGG | 2 cut(s) | 233, 234 |
| BcoDI | GTCTC | 6 cut(s) | 102, 812, 1068, 1517, 1536, 1596 |
| BfaI | CTAG | 3 cut(s) | 402, 840, 956 |
| BfoI | RGCGCY | 1 cut(s) | 156 |
| BfuI | GTATCC | 1 cut(s) | 1136 |
| BglII | AGATCT | 1 cut(s) | 806 |
| BisI | GCNGC | 4 cut(s) | 327, 522, 735, 1459 |
| BlpI | GCTNAGC | 2 cut(s) | 636, 641 |
| BlsI | GCNGC | 4 cut(s) | 328, 523, 736, 1460 |
| Bme1390I | CCNGG | 5 cut(s) | 233, 234, 750, 1284, 1674 |
| BmeT110I | CYCGRG | 3 cut(s) | 232, 338, 584 |
| BmgBI | CACGTC | 1 cut(s) | 112 |
| BmgT120I | GGNCC | 1 cut(s) | 239 |
| BmiI | GGNNCC | 2 cut(s) | 22, 531 |
| BmrFI | CCNGG | 5 cut(s) | 233, 234, 750, 1284, 1674 |
| BpiI | GAAGAC | 2 cut(s) | 152, 1571 |
| BpmI | CTGGAG | 3 cut(s) | 425, 978, 1144 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 636, 641 |
| Bpu14I | TTCGAA | 1 cut(s) | 903 |
| BpuEI | CTTGAG | 2 cut(s) | 743, 1459 |
| BpuMI | CCSGG | 2 cut(s) | 233, 234 |
| Bsa29I | ATCGAT | 3 cut(s) | 353, 1044, 1137 |
| BsaHI | GRCGYC | 1 cut(s) | 1706 |
| BsaJI | CCNNGG | 4 cut(s) | 232, 464, 748, 1515 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1001, 1457 |
| Bse21I | CCTNAGG | 1 cut(s) | 702 |
| BseBI | CCWGG | 3 cut(s) | 750, 1284, 1674 |
| BseCI | ATCGAT | 3 cut(s) | 353, 1044, 1137 |
| BseDI | CCNNGG | 4 cut(s) | 232, 464, 748, 1515 |
| BseGI | GGATG | 1 cut(s) | 1279 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1001, 1457 |
| BseMII | CTCAG | 7 cut(s) | 321, 627, 655, 693, 1551, 1668, 1692 |
| BseRI | GAGGAG | 1 cut(s) | 1535 |
| BseXI | GCAGC | 3 cut(s) | 313, 508, 746 |
| Bsh1236I | CGCG | 1 cut(s) | 263 |
| Bsh1285I | CGRYCG | 1 cut(s) | 189 |
| BshFI | GGCC | 1 cut(s) | 241 |
| BshVI | ATCGAT | 3 cut(s) | 353, 1044, 1137 |
| BsiEI | CGRYCG | 1 cut(s) | 189 |
| BsiHKAI | GWGCWC | 4 cut(s) | 642, 994, 1360, 1475 |
| BsiHKCI | CYCGRG | 3 cut(s) | 232, 338, 584 |
| BsiSI | CCGG | 4 cut(s) | 233, 1333, 1346, 1720 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1001, 1457 |
| BsmAI | GTCTC | 6 cut(s) | 102, 812, 1068, 1517, 1536, 1596 |
| BsmBI | CGTCTC | 3 cut(s) | 102, 1068, 1517 |
| BsmI | GAATGC | 1 cut(s) | 219 |
| BsnI | GGCC | 1 cut(s) | 241 |
| BsoBI | CYCGRG | 3 cut(s) | 232, 338, 584 |
| Bsp119I | TTCGAA | 1 cut(s) | 903 |
| Bsp1286I | GDGCHC | 4 cut(s) | 642, 994, 1360, 1475 |
| Bsp1407I | TGTACA | 1 cut(s) | 1399 |
| Bsp143I | GATC | 8 cut(s) | 20, 452, 529, 628, 806, 873, 976, 984 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 636, 641 |
| BspACI | CCGC | 3 cut(s) | 217, 690, 1458 |
| BspANI | GGCC | 1 cut(s) | 241 |
| BspCNI | CTCAG | 7 cut(s) | 322, 628, 654, 694, 1552, 1667, 1691 |
| BspDI | ATCGAT | 3 cut(s) | 353, 1044, 1137 |
| BspFNI | CGCG | 1 cut(s) | 263 |
| BspHI | TCATGA | 1 cut(s) | 756 |
| BspLI | GGNNCC | 2 cut(s) | 22, 531 |
| BspPI | GGATC | 5 cut(s) | 15, 28, 524, 537, 636 |
| BspT104I | TTCGAA | 1 cut(s) | 903 |
| BsrBI | CCGCTC | 1 cut(s) | 1458 |
| BsrGI | TGTACA | 1 cut(s) | 1399 |
| BssECI | CCNNGG | 4 cut(s) | 232, 464, 748, 1515 |
| BssMI | GATC | 8 cut(s) | 20, 452, 529, 628, 806, 873, 976, 984 |
| BssNI | GRCGYC | 1 cut(s) | 1706 |
| Bst2UI | CCWGG | 3 cut(s) | 750, 1284, 1674 |
| Bst4CI | ACNGT | 5 cut(s) | 495, 1012, 1088, 1109, 1690 |
| Bst6I | CTCTTC | 5 cut(s) | 144, 912, 1415, 1452, 1488 |
| BstACI | GRCGYC | 1 cut(s) | 1706 |
| BstAUI | TGTACA | 1 cut(s) | 1399 |
| BstBI | TTCGAA | 1 cut(s) | 903 |
| BstC8I | GCNNGC | 1 cut(s) | 1463 |
| BstDEI | CTNAG | 8 cut(s) | 330, 636, 641, 702, 1147, 1560, 1654, 1678 |
| BstDSI | CCRYGG | 2 cut(s) | 464, 1515 |
| BstEII | GGTNACC | 1 cut(s) | 1380 |
| BstF5I | GGATG | 1 cut(s) | 1279 |
| BstFNI | CGCG | 1 cut(s) | 263 |
| BstH2I | RGCGCY | 1 cut(s) | 156 |
| BstHHI | GCGC | 3 cut(s) | 155, 263, 326 |
| BstKTI | GATC | 8 cut(s) | 23, 455, 532, 631, 809, 876, 979, 987 |
| BstMAI | GTCTC | 6 cut(s) | 102, 812, 1068, 1517, 1536, 1596 |
| BstMBI | GATC | 8 cut(s) | 20, 452, 529, 628, 806, 873, 976, 984 |
| BstMCI | CGRYCG | 1 cut(s) | 189 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 518, 1124 |
| BstNI | CCWGG | 3 cut(s) | 750, 1284, 1674 |
| BstNSI | RCATGY | 1 cut(s) | 1267 |
| BstPI | GGTNACC | 1 cut(s) | 1380 |
| BstSCI | CCNGG | 5 cut(s) | 231, 232, 748, 1282, 1672 |
| BstUI | CGCG | 1 cut(s) | 263 |
| BstV1I | GCAGC | 3 cut(s) | 313, 508, 746 |
| BstV2I | GAAGAC | 2 cut(s) | 152, 1571 |
| BstX2I | RGATCY | 4 cut(s) | 20, 529, 628, 806 |
| BstYI | RGATCY | 4 cut(s) | 20, 529, 628, 806 |
| Bsu15I | ATCGAT | 3 cut(s) | 353, 1044, 1137 |
| Bsu36I | CCTNAGG | 1 cut(s) | 702 |
| BsuI | GTATCC | 1 cut(s) | 1136 |
| BsuRI | GGCC | 1 cut(s) | 241 |
| BsuTUI | ATCGAT | 3 cut(s) | 353, 1044, 1137 |
| BtgI | CCRYGG | 2 cut(s) | 464, 1515 |
| BtrI | CACGTC | 1 cut(s) | 112 |
| BtsCI | GGATG | 1 cut(s) | 1279 |
| Cac8I | GCNNGC | 1 cut(s) | 1463 |
| CciI | TCATGA | 1 cut(s) | 756 |
| CfoI | GCGC | 3 cut(s) | 155, 263, 326 |
| Cfr13I | GGNCC | 1 cut(s) | 239 |
| Cfr9I | CCCGGG | 1 cut(s) | 232 |
| ClaI | ATCGAT | 3 cut(s) | 353, 1044, 1137 |
| CseI | GACGC | 1 cut(s) | 1714 |
| Csp6I | GTAC | 3 cut(s) | 491, 605, 1400 |
| CviAII | CATG | 2 cut(s) | 757, 1264 |
| CviQI | GTAC | 3 cut(s) | 491, 605, 1400 |
| DdeI | CTNAG | 8 cut(s) | 330, 636, 641, 702, 1147, 1560, 1654, 1678 |
| DpnI | GATC | 8 cut(s) | 22, 454, 531, 630, 808, 875, 978, 986 |
| DpnII | GATC | 8 cut(s) | 20, 452, 529, 628, 806, 873, 976, 984 |
| DraI | TTTAAA | 1 cut(s) | 658 |
| DraIII | CACNNNGTG | 1 cut(s) | 1366 |
| Eam1104I | CTCTTC | 5 cut(s) | 144, 912, 1415, 1452, 1488 |
| EarI | CTCTTC | 5 cut(s) | 144, 912, 1415, 1452, 1488 |
| Ecl136II | GAGCTC | 3 cut(s) | 640, 992, 1473 |
| Eco24I | GRGCYC | 3 cut(s) | 642, 994, 1475 |
| Eco32I | GATATC | 1 cut(s) | 229 |
| Eco47III | AGCGCT | 1 cut(s) | 154 |
| Eco53kI | GAGCTC | 3 cut(s) | 640, 992, 1473 |
| Eco57I | CTGAAG | 2 cut(s) | 146, 492 |
| Eco81I | CCTNAGG | 1 cut(s) | 702 |
| Eco88I | CYCGRG | 3 cut(s) | 232, 338, 584 |
| Eco91I | GGTNACC | 1 cut(s) | 1380 |
| EcoICRI | GAGCTC | 3 cut(s) | 640, 992, 1473 |
| EcoO65I | GGTNACC | 1 cut(s) | 1380 |
| EcoRII | CCWGG | 3 cut(s) | 748, 1282, 1672 |
| EcoRV | GATATC | 1 cut(s) | 229 |
| EcoT38I | GRGCYC | 3 cut(s) | 642, 994, 1475 |
| Esp3I | CGTCTC | 3 cut(s) | 102, 1068, 1517 |
| FaeI | CATG | 2 cut(s) | 760, 1267 |
| FatI | CATG | 2 cut(s) | 756, 1263 |
| FbaI | TGATCA | 2 cut(s) | 873, 984 |
| FblI | GTMKAC | 2 cut(s) | 1181, 1712 |
| Fnu4HI | GCNGC | 4 cut(s) | 327, 522, 735, 1459 |
| FokI | GGATG | 1 cut(s) | 1266 |
| FriOI | GRGCYC | 3 cut(s) | 642, 994, 1475 |
| Fsp4HI | GCNGC | 4 cut(s) | 327, 522, 735, 1459 |
| FspBI | CTAG | 3 cut(s) | 402, 840, 956 |
| GlaI | GCGC | 3 cut(s) | 154, 262, 325 |
| GluI | GCNGC | 4 cut(s) | 327, 522, 735, 1459 |
| GsuI | CTGGAG | 3 cut(s) | 425, 978, 1144 |
| HaeII | RGCGCY | 1 cut(s) | 156 |
| HaeIII | GGCC | 1 cut(s) | 241 |
| HapII | CCGG | 4 cut(s) | 233, 1333, 1346, 1720 |
| HgaI | GACGC | 1 cut(s) | 1714 |
| HhaI | GCGC | 3 cut(s) | 155, 263, 326 |
| Hin1I | GRCGYC | 1 cut(s) | 1706 |
| Hin1II | CATG | 2 cut(s) | 760, 1267 |
| Hin6I | GCGC | 3 cut(s) | 153, 261, 324 |
| HinP1I | GCGC | 3 cut(s) | 153, 261, 324 |
| HincII | GTYRAC | 1 cut(s) | 1713 |
| HindII | GTYRAC | 1 cut(s) | 1713 |
| HindIII | AAGCTT | 2 cut(s) | 572, 1607 |
| HpaII | CCGG | 4 cut(s) | 233, 1333, 1346, 1720 |
| HphI | GGTGA | 3 cut(s) | 986, 1016, 1706 |
| Hpy166II | GTNNAC | 3 cut(s) | 376, 1182, 1713 |
| Hpy8I | GTNNAC | 3 cut(s) | 376, 1182, 1713 |
| Hpy99I | CGWCG | 5 cut(s) | 451, 1540, 1694, 1708, 1714 |
| HpyAV | CCTTC | 2 cut(s) | 1452, 1719 |
| HpyCH4III | ACNGT | 5 cut(s) | 495, 1012, 1088, 1109, 1690 |
| HpyCH4IV | ACGT | 1 cut(s) | 111 |
| HpyCH4V | TGCA | 4 cut(s) | 536, 734, 1205, 1369 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 518, 1124 |
| HpyF3I | CTNAG | 8 cut(s) | 330, 636, 641, 702, 1147, 1560, 1654, 1678 |
| HpySE526I | ACGT | 1 cut(s) | 111 |
| Hsp92I | GRCGYC | 1 cut(s) | 1706 |
| Hsp92II | CATG | 2 cut(s) | 760, 1267 |
| HspAI | GCGC | 3 cut(s) | 153, 261, 324 |
| Ksp22I | TGATCA | 2 cut(s) | 873, 984 |
| Kzo9I | GATC | 8 cut(s) | 20, 452, 529, 628, 806, 873, 976, 984 |
| LmnI | GCTCC | 2 cut(s) | 997, 1470 |
| Lsp1109I | GCAGC | 3 cut(s) | 313, 508, 746 |
| MaeI | CTAG | 3 cut(s) | 402, 840, 956 |
| MaeII | ACGT | 1 cut(s) | 111 |
| MaeIII | GTNAC | 6 cut(s) | 272, 286, 1054, 1380, 1507, 1681 |
| MalI | GATC | 8 cut(s) | 22, 454, 531, 630, 808, 875, 978, 986 |
| MbiI | CCGCTC | 1 cut(s) | 1458 |
| MboI | GATC | 8 cut(s) | 20, 452, 529, 628, 806, 873, 976, 984 |
| MfeI | CAATTG | 1 cut(s) | 1200 |
| MflI | RGATCY | 4 cut(s) | 20, 529, 628, 806 |
| MhlI | GDGCHC | 4 cut(s) | 642, 994, 1360, 1475 |
| MluCI | AATT | 7 cut(s) | 99, 116, 266, 1174, 1200, 1319, 1337 |
| MlyI | GAGTC | 6 cut(s) | 283, 419, 512, 1401, 1511, 1708 |
| MmeI | TCCRAC | 3 cut(s) | 85, 795, 1618 |
| MseI | TTAA | 5 cut(s) | 657, 932, 1040, 1133, 1322 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1242, 1262 |
| MspI | CCGG | 4 cut(s) | 233, 1333, 1346, 1720 |
| MspR9I | CCNGG | 5 cut(s) | 233, 234, 750, 1284, 1674 |
| MunI | CAATTG | 1 cut(s) | 1200 |
| Mva1269I | GAATGC | 1 cut(s) | 219 |
| MvaI | CCWGG | 3 cut(s) | 750, 1284, 1674 |
| MvnI | CGCG | 1 cut(s) | 263 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 518, 1124 |
| NciI | CCSGG | 2 cut(s) | 233, 234 |
| NdeII | GATC | 8 cut(s) | 20, 452, 529, 628, 806, 873, 976, 984 |
| NlaIII | CATG | 2 cut(s) | 760, 1267 |
| NlaIV | GGNNCC | 2 cut(s) | 22, 531 |
| NmuCI | GTSAC | 2 cut(s) | 286, 1507 |
| NspI | RCATGY | 1 cut(s) | 1267 |
| NspV | TTCGAA | 1 cut(s) | 903 |
| OliI | CACNNNNGTG | 1 cut(s) | 1242 |
| PaeR7I | CTCGAG | 1 cut(s) | 338 |
| PagI | TCATGA | 1 cut(s) | 756 |
| PciI | ACATGT | 1 cut(s) | 1263 |
| PcsI | WCGNNNNNNNCGW | 5 cut(s) | 80, 1101, 1523, 1532, 1709 |
| PctI | GAATGC | 1 cut(s) | 219 |
| PfeI | GAWTC | 8 cut(s) | 32, 350, 367, 744, 760, 867, 942, 1164 |
| PflFI | GACNNNGTC | 1 cut(s) | 1708 |
| PfoI | TCCNGGA | 1 cut(s) | 1282 |
| PkrI | GCNGC | 4 cut(s) | 328, 523, 736, 1460 |
| PleI | GAGTC | 6 cut(s) | 283, 419, 511, 1400, 1510, 1708 |
| PpsI | GAGTC | 6 cut(s) | 283, 419, 511, 1400, 1510, 1708 |
| PscI | ACATGT | 1 cut(s) | 1263 |
| PshBI | ATTAAT | 1 cut(s) | 1322 |
| PsiI | TTATAA | 1 cut(s) | 561 |
| Psp124BI | GAGCTC | 3 cut(s) | 642, 994, 1475 |
| Psp6I | CCWGG | 3 cut(s) | 748, 1282, 1672 |
| PspEI | GGTNACC | 1 cut(s) | 1380 |
| PspGI | CCWGG | 3 cut(s) | 748, 1282, 1672 |
| PspN4I | GGNNCC | 2 cut(s) | 22, 531 |
| PspPI | GGNCC | 1 cut(s) | 239 |
| PsuI | RGATCY | 4 cut(s) | 20, 529, 628, 806 |
| PsyI | GACNNNGTC | 1 cut(s) | 1708 |
| RsaI | GTAC | 3 cut(s) | 492, 606, 1401 |
| RsaNI | GTAC | 3 cut(s) | 491, 605, 1400 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1242, 1262 |
| SacI | GAGCTC | 3 cut(s) | 642, 994, 1475 |
| SalI | GTCGAC | 1 cut(s) | 1711 |
| SaqAI | TTAA | 5 cut(s) | 657, 932, 1040, 1133, 1322 |
| SatI | GCNGC | 4 cut(s) | 327, 522, 735, 1459 |
| Sau3AI | GATC | 8 cut(s) | 20, 452, 529, 628, 806, 873, 976, 984 |
| Sau96I | GGNCC | 1 cut(s) | 239 |
| SchI | GAGTC | 6 cut(s) | 283, 419, 512, 1401, 1511, 1708 |
| ScrFI | CCNGG | 5 cut(s) | 233, 234, 750, 1284, 1674 |
| SduI | GDGCHC | 4 cut(s) | 642, 994, 1360, 1475 |
| Sfr274I | CTCGAG | 1 cut(s) | 338 |
| SfuI | TTCGAA | 1 cut(s) | 903 |
| SlaI | CTCGAG | 1 cut(s) | 338 |
| SmaI | CCCGGG | 1 cut(s) | 234 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1242, 1262 |
| SmlI | CTYRAG | 3 cut(s) | 338, 722, 1474 |
| SmoI | CTYRAG | 3 cut(s) | 338, 722, 1474 |
| Sse9I | AATT | 7 cut(s) | 99, 116, 266, 1174, 1200, 1319, 1337 |
| SsiI | CCGC | 3 cut(s) | 217, 690, 1458 |
| SspMI | CTAG | 3 cut(s) | 402, 840, 956 |
| SstI | GAGCTC | 3 cut(s) | 642, 994, 1475 |
| StyD4I | CCNGG | 5 cut(s) | 231, 232, 748, 1282, 1672 |
| TaaI | ACNGT | 5 cut(s) | 495, 1012, 1088, 1109, 1690 |
| TaiI | ACGT | 1 cut(s) | 114 |
| TaqII | GACCGA | 1 cut(s) | 203 |
| TasI | AATT | 7 cut(s) | 99, 116, 266, 1174, 1200, 1319, 1337 |
| TatI | WGTACW | 1 cut(s) | 1399 |
| TauI | GCSGC | 1 cut(s) | 1461 |
| TfiI | GAWTC | 8 cut(s) | 32, 350, 367, 744, 760, 867, 942, 1164 |
| Tru1I | TTAA | 5 cut(s) | 657, 932, 1040, 1133, 1322 |
| Tru9I | TTAA | 5 cut(s) | 657, 932, 1040, 1133, 1322 |
| TseFI | GTSAC | 2 cut(s) | 286, 1507 |
| TseI | GCWGC | 3 cut(s) | 326, 521, 734 |
| Tsp45I | GTSAC | 2 cut(s) | 286, 1507 |
| TspGWI | ACGGA | 4 cut(s) | 89, 291, 453, 1532 |
| TspMI | CCCGGG | 1 cut(s) | 232 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1708 |
| VspI | ATTAAT | 1 cut(s) | 1322 |
| XapI | RAATTY | 2 cut(s) | 116, 266 |
| XceI | RCATGY | 1 cut(s) | 1267 |
| XhoI | CTCGAG | 1 cut(s) | 338 |
| XmaI | CCCGGG | 1 cut(s) | 232 |
| XmiI | GTMKAC | 2 cut(s) | 1181, 1712 |
| XspI | CTAG | 3 cut(s) | 402, 840, 956 |