Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0003992

Physical Location & Seq

Genomic Coordinates Forward (+)

22750493 .. 22755966

Gene Structure 5474 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G222500.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1887 bp

ATGAAGTTCATGAAGCTTGGATCCAAACCTGATTTCTTCCAGACTGATGGAGACAATATAAGGTACGTCGCAACTGAGTTGGCAACTGACCTAGTTGTTAACGTCGGAGATGTGAAATTTTATTTGCACAAGTTTCCGCTTTTGTCCAAGAGTGCACGCCTGCAGAAACTGGTCGCAACCACAAATGAAAACAGTGATGAGATCCACATCCATGATATTCCTGGTGGACCTGCTGCTTTTGAAATATGTGCCAAGTTCTGTTACGGCATGACGGTCACTCTCAATGCATACAATGTGGTTGCAACTCGATGTGCAGCAGAATACCTGGAGATGTATGAAACTGTTGAGAAAGGAAACCTTGTCTACAAGGTTGAAGTCTTCCTAAACTCTAGCATCTTCCGCAGCTGGAAAGACTCAATTATTGTTCTTCAGACTACCAGGTCGCTTCTTCCATGGTCCGAAGAAGTTAAGGTGGTGAGCCACTGCCTTGATTCCATAGCTTCCAAGGCTTCCATTGATACCTCCAAGGTGGAATGGTCATATACATATAACCTAAAAAAGCTACCATCCGATAATGGGAATGAACACTGGAATGGTGTGGGAAAACAGCAAGTAGTTCCAAAAGACTGGTGGGTAGAAGACCTCTGTGGTCTTCAACTTGATTTATACAAGCGGGTGATAAATATAATTAAGACCAAGGGAAAACTCTCTGGTGATGTGATAGGGGAAGCCTTAAAGGCATATTCTACCAGAAGGTTATCGGGTTTTAGCAAGGGTATGATTCAGGGTGGTGATGTCATAAAGAATAGATCATTGGTGGAGACTGTAATCCACTTACTTCCTGCAGGCAGTGTCCCTTGCAGTTTCTTACTTAAGTTGTTAAAAGCAGCAATATCGTTAGAATGTGGAGAAATGGAAAAAAGTGAATTGATTAGCAAAATTGGTCAGCAGCTTGATGAGGCTACAGTTTCTGATCTTTTAATTCAAGCCCCAACTGAGGAAGCACTGATGTATGAAGTTGATATAGTGCAAAACCTAATTGAGGAGTTTGTGACACTTGATCGAAGTGCTCAAACTGATCCTTCAATGGAAGCTGAATTCCAGGAGATTAGAAGCCCCAGGTTCCTATCAGATACTTCCAAGGTGAAGGTGGCAAAACTGGTTGATGGCTACCTTACCGAAGTTTCACGTGATCCCAACTTACCTGCATCAAAGTTTGTCAGGCTTGCTGAAATGGTATCAAACTTCTCAAGACCAACCCATGATGGACTTTATCGTGCCATTGACATGTATCTAAAGGAACACCCAGGGATCAGCAAGAGTGAGAGGAAGAGAATATGCAAATTGATGGATTGCAGGAAGTTGTCAACAGATGCCTGCATGCATGCTGTACAAAATGAGCGGCTGCCCTTAAGAGTCGTTGTGCAGGTCCTTTTCTTTGAACAGATTAGGGCTTCAGCATCCGGCGGCAACAGCACACCTGATCTACAAGGGTCCATCAGGGCCTTGCTCCCTGGTGGGTCTCATGGGAGTTCAAGGTCCACTACAACCAACACAGAAGAGGACTGGGATGCTGTGCCGACAGCGGAGGAAATCAAAGCTTTAAAAGGGGAGCTTGCTACTCTAAGGTTAGGTGATGCGAATCGGGGAGTAGGCAATGATAGAAACGCGAATCACGGTGCTACAAATAATTCTGAAAAAGTTGCTGCCAGTAAAATGAAAGGTTTGCTCATGTCAAAAAAGATATTTTCTAAGCTCTGGTCAAGCAAAGAAAGGAATGGTGAAATTACCAGTTCTAACACATCGGAGAGCCCTGGTTCTACTTCTACCAATGCAGAAGAAACAAAATCCACCCGGTCGAGGAGTAGGAGGCATTCAGTATCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005623 GO:0007275 GO:0008150 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009791 GO:0009908 GO:0009958 GO:0022414 GO:0032501 GO:0032502 GO:0044464 GO:0048367 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0071944 GO:0090567

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB NPH3

Protein Analysis

629

Amino Acids

69.63

Weight (kDa)

7.56

Isoelectric Point (pI)

39.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003992)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23050 AT2G23050 AT4G37590 AT5G67440 AT5G67440 AT5G67440
fragaria_vesca	FvH4_1g17440 FvH4_1g17440 FvH4_1g17440 FvH4_1g17440 FvH4_1g17440 FvH4_1g17440 FvH4_1g17440
malus_domestica	MD02G1183500.v1.1 MD15G1295200.v1.1
prunus_persica	Prupe.6G222500_v2.0.a1 Prupe.6G222500_v2.0.a1 Prupe.6G222500_v2.0.a1 Prupe.6G222500_v2.0.a1 Prupe.6G222500_v2.0.a1
pyrus_communis	pycom02g14920 pycom15g25820
rosa_chinensis	RchiOBHm_Chr2g0107651
rosa_laevigata	RLG00000017605
rosa_roxburghii	Rroxscaffold_2G00136090
rosa_rugosa	Rorug02G0146100 Rorug02G0146100
rosa_samantha	Rh2AG195900 Rh2BG208300 Rh2CG201000 Rh2DG203400 Rh6AG399700
rosa_wichuraiana	Rw2G015500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	439
Acc36I	ACCTGC	3 cut(s)	238, 1213, 1417
AccBSI	CCGCTC	1 cut(s)	1402
AccI	GTMKAC	1 cut(s)	363
AccII	CGCG	1 cut(s)	1670
AciI	CCGC	6 cut(s)	137, 400, 673, 1402, 1467, 1586
AclWI	GGATC	6 cut(s)	15, 28, 196, 1073, 1187, 1319
AcsI	RAATTY	2 cut(s)	116, 1097
AcuI	CTGAAG	2 cut(s)	413, 1440
AcvI	CACGTG	1 cut(s)	1190
AfaI	GTAC	2 cut(s)	65, 1392
AfiI	CCNNNNNNNGG	4 cut(s)	576, 997, 1042, 1860
AflII	CTTAAG	2 cut(s)	872, 1411
AflIII	ACRYGT	1 cut(s)	1287
AgsI	TTSAA	7 cut(s)	242, 374, 656, 986, 1086, 1442, 1536
AjnI	CCWGG	8 cut(s)	220, 324, 437, 1101, 1118, 1306, 1513, 1813
AjuI	GAANNNNNNNTTGG	4 cut(s)	17, 49, 797, 829
AluBI	AGCT	9 cut(s)	16, 405, 500, 562, 952, 1094, 1601, 1615, 1756
AluI	AGCT	9 cut(s)	16, 405, 500, 562, 952, 1094, 1601, 1615, 1756
Alw21I	GWGCWC	2 cut(s)	157, 1072
Alw26I	GTCTC	3 cut(s)	45, 815, 1527
Alw44I	GTGCAC	1 cut(s)	153
AlwI	GGATC	6 cut(s)	15, 28, 196, 1073, 1187, 1319
AlwNI	CAGNNNCTG	2 cut(s)	169, 971
AoxI	GGCC	1 cut(s)	1503
ApaLI	GTGCAC	1 cut(s)	153
ApeKI	GCWGC	7 cut(s)	233, 314, 402, 887, 949, 1405, 1706
ApoI	RAATTY	2 cut(s)	116, 1097
AspS9I	GGNCC	6 cut(s)	227, 456, 1429, 1494, 1503, 1539
AsuC2I	CCSGG	1 cut(s)	1855
AsuHPI	GGTGA	7 cut(s)	487, 688, 725, 803, 1156, 1646, 1793
AvaII	GGWCC	5 cut(s)	227, 456, 1429, 1494, 1539
BaeGI	GKGCMC	1 cut(s)	157
BamHI	GGATCC	1 cut(s)	20
BanII	GRGCYC	1 cut(s)	1814
BbrPI	CACGTG	1 cut(s)	1190
BbsI	GAAGAC	3 cut(s)	370, 644, 645
Bbv12I	GWGCWC	2 cut(s)	157, 1072
BbvI	GCAGC	7 cut(s)	220, 326, 414, 899, 961, 1392, 1693
BccI	CCATC	6 cut(s)	41, 574, 1160, 1259, 1342, 1505
BceAI	ACGGC	1 cut(s)	280
BcgI	CGANNNNNNTGC	2 cut(s)	876, 910
BciT130I	CCWGG	8 cut(s)	222, 326, 439, 1103, 1120, 1308, 1515, 1815
BcnI	CCSGG	1 cut(s)	1855
BcoDI	GTCTC	3 cut(s)	45, 815, 1527
BfaI	CTAG	2 cut(s)	92, 390
BfmI	CTRYAG	3 cut(s)	161, 843, 963
BfrI	CTTAAG	2 cut(s)	872, 1411
BfuAI	ACCTGC	3 cut(s)	238, 1213, 1417
BglI	GCCNNNNNGGC	1 cut(s)	737
BisI	GCNGC	9 cut(s)	234, 315, 403, 888, 950, 1403, 1406, 1468, 1707
BlsI	GCNGC	9 cut(s)	235, 316, 404, 889, 951, 1404, 1407, 1469, 1708
Bme1390I	CCNGG	9 cut(s)	222, 326, 439, 1103, 1120, 1308, 1515, 1815, 1855
Bme18I	GGWCC	5 cut(s)	227, 456, 1429, 1494, 1539
BmgT120I	GGNCC	6 cut(s)	227, 456, 1429, 1494, 1503, 1539
BmiI	GGNNCC	3 cut(s)	22, 1124, 1495
BmrFI	CCNGG	9 cut(s)	222, 326, 439, 1103, 1120, 1308, 1515, 1815, 1855
BmrI	ACTGGG	1 cut(s)	1576
BmsI	GCATC	6 cut(s)	402, 1217, 1363, 1469, 1561, 1627
BmuI	ACTGGG	1 cut(s)	1576
BpiI	GAAGAC	3 cut(s)	370, 644, 645
BpmI	CTGGAG	1 cut(s)	347
BpuEI	CTTGAG	1 cut(s)	1234
BpuMI	CCSGG	1 cut(s)	1855
BsaAI	YACGTR	1 cut(s)	1190
BsaBI	GATNNNNATC	2 cut(s)	206, 1641
BsaI	GGTCTC	1 cut(s)	1527
Bsc4I	CCNNNNNNNGG	4 cut(s)	576, 997, 1042, 1860
Bse1I	ACTGG	7 cut(s)	174, 593, 632, 1164, 1571, 1710, 1791
Bse3DI	GCAATG	1 cut(s)	1663
Bse8I	GATNNNNATC	2 cut(s)	206, 1641
BseBI	CCWGG	8 cut(s)	222, 326, 439, 1103, 1120, 1308, 1515, 1815
BseGI	GGATG	4 cut(s)	207, 566, 1460, 1576
BseJI	GATNNNNATC	2 cut(s)	206, 1641
BseLI	CCNNNNNNNGG	4 cut(s)	576, 997, 1042, 1860
BseMI	GCAATG	1 cut(s)	1663
BseMII	CTCAG	2 cut(s)	66, 987
BseNI	ACTGG	7 cut(s)	174, 593, 632, 1164, 1571, 1710, 1791
BseRI	GAGGAG	2 cut(s)	1058, 1876
BseSI	GKGCMC	1 cut(s)	157
BseXI	GCAGC	7 cut(s)	220, 326, 414, 899, 961, 1392, 1693
BsgI	GTGCAG	2 cut(s)	333, 1445
Bsh1236I	CGCG	1 cut(s)	1670
Bsh1285I	CGRYCG	1 cut(s)	1859
BshFI	GGCC	1 cut(s)	1505
BsiEI	CGRYCG	1 cut(s)	1859
BsiHKAI	GWGCWC	2 cut(s)	157, 1072
BsiSI	CCGG	2 cut(s)	1464, 1855
BslFI	GGGAC	1 cut(s)	839
BslI	CCNNNNNNNGG	4 cut(s)	576, 997, 1042, 1860
BsmAI	GTCTC	3 cut(s)	45, 815, 1527
BsmFI	GGGAC	1 cut(s)	839
BsmI	GAATGC	1 cut(s)	1873
BsnI	GGCC	1 cut(s)	1505
Bso31I	GGTCTC	1 cut(s)	1527
Bsp1286I	GDGCHC	3 cut(s)	157, 1072, 1814
Bsp1407I	TGTACA	1 cut(s)	1390
Bsp143I	GATC	9 cut(s)	20, 201, 809, 973, 1060, 1078, 1192, 1311, 1483
Bsp19I	CCATGG	1 cut(s)	452
BspACI	CCGC	6 cut(s)	137, 400, 673, 1402, 1467, 1586
BspANI	GGCC	1 cut(s)	1505
BspCNI	CTCAG	2 cut(s)	67, 988
BspFNI	CGCG	1 cut(s)	1670
BspHI	TCATGA	1 cut(s)	9
BspLI	GGNNCC	3 cut(s)	22, 1124, 1495
BspMAI	CTGCAG	2 cut(s)	165, 847
BspMI	ACCTGC	3 cut(s)	238, 1213, 1417
BspPI	GGATC	6 cut(s)	15, 28, 196, 1073, 1187, 1319
BspTI	CTTAAG	2 cut(s)	872, 1411
BspTNI	GGTCTC	1 cut(s)	1527
BsrBI	CCGCTC	1 cut(s)	1402
BsrDI	GCAATG	1 cut(s)	1663
BsrGI	TGTACA	1 cut(s)	1390
BsrI	ACTGG	7 cut(s)	174, 593, 632, 1164, 1571, 1710, 1791
BssMI	GATC	9 cut(s)	20, 201, 809, 973, 1060, 1078, 1192, 1311, 1483
BssT1I	CCWWGG	5 cut(s)	452, 504, 525, 696, 1140
Bst2UI	CCWGG	8 cut(s)	222, 326, 439, 1103, 1120, 1308, 1515, 1815
Bst4CI	ACNGT	6 cut(s)	194, 274, 343, 826, 967, 1679
Bst6I	CTCTTC	2 cut(s)	1325, 1554
BstAFI	CTTAAG	2 cut(s)	872, 1411
BstAUI	TGTACA	1 cut(s)	1390
BstBAI	YACGTR	1 cut(s)	1190
BstC8I	GCNNGC	8 cut(s)	157, 161, 847, 1227, 1378, 1382, 1386, 1617
BstDEI	CTNAG	5 cut(s)	75, 996, 1625, 1752, 1884
BstDSI	CCRYGG	1 cut(s)	452
BstENI	CCTNNNNNAGG	1 cut(s)	1040
BstF5I	GGATG	4 cut(s)	207, 566, 1460, 1576
BstFNI	CGCG	1 cut(s)	1670
BstKTI	GATC	9 cut(s)	23, 204, 812, 976, 1063, 1081, 1195, 1314, 1486
BstMAI	GTCTC	3 cut(s)	45, 815, 1527
BstMBI	GATC	9 cut(s)	20, 201, 809, 973, 1060, 1078, 1192, 1311, 1483
BstMCI	CGRYCG	1 cut(s)	1859
BstMWI	GCNNNNNNNGC	4 cut(s)	399, 506, 737, 1473
BstNI	CCWGG	8 cut(s)	222, 326, 439, 1103, 1120, 1308, 1515, 1815
BstNSI	RCATGY	3 cut(s)	1291, 1384, 1388
BstSCI	CCNGG	9 cut(s)	220, 324, 437, 1101, 1118, 1306, 1513, 1813, 1853
BstSFI	CTRYAG	3 cut(s)	161, 843, 963
BstSLI	GKGCMC	1 cut(s)	157
BstUI	CGCG	1 cut(s)	1670
BstV1I	GCAGC	7 cut(s)	220, 326, 414, 899, 961, 1392, 1693
BstV2I	GAAGAC	3 cut(s)	370, 644, 645
BstX2I	RGATCY	2 cut(s)	20, 201
BstXI	CCANNNNNNTGG	2 cut(s)	47, 627
BstYI	RGATCY	2 cut(s)	20, 201
BsuRI	GGCC	1 cut(s)	1505
BtgI	CCRYGG	1 cut(s)	452
BtsCI	GGATG	4 cut(s)	207, 566, 1460, 1576
BtsI	GCAGTG	2 cut(s)	481, 856
BtsIMutI	CAGTG	5 cut(s)	199, 481, 586, 856, 1004
BveI	ACCTGC	3 cut(s)	238, 1213, 1417
Cac8I	GCNNGC	8 cut(s)	157, 161, 847, 1227, 1378, 1382, 1386, 1617
CaiI	CAGNNNCTG	2 cut(s)	169, 971
CciI	TCATGA	1 cut(s)	9
Cfr13I	GGNCC	6 cut(s)	227, 456, 1429, 1494, 1503, 1539
CsiI	ACCWGGT	1 cut(s)	437
Csp6I	GTAC	2 cut(s)	64, 1391
CviQI	GTAC	2 cut(s)	64, 1391
DdeI	CTNAG	5 cut(s)	75, 996, 1625, 1752, 1884
DpnI	GATC	9 cut(s)	22, 203, 811, 975, 1062, 1080, 1194, 1313, 1485
DpnII	GATC	9 cut(s)	20, 201, 809, 973, 1060, 1078, 1192, 1311, 1483
DraI	TTTAAA	1 cut(s)	1605
DrdI	GACNNNNNNGTC	1 cut(s)	439
DseDI	GACNNNNNNGTC	1 cut(s)	439
Eam1104I	CTCTTC	2 cut(s)	1325, 1554
EarI	CTCTTC	2 cut(s)	1325, 1554
Eco130I	CCWWGG	5 cut(s)	452, 504, 525, 696, 1140
Eco24I	GRGCYC	1 cut(s)	1814
Eco31I	GGTCTC	1 cut(s)	1527
Eco47I	GGWCC	5 cut(s)	227, 456, 1429, 1494, 1539
Eco57I	CTGAAG	2 cut(s)	413, 1440
Eco72I	CACGTG	1 cut(s)	1190
EcoNI	CCTNNNNNAGG	1 cut(s)	1040
EcoO109I	RGGNCCY	2 cut(s)	1429, 1503
EcoRI	GAATTC	1 cut(s)	1097
EcoRII	CCWGG	8 cut(s)	220, 324, 437, 1101, 1118, 1306, 1513, 1813
EcoT14I	CCWWGG	5 cut(s)	452, 504, 525, 696, 1140
EcoT22I	ATGCAT	2 cut(s)	289, 1386
EcoT38I	GRGCYC	1 cut(s)	1814
ErhI	CCWWGG	5 cut(s)	452, 504, 525, 696, 1140
FalI	AAGNNNNNCTT	4 cut(s)	342, 374, 1599, 1631
FaqI	GGGAC	1 cut(s)	839
FauI	CCCGC	1 cut(s)	666
FblI	GTMKAC	1 cut(s)	363
Fnu4HI	GCNGC	9 cut(s)	234, 315, 403, 888, 950, 1403, 1406, 1468, 1707
FokI	GGATG	4 cut(s)	194, 553, 1447, 1583
FriOI	GRGCYC	1 cut(s)	1814
Fsp4HI	GCNGC	9 cut(s)	234, 315, 403, 888, 950, 1403, 1406, 1468, 1707
FspBI	CTAG	2 cut(s)	92, 390
GluI	GCNGC	9 cut(s)	234, 315, 403, 888, 950, 1403, 1406, 1468, 1707
GsuI	CTGGAG	1 cut(s)	347
HaeIII	GGCC	1 cut(s)	1505
HapII	CCGG	2 cut(s)	1464, 1855
HincII	GTYRAC	2 cut(s)	100, 1368
HindII	GTYRAC	2 cut(s)	100, 1368
HindIII	AAGCTT	2 cut(s)	14, 1599
HinfI	GANTC	6 cut(s)	413, 491, 781, 1416, 1642, 1672
HpaI	GTTAAC	1 cut(s)	100
HpaII	CCGG	2 cut(s)	1464, 1855
HphI	GGTGA	7 cut(s)	487, 688, 725, 803, 1156, 1646, 1793
Hpy166II	GTNNAC	6 cut(s)	100, 155, 227, 364, 1368, 1542
Hpy188I	TCNGA	8 cut(s)	107, 432, 460, 571, 973, 1132, 1696, 1807
Hpy188III	TCNNGA	3 cut(s)	10, 40, 1251
Hpy8I	GTNNAC	6 cut(s)	100, 155, 227, 364, 1368, 1542
Hpy99I	CGWCG	2 cut(s)	71, 107
HpyAV	CCTTC	3 cut(s)	747, 1092, 1141
HpyCH4III	ACNGT	6 cut(s)	194, 274, 343, 826, 967, 1679
HpyCH4IV	ACGT	3 cut(s)	66, 102, 1189
HpyF10VI	GCNNNNNNNGC	4 cut(s)	399, 506, 737, 1473
HpyF3I	CTNAG	5 cut(s)	75, 996, 1625, 1752, 1884
HpySE526I	ACGT	3 cut(s)	66, 102, 1189
KspAI	GTTAAC	1 cut(s)	100
Kzo9I	GATC	9 cut(s)	20, 201, 809, 973, 1060, 1078, 1192, 1311, 1483
LmnI	GCTCC	2 cut(s)	1515, 1612
Lsp1109I	GCAGC	7 cut(s)	220, 326, 414, 899, 961, 1392, 1693
LweI	GCATC	6 cut(s)	402, 1217, 1363, 1469, 1561, 1627
MabI	ACCWGGT	1 cut(s)	437
MaeI	CTAG	2 cut(s)	92, 390
MaeII	ACGT	3 cut(s)	66, 102, 1189
MaeIII	GTNAC	3 cut(s)	260, 274, 1051
MalI	GATC	9 cut(s)	22, 203, 811, 975, 1062, 1080, 1194, 1313, 1485
MbiI	CCGCTC	1 cut(s)	1402
MboI	GATC	9 cut(s)	20, 201, 809, 973, 1060, 1078, 1192, 1311, 1483
MflI	RGATCY	2 cut(s)	20, 201
MhlI	GDGCHC	3 cut(s)	157, 1072, 1814
MlyI	GAGTC	2 cut(s)	407, 1425
MmeI	TCCRAC	1 cut(s)	85
Mph1103I	ATGCAT	2 cut(s)	289, 1386
MseI	TTAA	9 cut(s)	99, 468, 690, 734, 873, 881, 980, 1412, 1604
MslI	CAYNNNNRTG	3 cut(s)	210, 591, 1286
MspA1I	CMGCKG	2 cut(s)	405, 1586
MspCI	CTTAAG	2 cut(s)	872, 1411
MspI	CCGG	2 cut(s)	1464, 1855
MspR9I	CCNGG	9 cut(s)	222, 326, 439, 1103, 1120, 1308, 1515, 1815, 1855
Mva1269I	GAATGC	1 cut(s)	1873
MvaI	CCWGG	8 cut(s)	222, 326, 439, 1103, 1120, 1308, 1515, 1815
MvnI	CGCG	1 cut(s)	1670
MwoI	GCNNNNNNNGC	4 cut(s)	399, 506, 737, 1473
NciI	CCSGG	1 cut(s)	1855
NcoI	CCATGG	1 cut(s)	452
NdeII	GATC	9 cut(s)	20, 201, 809, 973, 1060, 1078, 1192, 1311, 1483
NlaIV	GGNNCC	3 cut(s)	22, 1124, 1495
NmuCI	GTSAC	2 cut(s)	274, 1051
NsiI	ATGCAT	2 cut(s)	289, 1386
NspI	RCATGY	3 cut(s)	1291, 1384, 1388
PaeI	GCATGC	2 cut(s)	1384, 1388
PagI	TCATGA	1 cut(s)	9
PasI	CCCWGGG	1 cut(s)	1307
PciI	ACATGT	1 cut(s)	1287
PctI	GAATGC	1 cut(s)	1873
PfeI	GAWTC	4 cut(s)	491, 781, 1642, 1672
PfoI	TCCNGGA	1 cut(s)	1101
PkrI	GCNGC	9 cut(s)	235, 316, 404, 889, 951, 1404, 1407, 1469, 1708
PleI	GAGTC	2 cut(s)	407, 1424
PmaCI	CACGTG	1 cut(s)	1190
PmlI	CACGTG	1 cut(s)	1190
PpsI	GAGTC	2 cut(s)	407, 1424
Ppu21I	YACGTR	1 cut(s)	1190
PpuMI	RGGWCCY	1 cut(s)	1429
PscI	ACATGT	1 cut(s)	1287
Psp5II	RGGWCCY	1 cut(s)	1429
Psp6I	CCWGG	8 cut(s)	220, 324, 437, 1101, 1118, 1306, 1513, 1813
PspCI	CACGTG	1 cut(s)	1190
PspGI	CCWGG	8 cut(s)	220, 324, 437, 1101, 1118, 1306, 1513, 1813
PspN4I	GGNNCC	3 cut(s)	22, 1124, 1495
PspPI	GGNCC	6 cut(s)	227, 456, 1429, 1494, 1503, 1539
PspPPI	RGGWCCY	1 cut(s)	1429
PstI	CTGCAG	2 cut(s)	165, 847
PstNI	CAGNNNCTG	2 cut(s)	169, 971
PsuI	RGATCY	2 cut(s)	20, 201
PvuII	CAGCTG	1 cut(s)	405
RsaI	GTAC	2 cut(s)	65, 1392
RsaNI	GTAC	2 cut(s)	64, 1391
RseI	CAYNNNNRTG	3 cut(s)	210, 591, 1286
SaqAI	TTAA	9 cut(s)	99, 468, 690, 734, 873, 881, 980, 1412, 1604
SatI	GCNGC	9 cut(s)	234, 315, 403, 888, 950, 1403, 1406, 1468, 1707
Sau3AI	GATC	9 cut(s)	20, 201, 809, 973, 1060, 1078, 1192, 1311, 1483
Sau96I	GGNCC	6 cut(s)	227, 456, 1429, 1494, 1503, 1539
SbfI	CCTGCAGG	1 cut(s)	847
SchI	GAGTC	2 cut(s)	407, 1425
ScrFI	CCNGG	9 cut(s)	222, 326, 439, 1103, 1120, 1308, 1515, 1815, 1855
SdaI	CCTGCAGG	1 cut(s)	847
SduI	GDGCHC	3 cut(s)	157, 1072, 1814
SexAI	ACCWGGT	1 cut(s)	437
SfaNI	GCATC	6 cut(s)	402, 1217, 1363, 1469, 1561, 1627
SfcI	CTRYAG	3 cut(s)	161, 843, 963
SinI	GGWCC	5 cut(s)	227, 456, 1429, 1494, 1539
SmiMI	CAYNNNNRTG	3 cut(s)	210, 591, 1286
SmlI	CTYRAG	3 cut(s)	872, 1249, 1411
SmoI	CTYRAG	3 cut(s)	872, 1249, 1411
SphI	GCATGC	2 cut(s)	1384, 1388
Sse8387I	CCTGCAGG	1 cut(s)	847
SsiI	CCGC	6 cut(s)	137, 400, 673, 1402, 1467, 1586
SspMI	CTAG	2 cut(s)	92, 390
StyD4I	CCNGG	9 cut(s)	220, 324, 437, 1101, 1118, 1306, 1513, 1813, 1853
StyI	CCWWGG	5 cut(s)	452, 504, 525, 696, 1140
TaaI	ACNGT	6 cut(s)	194, 274, 343, 826, 967, 1679
TaiI	ACGT	3 cut(s)	69, 105, 1192
TaqI	TCGA	3 cut(s)	307, 1063, 1859
TatI	WGTACW	1 cut(s)	1390
TauI	GCSGC	2 cut(s)	1405, 1470
TfiI	GAWTC	4 cut(s)	491, 781, 1642, 1672
Tru1I	TTAA	9 cut(s)	99, 468, 690, 734, 873, 881, 980, 1412, 1604
Tru9I	TTAA	9 cut(s)	99, 468, 690, 734, 873, 881, 980, 1412, 1604
TscAI	CASTG	5 cut(s)	199, 488, 593, 856, 1011
TseFI	GTSAC	2 cut(s)	274, 1051
TseI	GCWGC	7 cut(s)	233, 314, 402, 887, 949, 1405, 1706
Tsp45I	GTSAC	2 cut(s)	274, 1051
TspDTI	ATGAA	7 cut(s)	17, 26, 201, 351, 597, 1029, 1733
TspRI	CASTG	5 cut(s)	199, 488, 593, 856, 1011
Vha464I	CTTAAG	2 cut(s)	872, 1411
VneI	GTGCAC	1 cut(s)	153
VpaK11BI	GGWCC	5 cut(s)	227, 456, 1429, 1494, 1539
XagI	CCTNNNNNAGG	1 cut(s)	1040
XapI	RAATTY	2 cut(s)	116, 1097
XceI	RCATGY	3 cut(s)	1291, 1384, 1388
XcmI	CCANNNNNNNNNTGG	3 cut(s)	218, 627, 1147
XmiI	GTMKAC	1 cut(s)	363
XspI	CTAG	2 cut(s)	92, 390
Zsp2I	ATGCAT	2 cut(s)	289, 1386

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.