FvH4_1g03050

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0011048
Physical Location & Seq
Reverse (-)
1726213 .. 1730417
4205 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g03050.t1

Sequence Viewer

Length: 2166 bp
ATGGACACCAACGCCGACGAAACGACGCCGTCTCGGGGCTTCTACGCGAGAGGCGCCGGAGGCAAACTCAAGAAGCCGCCGTCGCGCAAGCCGCCGACTACTCCTTACTCCCGTCCGCCGACGAACCAGGCCGAGCGGGGGAAGCGGCGCTGGCTCTCCAGCGTCGTTGATCCGGCTTATCGCCTCATCTCCGGCGGCGCCACCCGGCTGTTCACCTCTTTCTTCTCACCCGGCGCCACCCTGAGTTCCGCCAGTGCCTTACCCGCGCCGCCCAATGTGCAGCGTCACGAGGATGAACAGGACGCAGAGATTGAGCAGAATGCTGGTGGAGACGAGCGCAATGGTGATTTAAATAATTGGGTGAGTAGAACTGAAACAGGAGGTCCTAGCACAGTAGGGAATAGTTCAAATGATGATTCTGGTTTTCAAGGCCACAGTGTAGACGACAACAGAAACCTTTCTGCTGAGAGTGGGCTTTCTGAAATTGAGCAGCTACTGAAGGGGAAAAAGTTTTCTAGGGATGAAGTCAATCGCCTGATGGAAATTATTCAATCAAAGGCTGTTGAGCATCCTACCATGGGGCACGGAAAGGAAAAACTAAGCACTACTGCTGGAGGAGAAGCCAAGGGGACTGTAATTACTCATGCTGTTCCAAAGGCGTTATCTGGAGAAAATCGGGAGGATATGAGTAAAGCAATCTGGGGAACCTCCACCCCTCTACCCCAGTCAGCTAGGCGAGAGGAGATTGGCACTTCACCCTCACATATTCAGAGGCGAGACGAGATTGGCGCTTCACCTATTGAAATTGCAAAAGCATATATGGGAAGCAGAACATCAGATATTGATGATAGGGTAGTACTGCATAATAATGAGGTTGCATCAACACCATTCATTCCAGCACCTTCCCCTAAGCCATCAACATGTTGGCCTGGTTCCATGGTACAAAATCAACGCGATTATTCAACCCCACAGAGTGAAAGAGGCAGATTTGGCCTGCATAATTTTCCCAGAACCCCTTATTCAAGAACTATCTTTTCAAAATCGAAGTCCAAGTTCAGTCCATTGCAAGGTGGTGATGATAAGGCCCAAAGAACATCATCCACTCCTTTTAAGCACCTGCAAACTCCTGTATTTGGGCAGACTTCTGGGAAGCCAAAAGGTGACGCATTGGATGGTGGCTATGGATCATCAGTAGGACCAATTCGCAGGACACGCCATAAAGTAGCGACACAAACTCCCCCTAGAGGATCTCCTTATGTTCATTCATCTTTGATTGGAACTCCACGTGTGGAAAATTCCCACATCCACAAAGAATTTTTGCCTGCTGGCAAGAAGAATTTTGAACTTGGAGGAATAAGTGGCAACTCTCCGTTCCAGTCAATAGATAGAAAGTCTTCAAGCTCTCAAGTGGGTGTTCATCCACAGTCTAGTCAGTTAGCAAGGACAATTTTGGAGCACCTTGACAGAAATTCACCCACTCCTAGAGATAAGTCAGAGGAGTTGAAGCTAGCGACTGGGTGGAAGAAGCCCCCGACTTCTGATATTCCTTCTCTCAACCAGAATGGAGATGATAGCTTACCTTTAGGAGGGTCCAGTTCCGGTAAAGTCATAAATAATGATAACCAGAAAAAGCCTGCTCTGGAGAATGCTGACAAGTGGAACTCTCTGTTTAAGGTTCCACCTCCTAAGCCTACTGTAAAAGTTGCTGATGTTGTAAGCAATGGTCCTTTTGGTGATGGGAATGCTGGAAAATCTCTAGCCAAGAGCACAGAGGCTTTTCCACAGACTACCTTAACTGCTGTTGATTCGGAGGTTCTAAATCAACCGAAGAAGCTCCTCTTTCAACCTTCAGGGACTAAACGTGTATTCCCGGCTATATCTGTTGACAAGTCTACCTTCACATTTCCGGTGTCTACATCTTCTACGGTGTTTTCAGAACCACCCACACCGTCCATTATGCCAACTTTCTCACCTAGTCCTGATCGTCAGCTAAAAGATGGAGATACAGCTGTTCCTACATACAGTTTTGGATCCAAGAAGTCTGATCGCCTTGTATTTACATTCCCTTCTATCGGTGATGCAACCCAGATTGTTACTTCAGATATTAAGTTCAGCTTTGGATCAGATAAGCCAAGGCTGTCTTTCAAAGATGCCATCTGCCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

722

Amino Acids

77.81

Weight (kDa)

9.46

Isoelectric Point (pI)

49.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G20200
fragaria_vesca FvH4_1g03050 FvH4_1g03050
malus_domestica MD02G1029800.v1.1 MD15G1171200.v1.1
prunus_persica Prupe.7G245100_v2.0.a1 Prupe.7G245100_v2.0.a1
pyrus_communis pycom02g02480 pycom15g15280
rosa_chinensis RchiOBHm_Chr2g0088181
rosa_laevigata RLG00000015929
rosa_multiflora Rmu_sc0003275.1_g000068
rosa_roxburghii Rroxscaffold_2G00152850
rosa_rugosa Rorug01G0481400 Rorug01G0481500
rosa_samantha Rh2AG036600 Rh2BG035800 Rh2CG036900 Rh2DG036300
rosa_wichuraiana Rw2G002880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1125
Acc36I ACCTGC 1 cut(s) 1125
AccB1I GGYRCC 3 cut(s) 53, 197, 233
AccBSI CCGCTC 1 cut(s) 136
AccI GTMKAC 3 cut(s) 441, 1892, 1913
AccII CGCG 4 cut(s) 47, 85, 266, 954
AciI CCGC 9 cut(s) 77, 92, 116, 136, 145, 195, 249, 264, 269
AclWI GGATC 6 cut(s) 164, 1192, 1255, 2025, 2038, 2128
AcsI RAATTY 4 cut(s) 1294, 1313, 1336, 1468
AcuI CTGAAG 3 cut(s) 518, 1833, 2082
AcvI CACGTG 1 cut(s) 1286
AcyI GRCGYC 4 cut(s) 26, 54, 198, 234
AdeI CACNNNGTG 1 cut(s) 974
AfaI GTAC 2 cut(s) 858, 942
AfiI CCNNNNNNNGG 8 cut(s) 35, 138, 578, 1067, 1133, 1244, 1586, 2072
AflIII ACRYGT 3 cut(s) 920, 1285, 1861
AjnI CCWGG 2 cut(s) 126, 928
AluBI AGCT 9 cut(s) 493, 731, 1401, 1507, 1575, 1834, 1990, 2009, 2115
AluI AGCT 9 cut(s) 493, 731, 1401, 1507, 1575, 1834, 1990, 2009, 2115
Alw21I GWGCWC 2 cut(s) 1458, 1769
Alw26I GTCTC 3 cut(s) 36, 324, 771
AlwI GGATC 6 cut(s) 164, 1192, 1255, 2025, 2038, 2128
AlwNI CAGNNNCTG 1 cut(s) 496
Ama87I CYCGRG 1 cut(s) 33
AoxI GGCC 5 cut(s) 129, 430, 926, 991, 1083
ApeKI GCWGC 2 cut(s) 280, 490
ApoI RAATTY 4 cut(s) 1294, 1313, 1336, 1468
ArsI GACNNNNNNTTYG 2 cut(s) 1031, 1063
Asp700I GAANNNNTTC 3 cut(s) 457, 546, 1393
AspLEI GCGC 8 cut(s) 56, 87, 150, 200, 236, 268, 339, 791
AspS9I GGNCC 5 cut(s) 383, 1084, 1196, 1590, 1724
AsuC2I CCSGG 3 cut(s) 205, 231, 1871
AsuNHI GCTAGC 1 cut(s) 1507
AvaI CYCGRG 1 cut(s) 33
AvaII GGWCC 4 cut(s) 383, 1196, 1590, 1724
BaeGI GKGCMC 1 cut(s) 585
BaeI ACNNNNGTAYC 2 cut(s) 1995, 2028
BamHI GGATCC 1 cut(s) 2030
BanI GGYRCC 3 cut(s) 53, 197, 233
BauI CACGAG 1 cut(s) 287
BbrPI CACGTG 1 cut(s) 1286
BbsI GAAGAC 1 cut(s) 1386
Bbv12I GWGCWC 2 cut(s) 1458, 1769
BbvI GCAGC 2 cut(s) 292, 502
BccI CCATC 6 cut(s) 532, 922, 1166, 1730, 1991, 2162
BceAI ACGGC 2 cut(s) 13, 64
BciT130I CCWGG 2 cut(s) 128, 930
BcnI CCSGG 3 cut(s) 205, 231, 1871
BcoDI GTCTC 3 cut(s) 36, 324, 771
BfaI CTAG 9 cut(s) 387, 516, 732, 1242, 1428, 1482, 1508, 1757, 1974
BfoI RGCGCY 5 cut(s) 57, 151, 201, 237, 792
BfuAI ACCTGC 1 cut(s) 1125
BisI GCNGC 7 cut(s) 77, 92, 146, 196, 269, 281, 491
BlsI GCNGC 7 cut(s) 78, 93, 147, 197, 270, 282, 492
BmcAI AGTACT 1 cut(s) 858
Bme1390I CCNGG 5 cut(s) 128, 205, 231, 930, 1871
Bme18I GGWCC 4 cut(s) 383, 1196, 1590, 1724
BmeT110I CYCGRG 1 cut(s) 33
BmgT120I GGNCC 5 cut(s) 383, 1084, 1196, 1590, 1724
BmiI GGNNCC 8 cut(s) 55, 199, 235, 706, 934, 1591, 1677, 2032
BmrFI CCNGG 5 cut(s) 128, 205, 231, 930, 1871
BmrI ACTGGG 2 cut(s) 718, 1524
BmsI GCATC 4 cut(s) 577, 887, 2068, 2140
BmtI GCTAGC 1 cut(s) 1511
BmuI ACTGGG 2 cut(s) 718, 1524
BpiI GAAGAC 1 cut(s) 1386
BplI GAGNNNNNCTC 2 cut(s) 51, 83
BpmI CTGGAG 4 cut(s) 142, 633, 687, 1661
Bpu10I CCTNAGC 2 cut(s) 909, 1686
BpuEI CTTGAG 2 cut(s) 53, 1389
BpuMI CCSGG 3 cut(s) 205, 231, 1871
BsaAI YACGTR 1 cut(s) 1286
BsaHI GRCGYC 4 cut(s) 26, 54, 198, 234
BsaJI CCNNGG 4 cut(s) 576, 624, 936, 2132
BsaWI WCCGGW 2 cut(s) 1598, 1906
BsaXI ACNNNNNCTCC 2 cut(s) 1219, 1249
Bsc4I CCNNNNNNNGG 8 cut(s) 35, 138, 578, 1067, 1133, 1244, 1586, 2072
Bse1I ACTGG 5 cut(s) 252, 724, 1375, 1519, 1593
Bse3DI GCAATG 3 cut(s) 346, 1061, 1726
BseBI CCWGG 2 cut(s) 128, 930
BseDI CCNNGG 4 cut(s) 576, 624, 936, 2132
BseGI GGATG 7 cut(s) 298, 526, 568, 1097, 1177, 1302, 1417
BseLI CCNNNNNNNGG 8 cut(s) 35, 138, 578, 1067, 1133, 1244, 1586, 2072
BseMI GCAATG 3 cut(s) 346, 1061, 1726
BseMII CTCAG 2 cut(s) 233, 456
BseNI ACTGG 5 cut(s) 252, 724, 1375, 1519, 1593
BseRI GAGGAG 4 cut(s) 630, 755, 1511, 1826
BseSI GKGCMC 1 cut(s) 585
BseXI GCAGC 2 cut(s) 292, 502
BsgI GTGCAG 1 cut(s) 299
Bsh1236I CGCG 4 cut(s) 47, 85, 266, 954
BshFI GGCC 5 cut(s) 131, 432, 928, 993, 1085
BshNI GGYRCC 3 cut(s) 53, 197, 233
BsiHKAI GWGCWC 2 cut(s) 1458, 1769
BsiHKCI CYCGRG 1 cut(s) 33
BsiSI CCGG 8 cut(s) 57, 173, 192, 205, 231, 1599, 1871, 1907
BslFI GGGAC 2 cut(s) 643, 1867
BslI CCNNNNNNNGG 8 cut(s) 35, 138, 578, 1067, 1133, 1244, 1586, 2072
BsmAI GTCTC 3 cut(s) 36, 324, 771
BsmBI CGTCTC 3 cut(s) 36, 324, 771
BsmFI GGGAC 2 cut(s) 643, 1867
BsmI GAATGC 3 cut(s) 325, 1651, 1747
BsnI GGCC 5 cut(s) 131, 432, 928, 993, 1085
BsoBI CYCGRG 1 cut(s) 33
Bsp1286I GDGCHC 3 cut(s) 585, 1458, 1769
Bsp143I GATC 7 cut(s) 169, 1184, 1247, 1981, 2030, 2044, 2120
Bsp19I CCATGG 2 cut(s) 576, 936
BspACI CCGC 9 cut(s) 77, 92, 116, 136, 145, 195, 249, 264, 269
BspANI GGCC 5 cut(s) 131, 432, 928, 993, 1085
BspCNI CTCAG 2 cut(s) 234, 457
BspFNI CGCG 4 cut(s) 47, 85, 266, 954
BspLI GGNNCC 8 cut(s) 55, 199, 235, 706, 934, 1591, 1677, 2032
BspMI ACCTGC 1 cut(s) 1125
BspOI GCTAGC 1 cut(s) 1511
BspPI GGATC 6 cut(s) 164, 1192, 1255, 2025, 2038, 2128
BspT107I GGYRCC 3 cut(s) 53, 197, 233
BsrBI CCGCTC 1 cut(s) 136
BsrDI GCAATG 3 cut(s) 346, 1061, 1726
BsrI ACTGG 5 cut(s) 252, 724, 1375, 1519, 1593
BssECI CCNNGG 4 cut(s) 576, 624, 936, 2132
BssMI GATC 7 cut(s) 169, 1184, 1247, 1981, 2030, 2044, 2120
BssNI GRCGYC 4 cut(s) 26, 54, 198, 234
BssSI CACGAG 1 cut(s) 287
BssT1I CCWWGG 4 cut(s) 576, 624, 936, 2132
Bst2BI CACGAG 1 cut(s) 287
Bst2UI CCWGG 2 cut(s) 128, 930
Bst4CI ACNGT 8 cut(s) 394, 437, 634, 1425, 1696, 1927, 1950, 2024
BstACI GRCGYC 4 cut(s) 26, 54, 198, 234
BstBAI YACGTR 1 cut(s) 1286
BstC8I GCNNGC 7 cut(s) 89, 152, 995, 1323, 1327, 1509, 1635
BstDEI CTNAG 5 cut(s) 242, 465, 599, 909, 1686
BstDSI CCRYGG 2 cut(s) 576, 936
BstENI CCTNNNNNAGG 1 cut(s) 1584
BstF5I GGATG 7 cut(s) 298, 526, 568, 1097, 1177, 1302, 1417
BstFNI CGCG 4 cut(s) 47, 85, 266, 954
BstH2I RGCGCY 5 cut(s) 57, 151, 201, 237, 792
BstHHI GCGC 8 cut(s) 56, 87, 150, 200, 236, 268, 339, 791
BstKTI GATC 7 cut(s) 172, 1187, 1250, 1984, 2033, 2047, 2123
BstMAI GTCTC 3 cut(s) 36, 324, 771
BstMBI GATC 7 cut(s) 169, 1184, 1247, 1981, 2030, 2044, 2120
BstNI CCWGG 2 cut(s) 128, 930
BstNSI RCATGY 1 cut(s) 924
BstSCI CCNGG 5 cut(s) 126, 203, 229, 928, 1869
BstSLI GKGCMC 1 cut(s) 585
BstUI CGCG 4 cut(s) 47, 85, 266, 954
BstV1I GCAGC 2 cut(s) 292, 502
BstV2I GAAGAC 1 cut(s) 1386
BstX2I RGATCY 2 cut(s) 1247, 2030
BstYI RGATCY 2 cut(s) 1247, 2030
BsuRI GGCC 5 cut(s) 131, 432, 928, 993, 1085
BtgI CCRYGG 2 cut(s) 576, 936
BtsCI GGATG 7 cut(s) 298, 526, 568, 1097, 1177, 1302, 1417
BtsIMutI CAGTG 2 cut(s) 259, 442
BveI ACCTGC 1 cut(s) 1125
Cac8I GCNNGC 7 cut(s) 89, 152, 995, 1323, 1327, 1509, 1635
CaiI CAGNNNCTG 1 cut(s) 496
CfoI GCGC 8 cut(s) 56, 87, 150, 200, 236, 268, 339, 791
Cfr13I GGNCC 5 cut(s) 383, 1084, 1196, 1590, 1724
CseI GACGC 5 cut(s) 34, 151, 272, 311, 1172
Csp6I GTAC 2 cut(s) 857, 941
CviAII CATG 4 cut(s) 577, 644, 921, 937
CviQI GTAC 2 cut(s) 857, 941
DdeI CTNAG 5 cut(s) 242, 465, 599, 909, 1686
DinI GGCGCC 3 cut(s) 55, 199, 235
DpnI GATC 7 cut(s) 171, 1186, 1249, 1983, 2032, 2046, 2122
DpnII GATC 7 cut(s) 169, 1184, 1247, 1981, 2030, 2044, 2120
DraI TTTAAA 1 cut(s) 351
DraIII CACNNNGTG 1 cut(s) 974
EciI GGCGGA 2 cut(s) 105, 238
Eco130I CCWWGG 4 cut(s) 576, 624, 936, 2132
Eco47I GGWCC 4 cut(s) 383, 1196, 1590, 1724
Eco57I CTGAAG 3 cut(s) 518, 1833, 2082
Eco72I CACGTG 1 cut(s) 1286
Eco88I CYCGRG 1 cut(s) 33
EcoNI CCTNNNNNAGG 1 cut(s) 1584
EcoO109I RGGNCCY 1 cut(s) 383
EcoRII CCWGG 2 cut(s) 126, 928
EcoT14I CCWWGG 4 cut(s) 576, 624, 936, 2132
EgeI GGCGCC 3 cut(s) 55, 199, 235
EheI GGCGCC 3 cut(s) 55, 199, 235
ErhI CCWWGG 4 cut(s) 576, 624, 936, 2132
Esp3I CGTCTC 3 cut(s) 36, 324, 771
FaeI CATG 4 cut(s) 580, 647, 924, 940
FalI AAGNNNNNCTT 8 cut(s) 1823, 1855, 1880, 1912, 2099, 2131, 2125, 2157
FaqI GGGAC 2 cut(s) 643, 1867
FatI CATG 4 cut(s) 576, 643, 920, 936
FauI CCCGC 2 cut(s) 129, 271
FblI GTMKAC 3 cut(s) 441, 1892, 1913
Fnu4HI GCNGC 7 cut(s) 77, 92, 146, 196, 269, 281, 491
FokI GGATG 7 cut(s) 305, 533, 555, 1084, 1184, 1289, 1404
Fsp4HI GCNGC 7 cut(s) 77, 92, 146, 196, 269, 281, 491
FspBI CTAG 9 cut(s) 387, 516, 732, 1242, 1428, 1482, 1508, 1757, 1974
GlaI GCGC 8 cut(s) 55, 86, 149, 199, 235, 267, 338, 790
GluI GCNGC 7 cut(s) 77, 92, 146, 196, 269, 281, 491
GsuI CTGGAG 4 cut(s) 142, 633, 687, 1661
HaeII RGCGCY 5 cut(s) 57, 151, 201, 237, 792
HaeIII GGCC 5 cut(s) 131, 432, 928, 993, 1085
HapII CCGG 8 cut(s) 57, 173, 192, 205, 231, 1599, 1871, 1907
HgaI GACGC 5 cut(s) 34, 151, 272, 311, 1172
HhaI GCGC 8 cut(s) 56, 87, 150, 200, 236, 268, 339, 791
Hin1I GRCGYC 4 cut(s) 26, 54, 198, 234
Hin1II CATG 4 cut(s) 580, 647, 924, 940
Hin6I GCGC 8 cut(s) 54, 85, 148, 198, 234, 266, 337, 789
HinP1I GCGC 8 cut(s) 54, 85, 148, 198, 234, 266, 337, 789
HincII GTYRAC 1 cut(s) 1885
HindII GTYRAC 1 cut(s) 1885
HinfI GANTC 2 cut(s) 416, 1805
HpaII CCGG 8 cut(s) 57, 173, 192, 205, 231, 1599, 1871, 1907
Hpy166II GTNNAC 5 cut(s) 213, 442, 1885, 1893, 1914
Hpy188III TCNNGA 7 cut(s) 70, 287, 666, 677, 1023, 1640, 1979
Hpy8I GTNNAC 5 cut(s) 213, 442, 1885, 1893, 1914
Hpy99I CGWCG 5 cut(s) 20, 28, 85, 124, 167
HpyAV CCTTC 6 cut(s) 493, 912, 1557, 1857, 1906, 2076
HpyCH4III ACNGT 8 cut(s) 394, 437, 634, 1425, 1696, 1927, 1950, 2024
HpyCH4IV ACGT 2 cut(s) 1285, 1861
HpyCH4V TGCA 8 cut(s) 280, 809, 862, 878, 997, 1066, 1120, 2081
HpyF3I CTNAG 5 cut(s) 242, 465, 599, 909, 1686
HpySE526I ACGT 2 cut(s) 1285, 1861
Hsp92I GRCGYC 4 cut(s) 26, 54, 198, 234
Hsp92II CATG 4 cut(s) 580, 647, 924, 940
HspAI GCGC 8 cut(s) 54, 85, 148, 198, 234, 266, 337, 789
KasI GGCGCC 3 cut(s) 53, 197, 233
Kzo9I GATC 7 cut(s) 169, 1184, 1247, 1981, 2030, 2044, 2120
LmnI GCTCC 2 cut(s) 1453, 1839
Lsp1109I GCAGC 2 cut(s) 292, 502
LweI GCATC 4 cut(s) 577, 887, 2068, 2140
MaeI CTAG 9 cut(s) 387, 516, 732, 1242, 1428, 1482, 1508, 1757, 1974
MaeII ACGT 2 cut(s) 1285, 1861
MaeIII GTNAC 3 cut(s) 284, 1160, 2092
MalI GATC 7 cut(s) 171, 1186, 1249, 1983, 2032, 2046, 2122
MbiI CCGCTC 1 cut(s) 136
MboI GATC 7 cut(s) 169, 1184, 1247, 1981, 2030, 2044, 2120
MboII GAAGA 6 cut(s) 214, 1345, 1386, 1534, 1840, 1911
MflI RGATCY 2 cut(s) 1247, 2030
MhlI GDGCHC 3 cut(s) 585, 1458, 1769
Mly113I GGCGCC 3 cut(s) 54, 198, 234
MroXI GAANNNNTTC 3 cut(s) 457, 546, 1393
MseI TTAA 5 cut(s) 350, 1110, 1671, 1793, 2106
MslI CAYNNNNRTG 3 cut(s) 291, 867, 919
MspA1I CMGCKG 1 cut(s) 2009
MspI CCGG 8 cut(s) 57, 173, 192, 205, 231, 1599, 1871, 1907
MspR9I CCNGG 5 cut(s) 128, 205, 231, 930, 1871
Mva1269I GAATGC 3 cut(s) 325, 1651, 1747
MvaI CCWGG 2 cut(s) 128, 930
MvnI CGCG 4 cut(s) 47, 85, 266, 954
NarI GGCGCC 3 cut(s) 54, 198, 234
NciI CCSGG 3 cut(s) 205, 231, 1871
NcoI CCATGG 2 cut(s) 576, 936
NdeII GATC 7 cut(s) 169, 1184, 1247, 1981, 2030, 2044, 2120
NheI GCTAGC 1 cut(s) 1507
NlaIII CATG 4 cut(s) 580, 647, 924, 940
NlaIV GGNNCC 8 cut(s) 55, 199, 235, 706, 934, 1591, 1677, 2032
NmeAIII GCCGAG 1 cut(s) 157
NmuCI GTSAC 2 cut(s) 284, 1160
NspI RCATGY 1 cut(s) 924
PaqCI CACCTGC 1 cut(s) 1125
PciI ACATGT 1 cut(s) 920
PctI GAATGC 3 cut(s) 325, 1651, 1747
PdmI GAANNNNTTC 3 cut(s) 457, 546, 1393
PfeI GAWTC 2 cut(s) 416, 1805
PflFI GACNNNGTC 1 cut(s) 28
PkrI GCNGC 7 cut(s) 78, 93, 147, 197, 270, 282, 492
PluTI GGCGCC 3 cut(s) 57, 201, 237
PmaCI CACGTG 1 cut(s) 1286
PmlI CACGTG 1 cut(s) 1286
Ppu21I YACGTR 1 cut(s) 1286
PpuMI RGGWCCY 1 cut(s) 383
PscI ACATGT 1 cut(s) 920
Psp5II RGGWCCY 1 cut(s) 383
Psp6I CCWGG 2 cut(s) 126, 928
PspCI CACGTG 1 cut(s) 1286
PspGI CCWGG 2 cut(s) 126, 928
PspN4I GGNNCC 8 cut(s) 55, 199, 235, 706, 934, 1591, 1677, 2032
PspPI GGNCC 5 cut(s) 383, 1084, 1196, 1590, 1724
PspPPI RGGWCCY 1 cut(s) 383
PstNI CAGNNNCTG 1 cut(s) 496
PsuI RGATCY 2 cut(s) 1247, 2030
PsyI GACNNNGTC 1 cut(s) 28
PvuII CAGCTG 1 cut(s) 2009
RsaI GTAC 2 cut(s) 858, 942
RsaNI GTAC 2 cut(s) 857, 941
RseI CAYNNNNRTG 3 cut(s) 291, 867, 919
SaqAI TTAA 5 cut(s) 350, 1110, 1671, 1793, 2106
SatI GCNGC 7 cut(s) 77, 92, 146, 196, 269, 281, 491
Sau3AI GATC 7 cut(s) 169, 1184, 1247, 1981, 2030, 2044, 2120
Sau96I GGNCC 5 cut(s) 383, 1084, 1196, 1590, 1724
ScaI AGTACT 1 cut(s) 858
ScrFI CCNGG 5 cut(s) 128, 205, 231, 930, 1871
SduI GDGCHC 3 cut(s) 585, 1458, 1769
SfaNI GCATC 4 cut(s) 577, 887, 2068, 2140
SfoI GGCGCC 3 cut(s) 55, 199, 235
SinI GGWCC 4 cut(s) 383, 1196, 1590, 1724
SmiI ATTTAAAT 1 cut(s) 351
SmiMI CAYNNNNRTG 3 cut(s) 291, 867, 919
SmlI CTYRAG 2 cut(s) 68, 1404
SmoI CTYRAG 2 cut(s) 68, 1404
SsiI CCGC 9 cut(s) 77, 92, 116, 136, 145, 195, 249, 264, 269
SspDI GGCGCC 3 cut(s) 53, 197, 233
SspMI CTAG 9 cut(s) 387, 516, 732, 1242, 1428, 1482, 1508, 1757, 1974
StyD4I CCNGG 5 cut(s) 126, 203, 229, 928, 1869
StyI CCWWGG 4 cut(s) 576, 624, 936, 2132
SwaI ATTTAAAT 1 cut(s) 351
TaaI ACNGT 8 cut(s) 394, 437, 634, 1425, 1696, 1927, 1950, 2024
TaiI ACGT 2 cut(s) 1288, 1864
TaqI TCGA 1 cut(s) 1043
TatI WGTACW 1 cut(s) 856
TauI GCSGC 5 cut(s) 79, 94, 148, 198, 271
TfiI GAWTC 2 cut(s) 416, 1805
Tru1I TTAA 5 cut(s) 350, 1110, 1671, 1793, 2106
Tru9I TTAA 5 cut(s) 350, 1110, 1671, 1793, 2106
TscAI CASTG 2 cut(s) 259, 442
TseFI GTSAC 2 cut(s) 284, 1160
TseI GCWGC 2 cut(s) 280, 490
Tsp45I GTSAC 2 cut(s) 284, 1160
TspDTI ATGAA 6 cut(s) 309, 537, 880, 1250, 1254, 1406
TspGWI ACGGA 2 cut(s) 600, 1359
TspRI CASTG 2 cut(s) 259, 442
Tth111I GACNNNGTC 1 cut(s) 28
VpaK11BI GGWCC 4 cut(s) 383, 1196, 1590, 1724
XagI CCTNNNNNAGG 1 cut(s) 1584
XapI RAATTY 4 cut(s) 1294, 1313, 1336, 1468
XceI RCATGY 1 cut(s) 924
XcmI CCANNNNNNNNNTGG 1 cut(s) 921
XmiI GTMKAC 3 cut(s) 441, 1892, 1913
XmnI GAANNNNTTC 3 cut(s) 457, 546, 1393
XspI CTAG 9 cut(s) 387, 516, 732, 1242, 1428, 1482, 1508, 1757, 1974
ZrmI AGTACT 1 cut(s) 858
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.