pycom15g15280

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0011048
Physical Location & Seq
Reverse (-)
10633165 .. 10638341
5177 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g15280.9

Sequence Viewer

Length: 2337 bp
ATGGATAGACATGAATACATGACTTGTAATGTGAATAGACATGAACACATATACAAGCTGGACTGTTATACTCAAGCAAGTAACAATATTGTGAAAAATCAAAGGTCAGAAATTAACAAACGGTGCGTGAGAAGTAAAAAAAAAGTGTATGAATACACACCCCTAACTGAAACCGAGAAAAAAAAAAGAAACGAAGTTTCCAAGTTTCCGCTTCTCATCAGAGAGTCCACGTCGGATCCACCACAAAGTCAGTGGAAAGCACACAGAGGAGCAAGCGAGAGAGTGAGAGAGAGACGAATGGAGACCGGCGGCGAAACGGCGCGTTCCTCAGGGCTCTACGGAGAGAGAGGGGCAGGAGGGAAGCTGAGGAAGCCGCCGTCTCGAAAGCCGAGTACGACGCCATATTCCCGTCCGCCTTCGAACGAAGCTGCGCGGGGACAGCGGCGGTGGCTGTCGGGTATTGTCGATCCGGCGTATCGGCTGATATCTGGAGGCGCCACTCGGCTCTTCCCCACCTTCTTCTCCAAATCGAATTCCGTCAATGCCCTTCCCTCGCCCAATGACCAAAGTCACGATGAGCAGCACACGGAGACGGAACAAAATGCTATTGGCGATCGTGAGGACAATGCCGATGTAAATAATGGGATCTCCAGAACAACTGAAATAGTAGGCCCTTGCAAAAAAGCAGATAGATTAATAAGTGGTTCGGATTTTGAAGGGAATAAGAAGAGTGACCAGTCTGATGATATTGGACTTTCTGAAATTGAGCAGTTATTGAAGGGGAAAAAGTTTTCTAGGGATGAAGTCAATCACTTGATGGAAATTATACAGTCGAGGGCTGTTGAACCTCCTACTGTGGATCACAAAAAGAAAAACCAAAGCTTTAGTGCTGCTGAAAAAGCCAAGTGGCCTTTAATTACAAATGATATTCCAAAGTCATCTGAAGAAAAGCAGGAAGACTTGAATAAAGCTATTTGGCCGACCTCAACCCCTCTACCGCAGTCAGCTATACAAGATCAGGTTGGTGCTTCACCTGTTGAAATTGCAAGAGCATTTATGGGAAGCAGAAATTCAGAAATTGATCCTTCGTCTAAGAATGCAATGTCAAAAGATGAAAGGGCCACACTGCATGGAGATGAGTTCTCTTCAAAACCATTTCTTCTAGCACCTTCTTATAAGCCATCGGCATGCTGGCCTGGTTCTATGGTACAGGATCATCGTGATTATTCAACCCCACAGACTGAAAGAGGCAGATTTGGCCTTCATAATCTTCCTCGAACTCCTTATTCTAGAACTATCTTTTCAAAATCCAAATCCAAGCTAACTCAATTACAAGGTGGTAATGACAGAACCCCAAGAACGTTGTCTACTCCATTGAAACAATCGCAGACTCCTATATGTGGGCAGCCAAGGGGTGATAGATTGGATGGTGGCTATGGATCAGCTGGACCAGTTCGCAGGTTACGACATAAATCTGCTGCACAGAGTCCTGCCACAGGGTCTCTGTATGTTCACTCCTCTCCATTTGGGCCTTCACGGGTGGTGAACTCCAGTGCTACCAAAGGCTTCTTGCCTGCTGCCAAGAATTTTGAACTTGGAGGATTAAGTGGCAACTCCCAAATCCAATCATCAGACAGGAAGTCTTCCAGCTTTGGTGTGCCAACTGTTCATCCACAGTCTAGCCTGATTGCTAGGACAATCTTGGAGCACATTGATAGAAACCCATCCACTCCGAAAGATAAGCCAGAAGAGTTAAAGCTAGCCTTTGCATGGAAGAAAACCCCGTCTTCTGGTGTTTCTTCAGTCATCCAGAATGGGCATGATAGCTTACCACTTGGAGGGTTCAATTCTTGTAAGCTCATAAATCATGATTACCAGAAAAATTCTGCTCATGAGAATGCTGACAAGGGGAATTCTCTGTTTAAGATTCCACCTGTGGAGAACACTGTAAAAGCCACCACTGTTGCAAACAATATCCCCGCTGGCGCTTTTCCTTCAATCTCTGTTGACAAGCCTGAATCAAAATGGGCCTTTTCTTCTGGTAGTAGCTCTGGCTTCACTTTCCCTGTCTCTACATCGTCTACAGTGTTTTCTGAACTACCGACACCATCCTTTATGCCATCTTCCCTGGCAAGCAGTCAGCATCAGCCAAAAGAAGAAGGAGATGCTGTTCCTACTTACGATTTTGGATCCAAGAAGTCCGATCCCCTTGTGTTTGCATTCCCTTCAACAAGTGCAGAAGTTCAGAACGATGCTTCAGATATCAAGTTAAGTTTTGGATCAGATGAGCCAAAGTTGTCTTTCGGTTCAATAGGCAAAGATGCCATCTGCTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

779

Amino Acids

85.33

Weight (kDa)

9.3

Isoelectric Point (pI)

53.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G20200
fragaria_vesca FvH4_1g03050 FvH4_1g03050
malus_domestica MD02G1029800.v1.1 MD15G1171200.v1.1
prunus_persica Prupe.7G245100_v2.0.a1 Prupe.7G245100_v2.0.a1
pyrus_communis pycom02g02480 pycom15g15280
rosa_chinensis RchiOBHm_Chr2g0088181
rosa_laevigata RLG00000015929
rosa_multiflora Rmu_sc0003275.1_g000068
rosa_roxburghii Rroxscaffold_2G00152850
rosa_rugosa Rorug01G0481400 Rorug01G0481500
rosa_samantha Rh2AG036600 Rh2BG035800 Rh2CG036900 Rh2DG036300
rosa_wichuraiana Rw2G002880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1176
Acc36I ACCTGC 1 cut(s) 1449
AccB1I GGYRCC 1 cut(s) 494
AccI GTMKAC 2 cut(s) 1367, 2081
AccII CGCG 2 cut(s) 322, 433
AciI CCGC 9 cut(s) 209, 309, 374, 413, 433, 442, 445, 998, 1980
AclI AACGTT 1 cut(s) 1361
AcoI YGGCCR 1 cut(s) 977
AcsI RAATTY 5 cut(s) 532, 1069, 1585, 1882, 1912
AcuI CTGAAG 3 cut(s) 963, 1785, 2241
AcyI GRCGYC 2 cut(s) 398, 495
AfaI GTAC 2 cut(s) 394, 1209
AfiI CCNNNNNNNGG 5 cut(s) 1400, 1496, 1770, 1790, 1838
AhdI GACNNNNNGTC 1 cut(s) 1639
AjiI CACGTC 1 cut(s) 231
AjnI CCWGG 2 cut(s) 1195, 2127
AloI GAACNNNNNNTCC 2 cut(s) 2154, 2186
Alw21I GWGCWC 1 cut(s) 1710
Alw26I GTCTC 6 cut(s) 286, 296, 384, 584, 1506, 2074
AoxI GGCC 8 cut(s) 670, 908, 977, 1119, 1193, 1258, 1529, 2028
ApeKI GCWGC 6 cut(s) 428, 580, 890, 1405, 1478, 1577
ApoI RAATTY 5 cut(s) 532, 1069, 1585, 1882, 1912
AseI ATTAAT 1 cut(s) 695
AspLEI GCGC 4 cut(s) 322, 433, 497, 1988
AspS9I GGNCC 5 cut(s) 671, 1119, 1448, 1529, 2028
AsuHPI GGTGA 3 cut(s) 1023, 1427, 1555
AsuII TTCGAA 1 cut(s) 419
AsuNHI GCTAGC 1 cut(s) 1759
AvaII GGWCC 1 cut(s) 1448
AxyI CCTNAGG 1 cut(s) 328
BamHI GGATCC 2 cut(s) 235, 2189
BanI GGYRCC 1 cut(s) 494
BanII GRGCYC 1 cut(s) 336
BbsI GAAGAC 3 cut(s) 963, 1635, 1779
Bbv12I GWGCWC 1 cut(s) 1710
BbvCI CCTCAGC 1 cut(s) 365
BbvI GCAGC 6 cut(s) 415, 592, 877, 1417, 1465, 1564
BccI CCATC 7 cut(s) 811, 1189, 1421, 1732, 2116, 2128, 2333
BceAI ACGGC 2 cut(s) 333, 361
BciT130I CCWGG 2 cut(s) 1197, 2129
BcoDI GTCTC 6 cut(s) 286, 296, 384, 584, 1506, 2074
BfaI CTAG 6 cut(s) 795, 1163, 1290, 1680, 1692, 1760
BfmI CTRYAG 1 cut(s) 2082
BfoI RGCGCY 2 cut(s) 498, 1989
BfuAI ACCTGC 1 cut(s) 1449
BisI GCNGC 9 cut(s) 310, 374, 429, 443, 581, 891, 1406, 1479, 1578
BlsI GCNGC 9 cut(s) 311, 375, 430, 444, 582, 892, 1407, 1480, 1579
Bme1390I CCNGG 2 cut(s) 1197, 2129
Bme18I GGWCC 1 cut(s) 1448
BmeRI GACNNNNNGTC 1 cut(s) 1639
BmgBI CACGTC 1 cut(s) 231
BmgT120I GGNCC 5 cut(s) 671, 1119, 1448, 1529, 2028
BmiI GGNNCC 3 cut(s) 237, 496, 2191
BmrFI CCNGG 2 cut(s) 1197, 2129
BmsI GCATC 4 cut(s) 2152, 2155, 2242, 2311
BmtI GCTAGC 1 cut(s) 1763
BoxI GACNNNNGTC 1 cut(s) 567
BpiI GAAGAC 3 cut(s) 963, 1635, 1779
BpmI CTGGAG 3 cut(s) 510, 634, 1534
Bpu10I CCTNAGC 1 cut(s) 365
Bpu14I TTCGAA 1 cut(s) 419
BpuEI CTTGAG 1 cut(s) 57
BsaHI GRCGYC 2 cut(s) 398, 495
BsaI GGTCTC 2 cut(s) 296, 1506
BsaJI CCNNGG 2 cut(s) 1409, 2127
BsaXI ACNNNNNCTCC 2 cut(s) 2154, 2184
Bsc4I CCNNNNNNNGG 5 cut(s) 1400, 1496, 1770, 1790, 1838
Bse118I RCCGGY 1 cut(s) 305
Bse1I ACTGG 3 cut(s) 736, 1451, 1551
Bse21I CCTNAGG 1 cut(s) 328
Bse3DI GCAATG 1 cut(s) 1107
BseBI CCWGG 2 cut(s) 1197, 2129
BseDI CCNNGG 2 cut(s) 1409, 2127
BseGI GGATG 6 cut(s) 805, 1432, 1669, 1724, 1806, 2108
BseLI CCNNNNNNNGG 5 cut(s) 1400, 1496, 1770, 1790, 1838
BseMI GCAATG 1 cut(s) 1107
BseMII CTCAG 2 cut(s) 342, 356
BseNI ACTGG 3 cut(s) 736, 1451, 1551
BseRI GAGGAG 2 cut(s) 282, 1507
BseXI GCAGC 6 cut(s) 415, 592, 877, 1417, 1465, 1564
BsgI GTGCAG 2 cut(s) 1464, 2256
Bsh1236I CGCG 2 cut(s) 322, 433
Bsh1285I CGRYCG 1 cut(s) 616
BshFI GGCC 8 cut(s) 672, 910, 979, 1121, 1195, 1260, 1531, 2030
BshNI GGYRCC 1 cut(s) 494
BsiEI CGRYCG 1 cut(s) 616
BsiHKAI GWGCWC 1 cut(s) 1710
BsiSI CCGG 2 cut(s) 306, 470
BslFI GGGAC 1 cut(s) 450
BslI CCNNNNNNNGG 5 cut(s) 1400, 1496, 1770, 1790, 1838
BsmAI GTCTC 6 cut(s) 286, 296, 384, 584, 1506, 2074
BsmBI CGTCTC 3 cut(s) 286, 384, 584
BsmFI GGGAC 1 cut(s) 450
BsmI GAATGC 3 cut(s) 1102, 1903, 2219
BsnI GGCC 8 cut(s) 672, 910, 979, 1121, 1195, 1260, 1531, 2030
Bso31I GGTCTC 2 cut(s) 296, 1506
Bsp119I TTCGAA 1 cut(s) 419
Bsp1286I GDGCHC 2 cut(s) 336, 1710
BspACI CCGC 9 cut(s) 209, 309, 374, 413, 433, 442, 445, 998, 1980
BspANI GGCC 8 cut(s) 672, 910, 979, 1121, 1195, 1260, 1531, 2030
BspCNI CTCAG 2 cut(s) 341, 357
BspFNI CGCG 2 cut(s) 322, 433
BspHI TCATGA 2 cut(s) 1867, 1891
BspLI GGNNCC 3 cut(s) 237, 496, 2191
BspMI ACCTGC 1 cut(s) 1449
BspOI GCTAGC 1 cut(s) 1763
BspQI GCTCTTC 1 cut(s) 512
BspT104I TTCGAA 1 cut(s) 419
BspT107I GGYRCC 1 cut(s) 494
BspTNI GGTCTC 2 cut(s) 296, 1506
BsrDI GCAATG 1 cut(s) 1107
BsrFI RCCGGY 1 cut(s) 305
BsrI ACTGG 3 cut(s) 736, 1451, 1551
BssAI RCCGGY 1 cut(s) 305
BssECI CCNNGG 2 cut(s) 1409, 2127
BssNI GRCGYC 2 cut(s) 398, 495
BssT1I CCWWGG 1 cut(s) 1409
Bst2UI CCWGG 2 cut(s) 1197, 2129
Bst4CI ACNGT 9 cut(s) 65, 123, 831, 856, 1666, 1677, 1948, 1963, 2086
Bst6I CTCTTC 4 cut(s) 512, 722, 1150, 1743
BstACI GRCGYC 2 cut(s) 398, 495
BstBI TTCGAA 1 cut(s) 419
BstC8I GCNNGC 7 cut(s) 274, 1189, 1193, 1575, 1761, 1984, 2134
BstDEI CTNAG 3 cut(s) 328, 365, 1092
BstENI CCTNNNNNAGG 1 cut(s) 1494
BstF5I GGATG 6 cut(s) 805, 1432, 1669, 1724, 1806, 2108
BstFNI CGCG 2 cut(s) 322, 433
BstH2I RGCGCY 2 cut(s) 498, 1989
BstHHI GCGC 4 cut(s) 322, 433, 497, 1988
BstMAI GTCTC 6 cut(s) 286, 296, 384, 584, 1506, 2074
BstMCI CGRYCG 1 cut(s) 616
BstMWI GCNNNNNNNGC 5 cut(s) 370, 439, 448, 899, 1257
BstNI CCWGG 2 cut(s) 1197, 2129
BstNSI RCATGY 1 cut(s) 1191
BstPAI GACNNNNGTC 1 cut(s) 567
BstSCI CCNGG 2 cut(s) 1195, 2127
BstSFI CTRYAG 1 cut(s) 2082
BstUI CGCG 2 cut(s) 322, 433
BstV1I GCAGC 6 cut(s) 415, 592, 877, 1417, 1465, 1564
BstV2I GAAGAC 3 cut(s) 963, 1635, 1779
BstX2I RGATCY 3 cut(s) 235, 645, 2189
BstYI RGATCY 3 cut(s) 235, 645, 2189
Bsu36I CCTNAGG 1 cut(s) 328
BsuRI GGCC 8 cut(s) 672, 910, 979, 1121, 1195, 1260, 1531, 2030
BtrI CACGTC 1 cut(s) 231
BtsCI GGATG 6 cut(s) 805, 1432, 1669, 1724, 1806, 2108
BtsI GCAGTG 1 cut(s) 1124
BtsIMutI CAGTG 6 cut(s) 257, 1124, 1558, 1944, 1959, 2091
BveI ACCTGC 1 cut(s) 1449
Cac8I GCNNGC 7 cut(s) 274, 1189, 1193, 1575, 1761, 1984, 2134
CciI TCATGA 2 cut(s) 1867, 1891
CfoI GCGC 4 cut(s) 322, 433, 497, 1988
Cfr10I RCCGGY 1 cut(s) 305
Cfr13I GGNCC 5 cut(s) 671, 1119, 1448, 1529, 2028
CseI GACGC 1 cut(s) 406
Csp6I GTAC 2 cut(s) 393, 1208
CspCI CAANNNNNGTGG 4 cut(s) 233, 268, 1945, 1980
CviAII CATG 9 cut(s) 11, 19, 41, 1130, 1188, 1770, 1820, 1868, 1892
CviQI GTAC 2 cut(s) 393, 1208
DdeI CTNAG 3 cut(s) 328, 365, 1092
DinI GGCGCC 1 cut(s) 496
DriI GACNNNNNGTC 1 cut(s) 1639
EaeI YGGCCR 1 cut(s) 977
Eam1104I CTCTTC 4 cut(s) 512, 722, 1150, 1743
Eam1105I GACNNNNNGTC 1 cut(s) 1639
EarI CTCTTC 4 cut(s) 512, 722, 1150, 1743
EciI GGCGGA 1 cut(s) 402
Eco130I CCWWGG 1 cut(s) 1409
Eco24I GRGCYC 1 cut(s) 336
Eco31I GGTCTC 2 cut(s) 296, 1506
Eco32I GATATC 2 cut(s) 486, 2263
Eco47I GGWCC 1 cut(s) 1448
Eco57I CTGAAG 3 cut(s) 963, 1785, 2241
Eco81I CCTNAGG 1 cut(s) 328
EcoNI CCTNNNNNAGG 1 cut(s) 1494
EcoO109I RGGNCCY 1 cut(s) 671
EcoRI GAATTC 2 cut(s) 532, 1912
EcoRII CCWGG 2 cut(s) 1195, 2127
EcoRV GATATC 2 cut(s) 486, 2263
EcoT14I CCWWGG 1 cut(s) 1409
EcoT38I GRGCYC 1 cut(s) 336
EgeI GGCGCC 1 cut(s) 496
EheI GGCGCC 1 cut(s) 496
ErhI CCWWGG 1 cut(s) 1409
Esp3I CGTCTC 3 cut(s) 286, 384, 584
FaeI CATG 9 cut(s) 14, 22, 44, 1133, 1191, 1773, 1823, 1871, 1895
FalI AAGNNNNNCTT 2 cut(s) 1748, 1780
FaqI GGGAC 1 cut(s) 450
FatI CATG 9 cut(s) 10, 18, 40, 1129, 1187, 1769, 1819, 1867, 1891
FauI CCCGC 2 cut(s) 426, 1987
FblI GTMKAC 2 cut(s) 1367, 2081
Fnu4HI GCNGC 9 cut(s) 310, 374, 429, 443, 581, 891, 1406, 1479, 1578
FokI GGATG 6 cut(s) 812, 1439, 1656, 1711, 1793, 2095
FriOI GRGCYC 1 cut(s) 336
Fsp4HI GCNGC 9 cut(s) 310, 374, 429, 443, 581, 891, 1406, 1479, 1578
FspBI CTAG 6 cut(s) 795, 1163, 1290, 1680, 1692, 1760
GlaI GCGC 4 cut(s) 321, 432, 496, 1987
GluI GCNGC 9 cut(s) 310, 374, 429, 443, 581, 891, 1406, 1479, 1578
GsuI CTGGAG 3 cut(s) 510, 634, 1534
HaeII RGCGCY 2 cut(s) 498, 1989
HaeIII GGCC 8 cut(s) 672, 910, 979, 1121, 1195, 1260, 1531, 2030
HapII CCGG 2 cut(s) 306, 470
HgaI GACGC 1 cut(s) 406
HhaI GCGC 4 cut(s) 322, 433, 497, 1988
Hin1I GRCGYC 2 cut(s) 398, 495
Hin1II CATG 9 cut(s) 14, 22, 44, 1133, 1191, 1773, 1823, 1871, 1895
Hin6I GCGC 4 cut(s) 320, 431, 495, 1986
HinP1I GCGC 4 cut(s) 320, 431, 495, 1986
HincII GTYRAC 1 cut(s) 2008
HindII GTYRAC 1 cut(s) 2008
HindIII AAGCTT 1 cut(s) 880
HinfI GANTC 5 cut(s) 224, 1390, 1486, 1927, 2018
HpaII CCGG 2 cut(s) 306, 470
HphI GGTGA 3 cut(s) 1023, 1427, 1555
Hpy166II GTNNAC 6 cut(s) 228, 1368, 1513, 1546, 2008, 2082
Hpy8I GTNNAC 6 cut(s) 228, 1368, 1513, 1546, 2008, 2082
Hpy99I CGWCG 2 cut(s) 235, 400
HpyCH4III ACNGT 9 cut(s) 65, 123, 831, 856, 1666, 1677, 1948, 1963, 2086
HpyCH4IV ACGT 2 cut(s) 230, 1361
HpyCH4V TGCA 9 cut(s) 678, 1046, 1100, 1129, 1481, 1769, 1967, 2219, 2237
HpyF10VI GCNNNNNNNGC 5 cut(s) 370, 439, 448, 899, 1257
HpyF3I CTNAG 3 cut(s) 328, 365, 1092
HpySE526I ACGT 2 cut(s) 230, 1361
Hsp92I GRCGYC 2 cut(s) 398, 495
Hsp92II CATG 9 cut(s) 14, 22, 44, 1133, 1191, 1773, 1823, 1871, 1895
HspAI GCGC 4 cut(s) 320, 431, 495, 1986
KasI GGCGCC 1 cut(s) 494
LguI GCTCTTC 1 cut(s) 512
LmnI GCTCC 2 cut(s) 269, 1705
Lsp1109I GCAGC 6 cut(s) 415, 592, 877, 1417, 1465, 1564
LweI GCATC 4 cut(s) 2152, 2155, 2242, 2311
MaeI CTAG 6 cut(s) 795, 1163, 1290, 1680, 1692, 1760
MaeII ACGT 2 cut(s) 230, 1361
MaeIII GTNAC 4 cut(s) 80, 569, 731, 1461
MflI RGATCY 3 cut(s) 235, 645, 2189
MhlI GDGCHC 2 cut(s) 336, 1710
Mly113I GGCGCC 1 cut(s) 495
MlyI GAGTC 3 cut(s) 233, 1384, 1495
MmeI TCCRAC 1 cut(s) 213
MseI TTAA 8 cut(s) 114, 695, 914, 1604, 1754, 1923, 2270, 2335
MslI CAYNNNNRTG 3 cut(s) 1134, 1186, 1896
MspA1I CMGCKG 3 cut(s) 442, 1445, 1982
MspI CCGG 2 cut(s) 306, 470
MspR9I CCNGG 2 cut(s) 1197, 2129
Mva1269I GAATGC 3 cut(s) 1102, 1903, 2219
MvaI CCWGG 2 cut(s) 1197, 2129
MvnI CGCG 2 cut(s) 322, 433
MwoI GCNNNNNNNGC 5 cut(s) 370, 439, 448, 899, 1257
NarI GGCGCC 1 cut(s) 495
NheI GCTAGC 1 cut(s) 1759
NlaIII CATG 9 cut(s) 14, 22, 44, 1133, 1191, 1773, 1823, 1871, 1895
NlaIV GGNNCC 3 cut(s) 237, 496, 2191
NmeAIII GCCGAG 2 cut(s) 414, 481
NmuCI GTSAC 2 cut(s) 569, 731
NspI RCATGY 1 cut(s) 1191
NspV TTCGAA 1 cut(s) 419
PaeI GCATGC 1 cut(s) 1191
PagI TCATGA 2 cut(s) 1867, 1891
PciSI GCTCTTC 1 cut(s) 512
PcsI WCGNNNNNNNCGW 1 cut(s) 1462
PctI GAATGC 3 cut(s) 1102, 1903, 2219
PfeI GAWTC 2 cut(s) 1927, 2018
PkrI GCNGC 9 cut(s) 311, 375, 430, 444, 582, 892, 1407, 1480, 1579
Ple19I CGATCG 1 cut(s) 616
PleI GAGTC 3 cut(s) 232, 1384, 1494
PluTI GGCGCC 1 cut(s) 498
PpsI GAGTC 3 cut(s) 232, 1384, 1494
PshAI GACNNNNGTC 1 cut(s) 567
PshBI ATTAAT 1 cut(s) 695
PsiI TTATAA 1 cut(s) 1176
Psp1406I AACGTT 1 cut(s) 1361
Psp6I CCWGG 2 cut(s) 1195, 2127
PspGI CCWGG 2 cut(s) 1195, 2127
PspN4I GGNNCC 3 cut(s) 237, 496, 2191
PspPI GGNCC 5 cut(s) 671, 1119, 1448, 1529, 2028
PsrI GAACNNNNNNTAC 2 cut(s) 1351, 1383
PsuI RGATCY 3 cut(s) 235, 645, 2189
PvuI CGATCG 1 cut(s) 616
PvuII CAGCTG 1 cut(s) 1445
RsaI GTAC 2 cut(s) 394, 1209
RsaNI GTAC 2 cut(s) 393, 1208
RseI CAYNNNNRTG 3 cut(s) 1134, 1186, 1896
SapI GCTCTTC 1 cut(s) 512
SaqAI TTAA 8 cut(s) 114, 695, 914, 1604, 1754, 1923, 2270, 2335
SatI GCNGC 9 cut(s) 310, 374, 429, 443, 581, 891, 1406, 1479, 1578
Sau96I GGNCC 5 cut(s) 671, 1119, 1448, 1529, 2028
SchI GAGTC 3 cut(s) 233, 1384, 1495
ScrFI CCNGG 2 cut(s) 1197, 2129
SduI GDGCHC 2 cut(s) 336, 1710
SfaNI GCATC 4 cut(s) 2152, 2155, 2242, 2311
SfcI CTRYAG 1 cut(s) 2082
SfoI GGCGCC 1 cut(s) 496
SfuI TTCGAA 1 cut(s) 419
SinI GGWCC 1 cut(s) 1448
SmiMI CAYNNNNRTG 3 cut(s) 1134, 1186, 1896
SmlI CTYRAG 1 cut(s) 72
SmoI CTYRAG 1 cut(s) 72
SphI GCATGC 1 cut(s) 1191
SsiI CCGC 9 cut(s) 209, 309, 374, 413, 433, 442, 445, 998, 1980
SspDI GGCGCC 1 cut(s) 494
SspI AATATT 1 cut(s) 88
SspMI CTAG 6 cut(s) 795, 1163, 1290, 1680, 1692, 1760
StyD4I CCNGG 2 cut(s) 1195, 2127
StyI CCWWGG 1 cut(s) 1409
TaaI ACNGT 9 cut(s) 65, 123, 831, 856, 1666, 1677, 1948, 1963, 2086
TaiI ACGT 2 cut(s) 233, 1364
TaqI TCGA 6 cut(s) 382, 419, 465, 530, 833, 1276
TauI GCSGC 3 cut(s) 312, 376, 445
TfiI GAWTC 2 cut(s) 1927, 2018
Tru1I TTAA 8 cut(s) 114, 695, 914, 1604, 1754, 1923, 2270, 2335
Tru9I TTAA 8 cut(s) 114, 695, 914, 1604, 1754, 1923, 2270, 2335
TscAI CASTG 6 cut(s) 257, 1131, 1558, 1951, 1966, 2091
TseFI GTSAC 2 cut(s) 569, 731
TseI GCWGC 6 cut(s) 428, 580, 890, 1405, 1478, 1577
Tsp45I GTSAC 2 cut(s) 569, 731
TspDTI ATGAA 7 cut(s) 27, 57, 165, 816, 1128, 1253, 1658
TspGWI ACGGA 4 cut(s) 354, 526, 602, 608
TspRI CASTG 6 cut(s) 257, 1131, 1558, 1951, 1966, 2091
VpaK11BI GGWCC 1 cut(s) 1448
VspI ATTAAT 1 cut(s) 695
XagI CCTNNNNNAGG 1 cut(s) 1494
XapI RAATTY 5 cut(s) 532, 1069, 1585, 1882, 1912
XbaI TCTAGA 1 cut(s) 1289
XceI RCATGY 1 cut(s) 1191
XcmI CCANNNNNNNNNTGG 2 cut(s) 249, 1188
XmiI GTMKAC 2 cut(s) 1367, 2081
XspI CTAG 6 cut(s) 795, 1163, 1290, 1680, 1692, 1760
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.