MD15G1171200.v1.1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0011048
Physical Location & Seq
Reverse (-)
13296016 .. 13301328
5313 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1171200.v1.1.491

Sequence Viewer

Length: 2172 bp
ATGGAGACCGGCGGCGAAACGGCTCTTTCCTCAGGGCTCTACGGAGAGAGAGGGGCAGGAGGGAAGCTGAGGAAGCCGCCGTCTCGAAAGCCGAGTACGACGCCATATTCCCGTCCGCCTTCGAACGAAGCCGCGCGGGGACAGCGGCGGTGGCTGTCGGGTATTGTCGATCCGGCGTATCGGCTGATATCTGGAGGCGCCACTCGGCTCTTCCCCTCCTTCTTCTCCAAATCGAATTCCGTCAACGCCCTTCCCTCGCCCAATGACCAAAATCACGATGAGCAGCACACGGAGACGGAACAAAATGCTATTGGCGATCGTGAGGACAATGCCGATGTAAATAATGGGATCTCCAGAACAACTGAAATAGTAGGCCCTAGCAAAAAATCAGATAGATTAATAAGTTGTTCGGATTTTGAAGGGAATAAGAAGAGTGACCAGTCTGATGATATTGGACTTTCTGAAATTGAGCAGTTATTGAAGGGGAAAAAGTTTTCTAGGGATGAAGTCAATCACTTGATGGAAATTATACATTCGAGGGCTGTTGAACCTCCTACTGTGGATCACAAAAAGAAAAACCAAAGCTTTAGTACTGCTGAAAAAGCCAAGTGGCCTTTAATTACAAATGATATTCCAAAGTCATCTGAAGAAAAGCAGGAAGACTGGAATAAAGCTATTTGGCCAACCTCAACCCCTCTACCGCAGTCAGCTATACGAGATCAGGTTGGTGCTTCACCTGTTGAAATTGCAAGAGCATTTATGGGAAGCAGAAATTCAGAAATTGATCTTTCGTCAAAGAATGCAATGTCAAAAGATGAAAGGGCCACACTGCATGGCGATGAGTTCTCTTCAAAACCATTTCTTCCAACACCTTCTTATAAGCCATCGGCATGCTGGCCTGGTTCTATGGTACAGGATCAGCGTGATTATTCAACCCCACAGACTGAAAGAGGCAGATTTGGCCTTCATAATCTTCCTCGAACTCCTTATTCTAGAACTATCTTTTCAAAATCCAAATCCAAACTAACTCAATTACAAGGTGGTAATGACAGAACCCGAAGAACGTTATCTACTCCATTGAAACAATCGCAGACTCCTATATATGGGCAGCCAAGGGGTGATACATTGGATGGTGGCTATGGATCAGCTGGACCGGTTCGTAGGCTGCGACCTAAATCTGCTTCACAAAGTCCTGCCACAGGGTCTCCGTATGTTCACTCCTCTCCATTTGGGCCTTCACGGGGGGAGAACTCCAGTGCTACCAAAGGCTTCTTGCCTGCCGCCAAGAATTTTGAACTTGGAGGATTAAGTGGCAACTCCCAAATCCAATCATCAGACAGGAAGTCTTCCAGCTTTGGTGTGCCAACTGTTCATCCACAGTCTAGCCTGATTGCTAGGACAATCTTGGAGCACATTGATAGAAACCCGCCCACTCCGAAAGATAAGTCAGAAGAGTTAAAGCTAGCCTTTGCATGGAAGAAAACCCCGTCTTCTGGTGTTTCTTCAGTCATCCAGAATGGGCATGATAGCTTACCAGTTGGAGGGTTCAATTCTCGTAAGCTTATAAATCAAGATTACCAGAAAAATTCTGCTCATGAGAATGCTGACAAGGGGAATTCTCTGTTTAAGATTCCACCTGTGGAGAACACTGTAAAAGCCACCACTGTTGCAAACAATATCCCCGCTGGTGATGGGAGGGATGGAAGATCCTTAAGCAAGAGTACAAATGAGGATTTTCTGAAGATTGCTCCAAATGTTGTTGGCTCTGGGGTGCTAAATCAGCAAAACAAGCCTGCATTTCAATCTTTAGAGGCTAAACGCGCGTTTCCTTCTATCTCTGTTGACAAGCCTGAATCAAAATGGGCCTTTTCTTCTGGTAGCAGCTCTGGCTTCACTTTCCCTGTCTCTACATCGTCTGCAGTGTTTTCTGAACTACCGACACCATCCTTTATGCCATCTTCCCTGGCAAGCAGTCAGCATCAGCCAAAAGAAGAAGGAGATGCTGTTCCTACTTACGATTTTGGATCCAAGAAGTCCGATCCCCTTGTATTTGCATTCCCTTCTACAAGTGCGGAAGTTCAGAACGATGCTTCAGATATCAAGTTCAGTTTTGGATCAGATAAGCCAAAGTTGTCTTTCGGTTCAATAGGCAAAGATGCCATCTGCTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

724

Amino Acids

78.34

Weight (kDa)

9.25

Isoelectric Point (pI)

51.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G20200
fragaria_vesca FvH4_1g03050 FvH4_1g03050
malus_domestica MD02G1029800.v1.1 MD15G1171200.v1.1
prunus_persica Prupe.7G245100_v2.0.a1 Prupe.7G245100_v2.0.a1
pyrus_communis pycom02g02480 pycom15g15280
rosa_chinensis RchiOBHm_Chr2g0088181
rosa_laevigata RLG00000015929
rosa_multiflora Rmu_sc0003275.1_g000068
rosa_roxburghii Rroxscaffold_2G00152850
rosa_rugosa Rorug01G0481400 Rorug01G0481500
rosa_samantha Rh2AG036600 Rh2BG035800 Rh2CG036900 Rh2DG036300
rosa_wichuraiana Rw2G002880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 879, 1565
AccB1I GGYRCC 1 cut(s) 197
AccII CGCG 4 cut(s) 134, 136, 1821, 1823
AclI AACGTT 1 cut(s) 1064
AcoI YGGCCR 1 cut(s) 680
AcsI RAATTY 5 cut(s) 235, 772, 1288, 1585, 1615
AcuI CTGAAG 4 cut(s) 666, 1488, 1760, 2076
AcyI GRCGYC 2 cut(s) 101, 198
AfaI GTAC 4 cut(s) 97, 592, 912, 1723
AfiI CCNNNNNNNGG 6 cut(s) 1103, 1199, 1241, 1473, 1493, 1541
AflII CTTAAG 1 cut(s) 1711
AgeI ACCGGT 1 cut(s) 1153
AhdI GACNNNNNGTC 1 cut(s) 1342
AjnI CCWGG 2 cut(s) 898, 1962
AloI GAACNNNNNNTCC 2 cut(s) 1989, 2021
Alw21I GWGCWC 1 cut(s) 1413
Alw26I GTCTC 4 cut(s) 87, 287, 1209, 1909
AoxI GGCC 8 cut(s) 373, 611, 680, 822, 896, 961, 1232, 1863
ApeKI GCWGC 4 cut(s) 283, 1108, 1165, 1881
ApoI RAATTY 5 cut(s) 235, 772, 1288, 1585, 1615
ArsI GACNNNNNNTTYG 2 cut(s) 1430, 1462
AseI ATTAAT 1 cut(s) 398
AsiGI ACCGGT 1 cut(s) 1153
AspLEI GCGC 3 cut(s) 136, 200, 1823
AspS9I GGNCC 5 cut(s) 374, 822, 1151, 1232, 1863
AsuHPI GGTGA 3 cut(s) 726, 1130, 1700
AsuII TTCGAA 1 cut(s) 122
AsuNHI GCTAGC 1 cut(s) 1462
AvaII GGWCC 1 cut(s) 1151
AxyI CCTNAGG 1 cut(s) 31
BalI TGGCCA 1 cut(s) 682
BamHI GGATCC 1 cut(s) 2024
BanI GGYRCC 1 cut(s) 197
BanII GRGCYC 1 cut(s) 39
BbsI GAAGAC 3 cut(s) 666, 1338, 1482
Bbv12I GWGCWC 1 cut(s) 1413
BbvCI CCTCAGC 1 cut(s) 68
BbvI GCAGC 4 cut(s) 295, 1120, 1152, 1893
BccI CCATC 8 cut(s) 514, 892, 1124, 1685, 1694, 1951, 1963, 2168
BceAI ACGGC 2 cut(s) 36, 64
BciT130I CCWGG 2 cut(s) 900, 1964
BcoDI GTCTC 4 cut(s) 87, 287, 1209, 1909
BfaI CTAG 6 cut(s) 378, 498, 993, 1383, 1395, 1463
BfmI CTRYAG 1 cut(s) 1917
BfoI RGCGCY 1 cut(s) 201
BfrI CTTAAG 1 cut(s) 1711
BisI GCNGC 9 cut(s) 13, 77, 132, 146, 284, 1109, 1166, 1281, 1882
BlsI GCNGC 9 cut(s) 14, 78, 133, 147, 285, 1110, 1167, 1282, 1883
BmcAI AGTACT 1 cut(s) 592
Bme1390I CCNGG 2 cut(s) 900, 1964
Bme18I GGWCC 1 cut(s) 1151
BmeRI GACNNNNNGTC 1 cut(s) 1342
BmgT120I GGNCC 5 cut(s) 374, 822, 1151, 1232, 1863
BmiI GGNNCC 2 cut(s) 199, 2026
BmrFI CCNGG 2 cut(s) 900, 1964
BmsI GCATC 4 cut(s) 1987, 1990, 2077, 2146
BmtI GCTAGC 1 cut(s) 1466
BpiI GAAGAC 3 cut(s) 666, 1338, 1482
BpmI CTGGAG 3 cut(s) 213, 337, 1237
Bpu10I CCTNAGC 1 cut(s) 68
Bpu14I TTCGAA 1 cut(s) 122
BsaHI GRCGYC 2 cut(s) 101, 198
BsaI GGTCTC 1 cut(s) 1209
BsaJI CCNNGG 2 cut(s) 1112, 1962
BsaWI WCCGGW 1 cut(s) 1153
BsaXI ACNNNNNCTCC 4 cut(s) 1189, 1219, 1989, 2019
Bsc4I CCNNNNNNNGG 6 cut(s) 1103, 1199, 1241, 1473, 1493, 1541
Bse118I RCCGGY 2 cut(s) 8, 1153
Bse1I ACTGG 4 cut(s) 439, 668, 1254, 1535
Bse21I CCTNAGG 1 cut(s) 31
Bse3DI GCAATG 1 cut(s) 810
BseBI CCWGG 2 cut(s) 900, 1964
BseDI CCNNGG 2 cut(s) 1112, 1962
BseGI GGATG 6 cut(s) 508, 1135, 1372, 1509, 1705, 1943
BseLI CCNNNNNNNGG 6 cut(s) 1103, 1199, 1241, 1473, 1493, 1541
BseMI GCAATG 1 cut(s) 810
BseMII CTCAG 2 cut(s) 45, 59
BseNI ACTGG 4 cut(s) 439, 668, 1254, 1535
BseRI GAGGAG 1 cut(s) 1210
BseXI GCAGC 4 cut(s) 295, 1120, 1152, 1893
Bsh1236I CGCG 4 cut(s) 134, 136, 1821, 1823
Bsh1285I CGRYCG 1 cut(s) 319
BshFI GGCC 8 cut(s) 375, 613, 682, 824, 898, 963, 1234, 1865
BshNI GGYRCC 1 cut(s) 197
BshTI ACCGGT 1 cut(s) 1153
BsiEI CGRYCG 1 cut(s) 319
BsiHKAI GWGCWC 1 cut(s) 1413
BsiSI CCGG 3 cut(s) 9, 173, 1154
BslFI GGGAC 1 cut(s) 153
BslI CCNNNNNNNGG 6 cut(s) 1103, 1199, 1241, 1473, 1493, 1541
BsmAI GTCTC 4 cut(s) 87, 287, 1209, 1909
BsmBI CGTCTC 2 cut(s) 87, 287
BsmFI GGGAC 1 cut(s) 153
BsmI GAATGC 3 cut(s) 805, 1606, 2054
BsnI GGCC 8 cut(s) 375, 613, 682, 824, 898, 963, 1234, 1865
Bso31I GGTCTC 1 cut(s) 1209
Bsp119I TTCGAA 1 cut(s) 122
Bsp1286I GDGCHC 2 cut(s) 39, 1413
BspANI GGCC 8 cut(s) 375, 613, 682, 824, 898, 963, 1234, 1865
BspCNI CTCAG 2 cut(s) 44, 60
BspFNI CGCG 4 cut(s) 134, 136, 1821, 1823
BspHI TCATGA 1 cut(s) 1594
BspLI GGNNCC 2 cut(s) 199, 2026
BspMAI CTGCAG 1 cut(s) 1921
BspOI GCTAGC 1 cut(s) 1466
BspQI GCTCTTC 1 cut(s) 215
BspT104I TTCGAA 1 cut(s) 122
BspT107I GGYRCC 1 cut(s) 197
BspTI CTTAAG 1 cut(s) 1711
BspTNI GGTCTC 1 cut(s) 1209
BsrDI GCAATG 1 cut(s) 810
BsrFI RCCGGY 2 cut(s) 8, 1153
BsrI ACTGG 4 cut(s) 439, 668, 1254, 1535
BssAI RCCGGY 2 cut(s) 8, 1153
BssECI CCNNGG 2 cut(s) 1112, 1962
BssNI GRCGYC 2 cut(s) 101, 198
BssT1I CCWWGG 1 cut(s) 1112
Bst2UI CCWGG 2 cut(s) 900, 1964
Bst4CI ACNGT 5 cut(s) 559, 1369, 1380, 1651, 1666
Bst6I CTCTTC 4 cut(s) 215, 425, 853, 1446
BstACI GRCGYC 2 cut(s) 101, 198
BstAFI CTTAAG 1 cut(s) 1711
BstBI TTCGAA 1 cut(s) 122
BstC8I GCNNGC 6 cut(s) 892, 896, 1278, 1464, 1794, 1969
BstDEI CTNAG 2 cut(s) 31, 68
BstENI CCTNNNNNAGG 1 cut(s) 1197
BstF5I GGATG 6 cut(s) 508, 1135, 1372, 1509, 1705, 1943
BstFNI CGCG 4 cut(s) 134, 136, 1821, 1823
BstH2I RGCGCY 1 cut(s) 201
BstHHI GCGC 3 cut(s) 136, 200, 1823
BstMAI GTCTC 4 cut(s) 87, 287, 1209, 1909
BstMCI CGRYCG 1 cut(s) 319
BstMWI GCNNNNNNNGC 9 cut(s) 73, 142, 151, 602, 960, 1780, 1789, 1820, 1887
BstNI CCWGG 2 cut(s) 900, 1964
BstNSI RCATGY 1 cut(s) 894
BstSCI CCNGG 2 cut(s) 898, 1962
BstSFI CTRYAG 1 cut(s) 1917
BstUI CGCG 4 cut(s) 134, 136, 1821, 1823
BstV1I GCAGC 4 cut(s) 295, 1120, 1152, 1893
BstV2I GAAGAC 3 cut(s) 666, 1338, 1482
BstX2I RGATCY 3 cut(s) 348, 1706, 2024
BstYI RGATCY 3 cut(s) 348, 1706, 2024
Bsu36I CCTNAGG 1 cut(s) 31
BsuRI GGCC 8 cut(s) 375, 613, 682, 824, 898, 963, 1234, 1865
BtgZI GCGATG 1 cut(s) 852
BtsCI GGATG 6 cut(s) 508, 1135, 1372, 1509, 1705, 1943
BtsI GCAGTG 2 cut(s) 827, 1926
BtsIMutI CAGTG 5 cut(s) 827, 1261, 1647, 1662, 1926
Cac8I GCNNGC 6 cut(s) 892, 896, 1278, 1464, 1794, 1969
CciI TCATGA 1 cut(s) 1594
CfoI GCGC 3 cut(s) 136, 200, 1823
Cfr10I RCCGGY 2 cut(s) 8, 1153
Cfr13I GGNCC 5 cut(s) 374, 822, 1151, 1232, 1863
CseI GACGC 1 cut(s) 109
Csp6I GTAC 4 cut(s) 96, 591, 911, 1722
CspAI ACCGGT 1 cut(s) 1153
CspCI CAANNNNNGTGG 2 cut(s) 1648, 1683
CviAII CATG 5 cut(s) 833, 891, 1473, 1523, 1595
CviQI GTAC 4 cut(s) 96, 591, 911, 1722
DdeI CTNAG 2 cut(s) 31, 68
DinI GGCGCC 1 cut(s) 199
DriI GACNNNNNGTC 1 cut(s) 1342
EaeI YGGCCR 1 cut(s) 680
Eam1104I CTCTTC 4 cut(s) 215, 425, 853, 1446
Eam1105I GACNNNNNGTC 1 cut(s) 1342
EarI CTCTTC 4 cut(s) 215, 425, 853, 1446
EciI GGCGGA 1 cut(s) 105
Eco130I CCWWGG 1 cut(s) 1112
Eco24I GRGCYC 1 cut(s) 39
Eco31I GGTCTC 1 cut(s) 1209
Eco32I GATATC 2 cut(s) 189, 2098
Eco47I GGWCC 1 cut(s) 1151
Eco57I CTGAAG 4 cut(s) 666, 1488, 1760, 2076
Eco81I CCTNAGG 1 cut(s) 31
EcoNI CCTNNNNNAGG 1 cut(s) 1197
EcoO109I RGGNCCY 1 cut(s) 374
EcoRI GAATTC 2 cut(s) 235, 1615
EcoRII CCWGG 2 cut(s) 898, 1962
EcoRV GATATC 2 cut(s) 189, 2098
EcoT14I CCWWGG 1 cut(s) 1112
EcoT38I GRGCYC 1 cut(s) 39
EgeI GGCGCC 1 cut(s) 199
EheI GGCGCC 1 cut(s) 199
ErhI CCWWGG 1 cut(s) 1112
Esp3I CGTCTC 2 cut(s) 87, 287
FaeI CATG 5 cut(s) 836, 894, 1476, 1526, 1598
FalI AAGNNNNNCTT 2 cut(s) 1451, 1483
FaqI GGGAC 1 cut(s) 153
FatI CATG 5 cut(s) 832, 890, 1472, 1522, 1594
FauI CCCGC 3 cut(s) 129, 1434, 1690
Fnu4HI GCNGC 9 cut(s) 13, 77, 132, 146, 284, 1109, 1166, 1281, 1882
FokI GGATG 6 cut(s) 515, 1142, 1359, 1496, 1712, 1930
FriOI GRGCYC 1 cut(s) 39
Fsp4HI GCNGC 9 cut(s) 13, 77, 132, 146, 284, 1109, 1166, 1281, 1882
FspBI CTAG 6 cut(s) 378, 498, 993, 1383, 1395, 1463
GlaI GCGC 3 cut(s) 135, 199, 1822
GluI GCNGC 9 cut(s) 13, 77, 132, 146, 284, 1109, 1166, 1281, 1882
GsuI CTGGAG 3 cut(s) 213, 337, 1237
HaeII RGCGCY 1 cut(s) 201
HaeIII GGCC 8 cut(s) 375, 613, 682, 824, 898, 963, 1234, 1865
HapII CCGG 3 cut(s) 9, 173, 1154
HgaI GACGC 1 cut(s) 109
HhaI GCGC 3 cut(s) 136, 200, 1823
Hin1I GRCGYC 2 cut(s) 101, 198
Hin1II CATG 5 cut(s) 836, 894, 1476, 1526, 1598
Hin6I GCGC 3 cut(s) 134, 198, 1821
HinP1I GCGC 3 cut(s) 134, 198, 1821
HincII GTYRAC 2 cut(s) 244, 1843
HindII GTYRAC 2 cut(s) 244, 1843
HindIII AAGCTT 2 cut(s) 583, 1559
HinfI GANTC 3 cut(s) 1093, 1630, 1853
HpaII CCGG 3 cut(s) 9, 173, 1154
HphI GGTGA 3 cut(s) 726, 1130, 1700
Hpy166II GTNNAC 3 cut(s) 244, 1216, 1843
Hpy188III TCNNGA 9 cut(s) 84, 192, 275, 320, 354, 993, 1513, 1571, 1595
Hpy8I GTNNAC 3 cut(s) 244, 1216, 1843
Hpy99I CGWCG 1 cut(s) 103
HpyCH4III ACNGT 5 cut(s) 559, 1369, 1380, 1651, 1666
HpyCH4IV ACGT 1 cut(s) 1064
HpyCH4V TGCA 8 cut(s) 749, 803, 832, 1472, 1670, 1796, 1919, 2054
HpyF10VI GCNNNNNNNGC 9 cut(s) 73, 142, 151, 602, 960, 1780, 1789, 1820, 1887
HpyF3I CTNAG 2 cut(s) 31, 68
HpySE526I ACGT 1 cut(s) 1064
Hsp92I GRCGYC 2 cut(s) 101, 198
Hsp92II CATG 5 cut(s) 836, 894, 1476, 1526, 1598
HspAI GCGC 3 cut(s) 134, 198, 1821
KasI GGCGCC 1 cut(s) 197
LguI GCTCTTC 1 cut(s) 215
LmnI GCTCC 2 cut(s) 1408, 1753
Lsp1109I GCAGC 4 cut(s) 295, 1120, 1152, 1893
LweI GCATC 4 cut(s) 1987, 1990, 2077, 2146
MaeI CTAG 6 cut(s) 378, 498, 993, 1383, 1395, 1463
MaeII ACGT 1 cut(s) 1064
MaeIII GTNAC 1 cut(s) 434
MflI RGATCY 3 cut(s) 348, 1706, 2024
MhlI GDGCHC 2 cut(s) 39, 1413
MlsI TGGCCA 1 cut(s) 682
MluNI TGGCCA 1 cut(s) 682
Mly113I GGCGCC 1 cut(s) 198
MlyI GAGTC 1 cut(s) 1087
MmeI TCCRAC 2 cut(s) 890, 1519
Mox20I TGGCCA 1 cut(s) 682
MscI TGGCCA 1 cut(s) 682
MseI TTAA 7 cut(s) 398, 617, 1307, 1457, 1626, 1712, 2170
MslI CAYNNNNRTG 3 cut(s) 837, 889, 1599
Msp20I TGGCCA 1 cut(s) 682
MspA1I CMGCKG 3 cut(s) 145, 1148, 1685
MspCI CTTAAG 1 cut(s) 1711
MspI CCGG 3 cut(s) 9, 173, 1154
MspR9I CCNGG 2 cut(s) 900, 1964
Mva1269I GAATGC 3 cut(s) 805, 1606, 2054
MvaI CCWGG 2 cut(s) 900, 1964
MvnI CGCG 4 cut(s) 134, 136, 1821, 1823
MwoI GCNNNNNNNGC 9 cut(s) 73, 142, 151, 602, 960, 1780, 1789, 1820, 1887
NarI GGCGCC 1 cut(s) 198
NheI GCTAGC 1 cut(s) 1462
NlaIII CATG 5 cut(s) 836, 894, 1476, 1526, 1598
NlaIV GGNNCC 2 cut(s) 199, 2026
NmeAIII GCCGAG 2 cut(s) 117, 184
NmuCI GTSAC 1 cut(s) 434
NspI RCATGY 1 cut(s) 894
NspV TTCGAA 1 cut(s) 122
PaeI GCATGC 1 cut(s) 894
PagI TCATGA 1 cut(s) 1594
PciSI GCTCTTC 1 cut(s) 215
PcsI WCGNNNNNNNCGW 1 cut(s) 1165
PctI GAATGC 3 cut(s) 805, 1606, 2054
PfeI GAWTC 2 cut(s) 1630, 1853
PinAI ACCGGT 1 cut(s) 1153
PkrI GCNGC 9 cut(s) 14, 78, 133, 147, 285, 1110, 1167, 1282, 1883
Ple19I CGATCG 1 cut(s) 319
PleI GAGTC 1 cut(s) 1087
PluTI GGCGCC 1 cut(s) 201
PpsI GAGTC 1 cut(s) 1087
PshBI ATTAAT 1 cut(s) 398
PsiI TTATAA 2 cut(s) 879, 1565
Psp1406I AACGTT 1 cut(s) 1064
Psp6I CCWGG 2 cut(s) 898, 1962
PspGI CCWGG 2 cut(s) 898, 1962
PspN4I GGNNCC 2 cut(s) 199, 2026
PspPI GGNCC 5 cut(s) 374, 822, 1151, 1232, 1863
PsrI GAACNNNNNNTAC 2 cut(s) 1054, 1086
PstI CTGCAG 1 cut(s) 1921
PsuI RGATCY 3 cut(s) 348, 1706, 2024
PvuI CGATCG 1 cut(s) 319
PvuII CAGCTG 1 cut(s) 1148
RsaI GTAC 4 cut(s) 97, 592, 912, 1723
RsaNI GTAC 4 cut(s) 96, 591, 911, 1722
RseI CAYNNNNRTG 3 cut(s) 837, 889, 1599
SapI GCTCTTC 1 cut(s) 215
SaqAI TTAA 7 cut(s) 398, 617, 1307, 1457, 1626, 1712, 2170
SatI GCNGC 9 cut(s) 13, 77, 132, 146, 284, 1109, 1166, 1281, 1882
Sau96I GGNCC 5 cut(s) 374, 822, 1151, 1232, 1863
ScaI AGTACT 1 cut(s) 592
SchI GAGTC 1 cut(s) 1087
ScrFI CCNGG 2 cut(s) 900, 1964
SduI GDGCHC 2 cut(s) 39, 1413
SfaNI GCATC 4 cut(s) 1987, 1990, 2077, 2146
SfcI CTRYAG 1 cut(s) 1917
SfoI GGCGCC 1 cut(s) 199
SfuI TTCGAA 1 cut(s) 122
SinI GGWCC 1 cut(s) 1151
SmiMI CAYNNNNRTG 3 cut(s) 837, 889, 1599
SmlI CTYRAG 1 cut(s) 1711
SmoI CTYRAG 1 cut(s) 1711
SphI GCATGC 1 cut(s) 894
SspDI GGCGCC 1 cut(s) 197
SspMI CTAG 6 cut(s) 378, 498, 993, 1383, 1395, 1463
StyD4I CCNGG 2 cut(s) 898, 1962
StyI CCWWGG 1 cut(s) 1112
TaaI ACNGT 5 cut(s) 559, 1369, 1380, 1651, 1666
TaiI ACGT 1 cut(s) 1067
TaqI TCGA 6 cut(s) 85, 122, 168, 233, 536, 979
TatI WGTACW 2 cut(s) 590, 1721
TauI GCSGC 5 cut(s) 15, 79, 134, 148, 1283
TfiI GAWTC 2 cut(s) 1630, 1853
Tru1I TTAA 7 cut(s) 398, 617, 1307, 1457, 1626, 1712, 2170
Tru9I TTAA 7 cut(s) 398, 617, 1307, 1457, 1626, 1712, 2170
TscAI CASTG 5 cut(s) 834, 1261, 1654, 1669, 1926
TseFI GTSAC 1 cut(s) 434
TseI GCWGC 4 cut(s) 283, 1108, 1165, 1881
Tsp45I GTSAC 1 cut(s) 434
TspDTI ATGAA 4 cut(s) 519, 831, 956, 1361
TspGWI ACGGA 5 cut(s) 57, 229, 305, 311, 1197
TspRI CASTG 5 cut(s) 834, 1261, 1654, 1669, 1926
Vha464I CTTAAG 1 cut(s) 1711
VpaK11BI GGWCC 1 cut(s) 1151
VspI ATTAAT 1 cut(s) 398
XagI CCTNNNNNAGG 1 cut(s) 1197
XapI RAATTY 5 cut(s) 235, 772, 1288, 1585, 1615
XbaI TCTAGA 1 cut(s) 992
XceI RCATGY 1 cut(s) 894
XcmI CCANNNNNNNNNTGG 1 cut(s) 891
XspI CTAG 6 cut(s) 378, 498, 993, 1383, 1395, 1463
ZrmI AGTACT 1 cut(s) 592
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.