RLG00000015929

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0011048
Physical Location & Seq
Reverse (-)
2539799 .. 2543335
3537 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000015929

Sequence Viewer

Length: 2136 bp
ATGGACGACGAAACGACACCGTCCAGGGGCTTCTACGCCTCGAGAGGCGCAGGAGGCAAACTGAAGAAGCCGCCGGCCCGCAAGCCGCCGACGACTCCTTACGCCCGCCCGCCTCCGAACCCAGCCGAGCGAGGCAAGCGGCGGTGGCTGTCCAGCGTCGTTGATCCGGCTTATCGGCTCATCTCCGGCGGCGCCACTCGGCTTTTCACCTCCTTCTTCTCGCCGGCGAATACCGTTAATGCCCTTCCCGCGCCTAATCACGATGAACGGGAGCCGGAGATTGAACAGAATGCTACTGGTGACGAGCACAATGATGATTCAAATAATTGGGTGACCAGAACTGAAACAGCAGGTCCTAGCAGGCCAGGAAATAGTTCAAACGATAGTTCTGGTTTTCAAGGCCACACTTTAGATGACAACAGCAACCTGTCTGATGTGAGTGGACTTTCTCAAATTGAGCAGCTACTGAAGGGGAAAAAGTTTTCTAGGGACGAAGTCAATCGCCTTATGGATATTATTCAATCAAAGGCTGTTGAGCATCCTCCTGTGGGGCACGAAAAGGTAAAAAAGGGCATTACTGCTGGAGGAGAAGCCAAGGGGCCTGTAAATGCCCATGCTGTTCCAAAGGTGTCATCTGGAGAAATTCAGGAAGACATGAGTAAAGCTATTTGGAGAACATCAACCCCTCTTCCCCTGTCAGCTAGGCGAGAGGAGGTTGGCGCTTCACCTATTGAAATTGCAAAAGCATATATGGGAAGCAGAACATCGGATATTGATGATGGGGCAGCAATGCATAGTAATGATATTGAATCAACACCATTCATTCCAGCATCTTCCCCTAAGCCATCAACATGTTGGCCTGGTTCCATGGTACAAAACCAACGCGATTATTCAACCCCACAGAGTGAAAGAGGCAGATTTGGCCTTCATAATTTTCCCAGAACCCCTTATTCTAGAACTATCTTTTCAAAATCCAAGTCCAAGTTTACTCCATTACAAGGTGGTGATGATAAGTCCCAAAGAACATCATCAACTCCTTTTAAGCACTTGCAAACTCCTGTATACGGGCAGACATTTGGGAAGCCAAGAGATGATGCATTGGATGGTGGCTATGGATCATCAGTAGGACCAATTCGCAGGACACGCCATAAAGTTGCTACACAAACTCCTCCTCGAGGATCTCCTTATGTTCATTCATCTTCAATTGGAACTCCACAGGTGGAAAATTCCCACATCCGCAAAGAATTTTTGCCTGCTGGCCGGAAGAATTTTGAACTTGGAGGATTAAGTGGCAACTCCCCGTTCCAGTCAATAGATAGAAAGCCTTCCAGCTCTCAAGTTGGTGTTCATCCACAGTCTAGTCAGATTGCAAGGACAATTTTGGAGCACATCAATAGAAATTCACCCACTCCTAAAGATAAGTCAGAAGAGTTGAAGCTAGCCATTGCGTGGAAGAAACCCCCGACTTCTGATATTCCTTCACTCAACCAGAATGGAGATAATAGCTCACTTCTAGGATGGTCTAGCTCCTGTAAAGTCATAATTAATGATAACCAGAAAAAGCCTGCTCTTGAGAACGCTGACAAGTGGAACTCTCTGTTTAAGGTTCCACCTCCAAAGCCTAGTGTAAAAGCTGCTGATGTTGTAAGCAATGGTCCTGCAGGTGGTGGGAGTGGTGGAAGATCTCTAGCCAAGAGCACAGAGGAGGCTTTTCCACGGACTACTTTAAATGTTGTTGGTTTGGAGGTACTAAATCAACAGAAGAAGCCTCTCTTTCAACCTTCAGGGACTAAACGCGTTTTTCCTGCTATATCTGTTGACAAGCCCGCGTCCACATGGAAGTTTTCTTCTGATAAGAGCTCTACCTTCACATTCCCAGTTTCTACATCTTCCGCTGTGTTTTCTGAACCACCCACACCGTCCATTATGCCATCTGTGTCAACTAGCACTGAGCATCAGCTGAAAGATGGAGATGCTGCAGTTCCTACATACAGTTTCGGATCCGAGAAGTCTGATCGCCTTGTGTTTACATTCCCTTCTACCAGTGATGCGATCCAGATTGGTAATTCAGATATTAAGTTCAGCTTTGGATCAGATAAGCCAAGGTTGTCATTCAAAGATGCCGTCTGCCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

712

Amino Acids

76.85

Weight (kDa)

9.46

Isoelectric Point (pI)

52.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G20200
fragaria_vesca FvH4_1g03050 FvH4_1g03050
malus_domestica MD02G1029800.v1.1 MD15G1171200.v1.1
prunus_persica Prupe.7G245100_v2.0.a1 Prupe.7G245100_v2.0.a1
pyrus_communis pycom02g02480 pycom15g15280
rosa_chinensis RchiOBHm_Chr2g0088181
rosa_laevigata RLG00000015929
rosa_multiflora Rmu_sc0003275.1_g000068
rosa_roxburghii Rroxscaffold_2G00152850
rosa_rugosa Rorug01G0481400 Rorug01G0481500
rosa_samantha Rh2AG036600 Rh2BG035800 Rh2CG036900 Rh2DG036300
rosa_wichuraiana Rw2G002880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1652
AbsI CCTCGAGG 1 cut(s) 1173
Acc36I ACCTGC 2 cut(s) 341, 1652
AccB1I GGYRCC 1 cut(s) 191
AccB7I CCANNNNNTGG 1 cut(s) 1449
AccI GTMKAC 1 cut(s) 1062
AccII CGCG 4 cut(s) 251, 885, 1797, 1829
AclWI GGATC 7 cut(s) 158, 1123, 1186, 1995, 2008, 2047, 2098
AcoI YGGCCR 1 cut(s) 1258
AcsI RAATTY 5 cut(s) 642, 1225, 1244, 1267, 1399
AcuI CTGAAG 3 cut(s) 83, 488, 1767
AcyI GRCGYC 1 cut(s) 192
AdeI CACNNNGTG 1 cut(s) 905
AfaI GTAC 2 cut(s) 873, 1749
AfiI CCNNNNNNNGG 7 cut(s) 26, 548, 998, 1064, 1175, 1449, 1664
AflIII ACRYGT 2 cut(s) 851, 1795
AjnI CCWGG 3 cut(s) 23, 364, 859
Alw21I GWGCWC 4 cut(s) 309, 1389, 1700, 1862
AlwI GGATC 7 cut(s) 158, 1123, 1186, 1995, 2008, 2047, 2098
AlwNI CAGNNNCTG 1 cut(s) 466
Ama87I CYCGRG 2 cut(s) 40, 1173
AoxI GGCC 7 cut(s) 75, 362, 400, 599, 857, 922, 1258
ApeKI GCWGC 4 cut(s) 460, 785, 1634, 1976
ApoI RAATTY 5 cut(s) 642, 1225, 1244, 1267, 1399
ArsI GACNNNNNNTTYG 3 cut(s) 962, 994, 2109
AseI ATTAAT 1 cut(s) 1545
Asp700I GAANNNNTTC 2 cut(s) 373, 1324
AspLEI GCGC 4 cut(s) 50, 194, 253, 722
AspS9I GGNCC 5 cut(s) 76, 353, 599, 1127, 1655
AsuHPI GGTGA 6 cut(s) 199, 311, 343, 717, 1016, 1395
AsuNHI GCTAGC 1 cut(s) 1438
AvaI CYCGRG 2 cut(s) 40, 1173
AvaII GGWCC 3 cut(s) 353, 1127, 1655
BaeGI GKGCMC 1 cut(s) 555
BamHI GGATCC 1 cut(s) 2000
BanI GGYRCC 1 cut(s) 191
BanII GRGCYC 1 cut(s) 1862
BbsI GAAGAC 1 cut(s) 657
Bbv12I GWGCWC 4 cut(s) 309, 1389, 1700, 1862
BbvI GCAGC 4 cut(s) 472, 797, 1621, 1963
BccI CCATC 6 cut(s) 773, 853, 1097, 1512, 1939, 1961
BceAI ACGGC 1 cut(s) 2108
BciT130I CCWGG 3 cut(s) 25, 366, 861
BfmI CTRYAG 2 cut(s) 1659, 1977
BfoI RGCGCY 2 cut(s) 195, 723
BfuAI ACCTGC 2 cut(s) 341, 1652
BglII AGATCT 1 cut(s) 1682
BisI GCNGC 8 cut(s) 71, 86, 140, 190, 461, 786, 1635, 1977
BlsI GCNGC 8 cut(s) 72, 87, 141, 191, 462, 787, 1636, 1978
Bme1390I CCNGG 3 cut(s) 25, 366, 861
Bme18I GGWCC 3 cut(s) 353, 1127, 1655
BmeT110I CYCGRG 2 cut(s) 40, 1173
BmgT120I GGNCC 5 cut(s) 76, 353, 599, 1127, 1655
BmiI GGNNCC 6 cut(s) 193, 273, 600, 865, 1608, 2002
BmrFI CCNGG 3 cut(s) 25, 366, 861
BmrI ACTGGG 1 cut(s) 1871
BmsI GCATC 7 cut(s) 547, 839, 1084, 1963, 1963, 2038, 2110
BmtI GCTAGC 1 cut(s) 1442
BmuI ACTGGG 1 cut(s) 1871
BpiI GAAGAC 1 cut(s) 657
BpmI CTGGAG 2 cut(s) 603, 657
Bpu10I CCTNAGC 1 cut(s) 840
BpuEI CTTGAG 2 cut(s) 1320, 1592
BsaHI GRCGYC 1 cut(s) 192
BsaJI CCNNGG 5 cut(s) 24, 594, 867, 1715, 2102
BsaXI ACNNNNNCTCC 2 cut(s) 1150, 1180
Bsc4I CCNNNNNNNGG 7 cut(s) 26, 548, 998, 1064, 1175, 1449, 1664
Bse118I RCCGGY 2 cut(s) 73, 223
Bse1I ACTGG 4 cut(s) 301, 1306, 1877, 2043
Bse3DI GCAATG 3 cut(s) 795, 1443, 1657
BseBI CCWGG 3 cut(s) 25, 366, 861
BseDI CCNNGG 5 cut(s) 24, 594, 867, 1715, 2102
BseGI GGATG 5 cut(s) 538, 1108, 1233, 1348, 1523
BseLI CCNNNNNNNGG 7 cut(s) 26, 548, 998, 1064, 1175, 1449, 1664
BseMI GCAATG 3 cut(s) 795, 1443, 1657
BseMII CTCAG 1 cut(s) 1941
BseNI ACTGG 4 cut(s) 301, 1306, 1877, 2043
BseRI GAGGAG 5 cut(s) 600, 725, 1158, 1161, 1718
BseSI GKGCMC 1 cut(s) 555
BseXI GCAGC 4 cut(s) 472, 797, 1621, 1963
BseYI CCCAGC 1 cut(s) 121
Bsh1236I CGCG 4 cut(s) 251, 885, 1797, 1829
BshFI GGCC 7 cut(s) 77, 364, 402, 601, 859, 924, 1260
BshNI GGYRCC 1 cut(s) 191
BsiHKAI GWGCWC 4 cut(s) 309, 1389, 1700, 1862
BsiHKCI CYCGRG 2 cut(s) 40, 1173
BsiSI CCGG 6 cut(s) 74, 167, 186, 224, 275, 1261
BslFI GGGAC 3 cut(s) 503, 1000, 1801
BslI CCNNNNNNNGG 7 cut(s) 26, 548, 998, 1064, 1175, 1449, 1664
BsmFI GGGAC 3 cut(s) 503, 1000, 1801
BsmI GAATGC 1 cut(s) 295
BsnI GGCC 7 cut(s) 77, 364, 402, 601, 859, 924, 1260
BsoBI CYCGRG 2 cut(s) 40, 1173
Bsp1286I GDGCHC 5 cut(s) 309, 555, 1389, 1700, 1862
Bsp143I GATC 8 cut(s) 163, 1115, 1178, 1682, 2000, 2014, 2052, 2090
Bsp19I CCATGG 1 cut(s) 867
BspANI GGCC 7 cut(s) 77, 364, 402, 601, 859, 924, 1260
BspCNI CTCAG 1 cut(s) 1942
BspFNI CGCG 4 cut(s) 251, 885, 1797, 1829
BspLI GGNNCC 6 cut(s) 193, 273, 600, 865, 1608, 2002
BspMAI CTGCAG 2 cut(s) 1663, 1981
BspMI ACCTGC 2 cut(s) 341, 1652
BspOI GCTAGC 1 cut(s) 1442
BspPI GGATC 7 cut(s) 158, 1123, 1186, 1995, 2008, 2047, 2098
BspT107I GGYRCC 1 cut(s) 191
BsrDI GCAATG 3 cut(s) 795, 1443, 1657
BsrFI RCCGGY 2 cut(s) 73, 223
BsrI ACTGG 4 cut(s) 301, 1306, 1877, 2043
BssAI RCCGGY 2 cut(s) 73, 223
BssECI CCNNGG 5 cut(s) 24, 594, 867, 1715, 2102
BssMI GATC 8 cut(s) 163, 1115, 1178, 1682, 2000, 2014, 2052, 2090
BssNAI GTATAC 1 cut(s) 1063
BssNI GRCGYC 1 cut(s) 192
BssT1I CCWWGG 3 cut(s) 594, 867, 2102
Bst1107I GTATAC 1 cut(s) 1063
Bst2UI CCWGG 3 cut(s) 25, 366, 861
Bst4CI ACNGT 5 cut(s) 21, 235, 1356, 1920, 1994
Bst6I CTCTTC 2 cut(s) 693, 1422
BstACI GRCGYC 1 cut(s) 192
BstDEI CTNAG 2 cut(s) 840, 1950
BstDSI CCRYGG 2 cut(s) 867, 1715
BstEII GGTNACC 1 cut(s) 331
BstENI CCTNNNNNAGG 1 cut(s) 1173
BstF5I GGATG 5 cut(s) 538, 1108, 1233, 1348, 1523
BstFNI CGCG 4 cut(s) 251, 885, 1797, 1829
BstH2I RGCGCY 2 cut(s) 195, 723
BstHHI GCGC 4 cut(s) 50, 194, 253, 722
BstKTI GATC 8 cut(s) 166, 1118, 1181, 1685, 2003, 2017, 2055, 2093
BstMBI GATC 8 cut(s) 163, 1115, 1178, 1682, 2000, 2014, 2052, 2090
BstMWI GCNNNNNNNGC 6 cut(s) 54, 136, 145, 248, 921, 1143
BstNI CCWGG 3 cut(s) 25, 366, 861
BstNSI RCATGY 1 cut(s) 855
BstPI GGTNACC 1 cut(s) 331
BstSCI CCNGG 3 cut(s) 23, 364, 859
BstSFI CTRYAG 2 cut(s) 1659, 1977
BstSLI GKGCMC 1 cut(s) 555
BstUI CGCG 4 cut(s) 251, 885, 1797, 1829
BstV1I GCAGC 4 cut(s) 472, 797, 1621, 1963
BstV2I GAAGAC 1 cut(s) 657
BstX2I RGATCY 3 cut(s) 1178, 1682, 2000
BstYI RGATCY 3 cut(s) 1178, 1682, 2000
BstZ17I GTATAC 1 cut(s) 1063
BsuRI GGCC 7 cut(s) 77, 364, 402, 601, 859, 924, 1260
BtgI CCRYGG 2 cut(s) 867, 1715
BtsCI GGATG 5 cut(s) 538, 1108, 1233, 1348, 1523
BtsIMutI CAGTG 2 cut(s) 1947, 2050
BveI ACCTGC 2 cut(s) 341, 1652
CaiI CAGNNNCTG 1 cut(s) 466
CfoI GCGC 4 cut(s) 50, 194, 253, 722
Cfr10I RCCGGY 2 cut(s) 73, 223
Cfr13I GGNCC 5 cut(s) 76, 353, 599, 1127, 1655
CseI GACGC 2 cut(s) 145, 1818
Csp6I GTAC 2 cut(s) 872, 1748
CviAII CATG 5 cut(s) 614, 655, 852, 868, 1836
CviQI GTAC 2 cut(s) 872, 1748
DdeI CTNAG 2 cut(s) 840, 1950
DinI GGCGCC 1 cut(s) 193
DpnI GATC 8 cut(s) 165, 1117, 1180, 1684, 2002, 2016, 2054, 2092
DpnII GATC 8 cut(s) 163, 1115, 1178, 1682, 2000, 2014, 2052, 2090
DraI TTTAAA 1 cut(s) 1728
DraIII CACNNNGTG 1 cut(s) 905
EaeI YGGCCR 1 cut(s) 1258
Eam1104I CTCTTC 2 cut(s) 693, 1422
EarI CTCTTC 2 cut(s) 693, 1422
Ecl136II GAGCTC 1 cut(s) 1860
Eco130I CCWWGG 3 cut(s) 594, 867, 2102
Eco24I GRGCYC 1 cut(s) 1862
Eco47I GGWCC 3 cut(s) 353, 1127, 1655
Eco53kI GAGCTC 1 cut(s) 1860
Eco57I CTGAAG 3 cut(s) 83, 488, 1767
Eco88I CYCGRG 2 cut(s) 40, 1173
Eco91I GGTNACC 1 cut(s) 331
EcoICRI GAGCTC 1 cut(s) 1860
EcoNI CCTNNNNNAGG 1 cut(s) 1173
EcoO109I RGGNCCY 2 cut(s) 353, 599
EcoO65I GGTNACC 1 cut(s) 331
EcoRII CCWGG 3 cut(s) 23, 364, 859
EcoT14I CCWWGG 3 cut(s) 594, 867, 2102
EcoT22I ATGCAT 2 cut(s) 795, 1099
EcoT38I GRGCYC 1 cut(s) 1862
EgeI GGCGCC 1 cut(s) 193
EheI GGCGCC 1 cut(s) 193
ErhI CCWWGG 3 cut(s) 594, 867, 2102
FaeI CATG 5 cut(s) 617, 658, 855, 871, 1839
FalI AAGNNNNNCTT 4 cut(s) 1757, 1789, 2069, 2101
FaqI GGGAC 3 cut(s) 503, 1000, 1801
FatI CATG 5 cut(s) 613, 654, 851, 867, 1835
FauI CCCGC 5 cut(s) 86, 113, 117, 256, 1834
FblI GTMKAC 1 cut(s) 1062
Fnu4HI GCNGC 8 cut(s) 71, 86, 140, 190, 461, 786, 1635, 1977
FokI GGATG 5 cut(s) 525, 1115, 1220, 1335, 1530
FriOI GRGCYC 1 cut(s) 1862
Fsp4HI GCNGC 8 cut(s) 71, 86, 140, 190, 461, 786, 1635, 1977
GlaI GCGC 4 cut(s) 49, 193, 252, 721
GluI GCNGC 8 cut(s) 71, 86, 140, 190, 461, 786, 1635, 1977
GsaI CCCAGC 1 cut(s) 125
GsuI CTGGAG 2 cut(s) 603, 657
HaeII RGCGCY 2 cut(s) 195, 723
HaeIII GGCC 7 cut(s) 77, 364, 402, 601, 859, 924, 1260
HapII CCGG 6 cut(s) 74, 167, 186, 224, 275, 1261
HgaI GACGC 2 cut(s) 145, 1818
HhaI GCGC 4 cut(s) 50, 194, 253, 722
Hin1I GRCGYC 1 cut(s) 192
Hin1II CATG 5 cut(s) 617, 658, 855, 871, 1839
Hin6I GCGC 4 cut(s) 48, 192, 251, 720
HinP1I GCGC 4 cut(s) 48, 192, 251, 720
HincII GTYRAC 2 cut(s) 1819, 1941
HindII GTYRAC 2 cut(s) 1819, 1941
HinfI GANTC 3 cut(s) 94, 317, 809
HpaII CCGG 6 cut(s) 74, 167, 186, 224, 275, 1261
HphI GGTGA 6 cut(s) 199, 311, 343, 717, 1016, 1395
Hpy166II GTNNAC 7 cut(s) 443, 987, 1063, 1819, 1833, 1941, 2028
Hpy188III TCNNGA 7 cut(s) 42, 260, 636, 647, 954, 1571, 2056
Hpy8I GTNNAC 7 cut(s) 443, 987, 1063, 1819, 1833, 1941, 2028
Hpy99I CGWCG 3 cut(s) 11, 94, 161
HpyAV CCTTC 9 cut(s) 223, 254, 463, 935, 1335, 1488, 1791, 1876, 2046
HpyCH4III ACNGT 5 cut(s) 21, 235, 1356, 1920, 1994
HpyCH4V TGCA 7 cut(s) 740, 793, 1051, 1097, 1370, 1661, 1979
HpyF10VI GCNNNNNNNGC 6 cut(s) 54, 136, 145, 248, 921, 1143
HpyF3I CTNAG 2 cut(s) 840, 1950
Hsp92I GRCGYC 1 cut(s) 192
Hsp92II CATG 5 cut(s) 617, 658, 855, 871, 1839
HspAI GCGC 4 cut(s) 48, 192, 251, 720
KasI GGCGCC 1 cut(s) 191
KroI GCCGGC 2 cut(s) 73, 223
KroNI GCCGGC 2 cut(s) 75, 225
Kzo9I GATC 8 cut(s) 163, 1115, 1178, 1682, 2000, 2014, 2052, 2090
LmnI GCTCC 3 cut(s) 271, 1384, 1532
Lsp1109I GCAGC 4 cut(s) 472, 797, 1621, 1963
LweI GCATC 7 cut(s) 547, 839, 1084, 1963, 1963, 2038, 2110
MaeIII GTNAC 2 cut(s) 299, 331
MalI GATC 8 cut(s) 165, 1117, 1180, 1684, 2002, 2016, 2054, 2092
MboI GATC 8 cut(s) 163, 1115, 1178, 1682, 2000, 2014, 2052, 2090
MfeI CAATTG 1 cut(s) 1203
MflI RGATCY 3 cut(s) 1178, 1682, 2000
MhlI GDGCHC 5 cut(s) 309, 555, 1389, 1700, 1862
MluI ACGCGT 1 cut(s) 1795
Mly113I GGCGCC 1 cut(s) 192
MlyI GAGTC 1 cut(s) 88
Mph1103I ATGCAT 2 cut(s) 795, 1099
MreI CGCCGGCG 1 cut(s) 223
MroNI GCCGGC 2 cut(s) 73, 223
MroXI GAANNNNTTC 2 cut(s) 373, 1324
MseI TTAA 8 cut(s) 237, 1041, 1286, 1545, 1602, 1727, 2076, 2134
MslI CAYNNNNRTG 3 cut(s) 312, 798, 850
MspA1I CMGCKG 2 cut(s) 1895, 1960
MspI CCGG 6 cut(s) 74, 167, 186, 224, 275, 1261
MspR9I CCNGG 3 cut(s) 25, 366, 861
MunI CAATTG 1 cut(s) 1203
Mva1269I GAATGC 1 cut(s) 295
MvaI CCWGG 3 cut(s) 25, 366, 861
MvnI CGCG 4 cut(s) 251, 885, 1797, 1829
MwoI GCNNNNNNNGC 6 cut(s) 54, 136, 145, 248, 921, 1143
NaeI GCCGGC 2 cut(s) 75, 225
NarI GGCGCC 1 cut(s) 192
NcoI CCATGG 1 cut(s) 867
NdeII GATC 8 cut(s) 163, 1115, 1178, 1682, 2000, 2014, 2052, 2090
NgoMIV GCCGGC 2 cut(s) 73, 223
NheI GCTAGC 1 cut(s) 1438
NlaIII CATG 5 cut(s) 617, 658, 855, 871, 1839
NlaIV GGNNCC 6 cut(s) 193, 273, 600, 865, 1608, 2002
NmeAIII GCCGAG 2 cut(s) 151, 178
NmuCI GTSAC 2 cut(s) 299, 331
NsiI ATGCAT 2 cut(s) 795, 1099
NspI RCATGY 1 cut(s) 855
PaeR7I CTCGAG 2 cut(s) 40, 1173
PaqCI CACCTGC 1 cut(s) 1652
PciI ACATGT 1 cut(s) 851
PctI GAATGC 1 cut(s) 295
PdiI GCCGGC 2 cut(s) 75, 225
PdmI GAANNNNTTC 2 cut(s) 373, 1324
PfeI GAWTC 2 cut(s) 317, 809
PflFI GACNNNGTC 2 cut(s) 19, 494
PflMI CCANNNNNTGG 1 cut(s) 1449
PkrI GCNGC 8 cut(s) 72, 87, 141, 191, 462, 787, 1636, 1978
PleI GAGTC 1 cut(s) 88
PluTI GGCGCC 1 cut(s) 195
PpsI GAGTC 1 cut(s) 88
PpuMI RGGWCCY 1 cut(s) 353
PscI ACATGT 1 cut(s) 851
PshBI ATTAAT 1 cut(s) 1545
Psp124BI GAGCTC 1 cut(s) 1862
Psp5II RGGWCCY 1 cut(s) 353
Psp6I CCWGG 3 cut(s) 23, 364, 859
PspEI GGTNACC 1 cut(s) 331
PspFI CCCAGC 1 cut(s) 121
PspGI CCWGG 3 cut(s) 23, 364, 859
PspN4I GGNNCC 6 cut(s) 193, 273, 600, 865, 1608, 2002
PspPI GGNCC 5 cut(s) 76, 353, 599, 1127, 1655
PspPPI RGGWCCY 1 cut(s) 353
PspXI VCTCGAGB 1 cut(s) 1173
PstI CTGCAG 2 cut(s) 1663, 1981
PstNI CAGNNNCTG 1 cut(s) 466
PsuI RGATCY 3 cut(s) 1178, 1682, 2000
PsyI GACNNNGTC 2 cut(s) 19, 494
PvuII CAGCTG 1 cut(s) 1960
RsaI GTAC 2 cut(s) 873, 1749
RsaNI GTAC 2 cut(s) 872, 1748
RseI CAYNNNNRTG 3 cut(s) 312, 798, 850
SacI GAGCTC 1 cut(s) 1862
SaqAI TTAA 8 cut(s) 237, 1041, 1286, 1545, 1602, 1727, 2076, 2134
SatI GCNGC 8 cut(s) 71, 86, 140, 190, 461, 786, 1635, 1977
Sau3AI GATC 8 cut(s) 163, 1115, 1178, 1682, 2000, 2014, 2052, 2090
Sau96I GGNCC 5 cut(s) 76, 353, 599, 1127, 1655
SbfI CCTGCAGG 1 cut(s) 1663
SchI GAGTC 1 cut(s) 88
ScrFI CCNGG 3 cut(s) 25, 366, 861
SdaI CCTGCAGG 1 cut(s) 1663
SduI GDGCHC 5 cut(s) 309, 555, 1389, 1700, 1862
SfaNI GCATC 7 cut(s) 547, 839, 1084, 1963, 1963, 2038, 2110
SfcI CTRYAG 2 cut(s) 1659, 1977
SfoI GGCGCC 1 cut(s) 193
Sfr274I CTCGAG 2 cut(s) 40, 1173
SgrAI CRCCGGYG 1 cut(s) 223
SinI GGWCC 3 cut(s) 353, 1127, 1655
SlaI CTCGAG 2 cut(s) 40, 1173
SmiMI CAYNNNNRTG 3 cut(s) 312, 798, 850
SmlI CTYRAG 4 cut(s) 40, 1173, 1335, 1571
SmoI CTYRAG 4 cut(s) 40, 1173, 1335, 1571
Sse8387I CCTGCAGG 1 cut(s) 1663
SspDI GGCGCC 1 cut(s) 191
SstI GAGCTC 1 cut(s) 1862
StyD4I CCNGG 3 cut(s) 23, 364, 859
StyI CCWWGG 3 cut(s) 594, 867, 2102
TaaI ACNGT 5 cut(s) 21, 235, 1356, 1920, 1994
TaqI TCGA 2 cut(s) 41, 1174
TauI GCSGC 4 cut(s) 73, 88, 142, 192
TfiI GAWTC 2 cut(s) 317, 809
Tru1I TTAA 8 cut(s) 237, 1041, 1286, 1545, 1602, 1727, 2076, 2134
Tru9I TTAA 8 cut(s) 237, 1041, 1286, 1545, 1602, 1727, 2076, 2134
TscAI CASTG 2 cut(s) 1954, 2050
TseFI GTSAC 2 cut(s) 299, 331
TseI GCWGC 4 cut(s) 460, 785, 1634, 1976
Tsp45I GTSAC 2 cut(s) 299, 331
TspDTI ATGAA 6 cut(s) 279, 811, 917, 1181, 1185, 1337
TspGWI ACGGA 1 cut(s) 1732
TspRI CASTG 2 cut(s) 1954, 2050
Tth111I GACNNNGTC 2 cut(s) 19, 494
Van91I CCANNNNNTGG 1 cut(s) 1449
VpaK11BI GGWCC 3 cut(s) 353, 1127, 1655
VspI ATTAAT 1 cut(s) 1545
XagI CCTNNNNNAGG 1 cut(s) 1173
XapI RAATTY 5 cut(s) 642, 1225, 1244, 1267, 1399
XbaI TCTAGA 1 cut(s) 953
XceI RCATGY 1 cut(s) 855
XcmI CCANNNNNNNNNTGG 1 cut(s) 852
XhoI CTCGAG 2 cut(s) 40, 1173
XmiI GTMKAC 1 cut(s) 1062
XmnI GAANNNNTTC 2 cut(s) 373, 1324
Zsp2I ATGCAT 2 cut(s) 795, 1099
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.