FvH4_1g05240

ADP-ribosylation factor GTPase-activating protein AGD14

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0006003
Physical Location & Seq
Reverse (-)
2788309 .. 2794713
6405 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g05240.t5

Sequence Viewer

Length: 2076 bp
ATGGCGAGCCGAAAGGAGGATGAGAAGAATGAACGGATTATTCGTGGCCTTCTTAAACTTCCTGAGAATCGGAGGTGCATTAACTGCAATAGTCTGGGGCCGCAGTATGTTTGCACAAATTTCTGGACGTTTGTTTGCACCAACTGCAGTGGAATACATCGGGAGTTCACGCACCGAGTAAAATCAGTGTCGATGGCTAAGTTTACGTCGCAAGAAGTTAAATCCCTTCAAGAAGGGGGAAACCAGCGTGCAAAGGAAATTTATCAAAAAGAGTTAGATCCGCAACGTAATTCCTTCCCTGATAGCAGTAATGTTGAGAGACTCCGAGACTTTATTAAGCATGTGTACGTGGATAGAAGGTATACTGGTGAAAGAAACATTGACAAGCCACCGAGGCTAAAAACGGGGGACAAGGAGGACTCTTATGAAAATAGAAGGCTAGATTCATATCAGGGTTCTCGAAGCCCACCATATGATGATGACCGTCGTAGTGAAAGGTCCAGTCCTGGTGGTAGAAGTTATGAGGACCAAAGGAGTCCTGGATATGATCAAGAAAGTCGACAATATGGTGATTCTAAGAGAAGTCCTTCTCGCCCTGAAATTGTGAATGATTGGCGTCGAGAAGATAGATTTGGAAATGGTAGGCGATATGATGATCGTAGAGGATCCGATGGAGATTCTAAACTTTATGCGAAATCTCCTGATCGATCAAGAGATATAGATTCGTCCAGTCCGCCTATGGTACGACCTGTTAGAGATATTTTGGGTGATAAGACAATACCTCTCCGTATTATTGAACCTCCTAAAGCCAACAGTGTTAGGGCTACTGAAGGTCCCGTGGTTACGCAGAGAACTGCATCTTCCAGTAGCTTGGGTTCCACCAACGGGAACCCAGTTGAAGTGAAACCGGAGACTTCTGTAAGTTTAATTGATTTTGATGCTGATATTGAACCTGCTCCAGCTCCAGCAGTTCCTCAAACACAACAAGCTTCTGTAGCTCAATCATATTCACAGCCAGAAAATTCACAGAGTGACAACAACTGGGCTTCTTTTGATGTTGCCCCACAAGTGAAAGCAACTCAAGCTCCTCCAAGTGCAAATTCTTTGGAATCTCTGCTATCACAGTTGTCTGTTTCGGCACCTGTCCCTAGTTATTCTGGAACTTCAGTTGCACCAGTTACGAGCTTGTCAACATTTCCCCCTGTCGGTGCTCCAGTTGCGACCCCTGGATTGGCTCAAGTATTCCCAACCAATACTAGTAATGTCTCTGCTACCGGTTCTGGGCAATGGCCTAGTATGCAGCATCAGCAACCTTCTTTATTCCCTTCTAATGGCATTCAGTCTGCCTCTCAGCAATACATTCCATCAGCTGGTGGAGCTTCAAGCAATCAACCATGGAATTCAGCTCAGGGTCAACCTAGTTATCCAGCTGCACAAGCGCCACAAGATGTTTCAAGATCTAACCACAATGTTAGTAATGTTGCATCACAACATTCAGCTGGGGATGTAAAATCAATTGGAAGAAGTGCACTTCCTGAGGATCTTTTTGCTATGAACTATTCATCCTACCCTGCACCAGTTCCCGGATGGCAGACTGGTCCTCCTCATGGTATGGGGTTTGCAATGCCGTACAATACTGCAATGCCCATTCCCAGTTTTCAGCAGTCTCTAAAGTCAGCAAACCCGTTTGATGTCAGTAGTGATCCTCCTCCAGTTCAAGCCTCAACGTTTCATTCCATGGCACCCTCACAAGGACCGCTACCAAATGTGCAGCCTCCATCTGACTTATTGCGTACATCTAGCCTGGGGGCACTCCCATCAGCTTGGGGGCCCTCATATTCATCTGGATTGCCTCTCCAAGCACCGCCATATGCATCACAAATGCCTCCAAGTGCCTATGCAGGACAACAAATTCCGAGTAGCTTGCCACCTCCAGGGTATCAAGGAGCAGGAGGCTTTAGTGCTGAGGGAGCTGCCTTTGGTTCGTTAAATATGGTACACCAGCCGGTTGGTAGATACTCAGCACCTGCTACCCCAAATCCTTTCCCGTCTGCCGGAGGAAACCCATTTGGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ArfGap

Protein Analysis

692

Amino Acids

74.58

Weight (kDa)

7.64

Isoelectric Point (pI)

71.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ArfGap PF01412 12 - 122 2.3e-30 Putative GTPase activating protein for Arf
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2035
Acc36I ACCTGC 2 cut(s) 961, 2035
AccB1I GGYRCC 2 cut(s) 1138, 1741
AccB7I CCANNNNNTGG 1 cut(s) 1370
AccI GTMKAC 2 cut(s) 362, 559
AciI CCGC 5 cut(s) 101, 281, 734, 1757, 1865
AclI AACGTT 1 cut(s) 1727
AclWI GGATC 5 cut(s) 272, 660, 673, 1548, 1697
AcsI RAATTY 6 cut(s) 118, 258, 1021, 1099, 1399, 1911
AcuI CTGAAG 2 cut(s) 849, 1149
AcyI GRCGYC 1 cut(s) 616
AdeI CACNNNGTG 1 cut(s) 1031
AfaI GTAC 5 cut(s) 347, 744, 1631, 1795, 1998
AgeI ACCGGT 1 cut(s) 1274
AgsI TTSAA 7 cut(s) 230, 797, 899, 950, 1383, 1455, 1718
AhlI ACTAGT 1 cut(s) 1256
AjnI CCWGG 5 cut(s) 505, 538, 1225, 1803, 1933
AjuI GAANNNNNNNTTGG 4 cut(s) 615, 647, 1084, 1116
AloI GAACNNNNNNTCC 2 cut(s) 1547, 1579
Alw21I GWGCWC 2 cut(s) 1213, 1531
Alw26I GTCTC 5 cut(s) 313, 321, 905, 1270, 1671
Alw44I GTGCAC 1 cut(s) 1527
AlwI GGATC 5 cut(s) 272, 660, 673, 1548, 1697
AlwNI CAGNNNCTG 1 cut(s) 2027
AoxI GGCC 4 cut(s) 46, 98, 1289, 1829
ApaI GGGCCC 1 cut(s) 1833
ApaLI GTGCAC 1 cut(s) 1527
ApeKI GCWGC 4 cut(s) 1300, 1430, 1771, 1973
ApoI RAATTY 6 cut(s) 118, 258, 1021, 1099, 1399, 1911
AsiGI ACCGGT 1 cut(s) 1274
Asp700I GAANNNNTTC 1 cut(s) 586
AspLEI GCGC 1 cut(s) 1441
AspS9I GGNCC 8 cut(s) 98, 498, 526, 833, 1598, 1754, 1829, 1830
AsuC2I CCSGG 1 cut(s) 1584
AsuHPI GGTGA 3 cut(s) 380, 581, 779
AvaII GGWCC 5 cut(s) 498, 526, 833, 1598, 1754
AxyI CCTNAGG 1 cut(s) 1536
BaeGI GKGCMC 3 cut(s) 1531, 1813, 1833
BamHI GGATCC 1 cut(s) 665
BanI GGYRCC 2 cut(s) 1138, 1741
BanII GRGCYC 1 cut(s) 1833
Bbv12I GWGCWC 2 cut(s) 1213, 1531
BbvCI CCTCAGC 1 cut(s) 1965
BbvI GCAGC 4 cut(s) 1312, 1417, 1783, 1960
BccI CCATC 6 cut(s) 187, 665, 1372, 1581, 1786, 1825
BceAI ACGGC 1 cut(s) 1612
BcgI CGANNNNNNTGC 2 cut(s) 1906, 1940
BciT130I CCWGG 5 cut(s) 507, 540, 1227, 1805, 1935
BclI TGATCA 1 cut(s) 547
BcnI CCSGG 1 cut(s) 1584
BcoDI GTCTC 5 cut(s) 313, 321, 905, 1270, 1671
BcuI ACTAGT 1 cut(s) 1256
BfaI CTAG 6 cut(s) 440, 1149, 1257, 1293, 1419, 1800
BfmI CTRYAG 2 cut(s) 145, 993
BfoI RGCGCY 1 cut(s) 1442
BfuAI ACCTGC 2 cut(s) 961, 2035
BglI GCCNNNNNGGC 1 cut(s) 394
BglII AGATCT 1 cut(s) 1457
BisI GCNGC 5 cut(s) 101, 1301, 1431, 1772, 1974
BlsI GCNGC 5 cut(s) 102, 1302, 1432, 1773, 1975
Bme1390I CCNGG 6 cut(s) 507, 540, 1227, 1584, 1805, 1935
Bme18I GGWCC 5 cut(s) 498, 526, 833, 1598, 1754
BmgT120I GGNCC 8 cut(s) 98, 498, 526, 833, 1598, 1754, 1829, 1830
BmiI GGNNCC 9 cut(s) 99, 667, 835, 877, 890, 1140, 1743, 1830, 1831
BmrFI CCNGG 6 cut(s) 507, 540, 1227, 1584, 1805, 1935
BmrI ACTGGG 3 cut(s) 887, 1051, 1647
BmsI GCATC 5 cut(s) 866, 928, 1312, 1493, 1883
BmuI ACTGGG 3 cut(s) 887, 1051, 1647
BpmI CTGGAG 5 cut(s) 942, 948, 1197, 1695, 1917
Bpu10I CCTNAGC 2 cut(s) 1407, 1965
BpuEI CTTGAG 2 cut(s) 1065, 1221
BpuMI CCSGG 1 cut(s) 1584
Bsa29I ATCGAT 1 cut(s) 706
BsaAI YACGTR 1 cut(s) 349
BsaBI GATNNNNATC 1 cut(s) 447
BsaHI GRCGYC 1 cut(s) 616
BsaJI CCNNGG 7 cut(s) 392, 837, 1225, 1394, 1737, 1804, 1934
BsaWI WCCGGW 2 cut(s) 907, 1274
BsaXI ACNNNNNCTCC 4 cut(s) 1069, 1099, 1585, 1615
Bse118I RCCGGY 2 cut(s) 1274, 2005
Bse21I CCTNAGG 1 cut(s) 1536
Bse3DI GCAATG 3 cut(s) 1292, 1629, 1647
Bse8I GATNNNNATC 1 cut(s) 447
BseBI CCWGG 5 cut(s) 507, 540, 1227, 1805, 1935
BseCI ATCGAT 1 cut(s) 706
BseDI CCNNGG 7 cut(s) 392, 837, 1225, 1394, 1737, 1804, 1934
BseGI GGATG 4 cut(s) 25, 1510, 1562, 1592
BseJI GATNNNNATC 1 cut(s) 447
BseMI GCAATG 3 cut(s) 1292, 1629, 1647
BseMII CTCAG 6 cut(s) 54, 1364, 1421, 1527, 1956, 2034
BseRI GAGGAG 3 cut(s) 1077, 1593, 1698
BseSI GKGCMC 3 cut(s) 1531, 1813, 1833
BseXI GCAGC 4 cut(s) 1312, 1417, 1783, 1960
BseYI CCCAGC 1 cut(s) 1499
BsgI GTGCAG 3 cut(s) 1416, 1557, 1790
BshFI GGCC 4 cut(s) 48, 100, 1291, 1831
BshNI GGYRCC 2 cut(s) 1138, 1741
BshTI ACCGGT 1 cut(s) 1274
BshVI ATCGAT 1 cut(s) 706
BsiHKAI GWGCWC 2 cut(s) 1213, 1531
BsiSI CCGG 5 cut(s) 908, 1275, 1584, 2006, 2055
BslFI GGGAC 3 cut(s) 422, 819, 1130
BsmAI GTCTC 5 cut(s) 313, 321, 905, 1270, 1671
BsmFI GGGAC 3 cut(s) 422, 819, 1130
BsmI GAATGC 1 cut(s) 1335
BsnI GGCC 4 cut(s) 48, 100, 1291, 1831
Bsp120I GGGCCC 1 cut(s) 1829
Bsp1286I GDGCHC 4 cut(s) 1213, 1531, 1813, 1833
Bsp143I GATC 9 cut(s) 277, 547, 655, 665, 703, 707, 1457, 1540, 1702
Bsp19I CCATGG 2 cut(s) 1394, 1737
BspACI CCGC 5 cut(s) 101, 281, 734, 1757, 1865
BspANI GGCC 4 cut(s) 48, 100, 1291, 1831
BspCNI CTCAG 6 cut(s) 55, 1363, 1420, 1528, 1957, 2033
BspDI ATCGAT 1 cut(s) 706
BspLI GGNNCC 9 cut(s) 99, 667, 835, 877, 890, 1140, 1743, 1830, 1831
BspMAI CTGCAG 1 cut(s) 149
BspMI ACCTGC 2 cut(s) 961, 2035
BspPI GGATC 5 cut(s) 272, 660, 673, 1548, 1697
BspT107I GGYRCC 2 cut(s) 1138, 1741
BsrDI GCAATG 3 cut(s) 1292, 1629, 1647
BsrFI RCCGGY 2 cut(s) 1274, 2005
BssAI RCCGGY 2 cut(s) 1274, 2005
BssECI CCNNGG 7 cut(s) 392, 837, 1225, 1394, 1737, 1804, 1934
BssMI GATC 9 cut(s) 277, 547, 655, 665, 703, 707, 1457, 1540, 1702
BssNAI GTATAC 1 cut(s) 363
BssNI GRCGYC 1 cut(s) 616
BssT1I CCWWGG 2 cut(s) 1394, 1737
Bst1107I GTATAC 1 cut(s) 363
Bst2UI CCWGG 5 cut(s) 507, 540, 1227, 1805, 1935
Bst4CI ACNGT 3 cut(s) 485, 815, 1125
BstACI GRCGYC 1 cut(s) 616
BstAPI GCANNNNNTGC 2 cut(s) 84, 144
BstBAI YACGTR 1 cut(s) 349
BstC8I GCNNGC 3 cut(s) 7, 249, 1925
BstDEI CTNAG 8 cut(s) 63, 198, 576, 1350, 1407, 1536, 1965, 2020
BstDSI CCRYGG 3 cut(s) 837, 1394, 1737
BstF5I GGATG 4 cut(s) 25, 1510, 1562, 1592
BstH2I RGCGCY 1 cut(s) 1442
BstHHI GCGC 1 cut(s) 1441
BstKTI GATC 9 cut(s) 280, 550, 658, 668, 706, 710, 1460, 1543, 1705
BstMAI GTCTC 5 cut(s) 313, 321, 905, 1270, 1671
BstMBI GATC 9 cut(s) 277, 547, 655, 665, 703, 707, 1457, 1540, 1702
BstNI CCWGG 5 cut(s) 507, 540, 1227, 1805, 1935
BstNSI RCATGY 1 cut(s) 344
BstSCI CCNGG 6 cut(s) 505, 538, 1225, 1582, 1803, 1933
BstSFI CTRYAG 2 cut(s) 145, 993
BstSLI GKGCMC 3 cut(s) 1531, 1813, 1833
BstV1I GCAGC 4 cut(s) 1312, 1417, 1783, 1960
BstX2I RGATCY 4 cut(s) 277, 665, 1457, 1540
BstXI CCANNNNNNTGG 3 cut(s) 871, 1824, 2009
BstYI RGATCY 4 cut(s) 277, 665, 1457, 1540
BstZ17I GTATAC 1 cut(s) 363
Bsu15I ATCGAT 1 cut(s) 706
Bsu36I CCTNAGG 1 cut(s) 1536
BsuRI GGCC 4 cut(s) 48, 100, 1291, 1831
BsuTUI ATCGAT 1 cut(s) 706
BtgI CCRYGG 3 cut(s) 837, 1394, 1737
BtsCI GGATG 4 cut(s) 25, 1510, 1562, 1592
BtsI GCAGTG 1 cut(s) 154
BtsIMutI CAGTG 3 cut(s) 154, 192, 820
BveI ACCTGC 2 cut(s) 961, 2035
Cac8I GCNNGC 3 cut(s) 7, 249, 1925
CaiI CAGNNNCTG 1 cut(s) 2027
CfoI GCGC 1 cut(s) 1441
Cfr10I RCCGGY 2 cut(s) 1274, 2005
Cfr13I GGNCC 8 cut(s) 98, 498, 526, 833, 1598, 1754, 1829, 1830
ClaI ATCGAT 1 cut(s) 706
CseI GACGC 1 cut(s) 605
Csp6I GTAC 5 cut(s) 346, 743, 1630, 1794, 1997
CspAI ACCGGT 1 cut(s) 1274
CspCI CAANNNNNGTGG 2 cut(s) 130, 165
CviAII CATG 4 cut(s) 341, 1395, 1607, 1738
CviQI GTAC 5 cut(s) 346, 743, 1630, 1794, 1997
DdeI CTNAG 8 cut(s) 63, 198, 576, 1350, 1407, 1536, 1965, 2020
DpnI GATC 9 cut(s) 279, 549, 657, 667, 705, 709, 1459, 1542, 1704
DpnII GATC 9 cut(s) 277, 547, 655, 665, 703, 707, 1457, 1540, 1702
DraIII CACNNNGTG 1 cut(s) 1031
EciI GGCGGA 1 cut(s) 723
Eco130I CCWWGG 2 cut(s) 1394, 1737
Eco24I GRGCYC 1 cut(s) 1833
Eco47I GGWCC 5 cut(s) 498, 526, 833, 1598, 1754
Eco57I CTGAAG 2 cut(s) 849, 1149
Eco81I CCTNAGG 1 cut(s) 1536
EcoO109I RGGNCCY 3 cut(s) 833, 1829, 1830
EcoRI GAATTC 1 cut(s) 1399
EcoRII CCWGG 5 cut(s) 505, 538, 1225, 1803, 1933
EcoT14I CCWWGG 2 cut(s) 1394, 1737
EcoT22I ATGCAT 1 cut(s) 1876
EcoT38I GRGCYC 1 cut(s) 1833
ErhI CCWWGG 2 cut(s) 1394, 1737
FaeI CATG 4 cut(s) 344, 1398, 1610, 1741
FaqI GGGAC 3 cut(s) 422, 819, 1130
FatI CATG 4 cut(s) 340, 1394, 1606, 1737
FauNDI CATATG 2 cut(s) 472, 1870
FbaI TGATCA 1 cut(s) 547
FblI GTMKAC 2 cut(s) 362, 559
Fnu4HI GCNGC 5 cut(s) 101, 1301, 1431, 1772, 1974
FokI GGATG 4 cut(s) 32, 1517, 1549, 1599
FriOI GRGCYC 1 cut(s) 1833
Fsp4HI GCNGC 5 cut(s) 101, 1301, 1431, 1772, 1974
FspBI CTAG 6 cut(s) 440, 1149, 1257, 1293, 1419, 1800
GlaI GCGC 1 cut(s) 1440
GluI GCNGC 5 cut(s) 101, 1301, 1431, 1772, 1974
GsaI CCCAGC 1 cut(s) 1503
GsuI CTGGAG 5 cut(s) 942, 948, 1197, 1695, 1917
HaeII RGCGCY 1 cut(s) 1442
HaeIII GGCC 4 cut(s) 48, 100, 1291, 1831
HapII CCGG 5 cut(s) 908, 1275, 1584, 2006, 2055
HgaI GACGC 1 cut(s) 605
HhaI GCGC 1 cut(s) 1441
Hin1I GRCGYC 1 cut(s) 616
Hin1II CATG 4 cut(s) 344, 1398, 1610, 1741
Hin6I GCGC 1 cut(s) 1439
HinP1I GCGC 1 cut(s) 1439
HincII GTYRAC 3 cut(s) 560, 1191, 1415
HindII GTYRAC 3 cut(s) 560, 1191, 1415
HindIII AAGCTT 1 cut(s) 987
HinfI GANTC 9 cut(s) 67, 321, 419, 443, 535, 572, 677, 722, 1109
HpaII CCGG 5 cut(s) 908, 1275, 1584, 2006, 2055
HphI GGTGA 3 cut(s) 380, 581, 779
Hpy166II GTNNAC 9 cut(s) 168, 204, 346, 363, 560, 1191, 1415, 1529, 1999
Hpy188I TCNGA 5 cut(s) 72, 326, 670, 1783, 1917
Hpy8I GTNNAC 9 cut(s) 168, 204, 346, 363, 560, 1191, 1415, 1529, 1999
Hpy99I CGWCG 3 cut(s) 211, 489, 621
HpyCH4III ACNGT 3 cut(s) 485, 815, 1125
HpyCH4IV ACGT 5 cut(s) 128, 206, 286, 348, 1727
HpyF3I CTNAG 8 cut(s) 63, 198, 576, 1350, 1407, 1536, 1965, 2020
HpySE526I ACGT 5 cut(s) 128, 206, 286, 348, 1727
Hsp92I GRCGYC 1 cut(s) 616
Hsp92II CATG 4 cut(s) 344, 1398, 1610, 1741
HspAI GCGC 1 cut(s) 1439
Ksp22I TGATCA 1 cut(s) 547
Kzo9I GATC 9 cut(s) 277, 547, 655, 665, 703, 707, 1457, 1540, 1702
LmnI GCTCC 7 cut(s) 961, 967, 1090, 1216, 1376, 1946, 1970
Lsp1109I GCAGC 4 cut(s) 1312, 1417, 1783, 1960
LweI GCATC 5 cut(s) 866, 928, 1312, 1493, 1883
MaeI CTAG 6 cut(s) 440, 1149, 1257, 1293, 1419, 1800
MaeII ACGT 5 cut(s) 128, 206, 286, 348, 1727
MaeIII GTNAC 3 cut(s) 841, 1031, 1177
MalI GATC 9 cut(s) 279, 549, 657, 667, 705, 709, 1459, 1542, 1704
MboI GATC 9 cut(s) 277, 547, 655, 665, 703, 707, 1457, 1540, 1702
MboII GAAGA 4 cut(s) 37, 635, 852, 1533
MfeI CAATTG 1 cut(s) 1515
MflI RGATCY 4 cut(s) 277, 665, 1457, 1540
MhlI GDGCHC 4 cut(s) 1213, 1531, 1813, 1833
MlyI GAGTC 3 cut(s) 315, 413, 544
Mph1103I ATGCAT 1 cut(s) 1876
MroXI GAANNNNTTC 1 cut(s) 586
MseI TTAA 6 cut(s) 54, 81, 219, 336, 926, 1988
MspA1I CMGCKG 3 cut(s) 1370, 1430, 1499
MspI CCGG 5 cut(s) 908, 1275, 1584, 2006, 2055
MspR9I CCNGG 6 cut(s) 507, 540, 1227, 1584, 1805, 1935
MunI CAATTG 1 cut(s) 1515
Mva1269I GAATGC 1 cut(s) 1335
MvaI CCWGG 5 cut(s) 507, 540, 1227, 1805, 1935
NciI CCSGG 1 cut(s) 1584
NcoI CCATGG 2 cut(s) 1394, 1737
NdeI CATATG 2 cut(s) 472, 1870
NdeII GATC 9 cut(s) 277, 547, 655, 665, 703, 707, 1457, 1540, 1702
NlaIII CATG 4 cut(s) 344, 1398, 1610, 1741
NlaIV GGNNCC 9 cut(s) 99, 667, 835, 877, 890, 1140, 1743, 1830, 1831
NmuCI GTSAC 1 cut(s) 1031
NsiI ATGCAT 1 cut(s) 1876
NspI RCATGY 1 cut(s) 344
PaqCI CACCTGC 1 cut(s) 2035
PcsI WCGNNNNNNNCGW 1 cut(s) 40
PctI GAATGC 1 cut(s) 1335
PdmI GAANNNNTTC 1 cut(s) 586
PfeI GAWTC 6 cut(s) 67, 443, 572, 677, 722, 1109
PflMI CCANNNNNTGG 1 cut(s) 1370
PfoI TCCNGGA 2 cut(s) 538, 1582
PinAI ACCGGT 1 cut(s) 1274
PkrI GCNGC 5 cut(s) 102, 1302, 1432, 1773, 1975
PleI GAGTC 3 cut(s) 315, 413, 543
PpsI GAGTC 3 cut(s) 315, 413, 543
Ppu21I YACGTR 1 cut(s) 349
PpuMI RGGWCCY 1 cut(s) 833
Psp1406I AACGTT 1 cut(s) 1727
Psp5II RGGWCCY 1 cut(s) 833
Psp6I CCWGG 5 cut(s) 505, 538, 1225, 1803, 1933
PspFI CCCAGC 1 cut(s) 1499
PspGI CCWGG 5 cut(s) 505, 538, 1225, 1803, 1933
PspN4I GGNNCC 9 cut(s) 99, 667, 835, 877, 890, 1140, 1743, 1830, 1831
PspOMI GGGCCC 1 cut(s) 1829
PspPI GGNCC 8 cut(s) 98, 498, 526, 833, 1598, 1754, 1829, 1830
PspPPI RGGWCCY 1 cut(s) 833
PsrI GAACNNNNNNTAC 2 cut(s) 859, 891
PstI CTGCAG 1 cut(s) 149
PstNI CAGNNNCTG 1 cut(s) 2027
PsuI RGATCY 4 cut(s) 277, 665, 1457, 1540
PvuII CAGCTG 3 cut(s) 1370, 1430, 1499
RsaI GTAC 5 cut(s) 347, 744, 1631, 1795, 1998
RsaNI GTAC 5 cut(s) 346, 743, 1630, 1794, 1997
SalI GTCGAC 1 cut(s) 558
SaqAI TTAA 6 cut(s) 54, 81, 219, 336, 926, 1988
SatI GCNGC 5 cut(s) 101, 1301, 1431, 1772, 1974
Sau3AI GATC 9 cut(s) 277, 547, 655, 665, 703, 707, 1457, 1540, 1702
Sau96I GGNCC 8 cut(s) 98, 498, 526, 833, 1598, 1754, 1829, 1830
SchI GAGTC 3 cut(s) 315, 413, 544
ScrFI CCNGG 6 cut(s) 507, 540, 1227, 1584, 1805, 1935
SduI GDGCHC 4 cut(s) 1213, 1531, 1813, 1833
SfaNI GCATC 5 cut(s) 866, 928, 1312, 1493, 1883
SfcI CTRYAG 2 cut(s) 145, 993
SinI GGWCC 5 cut(s) 498, 526, 833, 1598, 1754
SmlI CTYRAG 2 cut(s) 1080, 1236
SmoI CTYRAG 2 cut(s) 1080, 1236
SpeI ACTAGT 1 cut(s) 1256
SsiI CCGC 5 cut(s) 101, 281, 734, 1757, 1865
SspMI CTAG 6 cut(s) 440, 1149, 1257, 1293, 1419, 1800
StyD4I CCNGG 6 cut(s) 505, 538, 1225, 1582, 1803, 1933
StyI CCWWGG 2 cut(s) 1394, 1737
TaaI ACNGT 3 cut(s) 485, 815, 1125
TaiI ACGT 5 cut(s) 131, 209, 289, 351, 1730
TaqI TCGA 5 cut(s) 191, 460, 559, 619, 706
TauI GCSGC 1 cut(s) 103
TfiI GAWTC 6 cut(s) 67, 443, 572, 677, 722, 1109
Tru1I TTAA 6 cut(s) 54, 81, 219, 336, 926, 1988
Tru9I TTAA 6 cut(s) 54, 81, 219, 336, 926, 1988
TscAI CASTG 3 cut(s) 154, 192, 820
TseFI GTSAC 1 cut(s) 1031
TseI GCWGC 4 cut(s) 1300, 1430, 1771, 1973
Tsp45I GTSAC 1 cut(s) 1031
TspDTI ATGAA 7 cut(s) 45, 435, 441, 1551, 1568, 1721, 1830
TspGWI ACGGA 2 cut(s) 49, 776
TspRI CASTG 3 cut(s) 154, 192, 820
Van91I CCANNNNNTGG 1 cut(s) 1370
VneI GTGCAC 1 cut(s) 1527
VpaK11BI GGWCC 5 cut(s) 498, 526, 833, 1598, 1754
XapI RAATTY 6 cut(s) 118, 258, 1021, 1099, 1399, 1911
XceI RCATGY 1 cut(s) 344
XcmI CCANNNNNNNNNTGG 3 cut(s) 536, 736, 1584
XmiI GTMKAC 2 cut(s) 362, 559
XmnI GAANNNNTTC 1 cut(s) 586
XspI CTAG 6 cut(s) 440, 1149, 1257, 1293, 1419, 1800
Zsp2I ATGCAT 1 cut(s) 1876
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.