Rorug02G0011400

ADP-ribosylation factor GTPase-activating protein AGD14

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000111
Physical Location & Seq
Reverse (-)
1012580 .. 1027107
14528 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0011400.1

Sequence Viewer

Length: 1224 bp
ATGTCCATGAGCAACAAGACCATGCTGCAGGAGCTTTGCGTCAAAAGGGGTTGGGCCGCACCCATATATAGTAGCACCAAGCAAGGTCCAGATCACGTTCCTCAGTTCTCTGCCGCCGTCGTCGTCAACGGTGTCAGCTTCGCCTCTCAGGGCTTCCTCAGCTCCAAGAAGGAAGCTGAGGCCTTTGCTGCCGGAATCGCATTGGAAAAGTATCTTGGCCCCCAAACCCAACTGCCCATTACCCCAAAGTTCAATTCTTTCTCATCTCCAGTGAAAGTAGCTCATGTTGTTCCACAATACAACCATGTGGTAAGAGTTGAGGAGAATCAGACATGGAATGAGACTAATGCCATACAGGAAAAGAAGGGTGCTGATGAACTGGAGCAGTTGTTGGCTAAAGAACGAAAGCTGTGGCACATAGAGAAGCTTCAGCTCGAGATGAAAAACCTTGAATTAGTGAATGCGATTGAAGTGAAGAATAATGAGGTTCAGCGGTTTGAGAAGAAGCTGGAACATATGAAAGAGATGGCAACAATGGAGCAGAAGAAAACCAAAAGCATGATATCATTGGCAGAAGAGAAAAAGAGAGAAAATGAGAAACTTCATACGAGAGTTGCTGAATTGGAAAAGCAACTCCAGGCCAAACATGCAGTGGATGGGGATATGGAAGTGAAAAAGATCAACAGTCTCTCTGACTTTTCCAATGCACTTATTGTAAAGGAGCAGAGCTATAATGATGAACTTCAGGAGTCTCGTAAGGTGTTGATCAATGCATTACGTGATGGTTCAAAAGTCTCTATTGGGGTGAAGAGATTGGGAGATCTCGACTGGAAAGCATTTCAAGTTGCAGCCAAAAGAGAATATTTTGTAGAAGAGGAGGTAAATGAGAGGGCAGCGGAGTTATGCTCTATGTGGGAGAATCACATTGGAGATCCTGATTGGAATCCATTCAAGACTATCACGGATATGAGAGGAAGGAACAAGGAAATTGTTGACGAGGAAGATGAAAAGTTAAAGAAACTAAAGGAGGAATTGGGTGATGAAGCGTACGAGGTGGTGATAACTGCATTACTAGAAATGAAAGAGTATAATCCCTGTGGTAGATATAAAGTAGAAGAGCTATGGAATTTCCAACTAGGTAGGAAGGCATCATTGATAGAGGGAGTCCAATATCTTTTGAAACAACTTGATTTGGTTAACACTAAGAAGCGGCAAAGAAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ArfGap

Protein Analysis

407

Amino Acids

46.83

Weight (kDa)

6.33

Isoelectric Point (pI)

39.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DND1_DSRM PF14709 5 - 60 2.7e-06 double strand RNA binding domain from DEAD END PROTEIN 1
dsrm PF00035 6 - 70 8.9e-12 Double-stranded RNA binding motif
XH PF03469 270 - 399 3.1e-47 XH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000111)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G06240
fragaria_vesca FvH4_1g04511 FvH4_1g04521 FvH4_1g05182 FvH4_1g05210 FvH4_1g05230 FvH4_1g05231 FvH4_1g05232 FvH4_1g05391 FvH4_1g05420 FvH4_2g41451 FvH4_3g15810 FvH4_3g15810 FvH4_3g18161 FvH4_3g19801 FvH4_3g39980 FvH4_3g39980 FvH4_3g39980 FvH4_3g39990 FvH4_3g40020 FvH4_3g40020 FvH4_3g40031 FvH4_3g40040 FvH4_4g32891 FvH4_5g33121 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g38210 FvH4_5g38211 FvH4_5g39231 FvH4_6g16940 FvH4_6g33181 FvH4_7g09411 FvH4_7g23271 FvH4_7g26741 FvH4_7g28012 FvH4_7g28013 FvH4_7g28031 FvH4_7g28041
malus_domestica MD03G1104200.v1.1 MD03G1139900.v1.1 MD03G1192800.v1.1 MD10G1202200.v1.1 MD11G1131100.v1.1 MD11G1202700.v1.1 MD11G1203000.v1.1
prunus_persica Prupe.2G163500_v2.0.a1 Prupe.4G140000_v2.0.a1 Prupe.4G140100_v2.0.a1 Prupe.4G222200_v2.0.a1 Prupe.4G236200_v2.0.a1 Prupe.4G236300_v2.0.a1 Prupe.4G236400_v2.0.a1 Prupe.4G237500_v2.0.a1 Prupe.6G125500_v2.0.a1
pyrus_communis pycom03g14510 pycom05g20120 pycom11g10840 pycom11g17520 pycom11g17590 pycom15g03310
rosa_chinensis RchiOBHm_Chr0c44g0503541 RchiOBHm_Chr2g0090931 RchiOBHm_Chr2g0090941 RchiOBHm_Chr2g0090951 RchiOBHm_Chr2g0090961 RchiOBHm_Chr2g0092791 RchiOBHm_Chr2g0099041 RchiOBHm_Chr2g0169971 RchiOBHm_Chr2g0170021 RchiOBHm_Chr4g0386131 RchiOBHm_Chr4g0386141 RchiOBHm_Chr4g0386161 RchiOBHm_Chr4g0386281 RchiOBHm_Chr4g0386291 RchiOBHm_Chr4g0440811 RchiOBHm_Chr5g0026601 RchiOBHm_Chr5g0026621 RchiOBHm_Chr5g0026871 RchiOBHm_Chr5g0072021 RchiOBHm_Chr5g0072031 RchiOBHm_Chr5g0072171 RchiOBHm_Chr5g0072181 RchiOBHm_Chr7g0231281 RchiOBHm_Chr7g0231301 RchiOBHm_Chr7g0240141
rosa_laevigata RLG00000000695 RLG00000001421 RLG00000004300 RLG00000006148 RLG00000006151 RLG00000016157 RLG00000016158 RLG00000016159 RLG00000016160 RLG00000016161 RLG00000020474 RLG00000021915 RLG00000029159 RLG00000032939 RLG00000032940 RLG00000032966 RLG00000036270 RLG00000036272 RLG00000036280 RLG00000036284
rosa_multiflora Rmu_co8434269.1_g000001 Rmu_sc0000792.1_g000017 Rmu_sc0000792.1_g000018 Rmu_sc0000792.1_g000019 Rmu_sc0001132.1_g000008 Rmu_sc0001152.1_g000004 Rmu_sc0001152.1_g000033 Rmu_sc0001583.1_g000004 Rmu_sc0003305.1_g000001 Rmu_sc0003333.1_g000005 Rmu_sc0003396.1_g000010 Rmu_sc0003396.1_g000011 Rmu_sc0003396.1_g000017 Rmu_sc0004571.1_g000004 Rmu_sc0004851.1_g000003 Rmu_sc0004851.1_g000004 Rmu_sc0005008.1_g000015 Rmu_sc0006854.1_g000016 Rmu_sc0006854.1_g000023 Rmu_sc0009422.1_g000009 Rmu_sc0010610.1_g000003 Rmu_sc0018952.1_g000008 Rmu_sc0037136.1_g000001 Rmu_ssc0000172.1_g000016 Rmu_ssc0000389.1_g000005
rosa_roxburghii Rroxscaffold_1G00009050 Rroxscaffold_1G00009090 Rroxscaffold_1G00009130 Rroxscaffold_1G00009230 Rroxscaffold_1G00044650 Rroxscaffold_1G00052600 Rroxscaffold_1G00052610 Rroxscaffold_1G00052860 Rroxscaffold_1G00052880 Rroxscaffold_2G00081700 Rroxscaffold_2G00148820 Rroxscaffold_2G00150560 Rroxscaffold_2G00150570 Rroxscaffold_2G00150590 Rroxscaffold_2G00150600 Rroxscaffold_2G00150630 Rroxscaffold_2G00150730 Rroxscaffold_2G00150740 Rroxscaffold_3G00229360 Rroxscaffold_3G00262430 Rroxscaffold_4G00313090 Rroxscaffold_5G00381610
rosa_rugosa Rorug01G0285600 Rorug02G0011200 Rorug02G0011300 Rorug02G0011400 Rorug02G0012500 Rorug02G0012600 Rorug02G0012700 Rorug02G0029300 Rorug02G0075800 Rorug02G0075900 Rorug02G0419600 Rorug02G0544800 Rorug04G0112200 Rorug05G0094100 Rorug05G0094100 Rorug05G0094200 Rorug05G0415900 Rorug05G0415900 Rorug05G0416000 Rorug05G0416100 Rorug05G0416200 Rorug05G0416300 Rorug05G0416700 Rorug05G0416800 Rorug07G0265700 Rorug07G0265800 Rorug07G0265900 Rorug07G0266000 Rorug07G0266100
rosa_samantha Rh2AG057300 Rh2AG057400 Rh2AG058700 Rh2AG478800 Rh2AG616800 Rh2DG056700 Rh2DG056800 Rh2DG056900 Rh2DG073500 Rh2DG129700 Rh2DG639800 Rh4AG380100 Rh4DG386700 Rh5AG187500 Rh5AG187700 Rh5AG189200 Rh5AG472100 Rh5AG472800 Rh5BG184000 Rh5BG184200 Rh5BG185800 Rh5BG186500 Rh5CG204000 Rh5CG205800 Rh5DG186300 Rh5DG186500 Rh5DG188100 Rh5DG503500 Rh5DG503700 Rh5DG504000 Rh5DG504100 Rh5DG504700 Rh5DG504900 Rh5DG505000 Rh7AG419500 Rh7AG419800 Rh7CG439300 Rh7DG413100
rosa_wichuraiana Rw0G002880 Rw1G026240 Rw2G005200 Rw2G005210 Rw2G005820 Rw2G009640 Rw5G016980 Rw5G017000 Rw5G017190 Rw5G043880 Rw7G011300 Rw7G034680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 5 cut(s) 57, 114, 493, 896, 1210
AclWI GGATC 1 cut(s) 926
AcsI RAATTY 1 cut(s) 1126
AcuI CTGAAG 2 cut(s) 413, 728
AfaI GTAC 1 cut(s) 1049
AgsI TTSAA 7 cut(s) 253, 452, 470, 789, 842, 952, 1180
AjnI CCWGG 1 cut(s) 636
AjuI GAANNNNNNNTTGG 4 cut(s) 198, 230, 238, 270
Alw26I GTCTC 4 cut(s) 335, 692, 756, 799
AlwI GGATC 1 cut(s) 926
Ama87I CYCGRG 1 cut(s) 434
AoxI GGCC 4 cut(s) 54, 180, 217, 639
ApeKI GCWGC 4 cut(s) 25, 188, 848, 893
ApoI RAATTY 1 cut(s) 1126
Asp700I GAANNNNTTC 1 cut(s) 947
AspS9I GGNCC 3 cut(s) 54, 86, 218
AsuHPI GGTGA 3 cut(s) 817, 1049, 1069
AvaI CYCGRG 1 cut(s) 434
AvaII GGWCC 1 cut(s) 86
BbvCI CCTCAGC 2 cut(s) 158, 177
BbvI GCAGC 4 cut(s) 12, 175, 860, 905
BccI CCATC 3 cut(s) 520, 650, 776
BceAI ACGGC 1 cut(s) 101
BciT130I CCWGG 1 cut(s) 638
BclI TGATCA 1 cut(s) 765
BcoDI GTCTC 4 cut(s) 335, 692, 756, 799
BfaI CTAG 2 cut(s) 1073, 1136
BfmI CTRYAG 1 cut(s) 26
BglII AGATCT 1 cut(s) 820
BisI GCNGC 7 cut(s) 26, 57, 114, 189, 849, 894, 1211
BlsI GCNGC 7 cut(s) 27, 58, 115, 190, 850, 895, 1212
Bme1390I CCNGG 1 cut(s) 638
Bme18I GGWCC 1 cut(s) 86
BmeT110I CYCGRG 1 cut(s) 434
BmgT120I GGNCC 3 cut(s) 54, 86, 218
BmiI GGNNCC 1 cut(s) 220
BmrFI CCNGG 1 cut(s) 638
BmsI GCATC 1 cut(s) 1157
BplI GAGNNNNNCTC 2 cut(s) 890, 922
BpmI CTGGAG 3 cut(s) 252, 401, 620
Bpu10I CCTNAGC 2 cut(s) 158, 177
BsaAI YACGTR 1 cut(s) 779
BsaBI GATNNNNATC 1 cut(s) 942
BsaXI ACNNNNNCTCC 2 cut(s) 374, 404
Bse1I ACTGG 3 cut(s) 269, 384, 833
Bse8I GATNNNNATC 1 cut(s) 942
BseBI CCWGG 1 cut(s) 638
BseGI GGATG 1 cut(s) 661
BseJI GATNNNNATC 1 cut(s) 942
BseMII CTCAG 4 cut(s) 116, 161, 168, 172
BseNI ACTGG 3 cut(s) 269, 384, 833
BseRI GAGGAG 2 cut(s) 335, 890
BseXI GCAGC 4 cut(s) 12, 175, 860, 905
BshFI GGCC 4 cut(s) 56, 182, 219, 641
BsiHKCI CYCGRG 1 cut(s) 434
BsiSI CCGG 1 cut(s) 192
BsiWI CGTACG 1 cut(s) 1047
BsmAI GTCTC 4 cut(s) 335, 692, 756, 799
BsmI GAATGC 1 cut(s) 466
BsnI GGCC 4 cut(s) 56, 182, 219, 641
BsoBI CYCGRG 1 cut(s) 434
Bsp143I GATC 5 cut(s) 91, 678, 765, 820, 931
BspACI CCGC 5 cut(s) 57, 114, 493, 896, 1210
BspANI GGCC 4 cut(s) 56, 182, 219, 641
BspCNI CTCAG 4 cut(s) 115, 160, 169, 171
BspLI GGNNCC 1 cut(s) 220
BspMAI CTGCAG 1 cut(s) 30
BspPI GGATC 1 cut(s) 926
BspQI GCTCTTC 1 cut(s) 1110
BsrI ACTGG 3 cut(s) 269, 384, 833
BssMI GATC 5 cut(s) 91, 678, 765, 820, 931
Bst2UI CCWGG 1 cut(s) 638
Bst4CI ACNGT 2 cut(s) 131, 686
Bst6I CTCTTC 4 cut(s) 570, 803, 867, 1110
BstBAI YACGTR 1 cut(s) 779
BstDEI CTNAG 5 cut(s) 102, 147, 158, 177, 1203
BstF5I GGATG 1 cut(s) 661
BstKTI GATC 5 cut(s) 94, 681, 768, 823, 934
BstMAI GTCTC 4 cut(s) 335, 692, 756, 799
BstMBI GATC 5 cut(s) 91, 678, 765, 820, 931
BstMWI GCNNNNNNNGC 5 cut(s) 31, 159, 188, 197, 647
BstNI CCWGG 1 cut(s) 638
BstNSI RCATGY 1 cut(s) 650
BstSCI CCNGG 1 cut(s) 636
BstSFI CTRYAG 1 cut(s) 26
BstV1I GCAGC 4 cut(s) 12, 175, 860, 905
BstX2I RGATCY 2 cut(s) 820, 931
BstYI RGATCY 2 cut(s) 820, 931
BsuRI GGCC 4 cut(s) 56, 182, 219, 641
BtsCI GGATG 1 cut(s) 661
BtsI GCAGTG 1 cut(s) 657
BtsIMutI CAGTG 2 cut(s) 276, 657
Cfr13I GGNCC 3 cut(s) 54, 86, 218
CseI GACGC 1 cut(s) 28
Csp6I GTAC 1 cut(s) 1048
CviAII CATG 7 cut(s) 7, 22, 284, 305, 333, 559, 647
CviQI GTAC 1 cut(s) 1048
DdeI CTNAG 5 cut(s) 102, 147, 158, 177, 1203
DpnI GATC 5 cut(s) 93, 680, 767, 822, 933
DpnII GATC 5 cut(s) 91, 678, 765, 820, 931
Eam1104I CTCTTC 4 cut(s) 570, 803, 867, 1110
EarI CTCTTC 4 cut(s) 570, 803, 867, 1110
Eco147I AGGCCT 1 cut(s) 182
Eco32I GATATC 1 cut(s) 564
Eco47I GGWCC 1 cut(s) 86
Eco57I CTGAAG 2 cut(s) 413, 728
Eco88I CYCGRG 1 cut(s) 434
EcoRII CCWGG 1 cut(s) 636
EcoRV GATATC 1 cut(s) 564
EcoT22I ATGCAT 1 cut(s) 775
FaeI CATG 7 cut(s) 10, 25, 287, 308, 336, 562, 650
FatI CATG 7 cut(s) 6, 21, 283, 304, 332, 558, 646
FauNDI CATATG 1 cut(s) 516
FbaI TGATCA 1 cut(s) 765
Fnu4HI GCNGC 7 cut(s) 26, 57, 114, 189, 849, 894, 1211
FokI GGATG 1 cut(s) 668
Fsp4HI GCNGC 7 cut(s) 26, 57, 114, 189, 849, 894, 1211
FspBI CTAG 2 cut(s) 1073, 1136
GluI GCNGC 7 cut(s) 26, 57, 114, 189, 849, 894, 1211
GsuI CTGGAG 3 cut(s) 252, 401, 620
HaeIII GGCC 4 cut(s) 56, 182, 219, 641
HapII CCGG 1 cut(s) 192
HgaI GACGC 1 cut(s) 28
Hin1II CATG 7 cut(s) 10, 25, 287, 308, 336, 562, 650
HincII GTYRAC 3 cut(s) 127, 994, 1198
HindII GTYRAC 3 cut(s) 127, 994, 1198
HindIII AAGCTT 1 cut(s) 425
HinfI GANTC 6 cut(s) 195, 325, 749, 919, 943, 1164
HpaI GTTAAC 1 cut(s) 1198
HpaII CCGG 1 cut(s) 192
HphI GGTGA 3 cut(s) 817, 1049, 1069
Hpy166II GTNNAC 3 cut(s) 127, 994, 1198
Hpy188I TCNGA 2 cut(s) 330, 694
Hpy188III TCNNGA 6 cut(s) 89, 436, 746, 824, 935, 952
Hpy8I GTNNAC 3 cut(s) 127, 994, 1198
Hpy99I CGWCG 2 cut(s) 122, 125
HpyAV CCTTC 4 cut(s) 163, 358, 969, 1138
HpyCH4III ACNGT 2 cut(s) 131, 686
HpyCH4IV ACGT 2 cut(s) 96, 778
HpyCH4V TGCA 6 cut(s) 28, 650, 707, 773, 848, 1067
HpyF10VI GCNNNNNNNGC 5 cut(s) 31, 159, 188, 197, 647
HpyF3I CTNAG 5 cut(s) 102, 147, 158, 177, 1203
HpySE526I ACGT 2 cut(s) 96, 778
Hsp92II CATG 7 cut(s) 10, 25, 287, 308, 336, 562, 650
Ksp22I TGATCA 1 cut(s) 765
KspAI GTTAAC 1 cut(s) 1198
Kzo9I GATC 5 cut(s) 91, 678, 765, 820, 931
LguI GCTCTTC 1 cut(s) 1110
LmnI GCTCC 5 cut(s) 31, 167, 382, 538, 721
Lsp1109I GCAGC 4 cut(s) 12, 175, 860, 905
LweI GCATC 1 cut(s) 1157
MaeI CTAG 2 cut(s) 1073, 1136
MaeII ACGT 2 cut(s) 96, 778
MalI GATC 5 cut(s) 93, 680, 767, 822, 933
MboI GATC 5 cut(s) 91, 678, 765, 820, 931
MboII GAAGA 8 cut(s) 487, 514, 556, 587, 820, 884, 1013, 1127
MflI RGATCY 2 cut(s) 820, 931
MluCI AATT 6 cut(s) 253, 452, 620, 987, 1031, 1126
MlyI GAGTC 2 cut(s) 758, 1173
MmeI TCCRAC 1 cut(s) 1156
Mph1103I ATGCAT 1 cut(s) 775
MroXI GAANNNNTTC 1 cut(s) 947
MseI TTAA 2 cut(s) 1013, 1197
MslI CAYNNNNRTG 1 cut(s) 965
MspA1I CMGCKG 2 cut(s) 493, 896
MspI CCGG 1 cut(s) 192
MspR9I CCNGG 1 cut(s) 638
Mva1269I GAATGC 1 cut(s) 466
MvaI CCWGG 1 cut(s) 638
MwoI GCNNNNNNNGC 5 cut(s) 31, 159, 188, 197, 647
NdeI CATATG 1 cut(s) 516
NdeII GATC 5 cut(s) 91, 678, 765, 820, 931
NlaIII CATG 7 cut(s) 10, 25, 287, 308, 336, 562, 650
NlaIV GGNNCC 1 cut(s) 220
NsiI ATGCAT 1 cut(s) 775
NspI RCATGY 1 cut(s) 650
PaeR7I CTCGAG 1 cut(s) 434
PceI AGGCCT 1 cut(s) 182
PciSI GCTCTTC 1 cut(s) 1110
PctI GAATGC 1 cut(s) 466
PdmI GAANNNNTTC 1 cut(s) 947
PfeI GAWTC 4 cut(s) 195, 325, 919, 943
Pfl23II CGTACG 1 cut(s) 1047
PkrI GCNGC 7 cut(s) 27, 58, 115, 190, 850, 895, 1212
PleI GAGTC 2 cut(s) 757, 1172
PpsI GAGTC 2 cut(s) 757, 1172
Ppu21I YACGTR 1 cut(s) 779
Psp6I CCWGG 1 cut(s) 636
PspGI CCWGG 1 cut(s) 636
PspLI CGTACG 1 cut(s) 1047
PspN4I GGNNCC 1 cut(s) 220
PspPI GGNCC 3 cut(s) 54, 86, 218
PstI CTGCAG 1 cut(s) 30
PsuI RGATCY 2 cut(s) 820, 931
RsaI GTAC 1 cut(s) 1049
RsaNI GTAC 1 cut(s) 1048
RseI CAYNNNNRTG 1 cut(s) 965
SapI GCTCTTC 1 cut(s) 1110
SaqAI TTAA 2 cut(s) 1013, 1197
SatI GCNGC 7 cut(s) 26, 57, 114, 189, 849, 894, 1211
Sau3AI GATC 5 cut(s) 91, 678, 765, 820, 931
Sau96I GGNCC 3 cut(s) 54, 86, 218
SchI GAGTC 2 cut(s) 758, 1173
ScrFI CCNGG 1 cut(s) 638
SfaNI GCATC 1 cut(s) 1157
SfcI CTRYAG 1 cut(s) 26
Sfr274I CTCGAG 1 cut(s) 434
SinI GGWCC 1 cut(s) 86
SlaI CTCGAG 1 cut(s) 434
SmiMI CAYNNNNRTG 1 cut(s) 965
SmlI CTYRAG 1 cut(s) 434
SmoI CTYRAG 1 cut(s) 434
Sse9I AATT 6 cut(s) 253, 452, 620, 987, 1031, 1126
SseBI AGGCCT 1 cut(s) 182
SsiI CCGC 5 cut(s) 57, 114, 493, 896, 1210
SspI AATATT 1 cut(s) 863
SspMI CTAG 2 cut(s) 1073, 1136
StuI AGGCCT 1 cut(s) 182
StyD4I CCNGG 1 cut(s) 636
TaaI ACNGT 2 cut(s) 131, 686
TaiI ACGT 2 cut(s) 99, 781
TaqI TCGA 2 cut(s) 435, 825
TasI AATT 6 cut(s) 253, 452, 620, 987, 1031, 1126
TauI GCSGC 3 cut(s) 59, 116, 1213
TfiI GAWTC 4 cut(s) 195, 325, 919, 943
Tru1I TTAA 2 cut(s) 1013, 1197
Tru9I TTAA 2 cut(s) 1013, 1197
TscAI CASTG 2 cut(s) 276, 657
TseI GCWGC 4 cut(s) 25, 188, 848, 893
TspDTI ATGAA 8 cut(s) 390, 455, 533, 593, 753, 1020, 1056, 1094
TspGWI ACGGA 1 cut(s) 977
TspRI CASTG 2 cut(s) 276, 657
VpaK11BI GGWCC 1 cut(s) 86
XapI RAATTY 1 cut(s) 1126
XceI RCATGY 1 cut(s) 650
XcmI CCANNNNNNNNNTGG 1 cut(s) 649
XhoI CTCGAG 1 cut(s) 434
XmnI GAANNNNTTC 1 cut(s) 947
XspI CTAG 2 cut(s) 1073, 1136
Zsp2I ATGCAT 1 cut(s) 775
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.