Rroxscaffold_4G00313090

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000111
Physical Location & Seq
Forward (+)
36285194 .. 36286522
1329 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00313090.1

Sequence Viewer

Length: 1329 bp
ATGGAGGAGAGGATGAGAAAATGTAAAGCTAGCCGTCACAGCCTTCCGGTGGAGATCGTGGAGGATATTCTTTCACGGCTTCCGGTCAAATCCTTATGCCGTTTCAGGTGTGTTTCTAAATCATGGCGTCATTTAATTTCTGACCCGAAATTTGTCAGACTGCACCGTGATAGAGCTTTTCAGAGTGAGCATGTATTCCGTCAAAGACAAAGAGTCATTTATACCGATGGCCGCCTCACCAGTTTCCCCTTATCTAAGGAGACCAGGCCACTTTCCCTTTACTCTTTCGATCTCAATTCCAATTTTGAAACTTTTGATGAATATGATTTCGTACCCACAAAGCTGAATCGTATATTCAGTGAATTGAAACATTTTGTGATTAGCTGGGTGTCTCACTGCAATGGCTTGTTGGTGTGCAAGTTACATGGACAATTGTTCAACAAAAAGTCCAAGGAATTATTGTATATGTTTAACCCCGCAACCAGGGAATCCAAGGAATTACCTCCGCTACCAAATCTGCAGGGCAAGCGTTGTGGACATGAGCTTTATGGGTTCGGATTTGATTACTCCATTGATGATTACAAAGTAGTATGTGGGGAGATGTATGGAGATAATGGTGATGTTGTTACTGTATTCAGTGTCTATACCTTGAAAACTGGTTATTGGCGAGTGATTGAGAAGAAATTTCCCTATCGTTATACTCGTTGTCCTCTAAGTTATCGTGGGATCCTGGTGAATGGTGCTCTTCACTGGTTGATGCATAGGCCCGAAAGTCGAGATCGATCATTGGTGATTGTATCTTTCGTTCTAGCAGAGGAGGAGGTTCGAGAAATTCCATTTCCGGTATCACGTTTCACTCCTTTCAGTAACAGTATGGTACTGGGGGCCTTCAGGGAAGAGAGGCTGCTTATAACACATATTCCACCAACACTCCATAATGACATTTGGGTCATGATGGAGTATGGAAATGCAGAGTCTTGGACTGATATGGAGACCCTCATCCCGTACAGCTACTTGTCACGGTTTTGTTTCTGGGACCAATCTTGGGATTTGGTAGTGCAGCGAGAAAAGCTATCAATGTACAATTTCAATGAAAATTACTTTTGGAATCTATCAATTCGTGGAATTGGCAAAGTTGGTAGTGTTGGAATCTACTTGGAGAGCCTTGTTTCGCCAAATGATGGAGATGTTGATCCACTTCTTCAAGAGCCTACTCCTCGGAAGCCGTTGCATGATCCTTCGCAATTCAGGAGAGTGGAATTCCTTCCCACACTCGTACCAGCTTTGGATGGAGATCATAGTGCCTTTAGTTGGGATAATGATGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

442

Amino Acids

51.92

Weight (kDa)

7.62

Isoelectric Point (pI)

36.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 14 - 52 1.7e-12 F-box domain
F-box-like PF12937 14 - 50 2.8e-10 F-box-like
FBA_1 PF07734 119 - 361 1.1e-25 F-box associated beta propeller domain
b-prop_At3g26010-like PF24750 119 - 286 9.9e-09 F-box protein At3g26010-like, beta-propeller
FBA_3 PF08268 136 - 336 5.9e-16 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000111)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G06240
fragaria_vesca FvH4_1g04511 FvH4_1g04521 FvH4_1g05182 FvH4_1g05210 FvH4_1g05230 FvH4_1g05231 FvH4_1g05232 FvH4_1g05391 FvH4_1g05420 FvH4_2g41451 FvH4_3g15810 FvH4_3g15810 FvH4_3g18161 FvH4_3g19801 FvH4_3g39980 FvH4_3g39980 FvH4_3g39980 FvH4_3g39990 FvH4_3g40020 FvH4_3g40020 FvH4_3g40031 FvH4_3g40040 FvH4_4g32891 FvH4_5g33121 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g38210 FvH4_5g38211 FvH4_5g39231 FvH4_6g16940 FvH4_6g33181 FvH4_7g09411 FvH4_7g23271 FvH4_7g26741 FvH4_7g28012 FvH4_7g28013 FvH4_7g28031 FvH4_7g28041
malus_domestica MD03G1104200.v1.1 MD03G1139900.v1.1 MD03G1192800.v1.1 MD10G1202200.v1.1 MD11G1131100.v1.1 MD11G1202700.v1.1 MD11G1203000.v1.1
prunus_persica Prupe.2G163500_v2.0.a1 Prupe.4G140000_v2.0.a1 Prupe.4G140100_v2.0.a1 Prupe.4G222200_v2.0.a1 Prupe.4G236200_v2.0.a1 Prupe.4G236300_v2.0.a1 Prupe.4G236400_v2.0.a1 Prupe.4G237500_v2.0.a1 Prupe.6G125500_v2.0.a1
pyrus_communis pycom03g14510 pycom05g20120 pycom11g10840 pycom11g17520 pycom11g17590 pycom15g03310
rosa_chinensis RchiOBHm_Chr0c44g0503541 RchiOBHm_Chr2g0090931 RchiOBHm_Chr2g0090941 RchiOBHm_Chr2g0090951 RchiOBHm_Chr2g0090961 RchiOBHm_Chr2g0092791 RchiOBHm_Chr2g0099041 RchiOBHm_Chr2g0169971 RchiOBHm_Chr2g0170021 RchiOBHm_Chr4g0386131 RchiOBHm_Chr4g0386141 RchiOBHm_Chr4g0386161 RchiOBHm_Chr4g0386281 RchiOBHm_Chr4g0386291 RchiOBHm_Chr4g0440811 RchiOBHm_Chr5g0026601 RchiOBHm_Chr5g0026621 RchiOBHm_Chr5g0026871 RchiOBHm_Chr5g0072021 RchiOBHm_Chr5g0072031 RchiOBHm_Chr5g0072171 RchiOBHm_Chr5g0072181 RchiOBHm_Chr7g0231281 RchiOBHm_Chr7g0231301 RchiOBHm_Chr7g0240141
rosa_laevigata RLG00000000695 RLG00000001421 RLG00000004300 RLG00000006148 RLG00000006151 RLG00000016157 RLG00000016158 RLG00000016159 RLG00000016160 RLG00000016161 RLG00000020474 RLG00000021915 RLG00000029159 RLG00000032939 RLG00000032940 RLG00000032966 RLG00000036270 RLG00000036272 RLG00000036280 RLG00000036284
rosa_multiflora Rmu_co8434269.1_g000001 Rmu_sc0000792.1_g000017 Rmu_sc0000792.1_g000018 Rmu_sc0000792.1_g000019 Rmu_sc0001132.1_g000008 Rmu_sc0001152.1_g000004 Rmu_sc0001152.1_g000033 Rmu_sc0001583.1_g000004 Rmu_sc0003305.1_g000001 Rmu_sc0003333.1_g000005 Rmu_sc0003396.1_g000010 Rmu_sc0003396.1_g000011 Rmu_sc0003396.1_g000017 Rmu_sc0004571.1_g000004 Rmu_sc0004851.1_g000003 Rmu_sc0004851.1_g000004 Rmu_sc0005008.1_g000015 Rmu_sc0006854.1_g000016 Rmu_sc0006854.1_g000023 Rmu_sc0009422.1_g000009 Rmu_sc0010610.1_g000003 Rmu_sc0018952.1_g000008 Rmu_sc0037136.1_g000001 Rmu_ssc0000172.1_g000016 Rmu_ssc0000389.1_g000005
rosa_roxburghii Rroxscaffold_1G00009050 Rroxscaffold_1G00009090 Rroxscaffold_1G00009130 Rroxscaffold_1G00009230 Rroxscaffold_1G00044650 Rroxscaffold_1G00052600 Rroxscaffold_1G00052610 Rroxscaffold_1G00052860 Rroxscaffold_1G00052880 Rroxscaffold_2G00081700 Rroxscaffold_2G00148820 Rroxscaffold_2G00150560 Rroxscaffold_2G00150570 Rroxscaffold_2G00150590 Rroxscaffold_2G00150600 Rroxscaffold_2G00150630 Rroxscaffold_2G00150730 Rroxscaffold_2G00150740 Rroxscaffold_3G00229360 Rroxscaffold_3G00262430 Rroxscaffold_4G00313090 Rroxscaffold_5G00381610
rosa_rugosa Rorug01G0285600 Rorug02G0011200 Rorug02G0011300 Rorug02G0011400 Rorug02G0012500 Rorug02G0012600 Rorug02G0012700 Rorug02G0029300 Rorug02G0075800 Rorug02G0075900 Rorug02G0419600 Rorug02G0544800 Rorug04G0112200 Rorug05G0094100 Rorug05G0094100 Rorug05G0094200 Rorug05G0415900 Rorug05G0415900 Rorug05G0416000 Rorug05G0416100 Rorug05G0416200 Rorug05G0416300 Rorug05G0416700 Rorug05G0416800 Rorug07G0265700 Rorug07G0265800 Rorug07G0265900 Rorug07G0266000 Rorug07G0266100
rosa_samantha Rh2AG057300 Rh2AG057400 Rh2AG058700 Rh2AG478800 Rh2AG616800 Rh2DG056700 Rh2DG056800 Rh2DG056900 Rh2DG073500 Rh2DG129700 Rh2DG639800 Rh4AG380100 Rh4DG386700 Rh5AG187500 Rh5AG187700 Rh5AG189200 Rh5AG472100 Rh5AG472800 Rh5BG184000 Rh5BG184200 Rh5BG185800 Rh5BG186500 Rh5CG204000 Rh5CG205800 Rh5DG186300 Rh5DG186500 Rh5DG188100 Rh5DG503500 Rh5DG503700 Rh5DG504000 Rh5DG504100 Rh5DG504700 Rh5DG504900 Rh5DG505000 Rh7AG419500 Rh7AG419800 Rh7CG439300 Rh7DG413100
rosa_wichuraiana Rw0G002880 Rw1G026240 Rw2G005200 Rw2G005210 Rw2G005820 Rw2G009640 Rw5G016980 Rw5G017000 Rw5G017190 Rw5G043880 Rw7G011300 Rw7G034680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 911
AasI GACNNNNNNGTC 1 cut(s) 947
AccB7I CCANNNNNTGG 1 cut(s) 1181
AciI CCGC 3 cut(s) 232, 477, 506
AclWI GGATC 4 cut(s) 721, 734, 1187, 1229
AcoI YGGCCR 1 cut(s) 229
AcsI RAATTY 4 cut(s) 149, 683, 831, 1259
AcuI CTGAAG 1 cut(s) 874
AcyI GRCGYC 1 cut(s) 127
AfaI GTAC 5 cut(s) 333, 879, 1007, 1082, 1278
AfiI CCNNNNNNNGG 5 cut(s) 49, 483, 1045, 1181, 1311
AgsI TTSAA 6 cut(s) 308, 367, 439, 652, 1090, 1205
AhdI GACNNNNNGTC 1 cut(s) 212
AjnI CCWGG 3 cut(s) 263, 482, 729
AluBI AGCT 8 cut(s) 29, 176, 343, 384, 544, 1011, 1072, 1283
AluI AGCT 8 cut(s) 29, 176, 343, 384, 544, 1011, 1072, 1283
Alw21I GWGCWC 1 cut(s) 745
Alw26I GTCTC 3 cut(s) 254, 396, 986
AlwI GGATC 4 cut(s) 721, 734, 1187, 1229
AoxI GGCC 4 cut(s) 229, 266, 764, 885
ApeKI GCWGC 2 cut(s) 904, 1060
ApoI RAATTY 4 cut(s) 149, 683, 831, 1259
ArsI GACNNNNNNTTYG 2 cut(s) 134, 166
Asp700I GAANNNNTTC 1 cut(s) 1263
AspS9I GGNCC 3 cut(s) 765, 885, 1036
AsuHPI GGTGA 4 cut(s) 229, 629, 745, 802
AsuNHI GCTAGC 1 cut(s) 29
AvaII GGWCC 1 cut(s) 1036
BaeI ACNNNNGTAYC 2 cut(s) 1260, 1293
BamHI GGATCC 1 cut(s) 726
Bbv12I GWGCWC 1 cut(s) 745
BbvI GCAGC 2 cut(s) 891, 1072
BccI CCATC 4 cut(s) 221, 949, 1175, 1283
BceAI ACGGC 4 cut(s) 18, 84, 92, 1210
BciT130I CCWGG 3 cut(s) 265, 484, 731
BcoDI GTCTC 3 cut(s) 254, 396, 986
BfaI CTAG 2 cut(s) 30, 809
BfmI CTRYAG 1 cut(s) 518
BisI GCNGC 3 cut(s) 232, 905, 1061
BlsI GCNGC 3 cut(s) 233, 906, 1062
Bme1390I CCNGG 3 cut(s) 265, 484, 731
Bme18I GGWCC 1 cut(s) 1036
BmeRI GACNNNNNGTC 1 cut(s) 212
BmgT120I GGNCC 3 cut(s) 765, 885, 1036
BmiI GGNNCC 3 cut(s) 728, 886, 1037
BmrFI CCNGG 3 cut(s) 265, 484, 731
BmrI ACTGGG 1 cut(s) 890
BmsI GCATC 1 cut(s) 747
BmtI GCTAGC 1 cut(s) 33
BmuI ACTGGG 1 cut(s) 890
Bsa29I ATCGAT 1 cut(s) 781
BsaBI GATNNNNATC 2 cut(s) 1191, 1293
BsaHI GRCGYC 1 cut(s) 127
BsaI GGTCTC 2 cut(s) 254, 986
BsaJI CCNNGG 4 cut(s) 450, 483, 492, 1217
BsaWI WCCGGW 3 cut(s) 46, 82, 841
BsaXI ACNNNNNCTCC 2 cut(s) 915, 945
Bsc4I CCNNNNNNNGG 5 cut(s) 49, 483, 1045, 1181, 1311
Bse1I ACTGG 4 cut(s) 240, 661, 755, 885
Bse3DI GCAATG 1 cut(s) 406
Bse8I GATNNNNATC 2 cut(s) 1191, 1293
BseBI CCWGG 3 cut(s) 265, 484, 731
BseCI ATCGAT 1 cut(s) 781
BseDI CCNNGG 4 cut(s) 450, 483, 492, 1217
BseGI GGATG 3 cut(s) 18, 999, 1294
BseJI GATNNNNATC 2 cut(s) 1191, 1293
BseLI CCNNNNNNNGG 5 cut(s) 49, 483, 1045, 1181, 1311
BseMI GCAATG 1 cut(s) 406
BseNI ACTGG 4 cut(s) 240, 661, 755, 885
BseRI GAGGAG 4 cut(s) 20, 830, 833, 1206
BseXI GCAGC 2 cut(s) 891, 1072
BseYI CCCAGC 1 cut(s) 384
BsgI GTGCAG 2 cut(s) 146, 1079
BshFI GGCC 4 cut(s) 231, 268, 766, 887
BshVI ATCGAT 1 cut(s) 781
BsiHKAI GWGCWC 1 cut(s) 745
BsiSI CCGG 3 cut(s) 47, 83, 842
BslFI GGGAC 1 cut(s) 1049
BslI CCNNNNNNNGG 5 cut(s) 49, 483, 1045, 1181, 1311
BsmAI GTCTC 3 cut(s) 254, 396, 986
BsmFI GGGAC 1 cut(s) 1049
BsnI GGCC 4 cut(s) 231, 268, 766, 887
Bso31I GGTCTC 2 cut(s) 254, 986
Bsp1286I GDGCHC 1 cut(s) 745
Bsp1407I TGTACA 1 cut(s) 1080
Bsp143I GATC 8 cut(s) 54, 289, 726, 778, 782, 1192, 1234, 1294
BspACI CCGC 3 cut(s) 232, 477, 506
BspANI GGCC 4 cut(s) 231, 268, 766, 887
BspDI ATCGAT 1 cut(s) 781
BspHI TCATGA 1 cut(s) 951
BspLI GGNNCC 3 cut(s) 728, 886, 1037
BspMAI CTGCAG 1 cut(s) 522
BspOI GCTAGC 1 cut(s) 33
BspPI GGATC 4 cut(s) 721, 734, 1187, 1229
BspQI GCTCTTC 1 cut(s) 750
BspTNI GGTCTC 2 cut(s) 254, 986
BsrDI GCAATG 1 cut(s) 406
BsrGI TGTACA 1 cut(s) 1080
BsrI ACTGG 4 cut(s) 240, 661, 755, 885
BssECI CCNNGG 4 cut(s) 450, 483, 492, 1217
BssMI GATC 8 cut(s) 54, 289, 726, 778, 782, 1192, 1234, 1294
BssNI GRCGYC 1 cut(s) 127
BssT1I CCWWGG 2 cut(s) 450, 492
Bst2UI CCWGG 3 cut(s) 265, 484, 731
Bst4CI ACNGT 4 cut(s) 167, 631, 872, 1023
Bst6I CTCTTC 2 cut(s) 750, 891
BstACI GRCGYC 1 cut(s) 127
BstAUI TGTACA 1 cut(s) 1080
BstC8I GCNNGC 2 cut(s) 31, 527
BstDEI CTNAG 2 cut(s) 255, 713
BstF5I GGATG 3 cut(s) 18, 999, 1294
BstKTI GATC 8 cut(s) 57, 292, 729, 781, 785, 1195, 1237, 1297
BstMAI GTCTC 3 cut(s) 254, 396, 986
BstMBI GATC 8 cut(s) 54, 289, 726, 778, 782, 1192, 1234, 1294
BstMWI GCNNNNNNNGC 3 cut(s) 39, 526, 1069
BstNI CCWGG 3 cut(s) 265, 484, 731
BstNSI RCATGY 1 cut(s) 194
BstSCI CCNGG 3 cut(s) 263, 482, 729
BstSFI CTRYAG 1 cut(s) 518
BstV1I GCAGC 2 cut(s) 891, 1072
BstX2I RGATCY 1 cut(s) 726
BstYI RGATCY 1 cut(s) 726
Bsu15I ATCGAT 1 cut(s) 781
BsuRI GGCC 4 cut(s) 231, 268, 766, 887
BsuTUI ATCGAT 1 cut(s) 781
BtsCI GGATG 3 cut(s) 18, 999, 1294
BtsI GCAGTG 1 cut(s) 394
BtsIMutI CAGTG 4 cut(s) 364, 394, 643, 748
Cac8I GCNNGC 2 cut(s) 31, 527
CciI TCATGA 1 cut(s) 951
Cfr13I GGNCC 3 cut(s) 765, 885, 1036
ClaI ATCGAT 1 cut(s) 781
CseI GACGC 1 cut(s) 116
Csp6I GTAC 5 cut(s) 332, 878, 1006, 1081, 1277
CspCI CAANNNNNGTGG 2 cut(s) 514, 549
CviAII CATG 6 cut(s) 123, 191, 425, 539, 952, 1232
CviQI GTAC 5 cut(s) 332, 878, 1006, 1081, 1277
DdeI CTNAG 2 cut(s) 255, 713
DpnI GATC 8 cut(s) 56, 291, 728, 780, 784, 1194, 1236, 1296
DpnII GATC 8 cut(s) 54, 289, 726, 778, 782, 1192, 1234, 1294
DrdI GACNNNNNNGTC 1 cut(s) 947
DriI GACNNNNNGTC 1 cut(s) 212
DseDI GACNNNNNNGTC 1 cut(s) 947
EaeI YGGCCR 1 cut(s) 229
Eam1104I CTCTTC 2 cut(s) 750, 891
Eam1105I GACNNNNNGTC 1 cut(s) 212
EarI CTCTTC 2 cut(s) 750, 891
Eco130I CCWWGG 2 cut(s) 450, 492
Eco31I GGTCTC 2 cut(s) 254, 986
Eco47I GGWCC 1 cut(s) 1036
Eco57I CTGAAG 1 cut(s) 874
EcoO109I RGGNCCY 1 cut(s) 885
EcoRI GAATTC 1 cut(s) 1259
EcoRII CCWGG 3 cut(s) 263, 482, 729
EcoT14I CCWWGG 2 cut(s) 450, 492
EcoT22I ATGCAT 1 cut(s) 762
ErhI CCWWGG 2 cut(s) 450, 492
FaeI CATG 6 cut(s) 126, 194, 428, 542, 955, 1235
FaqI GGGAC 1 cut(s) 1049
FatI CATG 6 cut(s) 122, 190, 424, 538, 951, 1231
FauI CCCGC 1 cut(s) 484
Fnu4HI GCNGC 3 cut(s) 232, 905, 1061
FokI GGATG 3 cut(s) 25, 986, 1301
Fsp4HI GCNGC 3 cut(s) 232, 905, 1061
FspBI CTAG 2 cut(s) 30, 809
GluI GCNGC 3 cut(s) 232, 905, 1061
GsaI CCCAGC 1 cut(s) 388
HaeIII GGCC 4 cut(s) 231, 268, 766, 887
HapII CCGG 3 cut(s) 47, 83, 842
HgaI GACGC 1 cut(s) 116
Hin1I GRCGYC 1 cut(s) 127
Hin1II CATG 6 cut(s) 126, 194, 428, 542, 955, 1235
HinfI GANTC 6 cut(s) 213, 346, 488, 974, 1108, 1149
HpaII CCGG 3 cut(s) 47, 83, 842
HphI GGTGA 4 cut(s) 229, 629, 745, 802
Hpy166II GTNNAC 1 cut(s) 536
Hpy188I TCNGA 5 cut(s) 142, 158, 183, 557, 1221
Hpy188III TCNNGA 5 cut(s) 776, 827, 952, 1205, 1249
Hpy8I GTNNAC 1 cut(s) 536
HpyAV CCTTC 4 cut(s) 53, 898, 1248, 1274
HpyCH4III ACNGT 4 cut(s) 167, 631, 872, 1023
HpyCH4IV ACGT 1 cut(s) 850
HpyCH4V TGCA 8 cut(s) 163, 399, 417, 520, 760, 971, 1060, 1231
HpyF10VI GCNNNNNNNGC 3 cut(s) 39, 526, 1069
HpyF3I CTNAG 2 cut(s) 255, 713
HpySE526I ACGT 1 cut(s) 850
Hsp92I GRCGYC 1 cut(s) 127
Hsp92II CATG 6 cut(s) 126, 194, 428, 542, 955, 1235
Kzo9I GATC 8 cut(s) 54, 289, 726, 778, 782, 1192, 1234, 1294
LguI GCTCTTC 1 cut(s) 750
Lsp1109I GCAGC 2 cut(s) 891, 1072
LweI GCATC 1 cut(s) 747
MaeI CTAG 2 cut(s) 30, 809
MaeII ACGT 1 cut(s) 850
MaeIII GTNAC 5 cut(s) 35, 420, 625, 866, 1017
MalI GATC 8 cut(s) 56, 291, 728, 780, 784, 1194, 1236, 1296
MboI GATC 8 cut(s) 54, 289, 726, 778, 782, 1192, 1234, 1294
MboII GAAGA 4 cut(s) 691, 737, 908, 1193
MfeI CAATTG 1 cut(s) 431
MflI RGATCY 1 cut(s) 726
MhlI GDGCHC 1 cut(s) 745
MlyI GAGTC 2 cut(s) 222, 983
MmeI TCCRAC 1 cut(s) 1126
Mph1103I ATGCAT 1 cut(s) 762
MroXI GAANNNNTTC 1 cut(s) 1263
MseI TTAA 2 cut(s) 134, 471
MslI CAYNNNNRTG 1 cut(s) 399
MspI CCGG 3 cut(s) 47, 83, 842
MspR9I CCNGG 3 cut(s) 265, 484, 731
MunI CAATTG 1 cut(s) 431
MvaI CCWGG 3 cut(s) 265, 484, 731
MwoI GCNNNNNNNGC 3 cut(s) 39, 526, 1069
NdeII GATC 8 cut(s) 54, 289, 726, 778, 782, 1192, 1234, 1294
NheI GCTAGC 1 cut(s) 29
NlaIII CATG 6 cut(s) 126, 194, 428, 542, 955, 1235
NlaIV GGNNCC 3 cut(s) 728, 886, 1037
NmuCI GTSAC 2 cut(s) 35, 1017
NsiI ATGCAT 1 cut(s) 762
NspI RCATGY 1 cut(s) 194
PagI TCATGA 1 cut(s) 951
PciSI GCTCTTC 1 cut(s) 750
PcsI WCGNNNNNNNCGW 1 cut(s) 700
PdmI GAANNNNTTC 1 cut(s) 1263
PfeI GAWTC 4 cut(s) 346, 488, 1108, 1149
PflMI CCANNNNNTGG 1 cut(s) 1181
PkrI GCNGC 3 cut(s) 233, 906, 1062
PleI GAGTC 2 cut(s) 221, 982
PpsI GAGTC 2 cut(s) 221, 982
PsiI TTATAA 1 cut(s) 911
Psp6I CCWGG 3 cut(s) 263, 482, 729
PspFI CCCAGC 1 cut(s) 384
PspGI CCWGG 3 cut(s) 263, 482, 729
PspN4I GGNNCC 3 cut(s) 728, 886, 1037
PspPI GGNCC 3 cut(s) 765, 885, 1036
PsrI GAACNNNNNNTAC 2 cut(s) 789, 821
PstI CTGCAG 1 cut(s) 522
PsuI RGATCY 1 cut(s) 726
RsaI GTAC 5 cut(s) 333, 879, 1007, 1082, 1278
RsaNI GTAC 5 cut(s) 332, 878, 1006, 1081, 1277
RseI CAYNNNNRTG 1 cut(s) 399
SapI GCTCTTC 1 cut(s) 750
SaqAI TTAA 2 cut(s) 134, 471
SatI GCNGC 3 cut(s) 232, 905, 1061
Sau3AI GATC 8 cut(s) 54, 289, 726, 778, 782, 1192, 1234, 1294
Sau96I GGNCC 3 cut(s) 765, 885, 1036
SchI GAGTC 2 cut(s) 222, 983
ScrFI CCNGG 3 cut(s) 265, 484, 731
SduI GDGCHC 1 cut(s) 745
SfaNI GCATC 1 cut(s) 747
SfcI CTRYAG 1 cut(s) 518
SinI GGWCC 1 cut(s) 1036
SmiMI CAYNNNNRTG 1 cut(s) 399
SsiI CCGC 3 cut(s) 232, 477, 506
SspMI CTAG 2 cut(s) 30, 809
StyD4I CCNGG 3 cut(s) 263, 482, 729
StyI CCWWGG 2 cut(s) 450, 492
TaaI ACNGT 4 cut(s) 167, 631, 872, 1023
TaiI ACGT 1 cut(s) 853
TaqI TCGA 4 cut(s) 288, 775, 781, 826
TatI WGTACW 1 cut(s) 1080
TauI GCSGC 1 cut(s) 234
TfiI GAWTC 4 cut(s) 346, 488, 1108, 1149
Tru1I TTAA 2 cut(s) 134, 471
Tru9I TTAA 2 cut(s) 134, 471
TscAI CASTG 4 cut(s) 364, 401, 643, 755
TseFI GTSAC 2 cut(s) 35, 1017
TseI GCWGC 2 cut(s) 904, 1060
Tsp45I GTSAC 2 cut(s) 35, 1017
TspDTI ATGAA 2 cut(s) 333, 1107
TspGWI ACGGA 1 cut(s) 188
TspRI CASTG 4 cut(s) 364, 401, 643, 755
Van91I CCANNNNNTGG 1 cut(s) 1181
VpaK11BI GGWCC 1 cut(s) 1036
XapI RAATTY 4 cut(s) 149, 683, 831, 1259
XceI RCATGY 1 cut(s) 194
XmnI GAANNNNTTC 1 cut(s) 1263
XspI CTAG 2 cut(s) 30, 809
Zsp2I ATGCAT 1 cut(s) 762
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.