Rh5AG472100

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0000111
Physical Location & Seq
Reverse (-)
80932900 .. 80934997
2098 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG472100.1

Sequence Viewer

Length: 1251 bp
ATGAAATGGGCTTCATTCTTTGAAATAATCATGGGCTCGAGTTCGGCTCTCGGCTCAATCCAAACTCATCTCAAACTCAGAAGTCGGAACCAGGAGGAGTGTTGGACTAGTGTGAAGAATCAGACAGAAATGGCGGACCAAAAGAAACAGATGCGACTCCCAAACCTCCCCACGGAGGTCATACGCGAGATTCTTGGGTGGCTTCCGGTGAAATCCCTATGCCGATTCAGGTGTGTATCAAACACATGGCTCTCTCTAATCTCTGGATCCCACTTCGTGAATTCCCACTTCAACAAAGCCTTTGAGCATGAACATGTCTTCTACCAAAGACGAAGAGTCCTAATTAGAGATGCTTGGCTATGCCGCCTTTTCAGTATCAACCTTGATGAGTGTCTCAATCACACAAATATTGACGATGTTGGTGATGATGTTTTAGTTGTACCCACTCAACTCAAGCGTCGTAGATTTACTAAGTTCGTGTTTTCCTGCAATGGGTTGTTGTTGTTGAAGTCGTATTATGTGTTTTATTTGTTAAACCCTGCAACCAAGGAAACCAAGATAGTACCAAACCCACCAGAGCTATATATGTGGTCTAATGAGCTGTATGGGTTTGGATTTGATCTGTCCAGTCTAGATTACAAGGTGGTTCAGGGCGAGTTCTTTGAATTTGATCTTGGGTTTAGTGTTTATTCATTGAAAACCGGGTCTTGGCGAGCGATTGAGAAGCGATATCCCTATGAAAGTTTACAGTCTGGTATGCAGGGGAGACTGCTGAATGGGAGTATTCACTGGTTGGTTTGTAGAAACTACAATGATGTGCCATCCATGGTTCTCTTGTATTTTGTTTTAGCAGACGAGGAAGTGCAAGAGATTCCACTACCGCCTGATTTCCTTGTTGATTTCAACATTGAAGATGAAACGTATTTTCTCGACGTGTTCCAGGAATGCCTGTGTGTGGGAAAGAATGATGCTTTTGAGTTTTGGGTCATGAAGGAATACGGAGTGATGAAATCTTGGACTAAAATAAGCATCTCCTTTCCATGTACTGAAGGGCTACATTCTGGTTTCATGAAGAAAAATCAGCATCTGTTGCTGGATTTGCACCAACACCGTCTGGTCATGTACAATTTTGATGATGGAAGCTCTCGAAATCTTTCAGTTGGGAAAAGTTCCAATGTTGATTTTGTTGGGTGCTACTTGGAGAGCCTTGTTTCTCCTAATCACTACCATATGACTGTTGGAGAACATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

416

Amino Acids

48.53

Weight (kDa)

6.17

Isoelectric Point (pI)

46.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 53 - 92 5.3e-11 F-box domain
F-box-like PF12937 54 - 89 6.4e-07 F-box-like
FBA_3 PF08268 154 - 348 2.4e-12 F-box associated beta propeller domain
b-prop_At3g26010-like PF24750 157 - 296 5.5e-06 F-box protein At3g26010-like, beta-propeller
FBA_1 PF07734 158 - 405 5e-21 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000111)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G06240
fragaria_vesca FvH4_1g04511 FvH4_1g04521 FvH4_1g05182 FvH4_1g05210 FvH4_1g05230 FvH4_1g05231 FvH4_1g05232 FvH4_1g05391 FvH4_1g05420 FvH4_2g41451 FvH4_3g15810 FvH4_3g15810 FvH4_3g18161 FvH4_3g19801 FvH4_3g39980 FvH4_3g39980 FvH4_3g39980 FvH4_3g39990 FvH4_3g40020 FvH4_3g40020 FvH4_3g40031 FvH4_3g40040 FvH4_4g32891 FvH4_5g33121 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g38210 FvH4_5g38211 FvH4_5g39231 FvH4_6g16940 FvH4_6g33181 FvH4_7g09411 FvH4_7g23271 FvH4_7g26741 FvH4_7g28012 FvH4_7g28013 FvH4_7g28031 FvH4_7g28041
malus_domestica MD03G1104200.v1.1 MD03G1139900.v1.1 MD03G1192800.v1.1 MD10G1202200.v1.1 MD11G1131100.v1.1 MD11G1202700.v1.1 MD11G1203000.v1.1
prunus_persica Prupe.2G163500_v2.0.a1 Prupe.4G140000_v2.0.a1 Prupe.4G140100_v2.0.a1 Prupe.4G222200_v2.0.a1 Prupe.4G236200_v2.0.a1 Prupe.4G236300_v2.0.a1 Prupe.4G236400_v2.0.a1 Prupe.4G237500_v2.0.a1 Prupe.6G125500_v2.0.a1
pyrus_communis pycom03g14510 pycom05g20120 pycom11g10840 pycom11g17520 pycom11g17590 pycom15g03310
rosa_chinensis RchiOBHm_Chr0c44g0503541 RchiOBHm_Chr2g0090931 RchiOBHm_Chr2g0090941 RchiOBHm_Chr2g0090951 RchiOBHm_Chr2g0090961 RchiOBHm_Chr2g0092791 RchiOBHm_Chr2g0099041 RchiOBHm_Chr2g0169971 RchiOBHm_Chr2g0170021 RchiOBHm_Chr4g0386131 RchiOBHm_Chr4g0386141 RchiOBHm_Chr4g0386161 RchiOBHm_Chr4g0386281 RchiOBHm_Chr4g0386291 RchiOBHm_Chr4g0440811 RchiOBHm_Chr5g0026601 RchiOBHm_Chr5g0026621 RchiOBHm_Chr5g0026871 RchiOBHm_Chr5g0072021 RchiOBHm_Chr5g0072031 RchiOBHm_Chr5g0072171 RchiOBHm_Chr5g0072181 RchiOBHm_Chr7g0231281 RchiOBHm_Chr7g0231301 RchiOBHm_Chr7g0240141
rosa_laevigata RLG00000000695 RLG00000001421 RLG00000004300 RLG00000006148 RLG00000006151 RLG00000016157 RLG00000016158 RLG00000016159 RLG00000016160 RLG00000016161 RLG00000020474 RLG00000021915 RLG00000029159 RLG00000032939 RLG00000032940 RLG00000032966 RLG00000036270 RLG00000036272 RLG00000036280 RLG00000036284
rosa_multiflora Rmu_co8434269.1_g000001 Rmu_sc0000792.1_g000017 Rmu_sc0000792.1_g000018 Rmu_sc0000792.1_g000019 Rmu_sc0001132.1_g000008 Rmu_sc0001152.1_g000004 Rmu_sc0001152.1_g000033 Rmu_sc0001583.1_g000004 Rmu_sc0003305.1_g000001 Rmu_sc0003333.1_g000005 Rmu_sc0003396.1_g000010 Rmu_sc0003396.1_g000011 Rmu_sc0003396.1_g000017 Rmu_sc0004571.1_g000004 Rmu_sc0004851.1_g000003 Rmu_sc0004851.1_g000004 Rmu_sc0005008.1_g000015 Rmu_sc0006854.1_g000016 Rmu_sc0006854.1_g000023 Rmu_sc0009422.1_g000009 Rmu_sc0010610.1_g000003 Rmu_sc0018952.1_g000008 Rmu_sc0037136.1_g000001 Rmu_ssc0000172.1_g000016 Rmu_ssc0000389.1_g000005
rosa_roxburghii Rroxscaffold_1G00009050 Rroxscaffold_1G00009090 Rroxscaffold_1G00009130 Rroxscaffold_1G00009230 Rroxscaffold_1G00044650 Rroxscaffold_1G00052600 Rroxscaffold_1G00052610 Rroxscaffold_1G00052860 Rroxscaffold_1G00052880 Rroxscaffold_2G00081700 Rroxscaffold_2G00148820 Rroxscaffold_2G00150560 Rroxscaffold_2G00150570 Rroxscaffold_2G00150590 Rroxscaffold_2G00150600 Rroxscaffold_2G00150630 Rroxscaffold_2G00150730 Rroxscaffold_2G00150740 Rroxscaffold_3G00229360 Rroxscaffold_3G00262430 Rroxscaffold_4G00313090 Rroxscaffold_5G00381610
rosa_rugosa Rorug01G0285600 Rorug02G0011200 Rorug02G0011300 Rorug02G0011400 Rorug02G0012500 Rorug02G0012600 Rorug02G0012700 Rorug02G0029300 Rorug02G0075800 Rorug02G0075900 Rorug02G0419600 Rorug02G0544800 Rorug04G0112200 Rorug05G0094100 Rorug05G0094100 Rorug05G0094200 Rorug05G0415900 Rorug05G0415900 Rorug05G0416000 Rorug05G0416100 Rorug05G0416200 Rorug05G0416300 Rorug05G0416700 Rorug05G0416800 Rorug07G0265700 Rorug07G0265800 Rorug07G0265900 Rorug07G0266000 Rorug07G0266100
rosa_samantha Rh2AG057300 Rh2AG057400 Rh2AG058700 Rh2AG478800 Rh2AG616800 Rh2DG056700 Rh2DG056800 Rh2DG056900 Rh2DG073500 Rh2DG129700 Rh2DG639800 Rh4AG380100 Rh4DG386700 Rh5AG187500 Rh5AG187700 Rh5AG189200 Rh5AG472100 Rh5AG472800 Rh5BG184000 Rh5BG184200 Rh5BG185800 Rh5BG186500 Rh5CG204000 Rh5CG205800 Rh5DG186300 Rh5DG186500 Rh5DG188100 Rh5DG503500 Rh5DG503700 Rh5DG504000 Rh5DG504100 Rh5DG504700 Rh5DG504900 Rh5DG505000 Rh7AG419500 Rh7AG419800 Rh7CG439300 Rh7DG413100
rosa_wichuraiana Rw0G002880 Rw1G026240 Rw2G005200 Rw2G005210 Rw2G005820 Rw2G009640 Rw5G016980 Rw5G017000 Rw5G017190 Rw5G043880 Rw7G011300 Rw7G034680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 186
AciI CCGC 3 cut(s) 134, 364, 881
AclWI GGATC 2 cut(s) 261, 274
AcsI RAATTY 2 cut(s) 280, 665
AcuI CTGAAG 1 cut(s) 1068
AdeI CACNNNGTG 1 cut(s) 277
AfaI GTAC 4 cut(s) 441, 564, 1045, 1124
AfiI CCNNNNNNNGG 5 cut(s) 172, 175, 492, 708, 955
AflIII ACRYGT 2 cut(s) 313, 933
AgsI TTSAA 7 cut(s) 23, 292, 508, 665, 697, 904, 911
AhdI GACNNNNNGTC 1 cut(s) 335
AhlI ACTAGT 1 cut(s) 107
AjiI CACGTC 1 cut(s) 934
AjnI CCWGG 2 cut(s) 90, 939
AjuI GAANNNNNNNTTGG 2 cut(s) 657, 689
AluBI AGCT 3 cut(s) 580, 601, 1143
AluI AGCT 3 cut(s) 580, 601, 1143
Alw26I GTCTC 2 cut(s) 398, 760
AlwI GGATC 2 cut(s) 261, 274
AlwNI CAGNNNCTG 1 cut(s) 1087
Ama87I CYCGRG 1 cut(s) 37
ApoI RAATTY 2 cut(s) 280, 665
Asp700I GAANNNNTTC 1 cut(s) 1153
AspS9I GGNCC 1 cut(s) 136
AsuC2I CCSGG 1 cut(s) 703
AsuHPI GGTGA 2 cut(s) 220, 434
AvaI CYCGRG 1 cut(s) 37
AvaII GGWCC 1 cut(s) 136
BamHI GGATCC 1 cut(s) 266
BanII GRGCYC 1 cut(s) 38
BbsI GAAGAC 1 cut(s) 310
BccI CCATC 2 cut(s) 829, 1130
BciT130I CCWGG 2 cut(s) 92, 941
BcnI CCSGG 1 cut(s) 703
BcoDI GTCTC 2 cut(s) 398, 760
BcuI ACTAGT 1 cut(s) 107
BfaI CTAG 2 cut(s) 108, 632
BisI GCNGC 1 cut(s) 364
BlsI GCNGC 1 cut(s) 365
Bme1390I CCNGG 3 cut(s) 92, 703, 941
Bme18I GGWCC 1 cut(s) 136
BmeRI GACNNNNNGTC 1 cut(s) 335
BmeT110I CYCGRG 1 cut(s) 37
BmgBI CACGTC 1 cut(s) 934
BmgT120I GGNCC 1 cut(s) 136
BmiI GGNNCC 2 cut(s) 89, 268
BmrFI CCNGG 3 cut(s) 92, 703, 941
BmsI GCATC 5 cut(s) 141, 340, 958, 1038, 1093
BpiI GAAGAC 1 cut(s) 310
BplI GAGNNNNNCTC 2 cut(s) 31, 63
BpuEI CTTGAG 1 cut(s) 437
BpuMI CCSGG 1 cut(s) 703
BsaJI CCNNGG 3 cut(s) 171, 546, 825
BsaWI WCCGGW 1 cut(s) 205
Bsc4I CCNNNNNNNGG 5 cut(s) 172, 175, 492, 708, 955
Bse1I ACTGG 2 cut(s) 627, 794
Bse3DI GCAATG 1 cut(s) 496
BseBI CCWGG 2 cut(s) 92, 941
BseDI CCNNGG 3 cut(s) 171, 546, 825
BseGI GGATG 1 cut(s) 821
BseLI CCNNNNNNNGG 5 cut(s) 172, 175, 492, 708, 955
BseMI GCAATG 1 cut(s) 496
BseMII CTCAG 1 cut(s) 91
BseNI ACTGG 2 cut(s) 627, 794
BseRI GAGGAG 1 cut(s) 110
Bsh1236I CGCG 1 cut(s) 186
BsiHKCI CYCGRG 1 cut(s) 37
BsiSI CCGG 2 cut(s) 206, 702
BslI CCNNNNNNNGG 5 cut(s) 172, 175, 492, 708, 955
BsmAI GTCTC 2 cut(s) 398, 760
BsmI GAATGC 1 cut(s) 950
BsoBI CYCGRG 1 cut(s) 37
Bsp1286I GDGCHC 1 cut(s) 38
Bsp1407I TGTACA 1 cut(s) 1122
Bsp143I GATC 3 cut(s) 266, 619, 670
Bsp19I CCATGG 1 cut(s) 825
BspACI CCGC 3 cut(s) 134, 364, 881
BspCNI CTCAG 1 cut(s) 90
BspFNI CGCG 1 cut(s) 186
BspHI TCATGA 2 cut(s) 987, 1068
BspLI GGNNCC 2 cut(s) 89, 268
BspPI GGATC 2 cut(s) 261, 274
BsrDI GCAATG 1 cut(s) 496
BsrGI TGTACA 1 cut(s) 1122
BsrI ACTGG 2 cut(s) 627, 794
BssECI CCNNGG 3 cut(s) 171, 546, 825
BssMI GATC 3 cut(s) 266, 619, 670
BssT1I CCWWGG 2 cut(s) 546, 825
Bst2UI CCWGG 2 cut(s) 92, 941
Bst4CI ACNGT 3 cut(s) 750, 1112, 1237
Bst6I CTCTTC 1 cut(s) 328
BstAPI GCANNNNNTGC 1 cut(s) 1090
BstAUI TGTACA 1 cut(s) 1122
BstC8I GCNNGC 1 cut(s) 714
BstDEI CTNAG 2 cut(s) 77, 471
BstDSI CCRYGG 2 cut(s) 171, 825
BstF5I GGATG 1 cut(s) 821
BstFNI CGCG 1 cut(s) 186
BstKTI GATC 3 cut(s) 269, 622, 673
BstMAI GTCTC 2 cut(s) 398, 760
BstMBI GATC 3 cut(s) 266, 619, 670
BstMWI GCNNNNNNNGC 2 cut(s) 1090, 1099
BstNI CCWGG 2 cut(s) 92, 941
BstNSI RCATGY 1 cut(s) 317
BstSCI CCNGG 3 cut(s) 90, 701, 939
BstUI CGCG 1 cut(s) 186
BstV2I GAAGAC 1 cut(s) 310
BstX2I RGATCY 1 cut(s) 266
BstYI RGATCY 1 cut(s) 266
BtgI CCRYGG 2 cut(s) 171, 825
BtrI CACGTC 1 cut(s) 934
BtsCI GGATG 1 cut(s) 821
BtsIMutI CAGTG 1 cut(s) 787
Cac8I GCNNGC 1 cut(s) 714
CaiI CAGNNNCTG 1 cut(s) 1087
CciI TCATGA 2 cut(s) 987, 1068
Cfr13I GGNCC 1 cut(s) 136
CseI GACGC 1 cut(s) 446
Csp6I GTAC 4 cut(s) 440, 563, 1044, 1123
CviAII CATG 9 cut(s) 31, 246, 308, 314, 826, 988, 1041, 1069, 1120
CviQI GTAC 4 cut(s) 440, 563, 1044, 1123
DdeI CTNAG 2 cut(s) 77, 471
DpnI GATC 3 cut(s) 268, 621, 672
DpnII GATC 3 cut(s) 266, 619, 670
DraIII CACNNNGTG 1 cut(s) 277
DriI GACNNNNNGTC 1 cut(s) 335
Eam1104I CTCTTC 1 cut(s) 328
Eam1105I GACNNNNNGTC 1 cut(s) 335
EarI CTCTTC 1 cut(s) 328
EciI GGCGGA 1 cut(s) 149
Eco130I CCWWGG 2 cut(s) 546, 825
Eco24I GRGCYC 1 cut(s) 38
Eco32I GATATC 1 cut(s) 731
Eco47I GGWCC 1 cut(s) 136
Eco57I CTGAAG 1 cut(s) 1068
Eco88I CYCGRG 1 cut(s) 37
EcoRI GAATTC 1 cut(s) 280
EcoRII CCWGG 2 cut(s) 90, 939
EcoRV GATATC 1 cut(s) 731
EcoT14I CCWWGG 2 cut(s) 546, 825
EcoT38I GRGCYC 1 cut(s) 38
ErhI CCWWGG 2 cut(s) 546, 825
FaeI CATG 9 cut(s) 34, 249, 311, 317, 829, 991, 1044, 1072, 1123
FatI CATG 9 cut(s) 30, 245, 307, 313, 825, 987, 1040, 1068, 1119
FauNDI CATATG 1 cut(s) 1230
Fnu4HI GCNGC 1 cut(s) 364
FokI GGATG 1 cut(s) 808
FriOI GRGCYC 1 cut(s) 38
Fsp4HI GCNGC 1 cut(s) 364
FspBI CTAG 2 cut(s) 108, 632
GluI GCNGC 1 cut(s) 364
HapII CCGG 2 cut(s) 206, 702
HgaI GACGC 1 cut(s) 446
Hin1II CATG 9 cut(s) 34, 249, 311, 317, 829, 991, 1044, 1072, 1123
HinfI GANTC 6 cut(s) 118, 156, 190, 225, 336, 871
HpaII CCGG 2 cut(s) 206, 702
HphI GGTGA 2 cut(s) 220, 434
Hpy166II GTNNAC 1 cut(s) 746
Hpy188I TCNGA 3 cut(s) 80, 87, 123
Hpy188III TCNNGA 7 cut(s) 264, 277, 632, 929, 988, 1069, 1146
Hpy8I GTNNAC 1 cut(s) 746
Hpy99I CGWCG 2 cut(s) 462, 935
HpyAV CCTTC 2 cut(s) 985, 1043
HpyCH4III ACNGT 3 cut(s) 750, 1112, 1237
HpyCH4IV ACGT 2 cut(s) 920, 933
HpyCH4V TGCA 5 cut(s) 489, 542, 760, 865, 1102
HpyF10VI GCNNNNNNNGC 2 cut(s) 1090, 1099
HpyF3I CTNAG 2 cut(s) 77, 471
HpySE526I ACGT 2 cut(s) 920, 933
Hsp92II CATG 9 cut(s) 34, 249, 311, 317, 829, 991, 1044, 1072, 1123
Kzo9I GATC 3 cut(s) 266, 619, 670
LweI GCATC 5 cut(s) 141, 340, 958, 1038, 1093
MaeI CTAG 2 cut(s) 108, 632
MaeII ACGT 2 cut(s) 920, 933
MalI GATC 3 cut(s) 268, 621, 672
MboI GATC 3 cut(s) 266, 619, 670
MboII GAAGA 5 cut(s) 127, 310, 345, 923, 1084
MflI RGATCY 1 cut(s) 266
MhlI GDGCHC 1 cut(s) 38
MluCI AATT 4 cut(s) 280, 342, 665, 1126
MlyI GAGTC 2 cut(s) 150, 345
MmeI TCCRAC 3 cut(s) 65, 83, 1219
MnlI CCTC 4 cut(s) 88, 169, 176, 850
MroXI GAANNNNTTC 1 cut(s) 1153
MseI TTAA 2 cut(s) 533, 1249
MslI CAYNNNNRTG 1 cut(s) 312
MspI CCGG 2 cut(s) 206, 702
MspR9I CCNGG 3 cut(s) 92, 703, 941
Mva1269I GAATGC 1 cut(s) 950
MvaI CCWGG 2 cut(s) 92, 941
MvnI CGCG 1 cut(s) 186
MwoI GCNNNNNNNGC 2 cut(s) 1090, 1099
NciI CCSGG 1 cut(s) 703
NcoI CCATGG 1 cut(s) 825
NdeI CATATG 1 cut(s) 1230
NdeII GATC 3 cut(s) 266, 619, 670
NlaIII CATG 9 cut(s) 34, 249, 311, 317, 829, 991, 1044, 1072, 1123
NlaIV GGNNCC 2 cut(s) 89, 268
NmeAIII GCCGAG 1 cut(s) 30
NspI RCATGY 1 cut(s) 317
PaeR7I CTCGAG 1 cut(s) 37
PagI TCATGA 2 cut(s) 987, 1068
PciI ACATGT 1 cut(s) 313
PctI GAATGC 1 cut(s) 950
PdmI GAANNNNTTC 1 cut(s) 1153
PfeI GAWTC 4 cut(s) 118, 190, 225, 871
PfoI TCCNGGA 1 cut(s) 939
PkrI GCNGC 1 cut(s) 365
PleI GAGTC 2 cut(s) 150, 344
PpsI GAGTC 2 cut(s) 150, 344
PscI ACATGT 1 cut(s) 313
Psp6I CCWGG 2 cut(s) 90, 939
PspGI CCWGG 2 cut(s) 90, 939
PspN4I GGNNCC 2 cut(s) 89, 268
PspPI GGNCC 1 cut(s) 136
PspXI VCTCGAGB 1 cut(s) 37
PstNI CAGNNNCTG 1 cut(s) 1087
PsuI RGATCY 1 cut(s) 266
RsaI GTAC 4 cut(s) 441, 564, 1045, 1124
RsaNI GTAC 4 cut(s) 440, 563, 1044, 1123
RseI CAYNNNNRTG 1 cut(s) 312
SaqAI TTAA 2 cut(s) 533, 1249
SatI GCNGC 1 cut(s) 364
Sau3AI GATC 3 cut(s) 266, 619, 670
Sau96I GGNCC 1 cut(s) 136
SchI GAGTC 2 cut(s) 150, 345
ScrFI CCNGG 3 cut(s) 92, 703, 941
SduI GDGCHC 1 cut(s) 38
SfaNI GCATC 5 cut(s) 141, 340, 958, 1038, 1093
Sfr274I CTCGAG 1 cut(s) 37
SinI GGWCC 1 cut(s) 136
SlaI CTCGAG 1 cut(s) 37
SmiMI CAYNNNNRTG 1 cut(s) 312
SmlI CTYRAG 2 cut(s) 37, 452
SmoI CTYRAG 2 cut(s) 37, 452
SpeI ACTAGT 1 cut(s) 107
Sse9I AATT 4 cut(s) 280, 342, 665, 1126
SsiI CCGC 3 cut(s) 134, 364, 881
SspI AATATT 1 cut(s) 409
SspMI CTAG 2 cut(s) 108, 632
StyD4I CCNGG 3 cut(s) 90, 701, 939
StyI CCWWGG 2 cut(s) 546, 825
TaaI ACNGT 3 cut(s) 750, 1112, 1237
TaiI ACGT 2 cut(s) 923, 936
TaqI TCGA 3 cut(s) 38, 930, 1147
TasI AATT 4 cut(s) 280, 342, 665, 1126
TatI WGTACW 2 cut(s) 1043, 1122
TauI GCSGC 1 cut(s) 366
TfiI GAWTC 4 cut(s) 118, 190, 225, 871
Tru1I TTAA 2 cut(s) 533, 1249
Tru9I TTAA 2 cut(s) 533, 1249
TscAI CASTG 1 cut(s) 794
TspDTI ATGAA 9 cut(s) 17, 324, 681, 753, 930, 1004, 1022, 1057, 1085
TspGWI ACGGA 2 cut(s) 188, 1014
TspRI CASTG 1 cut(s) 794
VpaK11BI GGWCC 1 cut(s) 136
XapI RAATTY 2 cut(s) 280, 665
XbaI TCTAGA 1 cut(s) 631
XceI RCATGY 1 cut(s) 317
XcmI CCANNNNNNNNNTGG 1 cut(s) 1235
XhoI CTCGAG 1 cut(s) 37
XmnI GAANNNNTTC 1 cut(s) 1153
XspI CTAG 2 cut(s) 108, 632
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.