Prupe.4G140100_v2.0.a1

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000111
Physical Location & Seq
Reverse (-)
7826975 .. 7829793
2819 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G140100.1

Sequence Viewer

Length: 1449 bp
ATGCCCCATAACTCAGCTTCCAAGACTTGTCCTACACCAAGCTTGACAGCAAAGCCTCTCATCCACTGCCCAGAACTATCTCTGAGTACACCCCCAGCAGCAATGTGTCCATCCTCACCTTTTCTGCACCCATCGAGTAGAAGAAGGAACAAGTCGAAGCGACCCAAGGTAGGAGAAGAAGGGCAGTCAGTATCAGTGGACTCACTTCACCGCCCTCGTGTTTTTCTGGGTGGCTCAGAGTTGCTTATATCTGATATCTCAGTATCAAGGGAAGTAGGCATGCCAGACCTTTCACAGGATATCATTGTAGACATACTCTCTCGACTTCGTCTGAAGTCTGTGTGTCGATTCAGGTGCGTGTCAAAGTCATGGTTCAATCTTACCACCGAACCCCACTTCATCAACACCCATCTCAACCGGCACCGGAAGAAGCAGAAAATCATTCTAAGTTCTAATAATTCCCTATTCTCCTTGGACCCTGAAGCACCTATAGATGATGATATGTTACCTTTGGAGATTGATTTTCCACTTAAGAACCATCCCAACACTGAGTGGGTTCACATGTTTGGTTCCTGTAATGGTTTGGTCTGCATCATGCCTCAGCCAGAAGTCTTCTTTATATTCAATCCTACCACTAGAGAGTCCTTGAGAGTACCAGATTGCCCCAGGCCAAGTCATATTTGTCCTCCAGAACCACAAGAAGTAATATTTCATCATGCATATAGTTTTGGTTATGCTCCTTCGATCGATGATTACAAATTTGTCAAGGTTGCTTATGGATGCATGGTACTCATTTTTTCATTGAAAAGCAGTTCATGGAAAAGGGTTCAAGACTTTCCTTACAGACATTGTTTGGAGAAGTCAGGGACGACTCTCAATGGAGCTGTCCACTGGTTATGTAGACGCCTTGAAGTTGGAGGTACCTGTGTGATTGCTGCTTTTGATTTAGCACAGGAGAAGTTCTCAGACTTGCCCCCACCTGAATCTGTCACAGATTATAAGAGATTTACAACTGGTGTTTTGAGAGGGTGTCTTTGTTTACTACACCAGCACGATAGGCGACACTCATTTTGGATTATGAACAAGTACAGGGTGAAAGAGTCTTGGACTATGATTATGATAACCGACTCATATGCTTCTATTTCTTTGAAGCCATTATGTTACTGGAAGGATACCAAGATACTACTGGCAAGGAGTTGGAAACAATTACTTCTTTGCAATCCAAATGATGGAACTTGCAAAAATTTCTTGGGAAATGGCCTTCCGGACAAATTCTGTGCTGATGTGTATGTGGAATGCCTTGTCTCTCCGAACTTATGGTTCCGAAGGAACTCGCGGTTGCGTTTAGCCCGGATTACAGTACTCTGCACATTTCTACTTCTAGTGCACATGAACTACTTGCTTCTTGTAACTGAGTTGAGCAAGTTTCTGACCAAAAAAAGCAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

483

Amino Acids

55.09

Weight (kDa)

9.09

Isoelectric Point (pI)

53.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000111)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G06240
fragaria_vesca FvH4_1g04511 FvH4_1g04521 FvH4_1g05182 FvH4_1g05210 FvH4_1g05230 FvH4_1g05231 FvH4_1g05232 FvH4_1g05391 FvH4_1g05420 FvH4_2g41451 FvH4_3g15810 FvH4_3g15810 FvH4_3g18161 FvH4_3g19801 FvH4_3g39980 FvH4_3g39980 FvH4_3g39980 FvH4_3g39990 FvH4_3g40020 FvH4_3g40020 FvH4_3g40031 FvH4_3g40040 FvH4_4g32891 FvH4_5g33121 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g38210 FvH4_5g38211 FvH4_5g39231 FvH4_6g16940 FvH4_6g33181 FvH4_7g09411 FvH4_7g23271 FvH4_7g26741 FvH4_7g28012 FvH4_7g28013 FvH4_7g28031 FvH4_7g28041
malus_domestica MD03G1104200.v1.1 MD03G1139900.v1.1 MD03G1192800.v1.1 MD10G1202200.v1.1 MD11G1131100.v1.1 MD11G1202700.v1.1 MD11G1203000.v1.1
prunus_persica Prupe.2G163500_v2.0.a1 Prupe.4G140000_v2.0.a1 Prupe.4G140100_v2.0.a1 Prupe.4G222200_v2.0.a1 Prupe.4G236200_v2.0.a1 Prupe.4G236300_v2.0.a1 Prupe.4G236400_v2.0.a1 Prupe.4G237500_v2.0.a1 Prupe.6G125500_v2.0.a1
pyrus_communis pycom03g14510 pycom05g20120 pycom11g10840 pycom11g17520 pycom11g17590 pycom15g03310
rosa_chinensis RchiOBHm_Chr0c44g0503541 RchiOBHm_Chr2g0090931 RchiOBHm_Chr2g0090941 RchiOBHm_Chr2g0090951 RchiOBHm_Chr2g0090961 RchiOBHm_Chr2g0092791 RchiOBHm_Chr2g0099041 RchiOBHm_Chr2g0169971 RchiOBHm_Chr2g0170021 RchiOBHm_Chr4g0386131 RchiOBHm_Chr4g0386141 RchiOBHm_Chr4g0386161 RchiOBHm_Chr4g0386281 RchiOBHm_Chr4g0386291 RchiOBHm_Chr4g0440811 RchiOBHm_Chr5g0026601 RchiOBHm_Chr5g0026621 RchiOBHm_Chr5g0026871 RchiOBHm_Chr5g0072021 RchiOBHm_Chr5g0072031 RchiOBHm_Chr5g0072171 RchiOBHm_Chr5g0072181 RchiOBHm_Chr7g0231281 RchiOBHm_Chr7g0231301 RchiOBHm_Chr7g0240141
rosa_laevigata RLG00000000695 RLG00000001421 RLG00000004300 RLG00000006148 RLG00000006151 RLG00000016157 RLG00000016158 RLG00000016159 RLG00000016160 RLG00000016161 RLG00000020474 RLG00000021915 RLG00000029159 RLG00000032939 RLG00000032940 RLG00000032966 RLG00000036270 RLG00000036272 RLG00000036280 RLG00000036284
rosa_multiflora Rmu_co8434269.1_g000001 Rmu_sc0000792.1_g000017 Rmu_sc0000792.1_g000018 Rmu_sc0000792.1_g000019 Rmu_sc0001132.1_g000008 Rmu_sc0001152.1_g000004 Rmu_sc0001152.1_g000033 Rmu_sc0001583.1_g000004 Rmu_sc0003305.1_g000001 Rmu_sc0003333.1_g000005 Rmu_sc0003396.1_g000010 Rmu_sc0003396.1_g000011 Rmu_sc0003396.1_g000017 Rmu_sc0004571.1_g000004 Rmu_sc0004851.1_g000003 Rmu_sc0004851.1_g000004 Rmu_sc0005008.1_g000015 Rmu_sc0006854.1_g000016 Rmu_sc0006854.1_g000023 Rmu_sc0009422.1_g000009 Rmu_sc0010610.1_g000003 Rmu_sc0018952.1_g000008 Rmu_sc0037136.1_g000001 Rmu_ssc0000172.1_g000016 Rmu_ssc0000389.1_g000005
rosa_roxburghii Rroxscaffold_1G00009050 Rroxscaffold_1G00009090 Rroxscaffold_1G00009130 Rroxscaffold_1G00009230 Rroxscaffold_1G00044650 Rroxscaffold_1G00052600 Rroxscaffold_1G00052610 Rroxscaffold_1G00052860 Rroxscaffold_1G00052880 Rroxscaffold_2G00081700 Rroxscaffold_2G00148820 Rroxscaffold_2G00150560 Rroxscaffold_2G00150570 Rroxscaffold_2G00150590 Rroxscaffold_2G00150600 Rroxscaffold_2G00150630 Rroxscaffold_2G00150730 Rroxscaffold_2G00150740 Rroxscaffold_3G00229360 Rroxscaffold_3G00262430 Rroxscaffold_4G00313090 Rroxscaffold_5G00381610
rosa_rugosa Rorug01G0285600 Rorug02G0011200 Rorug02G0011300 Rorug02G0011400 Rorug02G0012500 Rorug02G0012600 Rorug02G0012700 Rorug02G0029300 Rorug02G0075800 Rorug02G0075900 Rorug02G0419600 Rorug02G0544800 Rorug04G0112200 Rorug05G0094100 Rorug05G0094100 Rorug05G0094200 Rorug05G0415900 Rorug05G0415900 Rorug05G0416000 Rorug05G0416100 Rorug05G0416200 Rorug05G0416300 Rorug05G0416700 Rorug05G0416800 Rorug07G0265700 Rorug07G0265800 Rorug07G0265900 Rorug07G0266000 Rorug07G0266100
rosa_samantha Rh2AG057300 Rh2AG057400 Rh2AG058700 Rh2AG478800 Rh2AG616800 Rh2DG056700 Rh2DG056800 Rh2DG056900 Rh2DG073500 Rh2DG129700 Rh2DG639800 Rh4AG380100 Rh4DG386700 Rh5AG187500 Rh5AG187700 Rh5AG189200 Rh5AG472100 Rh5AG472800 Rh5BG184000 Rh5BG184200 Rh5BG185800 Rh5BG186500 Rh5CG204000 Rh5CG205800 Rh5DG186300 Rh5DG186500 Rh5DG188100 Rh5DG503500 Rh5DG503700 Rh5DG504000 Rh5DG504100 Rh5DG504700 Rh5DG504900 Rh5DG505000 Rh7AG419500 Rh7AG419800 Rh7CG439300 Rh7DG413100
rosa_wichuraiana Rw0G002880 Rw1G026240 Rw2G005200 Rw2G005210 Rw2G005820 Rw2G009640 Rw5G016980 Rw5G017000 Rw5G017190 Rw5G043880 Rw7G011300 Rw7G034680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 999
Acc65I GGTACC 1 cut(s) 920
AccB1I GGYRCC 2 cut(s) 420, 920
AccB7I CCANNNNNTGG 1 cut(s) 1229
AccI GTMKAC 2 cut(s) 309, 901
AccII CGCG 1 cut(s) 1336
AccIII TCCGGA 1 cut(s) 1264
AciI CCGC 2 cut(s) 211, 1336
AcsI RAATTY 3 cut(s) 758, 1243, 1271
AcuI CTGAAG 2 cut(s) 353, 501
AcyI GRCGYC 1 cut(s) 904
AdeI CACNNNGTG 1 cut(s) 552
AfaI GTAC 6 cut(s) 88, 654, 789, 922, 1088, 1362
AfiI CCNNNNNNNGG 3 cut(s) 170, 295, 1229
AflII CTTAAG 1 cut(s) 530
AflIII ACRYGT 1 cut(s) 561
AgsI TTSAA 6 cut(s) 376, 625, 805, 830, 911, 1150
AjnI CCWGG 1 cut(s) 665
AluBI AGCT 3 cut(s) 17, 42, 884
AluI AGCT 3 cut(s) 17, 42, 884
Alw21I GWGCWC 1 cut(s) 1389
Alw26I GTCTC 1 cut(s) 1309
Alw44I GTGCAC 1 cut(s) 1385
Aor13HI TCCGGA 1 cut(s) 1264
AoxI GGCC 2 cut(s) 668, 1258
ApaLI GTGCAC 1 cut(s) 1385
ApeKI GCWGC 2 cut(s) 98, 935
ApoI RAATTY 3 cut(s) 758, 1243, 1271
ArsI GACNNNNNNTTYG 2 cut(s) 1053, 1085
Asp718I GGTACC 1 cut(s) 920
AspS9I GGNCC 1 cut(s) 475
AsuC2I CCSGG 1 cut(s) 1351
AsuHPI GGTGA 3 cut(s) 108, 200, 1105
AvaII GGWCC 1 cut(s) 475
BaeGI GKGCMC 1 cut(s) 1389
BaeI ACNNNNGTAYC 2 cut(s) 912, 945
BanI GGYRCC 2 cut(s) 420, 920
BauI CACGAG 1 cut(s) 216
BbsI GAAGAC 1 cut(s) 604
Bbv12I GWGCWC 1 cut(s) 1389
BbvCI CCTCAGC 1 cut(s) 600
BbvI GCAGC 2 cut(s) 110, 922
BccI CCATC 5 cut(s) 118, 139, 417, 546, 1223
BcgI CGANNNNNNTGC 4 cut(s) 336, 370, 1115, 1149
BciT130I CCWGG 1 cut(s) 667
BciVI GTATCC 1 cut(s) 1165
BcnI CCSGG 1 cut(s) 1351
BcoDI GTCTC 1 cut(s) 1309
BfaI CTAG 2 cut(s) 636, 1382
BfmI CTRYAG 1 cut(s) 489
BfrI CTTAAG 1 cut(s) 530
BfuI GTATCC 1 cut(s) 1165
BisI GCNGC 2 cut(s) 99, 936
BlsI GCNGC 2 cut(s) 100, 937
BmcAI AGTACT 1 cut(s) 1362
Bme1390I CCNGG 2 cut(s) 667, 1351
Bme18I GGWCC 1 cut(s) 475
BmgT120I GGNCC 1 cut(s) 475
BmiI GGNNCC 5 cut(s) 422, 477, 571, 922, 1322
BmrFI CCNGG 2 cut(s) 667, 1351
BmsI GCATC 2 cut(s) 600, 770
BpiI GAAGAC 1 cut(s) 604
BplI GAGNNNNNCTC 2 cut(s) 947, 979
BpmI CTGGAG 1 cut(s) 672
Bpu10I CCTNAGC 1 cut(s) 600
BpuEI CTTGAG 1 cut(s) 667
BpuMI CCSGG 1 cut(s) 1351
Bsa29I ATCGAT 1 cut(s) 747
BsaHI GRCGYC 1 cut(s) 904
BsaJI CCNNGG 3 cut(s) 165, 471, 665
BsaWI WCCGGW 2 cut(s) 423, 1264
Bsc4I CCNNNNNNNGG 3 cut(s) 170, 295, 1229
Bse118I RCCGGY 1 cut(s) 417
Bse1I ACTGG 4 cut(s) 896, 1018, 1169, 1191
Bse3DI GCAATG 1 cut(s) 108
BseAI TCCGGA 1 cut(s) 1264
BseBI CCWGG 1 cut(s) 667
BseCI ATCGAT 1 cut(s) 747
BseDI CCNNGG 3 cut(s) 165, 471, 665
BseGI GGATG 4 cut(s) 60, 110, 538, 785
BseLI CCNNNNNNNGG 3 cut(s) 170, 295, 1229
BseMI GCAATG 1 cut(s) 108
BseMII CTCAG 8 cut(s) 27, 74, 249, 273, 540, 614, 978, 1404
BseNI ACTGG 4 cut(s) 896, 1018, 1169, 1191
BseSI GKGCMC 1 cut(s) 1389
BseXI GCAGC 2 cut(s) 110, 922
BseYI CCCAGC 1 cut(s) 94
BsgI GTGCAG 2 cut(s) 110, 1351
Bsh1236I CGCG 1 cut(s) 1336
Bsh1285I CGRYCG 1 cut(s) 747
BshFI GGCC 2 cut(s) 670, 1260
BshNI GGYRCC 2 cut(s) 420, 920
BshVI ATCGAT 1 cut(s) 747
BsiEI CGRYCG 1 cut(s) 747
BsiHKAI GWGCWC 1 cut(s) 1389
BsiSI CCGG 4 cut(s) 418, 424, 1265, 1351
BslFI GGGAC 1 cut(s) 880
BslI CCNNNNNNNGG 3 cut(s) 170, 295, 1229
BsmAI GTCTC 1 cut(s) 1309
BsmFI GGGAC 1 cut(s) 880
BsmI GAATGC 1 cut(s) 1301
BsnI GGCC 2 cut(s) 670, 1260
Bsp1286I GDGCHC 1 cut(s) 1389
Bsp13I TCCGGA 1 cut(s) 1264
Bsp143I GATC 1 cut(s) 744
BspACI CCGC 2 cut(s) 211, 1336
BspANI GGCC 2 cut(s) 670, 1260
BspCNI CTCAG 8 cut(s) 26, 75, 248, 272, 541, 613, 977, 1405
BspDI ATCGAT 1 cut(s) 747
BspEI TCCGGA 1 cut(s) 1264
BspFNI CGCG 1 cut(s) 1336
BspLI GGNNCC 5 cut(s) 422, 477, 571, 922, 1322
BspT107I GGYRCC 2 cut(s) 420, 920
BspTI CTTAAG 1 cut(s) 530
BsrDI GCAATG 1 cut(s) 108
BsrFI RCCGGY 1 cut(s) 417
BsrI ACTGG 4 cut(s) 896, 1018, 1169, 1191
BssAI RCCGGY 1 cut(s) 417
BssECI CCNNGG 3 cut(s) 165, 471, 665
BssMI GATC 1 cut(s) 744
BssNI GRCGYC 1 cut(s) 904
BssSI CACGAG 1 cut(s) 216
BssT1I CCWWGG 2 cut(s) 165, 471
Bst2BI CACGAG 1 cut(s) 216
Bst2UI CCWGG 1 cut(s) 667
Bst4CI ACNGT 1 cut(s) 1360
BstACI GRCGYC 1 cut(s) 904
BstAFI CTTAAG 1 cut(s) 530
BstC8I GCNNGC 1 cut(s) 281
BstDEI CTNAG 9 cut(s) 13, 83, 235, 259, 446, 549, 600, 964, 1413
BstENI CCTNNNNNAGG 1 cut(s) 293
BstF5I GGATG 4 cut(s) 60, 110, 538, 785
BstFNI CGCG 1 cut(s) 1336
BstKTI GATC 1 cut(s) 747
BstMAI GTCTC 1 cut(s) 1309
BstMBI GATC 1 cut(s) 744
BstMCI CGRYCG 1 cut(s) 747
BstMWI GCNNNNNNNGC 1 cut(s) 1057
BstNI CCWGG 1 cut(s) 667
BstNSI RCATGY 2 cut(s) 283, 565
BstSCI CCNGG 2 cut(s) 665, 1349
BstSFI CTRYAG 1 cut(s) 489
BstSLI GKGCMC 1 cut(s) 1389
BstUI CGCG 1 cut(s) 1336
BstV1I GCAGC 2 cut(s) 110, 922
BstV2I GAAGAC 1 cut(s) 604
Bsu15I ATCGAT 1 cut(s) 747
BsuI GTATCC 1 cut(s) 1165
BsuRI GGCC 2 cut(s) 670, 1260
BsuTUI ATCGAT 1 cut(s) 747
BtsCI GGATG 4 cut(s) 60, 110, 538, 785
BtsI GCAGTG 1 cut(s) 64
BtsIMutI CAGTG 4 cut(s) 64, 201, 546, 889
Cac8I GCNNGC 1 cut(s) 281
Cfr10I RCCGGY 1 cut(s) 417
Cfr13I GGNCC 1 cut(s) 475
ClaI ATCGAT 1 cut(s) 747
CseI GACGC 1 cut(s) 912
Csp6I GTAC 6 cut(s) 87, 653, 788, 921, 1087, 1361
CviAII CATG 8 cut(s) 280, 369, 562, 595, 716, 784, 816, 1390
CviQI GTAC 6 cut(s) 87, 653, 788, 921, 1087, 1361
DdeI CTNAG 9 cut(s) 13, 83, 235, 259, 446, 549, 600, 964, 1413
DpnI GATC 1 cut(s) 746
DpnII GATC 1 cut(s) 744
DraIII CACNNNGTG 1 cut(s) 552
Eco130I CCWWGG 2 cut(s) 165, 471
Eco32I GATATC 2 cut(s) 256, 301
Eco47I GGWCC 1 cut(s) 475
Eco57I CTGAAG 2 cut(s) 353, 501
EcoNI CCTNNNNNAGG 1 cut(s) 293
EcoRII CCWGG 1 cut(s) 665
EcoRV GATATC 2 cut(s) 256, 301
EcoT14I CCWWGG 2 cut(s) 165, 471
EcoT22I ATGCAT 2 cut(s) 721, 785
ErhI CCWWGG 2 cut(s) 165, 471
FaeI CATG 8 cut(s) 283, 372, 565, 598, 719, 787, 819, 1393
FaqI GGGAC 1 cut(s) 880
FatI CATG 8 cut(s) 279, 368, 561, 594, 715, 783, 815, 1389
FauNDI CATATG 1 cut(s) 1132
FblI GTMKAC 2 cut(s) 309, 901
Fnu4HI GCNGC 2 cut(s) 99, 936
FokI GGATG 4 cut(s) 47, 97, 525, 792
Fsp4HI GCNGC 2 cut(s) 99, 936
FspBI CTAG 2 cut(s) 636, 1382
GluI GCNGC 2 cut(s) 99, 936
GsaI CCCAGC 1 cut(s) 98
GsuI CTGGAG 1 cut(s) 672
HaeIII GGCC 2 cut(s) 670, 1260
HapII CCGG 4 cut(s) 418, 424, 1265, 1351
HgaI GACGC 1 cut(s) 912
Hin1I GRCGYC 1 cut(s) 904
Hin1II CATG 8 cut(s) 283, 372, 565, 598, 719, 787, 819, 1393
HindIII AAGCTT 1 cut(s) 40
HinfI GANTC 7 cut(s) 200, 348, 641, 871, 983, 1100, 1127
HpaII CCGG 4 cut(s) 418, 424, 1265, 1351
HphI GGTGA 3 cut(s) 108, 200, 1105
Hpy166II GTNNAC 8 cut(s) 89, 199, 310, 559, 889, 902, 1040, 1387
Hpy188I TCNGA 8 cut(s) 84, 238, 253, 333, 967, 1311, 1325, 1431
Hpy188III TCNNGA 4 cut(s) 321, 689, 830, 1265
Hpy8I GTNNAC 8 cut(s) 89, 199, 310, 559, 889, 902, 1040, 1387
HpyAV CCTTC 6 cut(s) 138, 173, 750, 1162, 1271, 1320
HpyCH4III ACNGT 1 cut(s) 1360
HpyCH4V TGCA 8 cut(s) 127, 591, 719, 783, 1218, 1239, 1368, 1387
HpyF10VI GCNNNNNNNGC 1 cut(s) 1057
HpyF3I CTNAG 9 cut(s) 13, 83, 235, 259, 446, 549, 600, 964, 1413
Hsp92I GRCGYC 1 cut(s) 904
Hsp92II CATG 8 cut(s) 283, 372, 565, 598, 719, 787, 819, 1393
Kpn2I TCCGGA 1 cut(s) 1264
KpnI GGTACC 1 cut(s) 924
Kzo9I GATC 1 cut(s) 744
LmnI GCTCC 2 cut(s) 742, 881
Lsp1109I GCAGC 2 cut(s) 110, 922
LweI GCATC 2 cut(s) 600, 770
MaeI CTAG 2 cut(s) 636, 1382
MaeIII GTNAC 4 cut(s) 504, 988, 1160, 1408
MalI GATC 1 cut(s) 746
MboI GATC 1 cut(s) 744
MboII GAAGA 4 cut(s) 153, 188, 439, 604
MhlI GDGCHC 1 cut(s) 1389
MluCI AATT 5 cut(s) 457, 758, 1205, 1243, 1271
MlyI GAGTC 5 cut(s) 194, 650, 865, 1109, 1121
MmeI TCCRAC 2 cut(s) 895, 1178
MnlI CCTC 7 cut(s) 66, 124, 225, 609, 696, 911, 1019
Mph1103I ATGCAT 2 cut(s) 721, 785
MroI TCCGGA 1 cut(s) 1264
MseI TTAA 1 cut(s) 531
MspCI CTTAAG 1 cut(s) 530
MspI CCGG 4 cut(s) 418, 424, 1265, 1351
MspR9I CCNGG 2 cut(s) 667, 1351
Mva1269I GAATGC 1 cut(s) 1301
MvaI CCWGG 1 cut(s) 667
MvnI CGCG 1 cut(s) 1336
MwoI GCNNNNNNNGC 1 cut(s) 1057
NciI CCSGG 1 cut(s) 1351
NdeI CATATG 1 cut(s) 1132
NdeII GATC 1 cut(s) 744
NlaIII CATG 8 cut(s) 283, 372, 565, 598, 719, 787, 819, 1393
NlaIV GGNNCC 5 cut(s) 422, 477, 571, 922, 1322
NmuCI GTSAC 1 cut(s) 988
NsiI ATGCAT 2 cut(s) 721, 785
NspI RCATGY 2 cut(s) 283, 565
PaeI GCATGC 1 cut(s) 283
PciI ACATGT 1 cut(s) 561
PctI GAATGC 1 cut(s) 1301
PfeI GAWTC 2 cut(s) 348, 983
PflFI GACNNNGTC 1 cut(s) 327
PflMI CCANNNNNTGG 1 cut(s) 1229
PkrI GCNGC 2 cut(s) 100, 937
Ple19I CGATCG 1 cut(s) 747
PleI GAGTC 5 cut(s) 194, 649, 865, 1108, 1121
PpsI GAGTC 5 cut(s) 194, 649, 865, 1108, 1121
PscI ACATGT 1 cut(s) 561
PsiI TTATAA 1 cut(s) 999
Psp6I CCWGG 1 cut(s) 665
PspFI CCCAGC 1 cut(s) 94
PspGI CCWGG 1 cut(s) 665
PspN4I GGNNCC 5 cut(s) 422, 477, 571, 922, 1322
PspPI GGNCC 1 cut(s) 475
PsyI GACNNNGTC 1 cut(s) 327
PvuI CGATCG 1 cut(s) 747
RsaI GTAC 6 cut(s) 88, 654, 789, 922, 1088, 1362
RsaNI GTAC 6 cut(s) 87, 653, 788, 921, 1087, 1361
SaqAI TTAA 1 cut(s) 531
SatI GCNGC 2 cut(s) 99, 936
Sau3AI GATC 1 cut(s) 744
Sau96I GGNCC 1 cut(s) 475
ScaI AGTACT 1 cut(s) 1362
SchI GAGTC 5 cut(s) 194, 650, 865, 1109, 1121
ScrFI CCNGG 2 cut(s) 667, 1351
SduI GDGCHC 1 cut(s) 1389
SfaNI GCATC 2 cut(s) 600, 770
SfcI CTRYAG 1 cut(s) 489
SinI GGWCC 1 cut(s) 475
SmlI CTYRAG 2 cut(s) 530, 646
SmoI CTYRAG 2 cut(s) 530, 646
SphI GCATGC 1 cut(s) 283
Sse9I AATT 5 cut(s) 457, 758, 1205, 1243, 1271
SsiI CCGC 2 cut(s) 211, 1336
SspI AATATT 1 cut(s) 708
SspMI CTAG 2 cut(s) 636, 1382
StyD4I CCNGG 2 cut(s) 665, 1349
StyI CCWWGG 2 cut(s) 165, 471
TaaI ACNGT 1 cut(s) 1360
TaqI TCGA 6 cut(s) 134, 155, 322, 346, 743, 747
TasI AATT 5 cut(s) 457, 758, 1205, 1243, 1271
TatI WGTACW 3 cut(s) 86, 1086, 1360
TfiI GAWTC 2 cut(s) 348, 983
Tru1I TTAA 1 cut(s) 531
Tru9I TTAA 1 cut(s) 531
TscAI CASTG 4 cut(s) 71, 201, 553, 896
TseFI GTSAC 1 cut(s) 988
TseI GCWGC 2 cut(s) 98, 935
Tsp45I GTSAC 1 cut(s) 988
TspDTI ATGAA 6 cut(s) 388, 701, 789, 804, 1094, 1406
TspRI CASTG 4 cut(s) 71, 201, 553, 896
Tth111I GACNNNGTC 1 cut(s) 327
Van91I CCANNNNNTGG 1 cut(s) 1229
Vha464I CTTAAG 1 cut(s) 530
VneI GTGCAC 1 cut(s) 1385
VpaK11BI GGWCC 1 cut(s) 475
XagI CCTNNNNNAGG 1 cut(s) 293
XapI RAATTY 3 cut(s) 758, 1243, 1271
XceI RCATGY 2 cut(s) 283, 565
XcmI CCANNNNNNNNNTGG 2 cut(s) 1161, 1183
XmiI GTMKAC 2 cut(s) 309, 901
XspI CTAG 2 cut(s) 636, 1382
ZrmI AGTACT 1 cut(s) 1362
Zsp2I ATGCAT 2 cut(s) 721, 785
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.