FvH4_1g05391

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000111
Physical Location & Seq
Forward (+)
2853373 .. 2856486
3114 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g05391.t1

Sequence Viewer

Length: 1203 bp
ATGGAAGATGGTTCTGCAAAAGAGAAGAAGACAGAAGTCCACGGTGGTCAAAATGTCGACCTTCCACCCGAGATGATAGATGCGATTCTTTCAAGGGTACCAGTGAAGCCCTTATGCCGGTTCAAGCTTGTATCCAAGTCATGGCAGTCCCTAATTTCCGACCCTGATTTCGTCTCAAACTATTCCAAAACCGCCTTTGAGAATAAGGACGTCTTCTTCAGCAGACGACGCCTCTTTTTCGCTTTTTTTCGCGGCAGAAATCTTGTGGTTTACTCTTTGGATCTTGACCAGATTCTCAATAATGTTGATGGTTTAGTAGCAGCACCCACTGAGGTCAACTTTGTTTACAATCATCTTCGAAATGATGCACTTGATTATCGCGATCATTTTGTCGGTTCTTGCTATGGCTTGTTCTTGTGCGAGGTGATGATGAGTGGTAATGATATGGCTCGCCCATCAGAGGATTGTCGAAGCTGTTATGAATCGTTTATGCGATTCTTTCAAGGTTACCACTTACCAGTGAAGCCCTTGGGCCGGTTCAAGCTTGTATCCAAGTCCTGGCAGTCCCTAATCTCCGATCCTGATTTTGTCGCAAACTATTCCAAAGCCGCCATTGAGAATATGGATGTCTTGTTCAGAAGACGGCGCCTCCTCTTTACTTTAATGGACCCGGCACCAAGCAAAGGGATGTACTCATTGGATCTTGACCAGTTTCTCAATGAGAATCCTAATGCTGGTGTTGATGGTCTAGTAGCAACACCCTCCGAGATCGACTTTGTTTACAATCATCTTCCAGATGGTAGACTTGAATGGTTTCCCTTTGGCCTATATTCGTGCCCTGGATTTTTCTTGTCACATTTATGGTCTGGCGACTTCAGCGTCAATTTGATCGACCCTCTAACCAAGGAATCAAAGACAATACCAGAGCCACCAAAATGGAGACTTGGATTTGGATTTGATCGAGTTGGACATACTCATGGGATCCTGGTGAATGGTGCTGTTCATTGGTTGGCGGAGAAGGTTGCTGATGGATCATTTGTGATTATATCCTTCACTTTAGCAGAGGAGGAGGTTAGAGAACTTACACTACAGCCCAATACTCTGCCCAACACTTTAGCAGAGTATACTCTTCCGATTGAAGTAGGGAAATTCAGAGATTGGCTATGTATAACATCAAAACCAGGCCTAGCATATCTTCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

401

Amino Acids

45.52

Weight (kDa)

5.55

Isoelectric Point (pI)

39.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 20 - 57 1.8e-09 F-box domain
F-box-like PF12937 20 - 56 6.8e-07 F-box-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000111)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G06240
fragaria_vesca FvH4_1g04511 FvH4_1g04521 FvH4_1g05182 FvH4_1g05210 FvH4_1g05230 FvH4_1g05231 FvH4_1g05232 FvH4_1g05391 FvH4_1g05420 FvH4_2g41451 FvH4_3g15810 FvH4_3g15810 FvH4_3g18161 FvH4_3g19801 FvH4_3g39980 FvH4_3g39980 FvH4_3g39980 FvH4_3g39990 FvH4_3g40020 FvH4_3g40020 FvH4_3g40031 FvH4_3g40040 FvH4_4g32891 FvH4_5g33121 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g38210 FvH4_5g38211 FvH4_5g39231 FvH4_6g16940 FvH4_6g33181 FvH4_7g09411 FvH4_7g23271 FvH4_7g26741 FvH4_7g28012 FvH4_7g28013 FvH4_7g28031 FvH4_7g28041
malus_domestica MD03G1104200.v1.1 MD03G1139900.v1.1 MD03G1192800.v1.1 MD10G1202200.v1.1 MD11G1131100.v1.1 MD11G1202700.v1.1 MD11G1203000.v1.1
prunus_persica Prupe.2G163500_v2.0.a1 Prupe.4G140000_v2.0.a1 Prupe.4G140100_v2.0.a1 Prupe.4G222200_v2.0.a1 Prupe.4G236200_v2.0.a1 Prupe.4G236300_v2.0.a1 Prupe.4G236400_v2.0.a1 Prupe.4G237500_v2.0.a1 Prupe.6G125500_v2.0.a1
pyrus_communis pycom03g14510 pycom05g20120 pycom11g10840 pycom11g17520 pycom11g17590 pycom15g03310
rosa_chinensis RchiOBHm_Chr0c44g0503541 RchiOBHm_Chr2g0090931 RchiOBHm_Chr2g0090941 RchiOBHm_Chr2g0090951 RchiOBHm_Chr2g0090961 RchiOBHm_Chr2g0092791 RchiOBHm_Chr2g0099041 RchiOBHm_Chr2g0169971 RchiOBHm_Chr2g0170021 RchiOBHm_Chr4g0386131 RchiOBHm_Chr4g0386141 RchiOBHm_Chr4g0386161 RchiOBHm_Chr4g0386281 RchiOBHm_Chr4g0386291 RchiOBHm_Chr4g0440811 RchiOBHm_Chr5g0026601 RchiOBHm_Chr5g0026621 RchiOBHm_Chr5g0026871 RchiOBHm_Chr5g0072021 RchiOBHm_Chr5g0072031 RchiOBHm_Chr5g0072171 RchiOBHm_Chr5g0072181 RchiOBHm_Chr7g0231281 RchiOBHm_Chr7g0231301 RchiOBHm_Chr7g0240141
rosa_laevigata RLG00000000695 RLG00000001421 RLG00000004300 RLG00000006148 RLG00000006151 RLG00000016157 RLG00000016158 RLG00000016159 RLG00000016160 RLG00000016161 RLG00000020474 RLG00000021915 RLG00000029159 RLG00000032939 RLG00000032940 RLG00000032966 RLG00000036270 RLG00000036272 RLG00000036280 RLG00000036284
rosa_multiflora Rmu_co8434269.1_g000001 Rmu_sc0000792.1_g000017 Rmu_sc0000792.1_g000018 Rmu_sc0000792.1_g000019 Rmu_sc0001132.1_g000008 Rmu_sc0001152.1_g000004 Rmu_sc0001152.1_g000033 Rmu_sc0001583.1_g000004 Rmu_sc0003305.1_g000001 Rmu_sc0003333.1_g000005 Rmu_sc0003396.1_g000010 Rmu_sc0003396.1_g000011 Rmu_sc0003396.1_g000017 Rmu_sc0004571.1_g000004 Rmu_sc0004851.1_g000003 Rmu_sc0004851.1_g000004 Rmu_sc0005008.1_g000015 Rmu_sc0006854.1_g000016 Rmu_sc0006854.1_g000023 Rmu_sc0009422.1_g000009 Rmu_sc0010610.1_g000003 Rmu_sc0018952.1_g000008 Rmu_sc0037136.1_g000001 Rmu_ssc0000172.1_g000016 Rmu_ssc0000389.1_g000005
rosa_roxburghii Rroxscaffold_1G00009050 Rroxscaffold_1G00009090 Rroxscaffold_1G00009130 Rroxscaffold_1G00009230 Rroxscaffold_1G00044650 Rroxscaffold_1G00052600 Rroxscaffold_1G00052610 Rroxscaffold_1G00052860 Rroxscaffold_1G00052880 Rroxscaffold_2G00081700 Rroxscaffold_2G00148820 Rroxscaffold_2G00150560 Rroxscaffold_2G00150570 Rroxscaffold_2G00150590 Rroxscaffold_2G00150600 Rroxscaffold_2G00150630 Rroxscaffold_2G00150730 Rroxscaffold_2G00150740 Rroxscaffold_3G00229360 Rroxscaffold_3G00262430 Rroxscaffold_4G00313090 Rroxscaffold_5G00381610
rosa_rugosa Rorug01G0285600 Rorug02G0011200 Rorug02G0011300 Rorug02G0011400 Rorug02G0012500 Rorug02G0012600 Rorug02G0012700 Rorug02G0029300 Rorug02G0075800 Rorug02G0075900 Rorug02G0419600 Rorug02G0544800 Rorug04G0112200 Rorug05G0094100 Rorug05G0094100 Rorug05G0094200 Rorug05G0415900 Rorug05G0415900 Rorug05G0416000 Rorug05G0416100 Rorug05G0416200 Rorug05G0416300 Rorug05G0416700 Rorug05G0416800 Rorug07G0265700 Rorug07G0265800 Rorug07G0265900 Rorug07G0266000 Rorug07G0266100
rosa_samantha Rh2AG057300 Rh2AG057400 Rh2AG058700 Rh2AG478800 Rh2AG616800 Rh2DG056700 Rh2DG056800 Rh2DG056900 Rh2DG073500 Rh2DG129700 Rh2DG639800 Rh4AG380100 Rh4DG386700 Rh5AG187500 Rh5AG187700 Rh5AG189200 Rh5AG472100 Rh5AG472800 Rh5BG184000 Rh5BG184200 Rh5BG185800 Rh5BG186500 Rh5CG204000 Rh5CG205800 Rh5DG186300 Rh5DG186500 Rh5DG188100 Rh5DG503500 Rh5DG503700 Rh5DG504000 Rh5DG504100 Rh5DG504700 Rh5DG504900 Rh5DG505000 Rh7AG419500 Rh7AG419800 Rh7CG439300 Rh7DG413100
rosa_wichuraiana Rw0G002880 Rw1G026240 Rw2G005200 Rw2G005210 Rw2G005820 Rw2G009640 Rw5G016980 Rw5G017000 Rw5G017190 Rw5G043880 Rw7G011300 Rw7G034680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 878
AatII GACGTC 1 cut(s) 213
Acc65I GGTACC 1 cut(s) 97
AccB1I GGYRCC 3 cut(s) 97, 645, 673
AccB7I CCANNNNNTGG 2 cut(s) 141, 558
AccI GTMKAC 3 cut(s) 57, 802, 1124
AccII CGCG 2 cut(s) 252, 381
AciI CCGC 4 cut(s) 192, 252, 609, 1013
AclWI GGATC 6 cut(s) 288, 572, 708, 976, 989, 1039
AcsI RAATTY 1 cut(s) 1148
AcuI CTGAAG 2 cut(s) 202, 859
AcyI GRCGYC 3 cut(s) 210, 229, 646
AfaI GTAC 2 cut(s) 99, 692
AfiI CCNNNNNNNGG 7 cut(s) 117, 141, 460, 534, 558, 683, 734
AgsI TTSAA 6 cut(s) 93, 124, 503, 541, 809, 1139
AjnI CCWGG 4 cut(s) 557, 838, 984, 1180
AloI GAACNNNNNNTCC 2 cut(s) 617, 649
AluBI AGCT 3 cut(s) 127, 474, 544
AluI AGCT 3 cut(s) 127, 474, 544
Alw26I GTCTC 2 cut(s) 178, 934
AlwI GGATC 6 cut(s) 288, 572, 708, 976, 989, 1039
Ama87I CYCGRG 1 cut(s) 68
AoxI GGCC 3 cut(s) 532, 823, 1183
ApeKI GCWGC 1 cut(s) 320
ApoI RAATTY 1 cut(s) 1148
ArsI GACNNNNNNTTYG 2 cut(s) 152, 184
Asp700I GAANNNNTTC 1 cut(s) 813
Asp718I GGTACC 1 cut(s) 97
AspLEI GCGC 1 cut(s) 648
AspS9I GGNCC 2 cut(s) 532, 667
AsuC2I CCSGG 1 cut(s) 671
AsuHPI GGTGA 2 cut(s) 436, 1000
AsuII TTCGAA 1 cut(s) 358
AvaI CYCGRG 1 cut(s) 68
AvaII GGWCC 1 cut(s) 667
BaeGI GKGCMC 1 cut(s) 839
BamHI GGATCC 1 cut(s) 981
BanI GGYRCC 3 cut(s) 97, 645, 673
BbsI GAAGAC 3 cut(s) 35, 205, 646
BbvI GCAGC 1 cut(s) 332
BccI CCATC 6 cut(s) 2, 302, 463, 737, 791, 1022
BceAI ACGGC 1 cut(s) 659
BciT130I CCWGG 4 cut(s) 559, 840, 986, 1182
BciVI GTATCC 2 cut(s) 142, 559
BcnI CCSGG 1 cut(s) 671
BcoDI GTCTC 2 cut(s) 178, 934
BfaI CTAG 2 cut(s) 749, 1187
BfmI CTRYAG 1 cut(s) 1088
BfoI RGCGCY 1 cut(s) 649
BfuI GTATCC 2 cut(s) 142, 559
BisI GCNGC 3 cut(s) 253, 321, 609
BlsI GCNGC 3 cut(s) 254, 322, 610
Bme1390I CCNGG 5 cut(s) 559, 671, 840, 986, 1182
Bme18I GGWCC 1 cut(s) 667
BmeT110I CYCGRG 1 cut(s) 68
BmgT120I GGNCC 2 cut(s) 532, 667
BmiI GGNNCC 5 cut(s) 99, 647, 669, 675, 983
BmrFI CCNGG 5 cut(s) 559, 671, 840, 986, 1182
BmsI GCATC 2 cut(s) 70, 355
BoxI GACNNNNGTC 1 cut(s) 35
BpiI GAAGAC 3 cut(s) 35, 205, 646
Bpu14I TTCGAA 1 cut(s) 358
BpuMI CCSGG 1 cut(s) 671
BsaHI GRCGYC 3 cut(s) 210, 229, 646
BsaJI CCNNGG 4 cut(s) 40, 528, 838, 903
BsaXI ACNNNNNCTCC 2 cut(s) 633, 663
Bsc4I CCNNNNNNNGG 7 cut(s) 117, 141, 460, 534, 558, 683, 734
Bse118I RCCGGY 2 cut(s) 117, 534
Bse1I ACTGG 3 cut(s) 101, 518, 709
BseBI CCWGG 4 cut(s) 559, 840, 986, 1182
BseDI CCNNGG 4 cut(s) 40, 528, 838, 903
BseGI GGATG 2 cut(s) 631, 693
BseLI CCNNNNNNNGG 7 cut(s) 117, 141, 460, 534, 558, 683, 734
BseMII CTCAG 1 cut(s) 321
BseNI ACTGG 3 cut(s) 101, 518, 709
BseRI GAGGAG 3 cut(s) 641, 1079, 1082
BseSI GKGCMC 1 cut(s) 839
BseXI GCAGC 1 cut(s) 332
Bsh1236I CGCG 2 cut(s) 252, 381
BshFI GGCC 3 cut(s) 534, 825, 1185
BshNI GGYRCC 3 cut(s) 97, 645, 673
BsiHKCI CYCGRG 1 cut(s) 68
BsiSI CCGG 3 cut(s) 118, 535, 671
BslFI GGGAC 2 cut(s) 133, 550
BslI CCNNNNNNNGG 7 cut(s) 117, 141, 460, 534, 558, 683, 734
BsmAI GTCTC 2 cut(s) 178, 934
BsmBI CGTCTC 1 cut(s) 178
BsmFI GGGAC 2 cut(s) 133, 550
BsnI GGCC 3 cut(s) 534, 825, 1185
BsoBI CYCGRG 1 cut(s) 68
Bsp119I TTCGAA 1 cut(s) 358
Bsp1286I GDGCHC 1 cut(s) 839
Bsp143I GATC 9 cut(s) 280, 382, 577, 700, 768, 888, 958, 981, 1031
Bsp68I TCGCGA 1 cut(s) 381
BspACI CCGC 4 cut(s) 192, 252, 609, 1013
BspANI GGCC 3 cut(s) 534, 825, 1185
BspCNI CTCAG 1 cut(s) 322
BspFNI CGCG 2 cut(s) 252, 381
BspLI GGNNCC 5 cut(s) 99, 647, 669, 675, 983
BspPI GGATC 6 cut(s) 288, 572, 708, 976, 989, 1039
BspT104I TTCGAA 1 cut(s) 358
BspT107I GGYRCC 3 cut(s) 97, 645, 673
BsrFI RCCGGY 2 cut(s) 117, 534
BsrI ACTGG 3 cut(s) 101, 518, 709
BssAI RCCGGY 2 cut(s) 117, 534
BssECI CCNNGG 4 cut(s) 40, 528, 838, 903
BssMI GATC 9 cut(s) 280, 382, 577, 700, 768, 888, 958, 981, 1031
BssNAI GTATAC 1 cut(s) 1125
BssNI GRCGYC 3 cut(s) 210, 229, 646
BssT1I CCWWGG 2 cut(s) 528, 903
Bst1107I GTATAC 1 cut(s) 1125
Bst2UI CCWGG 4 cut(s) 559, 840, 986, 1182
Bst4CI ACNGT 1 cut(s) 44
Bst6I CTCTTC 1 cut(s) 1134
BstACI GRCGYC 3 cut(s) 210, 229, 646
BstBI TTCGAA 1 cut(s) 358
BstC8I GCNNGC 1 cut(s) 451
BstDEI CTNAG 1 cut(s) 330
BstDSI CCRYGG 1 cut(s) 40
BstEII GGTNACC 1 cut(s) 506
BstF5I GGATG 2 cut(s) 631, 693
BstFNI CGCG 2 cut(s) 252, 381
BstH2I RGCGCY 1 cut(s) 649
BstHHI GCGC 1 cut(s) 648
BstKTI GATC 9 cut(s) 283, 385, 580, 703, 771, 891, 961, 984, 1034
BstMAI GTCTC 2 cut(s) 178, 934
BstMBI GATC 9 cut(s) 280, 382, 577, 700, 768, 888, 958, 981, 1031
BstMWI GCNNNNNNNGC 2 cut(s) 228, 876
BstNI CCWGG 4 cut(s) 559, 840, 986, 1182
BstPAI GACNNNNGTC 1 cut(s) 35
BstPI GGTNACC 1 cut(s) 506
BstSCI CCNGG 5 cut(s) 557, 669, 838, 984, 1180
BstSFI CTRYAG 1 cut(s) 1088
BstSLI GKGCMC 1 cut(s) 839
BstUI CGCG 2 cut(s) 252, 381
BstV1I GCAGC 1 cut(s) 332
BstV2I GAAGAC 3 cut(s) 35, 205, 646
BstX2I RGATCY 3 cut(s) 280, 700, 981
BstXI CCANNNNNNTGG 1 cut(s) 936
BstYI RGATCY 3 cut(s) 280, 700, 981
BstZ17I GTATAC 1 cut(s) 1125
BsuI GTATCC 2 cut(s) 142, 559
BsuRI GGCC 3 cut(s) 534, 825, 1185
BtgI CCRYGG 1 cut(s) 40
BtsCI GGATG 2 cut(s) 631, 693
BtsIMutI CAGTG 3 cut(s) 108, 327, 525
BtuMI TCGCGA 1 cut(s) 381
Cac8I GCNNGC 1 cut(s) 451
CfoI GCGC 1 cut(s) 648
Cfr10I RCCGGY 2 cut(s) 117, 534
Cfr13I GGNCC 2 cut(s) 532, 667
CseI GACGC 2 cut(s) 237, 868
Csp6I GTAC 2 cut(s) 98, 691
CviAII CATG 2 cut(s) 141, 977
CviQI GTAC 2 cut(s) 98, 691
DdeI CTNAG 1 cut(s) 330
DinI GGCGCC 1 cut(s) 647
DpnI GATC 9 cut(s) 282, 384, 579, 702, 770, 890, 960, 983, 1033
DpnII GATC 9 cut(s) 280, 382, 577, 700, 768, 888, 958, 981, 1031
DrdI GACNNNNNNGTC 1 cut(s) 878
DseDI GACNNNNNNGTC 1 cut(s) 878
Eam1104I CTCTTC 1 cut(s) 1134
EarI CTCTTC 1 cut(s) 1134
EciI GGCGGA 1 cut(s) 1028
Eco130I CCWWGG 2 cut(s) 528, 903
Eco147I AGGCCT 1 cut(s) 1185
Eco47I GGWCC 1 cut(s) 667
Eco57I CTGAAG 2 cut(s) 202, 859
Eco88I CYCGRG 1 cut(s) 68
Eco91I GGTNACC 1 cut(s) 506
EcoO65I GGTNACC 1 cut(s) 506
EcoRII CCWGG 4 cut(s) 557, 838, 984, 1180
EcoT14I CCWWGG 2 cut(s) 528, 903
EgeI GGCGCC 1 cut(s) 647
EheI GGCGCC 1 cut(s) 647
ErhI CCWWGG 2 cut(s) 528, 903
Esp3I CGTCTC 1 cut(s) 178
FaeI CATG 2 cut(s) 144, 980
FalI AAGNNNNNCTT 2 cut(s) 197, 229
FaqI GGGAC 2 cut(s) 133, 550
FatI CATG 2 cut(s) 140, 976
FblI GTMKAC 3 cut(s) 57, 802, 1124
Fnu4HI GCNGC 3 cut(s) 253, 321, 609
FokI GGATG 2 cut(s) 638, 700
Fsp4HI GCNGC 3 cut(s) 253, 321, 609
FspBI CTAG 2 cut(s) 749, 1187
GlaI GCGC 1 cut(s) 647
GluI GCNGC 3 cut(s) 253, 321, 609
HaeII RGCGCY 1 cut(s) 649
HaeIII GGCC 3 cut(s) 534, 825, 1185
HapII CCGG 3 cut(s) 118, 535, 671
HgaI GACGC 2 cut(s) 237, 868
HhaI GCGC 1 cut(s) 648
Hin1I GRCGYC 3 cut(s) 210, 229, 646
Hin1II CATG 2 cut(s) 144, 980
Hin6I GCGC 1 cut(s) 646
HinP1I GCGC 1 cut(s) 646
HincII GTYRAC 2 cut(s) 58, 337
HindII GTYRAC 2 cut(s) 58, 337
HindIII AAGCTT 2 cut(s) 125, 542
HinfI GANTC 6 cut(s) 85, 292, 482, 495, 724, 908
HpaII CCGG 3 cut(s) 118, 535, 671
HphI GGTGA 2 cut(s) 436, 1000
Hpy166II GTNNAC 8 cut(s) 40, 58, 271, 337, 346, 781, 803, 1125
Hpy188I TCNGA 7 cut(s) 160, 460, 577, 638, 766, 1134, 1154
Hpy188III TCNNGA 5 cut(s) 284, 380, 581, 704, 794
Hpy8I GTNNAC 8 cut(s) 40, 58, 271, 337, 346, 781, 803, 1125
Hpy99I CGWCG 1 cut(s) 231
HpyAV CCTTC 3 cut(s) 71, 1012, 1060
HpyCH4III ACNGT 1 cut(s) 44
HpyCH4IV ACGT 1 cut(s) 210
HpyCH4V TGCA 2 cut(s) 17, 368
HpyF10VI GCNNNNNNNGC 2 cut(s) 228, 876
HpyF3I CTNAG 1 cut(s) 330
HpySE526I ACGT 1 cut(s) 210
Hsp92I GRCGYC 3 cut(s) 210, 229, 646
Hsp92II CATG 2 cut(s) 144, 980
HspAI GCGC 1 cut(s) 646
KasI GGCGCC 1 cut(s) 645
KpnI GGTACC 1 cut(s) 101
Kzo9I GATC 9 cut(s) 280, 382, 577, 700, 768, 888, 958, 981, 1031
Lsp1109I GCAGC 1 cut(s) 332
LweI GCATC 2 cut(s) 70, 355
MaeI CTAG 2 cut(s) 749, 1187
MaeII ACGT 1 cut(s) 210
MaeIII GTNAC 2 cut(s) 506, 852
MalI GATC 9 cut(s) 282, 384, 579, 702, 770, 890, 960, 983, 1033
MboI GATC 9 cut(s) 280, 382, 577, 700, 768, 888, 958, 981, 1031
MflI RGATCY 3 cut(s) 280, 700, 981
MhlI GDGCHC 1 cut(s) 839
MluCI AATT 3 cut(s) 153, 883, 1148
Mly113I GGCGCC 1 cut(s) 646
MmeI TCCRAC 2 cut(s) 183, 946
MroXI GAANNNNTTC 1 cut(s) 813
MseI TTAA 1 cut(s) 662
MslI CAYNNNNRTG 3 cut(s) 859, 934, 975
MspI CCGG 3 cut(s) 118, 535, 671
MspR9I CCNGG 5 cut(s) 559, 671, 840, 986, 1182
MvaI CCWGG 4 cut(s) 559, 840, 986, 1182
MvnI CGCG 2 cut(s) 252, 381
MwoI GCNNNNNNNGC 2 cut(s) 228, 876
NarI GGCGCC 1 cut(s) 646
NciI CCSGG 1 cut(s) 671
NdeII GATC 9 cut(s) 280, 382, 577, 700, 768, 888, 958, 981, 1031
NlaIII CATG 2 cut(s) 144, 980
NlaIV GGNNCC 5 cut(s) 99, 647, 669, 675, 983
NmuCI GTSAC 1 cut(s) 852
NruI TCGCGA 1 cut(s) 381
NspV TTCGAA 1 cut(s) 358
PceI AGGCCT 1 cut(s) 1185
PdmI GAANNNNTTC 1 cut(s) 813
PfeI GAWTC 6 cut(s) 85, 292, 482, 495, 724, 908
PflMI CCANNNNNTGG 2 cut(s) 141, 558
PkrI GCNGC 3 cut(s) 254, 322, 610
PluTI GGCGCC 1 cut(s) 649
PshAI GACNNNNGTC 1 cut(s) 35
Psp6I CCWGG 4 cut(s) 557, 838, 984, 1180
PspEI GGTNACC 1 cut(s) 506
PspGI CCWGG 4 cut(s) 557, 838, 984, 1180
PspN4I GGNNCC 5 cut(s) 99, 647, 669, 675, 983
PspPI GGNCC 2 cut(s) 532, 667
PsrI GAACNNNNNNTAC 2 cut(s) 1071, 1103
PsuI RGATCY 3 cut(s) 280, 700, 981
RruI TCGCGA 1 cut(s) 381
RsaI GTAC 2 cut(s) 99, 692
RsaNI GTAC 2 cut(s) 98, 691
RseI CAYNNNNRTG 3 cut(s) 859, 934, 975
SalI GTCGAC 1 cut(s) 56
SaqAI TTAA 1 cut(s) 662
SatI GCNGC 3 cut(s) 253, 321, 609
Sau3AI GATC 9 cut(s) 280, 382, 577, 700, 768, 888, 958, 981, 1031
Sau96I GGNCC 2 cut(s) 532, 667
ScrFI CCNGG 5 cut(s) 559, 671, 840, 986, 1182
SduI GDGCHC 1 cut(s) 839
SfaNI GCATC 2 cut(s) 70, 355
SfcI CTRYAG 1 cut(s) 1088
SfoI GGCGCC 1 cut(s) 647
SfuI TTCGAA 1 cut(s) 358
SinI GGWCC 1 cut(s) 667
SmiMI CAYNNNNRTG 3 cut(s) 859, 934, 975
Sse9I AATT 3 cut(s) 153, 883, 1148
SseBI AGGCCT 1 cut(s) 1185
SsiI CCGC 4 cut(s) 192, 252, 609, 1013
SspDI GGCGCC 1 cut(s) 645
SspMI CTAG 2 cut(s) 749, 1187
StuI AGGCCT 1 cut(s) 1185
StyD4I CCNGG 5 cut(s) 557, 669, 838, 984, 1180
StyI CCWWGG 2 cut(s) 528, 903
TaaI ACNGT 1 cut(s) 44
TaiI ACGT 1 cut(s) 213
TaqI TCGA 6 cut(s) 57, 358, 469, 771, 891, 961
TasI AATT 3 cut(s) 153, 883, 1148
TatI WGTACW 1 cut(s) 690
TauI GCSGC 2 cut(s) 255, 611
TfiI GAWTC 6 cut(s) 85, 292, 482, 495, 724, 908
Tru1I TTAA 1 cut(s) 662
Tru9I TTAA 1 cut(s) 662
TscAI CASTG 3 cut(s) 108, 334, 525
TseFI GTSAC 1 cut(s) 852
TseI GCWGC 1 cut(s) 320
Tsp45I GTSAC 1 cut(s) 852
TspDTI ATGAA 2 cut(s) 495, 992
TspRI CASTG 3 cut(s) 108, 334, 525
Van91I CCANNNNNTGG 2 cut(s) 141, 558
VpaK11BI GGWCC 1 cut(s) 667
XapI RAATTY 1 cut(s) 1148
XcmI CCANNNNNNNNNTGG 1 cut(s) 619
XmiI GTMKAC 3 cut(s) 57, 802, 1124
XmnI GAANNNNTTC 1 cut(s) 813
XspI CTAG 2 cut(s) 749, 1187
ZraI GACGTC 1 cut(s) 211
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.