Rorug02G0011300

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000111
Physical Location & Seq
Forward (+)
1000949 .. 1003163
2215 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0011300.1

Sequence Viewer

Length: 1299 bp
ATGGCTGAACAGAAGACCGGAGACGCCGTGCTCCACGGCAAGTACGAGCTGGGGCGAATGCTCGGCCACGGCACCTTCGCCAAGGTGTACCATGCCCGGAACGTAGAGACGGGGAAATCCATGGCCATGAAGGTGGTGGGGAAAGAGAAGGTGATCAGAGTCGGGATGATGGAGCAGATCAAGAGAGAAATATCAGTCATGAGGATGGTGAAGCATCCCAACATCGTGGAGCTCCATGAGGTGATGGCGAGCAAGTCCAAGATCTATTTCGCCATGGATCTGGTCCGAGGCGGCGAGCTTTTTGCTAAAATCGCCAAGGGCCGGCTGAAGGAGGACGTGGCAAGAGTCTATTTCCAGCAGCTCATCTCCGCCATCGATTTCTGCCACAGCCGGGGAGTCTACCACCGGGATCTGAAGCCGGAAAACCTCCTCCTAGATGAAGACGGCAACTTGAAGGTCACTGACTTCGGGCTCAGTGCTTTCACCGAGCACCTAAAGCAAGACGGGCTCTTGCACACCACTTGTGGCACGCCGGCGTATGTAGCGCCGGAGGTGATAGGGAAGAAGGGTTACGACGGAGCCAAAGCGGATCTCTGGTCATGTGGAGTTATTCTTTATGTGCTTCTGGCCGGGTTTCTGCCATTTCAAGATGACAATTTGGTGTCCATGTATAGAAAGATTTACAGGGGAGACTTCAAATGCCCGCCTTGGTTTTCTTCCGAGGCCAGGAGACTCGTCACGAAGCTTCTGGACCCGAACCCGAGTACCAGAATCTCCGTTTCCAAGATCATGGACTCGTCTTGGTTCAAGAAATCGGTGCCCAAGGCGGTCAAGTCTTTCTCAAAGAAGGAGCAGGAGTTCGATGAGACTTCAGAGAAGAATTCCAAGCAGACGGAGACATTGAATGCATTTCATATCATCTCGCTCTCTGAAGGGTTCGACCTGTCTCCTCTCTTCGAGGAGAAGAAGAGGGAGGAGAAGGTGGAGCTGAGATTCGCTACGACGCGGTCGGCGAGCAGCGTGATATCGAAATTGGAGGAGGTGGCGAAAGCTGGCAAGTTCAGGGTGAAGAAGAGCGACTCCATGGTCAGGCTTCAGGGAGAGGAGAGCGGCAGGAAAGGGAAGCTCGCCATTGCGGCCGAGATTTTCGCTGTAACGCCGTCGTTTCTGGTTGTGGAGGTGAAGAAGGACAATGGTGATACTCTGGAGTACAACCAGTTCTGCAGCAAAGAGCTCAGACCCGCGTTGAAAGACATTGTCTGGACTAACTCGCCCGCCCCTGCTTTATTGTTGCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

432

Amino Acids

48.6

Weight (kDa)

9.21

Isoelectric Point (pI)

32.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 15 - 269 1.4e-74 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 16 - 264 5.2e-34 Protein tyrosine and serine/threonine kinase
NAF PF03822 299 - 358 1.9e-21 NAF domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000111)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G06240
fragaria_vesca FvH4_1g04511 FvH4_1g04521 FvH4_1g05182 FvH4_1g05210 FvH4_1g05230 FvH4_1g05231 FvH4_1g05232 FvH4_1g05391 FvH4_1g05420 FvH4_2g41451 FvH4_3g15810 FvH4_3g15810 FvH4_3g18161 FvH4_3g19801 FvH4_3g39980 FvH4_3g39980 FvH4_3g39980 FvH4_3g39990 FvH4_3g40020 FvH4_3g40020 FvH4_3g40031 FvH4_3g40040 FvH4_4g32891 FvH4_5g33121 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g38210 FvH4_5g38211 FvH4_5g39231 FvH4_6g16940 FvH4_6g33181 FvH4_7g09411 FvH4_7g23271 FvH4_7g26741 FvH4_7g28012 FvH4_7g28013 FvH4_7g28031 FvH4_7g28041
malus_domestica MD03G1104200.v1.1 MD03G1139900.v1.1 MD03G1192800.v1.1 MD10G1202200.v1.1 MD11G1131100.v1.1 MD11G1202700.v1.1 MD11G1203000.v1.1
prunus_persica Prupe.2G163500_v2.0.a1 Prupe.4G140000_v2.0.a1 Prupe.4G140100_v2.0.a1 Prupe.4G222200_v2.0.a1 Prupe.4G236200_v2.0.a1 Prupe.4G236300_v2.0.a1 Prupe.4G236400_v2.0.a1 Prupe.4G237500_v2.0.a1 Prupe.6G125500_v2.0.a1
pyrus_communis pycom03g14510 pycom05g20120 pycom11g10840 pycom11g17520 pycom11g17590 pycom15g03310
rosa_chinensis RchiOBHm_Chr0c44g0503541 RchiOBHm_Chr2g0090931 RchiOBHm_Chr2g0090941 RchiOBHm_Chr2g0090951 RchiOBHm_Chr2g0090961 RchiOBHm_Chr2g0092791 RchiOBHm_Chr2g0099041 RchiOBHm_Chr2g0169971 RchiOBHm_Chr2g0170021 RchiOBHm_Chr4g0386131 RchiOBHm_Chr4g0386141 RchiOBHm_Chr4g0386161 RchiOBHm_Chr4g0386281 RchiOBHm_Chr4g0386291 RchiOBHm_Chr4g0440811 RchiOBHm_Chr5g0026601 RchiOBHm_Chr5g0026621 RchiOBHm_Chr5g0026871 RchiOBHm_Chr5g0072021 RchiOBHm_Chr5g0072031 RchiOBHm_Chr5g0072171 RchiOBHm_Chr5g0072181 RchiOBHm_Chr7g0231281 RchiOBHm_Chr7g0231301 RchiOBHm_Chr7g0240141
rosa_laevigata RLG00000000695 RLG00000001421 RLG00000004300 RLG00000006148 RLG00000006151 RLG00000016157 RLG00000016158 RLG00000016159 RLG00000016160 RLG00000016161 RLG00000020474 RLG00000021915 RLG00000029159 RLG00000032939 RLG00000032940 RLG00000032966 RLG00000036270 RLG00000036272 RLG00000036280 RLG00000036284
rosa_multiflora Rmu_co8434269.1_g000001 Rmu_sc0000792.1_g000017 Rmu_sc0000792.1_g000018 Rmu_sc0000792.1_g000019 Rmu_sc0001132.1_g000008 Rmu_sc0001152.1_g000004 Rmu_sc0001152.1_g000033 Rmu_sc0001583.1_g000004 Rmu_sc0003305.1_g000001 Rmu_sc0003333.1_g000005 Rmu_sc0003396.1_g000010 Rmu_sc0003396.1_g000011 Rmu_sc0003396.1_g000017 Rmu_sc0004571.1_g000004 Rmu_sc0004851.1_g000003 Rmu_sc0004851.1_g000004 Rmu_sc0005008.1_g000015 Rmu_sc0006854.1_g000016 Rmu_sc0006854.1_g000023 Rmu_sc0009422.1_g000009 Rmu_sc0010610.1_g000003 Rmu_sc0018952.1_g000008 Rmu_sc0037136.1_g000001 Rmu_ssc0000172.1_g000016 Rmu_ssc0000389.1_g000005
rosa_roxburghii Rroxscaffold_1G00009050 Rroxscaffold_1G00009090 Rroxscaffold_1G00009130 Rroxscaffold_1G00009230 Rroxscaffold_1G00044650 Rroxscaffold_1G00052600 Rroxscaffold_1G00052610 Rroxscaffold_1G00052860 Rroxscaffold_1G00052880 Rroxscaffold_2G00081700 Rroxscaffold_2G00148820 Rroxscaffold_2G00150560 Rroxscaffold_2G00150570 Rroxscaffold_2G00150590 Rroxscaffold_2G00150600 Rroxscaffold_2G00150630 Rroxscaffold_2G00150730 Rroxscaffold_2G00150740 Rroxscaffold_3G00229360 Rroxscaffold_3G00262430 Rroxscaffold_4G00313090 Rroxscaffold_5G00381610
rosa_rugosa Rorug01G0285600 Rorug02G0011200 Rorug02G0011300 Rorug02G0011400 Rorug02G0012500 Rorug02G0012600 Rorug02G0012700 Rorug02G0029300 Rorug02G0075800 Rorug02G0075900 Rorug02G0419600 Rorug02G0544800 Rorug04G0112200 Rorug05G0094100 Rorug05G0094100 Rorug05G0094200 Rorug05G0415900 Rorug05G0415900 Rorug05G0416000 Rorug05G0416100 Rorug05G0416200 Rorug05G0416300 Rorug05G0416700 Rorug05G0416800 Rorug07G0265700 Rorug07G0265800 Rorug07G0265900 Rorug07G0266000 Rorug07G0266100
rosa_samantha Rh2AG057300 Rh2AG057400 Rh2AG058700 Rh2AG478800 Rh2AG616800 Rh2DG056700 Rh2DG056800 Rh2DG056900 Rh2DG073500 Rh2DG129700 Rh2DG639800 Rh4AG380100 Rh4DG386700 Rh5AG187500 Rh5AG187700 Rh5AG189200 Rh5AG472100 Rh5AG472800 Rh5BG184000 Rh5BG184200 Rh5BG185800 Rh5BG186500 Rh5CG204000 Rh5CG205800 Rh5DG186300 Rh5DG186500 Rh5DG188100 Rh5DG503500 Rh5DG503700 Rh5DG504000 Rh5DG504100 Rh5DG504700 Rh5DG504900 Rh5DG505000 Rh7AG419500 Rh7AG419800 Rh7CG439300 Rh7DG413100
rosa_wichuraiana Rw0G002880 Rw1G026240 Rw2G005200 Rw2G005210 Rw2G005820 Rw2G009640 Rw5G016980 Rw5G017000 Rw5G017190 Rw5G043880 Rw7G011300 Rw7G034680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1085
AccB1I GGYRCC 2 cut(s) 71, 817
AccBSI CCGCTC 1 cut(s) 1110
AccI GTMKAC 1 cut(s) 399
AccII CGCG 2 cut(s) 1006, 1244
AclWI GGATC 3 cut(s) 285, 417, 597
AcoI YGGCCR 4 cut(s) 64, 123, 627, 1137
AcsI RAATTY 1 cut(s) 880
AcuI CTGAAG 5 cut(s) 347, 434, 855, 951, 1079
AcyI GRCGYC 1 cut(s) 24
AfaI GTAC 4 cut(s) 44, 89, 766, 1211
AfiI CCNNNNNNNGG 5 cut(s) 321, 328, 391, 726, 1089
AgsI TTSAA 6 cut(s) 454, 647, 697, 808, 904, 1249
AjiI CACGTC 1 cut(s) 337
AjnI CCWGG 1 cut(s) 725
AjuI GAANNNNNNNTTGG 2 cut(s) 251, 283
AloI GAACNNNNNNTCC 2 cut(s) 842, 874
AluBI AGCT 9 cut(s) 49, 232, 298, 361, 745, 988, 1052, 1126, 1234
AluI AGCT 9 cut(s) 49, 232, 298, 361, 745, 988, 1052, 1126, 1234
Alw21I GWGCWC 4 cut(s) 33, 234, 492, 1236
Alw26I GTCTC 7 cut(s) 15, 101, 684, 724, 860, 890, 951
AlwI GGATC 3 cut(s) 285, 417, 597
Ama87I CYCGRG 1 cut(s) 760
AoxI GGCC 6 cut(s) 64, 123, 319, 627, 723, 1137
ApeKI GCWGC 3 cut(s) 358, 1017, 1224
ApoI RAATTY 1 cut(s) 880
AspLEI GCGC 1 cut(s) 547
AspS9I GGNCC 3 cut(s) 283, 319, 751
AsuC2I CCSGG 4 cut(s) 97, 392, 407, 631
AsuHPI GGTGA 8 cut(s) 163, 220, 253, 475, 565, 1078, 1192, 1208
AvaI CYCGRG 1 cut(s) 760
AvaII GGWCC 2 cut(s) 283, 751
BaeGI GKGCMC 1 cut(s) 822
BaeI ACNNNNGTAYC 2 cut(s) 748, 781
BalI TGGCCA 1 cut(s) 125
BanI GGYRCC 2 cut(s) 71, 817
BanII GRGCYC 4 cut(s) 234, 474, 510, 1236
BarI GAAGNNNNNNTAC 2 cut(s) 554, 586
BbsI GAAGAC 2 cut(s) 20, 447
Bbv12I GWGCWC 4 cut(s) 33, 234, 492, 1236
BbvI GCAGC 3 cut(s) 370, 1029, 1236
BccI CCATC 4 cut(s) 163, 199, 238, 380
BceAI ACGGC 5 cut(s) 11, 52, 85, 460, 1144
BcgI CGANNNNNNTGC 2 cut(s) 284, 318
BciT130I CCWGG 1 cut(s) 727
BclI TGATCA 1 cut(s) 153
BcnI CCSGG 4 cut(s) 97, 392, 407, 631
BcoDI GTCTC 7 cut(s) 15, 101, 684, 724, 860, 890, 951
BfaI CTAG 1 cut(s) 434
BfmI CTRYAG 1 cut(s) 1222
BfoI RGCGCY 1 cut(s) 548
BglI GCCNNNNNGGC 1 cut(s) 1136
BglII AGATCT 1 cut(s) 261
BisI GCNGC 6 cut(s) 292, 359, 1018, 1111, 1137, 1225
BlsI GCNGC 6 cut(s) 293, 360, 1019, 1112, 1138, 1226
Bme1390I CCNGG 5 cut(s) 97, 392, 407, 631, 727
Bme18I GGWCC 2 cut(s) 283, 751
BmeT110I CYCGRG 1 cut(s) 760
BmgBI CACGTC 1 cut(s) 337
BmgT120I GGNCC 3 cut(s) 283, 319, 751
BmiI GGNNCC 4 cut(s) 73, 580, 753, 819
BmrFI CCNGG 5 cut(s) 97, 392, 407, 631, 727
BmsI GCATC 1 cut(s) 223
BpiI GAAGAC 2 cut(s) 20, 447
BpmI CTGGAG 1 cut(s) 1226
BpuMI CCSGG 4 cut(s) 97, 392, 407, 631
Bsa29I ATCGAT 1 cut(s) 375
BsaHI GRCGYC 1 cut(s) 24
BsaWI WCCGGW 1 cut(s) 17
BsaXI ACNNNNNCTCC 4 cut(s) 12, 42, 842, 872
Bsc4I CCNNNNNNNGG 5 cut(s) 321, 328, 391, 726, 1089
Bse118I RCCGGY 2 cut(s) 321, 532
Bse1I ACTGG 1 cut(s) 1216
Bse3DI GCAATG 1 cut(s) 1131
BseBI CCWGG 1 cut(s) 727
BseCI ATCGAT 1 cut(s) 375
BseGI GGATG 3 cut(s) 171, 210, 214
BseLI CCNNNNNNNGG 5 cut(s) 321, 328, 391, 726, 1089
BseMI GCAATG 1 cut(s) 1131
BseMII CTCAG 3 cut(s) 487, 980, 1249
BseNI ACTGG 1 cut(s) 1216
BseRI GAGGAG 6 cut(s) 419, 939, 974, 989, 1052, 1118
BseSI GKGCMC 1 cut(s) 822
BseX3I CGGCCG 1 cut(s) 1137
BseXI GCAGC 3 cut(s) 370, 1029, 1236
BseYI CCCAGC 1 cut(s) 49
Bsh1236I CGCG 2 cut(s) 1006, 1244
Bsh1285I CGRYCG 2 cut(s) 1010, 1140
BshFI GGCC 6 cut(s) 66, 125, 321, 629, 725, 1139
BshNI GGYRCC 2 cut(s) 71, 817
BshVI ATCGAT 1 cut(s) 375
BsiEI CGRYCG 2 cut(s) 1010, 1140
BsiHKAI GWGCWC 4 cut(s) 33, 234, 492, 1236
BsiHKCI CYCGRG 1 cut(s) 760
BsiSI CCGG 9 cut(s) 18, 97, 322, 391, 406, 419, 533, 548, 630
BslI CCNNNNNNNGG 5 cut(s) 321, 328, 391, 726, 1089
BsmAI GTCTC 7 cut(s) 15, 101, 684, 724, 860, 890, 951
BsmBI CGTCTC 2 cut(s) 15, 101
BsmI GAATGC 2 cut(s) 63, 910
BsnI GGCC 6 cut(s) 66, 125, 321, 629, 725, 1139
BsoBI CYCGRG 1 cut(s) 760
Bsp1286I GDGCHC 7 cut(s) 33, 234, 474, 492, 510, 822, 1236
Bsp143I GATC 7 cut(s) 153, 177, 261, 277, 409, 589, 786
Bsp19I CCATGG 3 cut(s) 120, 273, 1083
BspANI GGCC 6 cut(s) 66, 125, 321, 629, 725, 1139
BspCNI CTCAG 3 cut(s) 486, 981, 1248
BspDI ATCGAT 1 cut(s) 375
BspFNI CGCG 2 cut(s) 1006, 1244
BspHI TCATGA 1 cut(s) 198
BspLI GGNNCC 4 cut(s) 73, 580, 753, 819
BspMAI CTGCAG 1 cut(s) 1226
BspPI GGATC 3 cut(s) 285, 417, 597
BspQI GCTCTTC 1 cut(s) 1067
BspT107I GGYRCC 2 cut(s) 71, 817
BsrBI CCGCTC 1 cut(s) 1110
BsrDI GCAATG 1 cut(s) 1131
BsrFI RCCGGY 2 cut(s) 321, 532
BsrI ACTGG 1 cut(s) 1216
BssAI RCCGGY 2 cut(s) 321, 532
BssMI GATC 7 cut(s) 153, 177, 261, 277, 409, 589, 786
BssNI GRCGYC 1 cut(s) 24
BssT1I CCWWGG 7 cut(s) 81, 120, 273, 315, 707, 822, 1083
Bst2UI CCWGG 1 cut(s) 727
Bst6I CTCTTC 3 cut(s) 959, 962, 1067
BstACI GRCGYC 1 cut(s) 24
BstDEI CTNAG 3 cut(s) 473, 989, 1235
BstDSI CCRYGG 5 cut(s) 34, 67, 120, 273, 1083
BstF5I GGATG 3 cut(s) 171, 210, 214
BstFNI CGCG 2 cut(s) 1006, 1244
BstH2I RGCGCY 1 cut(s) 548
BstHHI GCGC 1 cut(s) 547
BstKTI GATC 7 cut(s) 156, 180, 264, 280, 412, 592, 789
BstMAI GTCTC 7 cut(s) 15, 101, 684, 724, 860, 890, 951
BstMBI GATC 7 cut(s) 153, 177, 261, 277, 409, 589, 786
BstMCI CGRYCG 2 cut(s) 1010, 1140
BstMWI GCNNNNNNNGC 5 cut(s) 311, 496, 505, 542, 1136
BstNI CCWGG 1 cut(s) 727
BstSCI CCNGG 5 cut(s) 95, 390, 405, 629, 725
BstSFI CTRYAG 1 cut(s) 1222
BstSLI GKGCMC 1 cut(s) 822
BstUI CGCG 2 cut(s) 1006, 1244
BstV1I GCAGC 3 cut(s) 370, 1029, 1236
BstV2I GAAGAC 2 cut(s) 20, 447
BstX2I RGATCY 4 cut(s) 261, 277, 409, 589
BstXI CCANNNNNNTGG 4 cut(s) 133, 226, 280, 790
BstYI RGATCY 4 cut(s) 261, 277, 409, 589
BstZI CGGCCG 1 cut(s) 1137
Bsu15I ATCGAT 1 cut(s) 375
BsuRI GGCC 6 cut(s) 66, 125, 321, 629, 725, 1139
BsuTUI ATCGAT 1 cut(s) 375
BtgI CCRYGG 5 cut(s) 34, 67, 120, 273, 1083
BtrI CACGTC 1 cut(s) 337
BtsCI GGATG 3 cut(s) 171, 210, 214
BtsIMutI CAGTG 2 cut(s) 459, 481
CciI TCATGA 1 cut(s) 198
CfoI GCGC 1 cut(s) 547
Cfr10I RCCGGY 2 cut(s) 321, 532
Cfr13I GGNCC 3 cut(s) 283, 319, 751
ClaI ATCGAT 1 cut(s) 375
CseI GACGC 2 cut(s) 32, 1012
Csp6I GTAC 4 cut(s) 43, 88, 765, 1210
CviQI GTAC 4 cut(s) 43, 88, 765, 1210
DdeI CTNAG 3 cut(s) 473, 989, 1235
DpnI GATC 7 cut(s) 155, 179, 263, 279, 411, 591, 788
DpnII GATC 7 cut(s) 153, 177, 261, 277, 409, 589, 786
DrdI GACNNNNNNGTC 1 cut(s) 1085
DseDI GACNNNNNNGTC 1 cut(s) 1085
EaeI YGGCCR 4 cut(s) 64, 123, 627, 1137
EagI CGGCCG 1 cut(s) 1137
Eam1104I CTCTTC 3 cut(s) 959, 962, 1067
EarI CTCTTC 3 cut(s) 959, 962, 1067
EciI GGCGGA 1 cut(s) 358
Ecl136II GAGCTC 2 cut(s) 232, 1234
EclXI CGGCCG 1 cut(s) 1137
Eco130I CCWWGG 7 cut(s) 81, 120, 273, 315, 707, 822, 1083
Eco24I GRGCYC 4 cut(s) 234, 474, 510, 1236
Eco32I GATATC 1 cut(s) 1026
Eco47I GGWCC 2 cut(s) 283, 751
Eco52I CGGCCG 1 cut(s) 1137
Eco53kI GAGCTC 2 cut(s) 232, 1234
Eco57I CTGAAG 5 cut(s) 347, 434, 855, 951, 1079
Eco88I CYCGRG 1 cut(s) 760
EcoICRI GAGCTC 2 cut(s) 232, 1234
EcoRI GAATTC 1 cut(s) 880
EcoRII CCWGG 1 cut(s) 725
EcoRV GATATC 1 cut(s) 1026
EcoT14I CCWWGG 7 cut(s) 81, 120, 273, 315, 707, 822, 1083
EcoT22I ATGCAT 1 cut(s) 910
EcoT38I GRGCYC 4 cut(s) 234, 474, 510, 1236
ErhI CCWWGG 7 cut(s) 81, 120, 273, 315, 707, 822, 1083
Esp3I CGTCTC 2 cut(s) 15, 101
FauI CCCGC 3 cut(s) 711, 1249, 1282
FbaI TGATCA 1 cut(s) 153
FblI GTMKAC 1 cut(s) 399
Fnu4HI GCNGC 6 cut(s) 292, 359, 1018, 1111, 1137, 1225
FokI GGATG 3 cut(s) 178, 201, 217
FriOI GRGCYC 4 cut(s) 234, 474, 510, 1236
Fsp4HI GCNGC 6 cut(s) 292, 359, 1018, 1111, 1137, 1225
FspBI CTAG 1 cut(s) 434
GlaI GCGC 1 cut(s) 546
GluI GCNGC 6 cut(s) 292, 359, 1018, 1111, 1137, 1225
GsaI CCCAGC 1 cut(s) 53
GsuI CTGGAG 1 cut(s) 1226
HaeII RGCGCY 1 cut(s) 548
HaeIII GGCC 6 cut(s) 66, 125, 321, 629, 725, 1139
HapII CCGG 9 cut(s) 18, 97, 322, 391, 406, 419, 533, 548, 630
HgaI GACGC 2 cut(s) 32, 1012
HhaI GCGC 1 cut(s) 547
Hin1I GRCGYC 1 cut(s) 24
Hin6I GCGC 1 cut(s) 545
HinP1I GCGC 1 cut(s) 545
HindIII AAGCTT 1 cut(s) 743
HinfI GANTC 8 cut(s) 159, 345, 396, 732, 771, 794, 993, 1079
HpaII CCGG 9 cut(s) 18, 97, 322, 391, 406, 419, 533, 548, 630
HphI GGTGA 8 cut(s) 163, 220, 253, 475, 565, 1078, 1192, 1208
Hpy166II GTNNAC 2 cut(s) 88, 400
Hpy188I TCNGA 7 cut(s) 158, 287, 414, 721, 874, 931, 1238
Hpy188III TCNNGA 9 cut(s) 163, 181, 199, 647, 739, 749, 808, 1205, 1261
Hpy8I GTNNAC 2 cut(s) 88, 400
Hpy99I CGWCG 3 cut(s) 578, 1006, 1165
HpyCH4IV ACGT 2 cut(s) 102, 336
HpyCH4V TGCA 4 cut(s) 514, 908, 1224, 1294
HpyF10VI GCNNNNNNNGC 5 cut(s) 311, 496, 505, 542, 1136
HpyF3I CTNAG 3 cut(s) 473, 989, 1235
HpySE526I ACGT 2 cut(s) 102, 336
Hsp92I GRCGYC 1 cut(s) 24
HspAI GCGC 1 cut(s) 545
KroI GCCGGC 2 cut(s) 321, 532
KroNI GCCGGC 2 cut(s) 323, 534
Ksp22I TGATCA 1 cut(s) 153
Kzo9I GATC 7 cut(s) 153, 177, 261, 277, 409, 589, 786
LguI GCTCTTC 1 cut(s) 1067
LmnI GCTCC 7 cut(s) 36, 172, 229, 237, 578, 850, 985
Lsp1109I GCAGC 3 cut(s) 370, 1029, 1236
LweI GCATC 1 cut(s) 223
MaeI CTAG 1 cut(s) 434
MaeII ACGT 2 cut(s) 102, 336
MaeIII GTNAC 4 cut(s) 457, 569, 736, 1153
MalI GATC 7 cut(s) 155, 179, 263, 279, 411, 591, 788
MbiI CCGCTC 1 cut(s) 1110
MboI GATC 7 cut(s) 153, 177, 261, 277, 409, 589, 786
MflI RGATCY 4 cut(s) 261, 277, 409, 589
MhlI GDGCHC 7 cut(s) 33, 234, 474, 492, 510, 822, 1236
MlsI TGGCCA 1 cut(s) 125
MluCI AATT 3 cut(s) 655, 880, 1031
MluNI TGGCCA 1 cut(s) 125
MlyI GAGTC 6 cut(s) 168, 354, 405, 726, 788, 1073
Mox20I TGGCCA 1 cut(s) 125
Mph1103I ATGCAT 1 cut(s) 910
MreI CGCCGGCG 1 cut(s) 532
MroNI GCCGGC 2 cut(s) 321, 532
MscI TGGCCA 1 cut(s) 125
MslI CAYNNNNRTG 3 cut(s) 125, 131, 203
Msp20I TGGCCA 1 cut(s) 125
MspI CCGG 9 cut(s) 18, 97, 322, 391, 406, 419, 533, 548, 630
MspR9I CCNGG 5 cut(s) 97, 392, 407, 631, 727
Mva1269I GAATGC 2 cut(s) 63, 910
MvaI CCWGG 1 cut(s) 727
MvnI CGCG 2 cut(s) 1006, 1244
MwoI GCNNNNNNNGC 5 cut(s) 311, 496, 505, 542, 1136
NaeI GCCGGC 2 cut(s) 323, 534
NciI CCSGG 4 cut(s) 97, 392, 407, 631
NcoI CCATGG 3 cut(s) 120, 273, 1083
NdeII GATC 7 cut(s) 153, 177, 261, 277, 409, 589, 786
NgoMIV GCCGGC 2 cut(s) 321, 532
NlaIV GGNNCC 4 cut(s) 73, 580, 753, 819
NmeAIII GCCGAG 2 cut(s) 42, 1165
NmuCI GTSAC 2 cut(s) 457, 736
NsiI ATGCAT 1 cut(s) 910
PagI TCATGA 1 cut(s) 198
PciSI GCTCTTC 1 cut(s) 1067
PcsI WCGNNNNNNNCGW 2 cut(s) 42, 1010
PctI GAATGC 2 cut(s) 63, 910
PdiI GCCGGC 2 cut(s) 323, 534
PfeI GAWTC 2 cut(s) 771, 993
PflFI GACNNNGTC 2 cut(s) 1006, 1256
PkrI GCNGC 6 cut(s) 293, 360, 1019, 1112, 1138, 1226
PleI GAGTC 6 cut(s) 167, 353, 404, 726, 788, 1073
PpsI GAGTC 6 cut(s) 167, 353, 404, 726, 788, 1073
Psp124BI GAGCTC 2 cut(s) 234, 1236
Psp6I CCWGG 1 cut(s) 725
PspFI CCCAGC 1 cut(s) 49
PspGI CCWGG 1 cut(s) 725
PspN4I GGNNCC 4 cut(s) 73, 580, 753, 819
PspPI GGNCC 3 cut(s) 283, 319, 751
PsrI GAACNNNNNNTAC 2 cut(s) 1202, 1234
PstI CTGCAG 1 cut(s) 1226
PsuI RGATCY 4 cut(s) 261, 277, 409, 589
PsyI GACNNNGTC 2 cut(s) 1006, 1256
RsaI GTAC 4 cut(s) 44, 89, 766, 1211
RsaNI GTAC 4 cut(s) 43, 88, 765, 1210
RseI CAYNNNNRTG 3 cut(s) 125, 131, 203
SacI GAGCTC 2 cut(s) 234, 1236
SapI GCTCTTC 1 cut(s) 1067
SatI GCNGC 6 cut(s) 292, 359, 1018, 1111, 1137, 1225
Sau3AI GATC 7 cut(s) 153, 177, 261, 277, 409, 589, 786
Sau96I GGNCC 3 cut(s) 283, 319, 751
SchI GAGTC 6 cut(s) 168, 354, 405, 726, 788, 1073
ScrFI CCNGG 5 cut(s) 97, 392, 407, 631, 727
SduI GDGCHC 7 cut(s) 33, 234, 474, 492, 510, 822, 1236
SfaNI GCATC 1 cut(s) 223
SfcI CTRYAG 1 cut(s) 1222
SgrAI CRCCGGYG 1 cut(s) 532
SinI GGWCC 2 cut(s) 283, 751
SmiMI CAYNNNNRTG 3 cut(s) 125, 131, 203
Sse9I AATT 3 cut(s) 655, 880, 1031
SspMI CTAG 1 cut(s) 434
SstI GAGCTC 2 cut(s) 234, 1236
StyD4I CCNGG 5 cut(s) 95, 390, 405, 629, 725
StyI CCWWGG 7 cut(s) 81, 120, 273, 315, 707, 822, 1083
TaiI ACGT 2 cut(s) 105, 339
TaqI TCGA 5 cut(s) 375, 861, 939, 957, 1028
TasI AATT 3 cut(s) 655, 880, 1031
TatI WGTACW 1 cut(s) 1209
TauI GCSGC 3 cut(s) 294, 1113, 1139
TfiI GAWTC 2 cut(s) 771, 993
TscAI CASTG 2 cut(s) 466, 481
TseFI GTSAC 2 cut(s) 457, 736
TseI GCWGC 3 cut(s) 358, 1017, 1224
Tsp45I GTSAC 2 cut(s) 457, 736
TspDTI ATGAA 3 cut(s) 143, 453, 902
TspGWI ACGGA 3 cut(s) 591, 766, 908
TspRI CASTG 2 cut(s) 466, 481
Tth111I GACNNNGTC 2 cut(s) 1006, 1256
VpaK11BI GGWCC 2 cut(s) 283, 751
XapI RAATTY 1 cut(s) 880
XcmI CCANNNNNNNNNTGG 1 cut(s) 133
XmiI GTMKAC 1 cut(s) 399
XspI CTAG 1 cut(s) 434
Zsp2I ATGCAT 1 cut(s) 910
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.