Rorug01G0285600

Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
40021622 .. 40027000
5379 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0285600.1

Sequence Viewer

Length: 1746 bp
ATGGTTAAGGAAGAAAGGCCACAAATTACAAGGAGAGCAACCAGATCCTCCAATTTGGCTAAAAGTGTAGTTGAAGAAACAGATACAAGCAGTCAACACCCAAATGATGCTTCTGCGAGTTCAGACATGGTTAAAGAAGAAAGCCCACAAATCACAAGGAGAACAACCCGATCCTCTGCTTTGGCCAAATGTTCAAACAATGTAGTTGAAGAAACAAAAGCAAATAGTCAGCAGCAACTGACTTTAGATGACCTTGTGATTGGAGAAGAAGGAGAGTCCTTTAGCTTCGCTGATCTGGTGTCTAGTTTTCCTGGTAGAGATAGTCAGATCAAAGAGCTTGTGCACCTTTTGGGTCCGCAGAACTCTCCCATGCTTCCTATATTTATATATGGAGGCTCTTCCACTGGAAAAACTAGTATTGTTCTACAAACATTTAGGCATCTTAAACGACCTATTGTTTACCTAAGCTGCCTTACCTGTTATAATCCTCGAATCTTGTTTGAATCCATATTGAATCAATTGTTCCTTCACCAAAAGAATGCAGAAAATGGTTATTCTAGTGCAAAGCGCTGTGAAAAACCATCTGATTTTGTGAATTTTCTTCGCGAAGCCTTGGTTAGCATTATTGGTAATCCTCAGGGACAAAAGTCAGGATTGAGTAGCAAAAGGTCAGGAAAGGCTAGTGGAAATATGATCTACTTGATTTTTGACAATTTGGAGCGTGTCAAAGAGTGGGACAAAGGTTCTACTGTGTTACCTTTGTTGTTTAATCTCTATGATACTCTGAAAAAGCCCGAGGTCGGTCTTATCTTCATCAGCAATACCTCACCGGATACATATGACTCAAATATGGGTTATGTTGAGCCTAACCCTCTATATCTTCCTGATTATACGGATGATGATCTTGGTCAAATCTTAATGAGAAACCAAGCAAACAAAAAGCTTTATACCTCTTTTCTCAGTGTTGTACTAAGGCCTTTCAGTAGAATTACCAGACGAGTGGATGAATTGTCTAGTGCCTTTTCACTATTATTCAGAAAATATTGTGAACCTATTACTGATCTTGGGGTTGTTCCCAATGAAGAAATGAAGAGAAAGTTGTTTAGTCAATTTCAGCCCCATATTGCTCCTGCACTGAATGAGATATTTAAGGTTTCAACTCAGCCTCCCGCTGAAGTTGAAGCTAGGGAGAGAAAGCCAAGGGGTAGCACAAGGAAATCCGGAGGTTATGAAGTTGTTGACCGGTTAGATTTTCACATGTCTACTTCTGCCAAGTATCTTCTTATTTCTGCATTCCTTGCTTCAAGAAATCCAGCTACCCTTGATGCATCATTGTTCGATTCTACTGGAGGTTCTAATAATCGAAAACGAAAGAGGAAGGTCTCTGAGAAGTCAATGGAACAGAAGGAAACTGCAGAACAGGAATTACTCATGAAGGGCCCCGGAACATTCGCAATGGAGAGGTTACTAGCCATATTCCAGTGTATTACGTCCGTGGCTGAAGATCCACTTGATGATGAGGAACAAGCACAGGATGGGTTAGGAATTCAAGATGGACATTGTGGGCTCATGTCTGATGTGCTCTTACAATTGACTAGTCTCTGTGGTGCAAATTTTATTGTTAAAGGAGGAAGCTGCCCACTGGAGGGCTCAACTCGCTATCGTTCTACAGTTAGTGAAGATATGGCCCTGCAGGTAGCAAGGAGCATTAAGTTTCCTCTCTCAAAGTACTTGTACAGAAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Pfam Domains
Protein Families

Protein Analysis

581

Amino Acids

64.96

Weight (kDa)

8.21

Isoelectric Point (pI)

46.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_16 PF13191 103 - 244 5.5e-12 AAA ATPase domain
ORC5_lid PF21639 316 - 369 1.4e-11 ORC5, lid domain
ORC5_C PF14630 420 - 578 1.3e-38 Origin recognition complex (ORC) subunit 5 C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000111)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G06240
fragaria_vesca FvH4_1g04511 FvH4_1g04521 FvH4_1g05182 FvH4_1g05210 FvH4_1g05230 FvH4_1g05231 FvH4_1g05232 FvH4_1g05391 FvH4_1g05420 FvH4_2g41451 FvH4_3g15810 FvH4_3g15810 FvH4_3g18161 FvH4_3g19801 FvH4_3g39980 FvH4_3g39980 FvH4_3g39980 FvH4_3g39990 FvH4_3g40020 FvH4_3g40020 FvH4_3g40031 FvH4_3g40040 FvH4_4g32891 FvH4_5g33121 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g38210 FvH4_5g38211 FvH4_5g39231 FvH4_6g16940 FvH4_6g33181 FvH4_7g09411 FvH4_7g23271 FvH4_7g26741 FvH4_7g28012 FvH4_7g28013 FvH4_7g28031 FvH4_7g28041
malus_domestica MD03G1104200.v1.1 MD03G1139900.v1.1 MD03G1192800.v1.1 MD10G1202200.v1.1 MD11G1131100.v1.1 MD11G1202700.v1.1 MD11G1203000.v1.1
prunus_persica Prupe.2G163500_v2.0.a1 Prupe.4G140000_v2.0.a1 Prupe.4G140100_v2.0.a1 Prupe.4G222200_v2.0.a1 Prupe.4G236200_v2.0.a1 Prupe.4G236300_v2.0.a1 Prupe.4G236400_v2.0.a1 Prupe.4G237500_v2.0.a1 Prupe.6G125500_v2.0.a1
pyrus_communis pycom03g14510 pycom05g20120 pycom11g10840 pycom11g17520 pycom11g17590 pycom15g03310
rosa_chinensis RchiOBHm_Chr0c44g0503541 RchiOBHm_Chr2g0090931 RchiOBHm_Chr2g0090941 RchiOBHm_Chr2g0090951 RchiOBHm_Chr2g0090961 RchiOBHm_Chr2g0092791 RchiOBHm_Chr2g0099041 RchiOBHm_Chr2g0169971 RchiOBHm_Chr2g0170021 RchiOBHm_Chr4g0386131 RchiOBHm_Chr4g0386141 RchiOBHm_Chr4g0386161 RchiOBHm_Chr4g0386281 RchiOBHm_Chr4g0386291 RchiOBHm_Chr4g0440811 RchiOBHm_Chr5g0026601 RchiOBHm_Chr5g0026621 RchiOBHm_Chr5g0026871 RchiOBHm_Chr5g0072021 RchiOBHm_Chr5g0072031 RchiOBHm_Chr5g0072171 RchiOBHm_Chr5g0072181 RchiOBHm_Chr7g0231281 RchiOBHm_Chr7g0231301 RchiOBHm_Chr7g0240141
rosa_laevigata RLG00000000695 RLG00000001421 RLG00000004300 RLG00000006148 RLG00000006151 RLG00000016157 RLG00000016158 RLG00000016159 RLG00000016160 RLG00000016161 RLG00000020474 RLG00000021915 RLG00000029159 RLG00000032939 RLG00000032940 RLG00000032966 RLG00000036270 RLG00000036272 RLG00000036280 RLG00000036284
rosa_multiflora Rmu_co8434269.1_g000001 Rmu_sc0000792.1_g000017 Rmu_sc0000792.1_g000018 Rmu_sc0000792.1_g000019 Rmu_sc0001132.1_g000008 Rmu_sc0001152.1_g000004 Rmu_sc0001152.1_g000033 Rmu_sc0001583.1_g000004 Rmu_sc0003305.1_g000001 Rmu_sc0003333.1_g000005 Rmu_sc0003396.1_g000010 Rmu_sc0003396.1_g000011 Rmu_sc0003396.1_g000017 Rmu_sc0004571.1_g000004 Rmu_sc0004851.1_g000003 Rmu_sc0004851.1_g000004 Rmu_sc0005008.1_g000015 Rmu_sc0006854.1_g000016 Rmu_sc0006854.1_g000023 Rmu_sc0009422.1_g000009 Rmu_sc0010610.1_g000003 Rmu_sc0018952.1_g000008 Rmu_sc0037136.1_g000001 Rmu_ssc0000172.1_g000016 Rmu_ssc0000389.1_g000005
rosa_roxburghii Rroxscaffold_1G00009050 Rroxscaffold_1G00009090 Rroxscaffold_1G00009130 Rroxscaffold_1G00009230 Rroxscaffold_1G00044650 Rroxscaffold_1G00052600 Rroxscaffold_1G00052610 Rroxscaffold_1G00052860 Rroxscaffold_1G00052880 Rroxscaffold_2G00081700 Rroxscaffold_2G00148820 Rroxscaffold_2G00150560 Rroxscaffold_2G00150570 Rroxscaffold_2G00150590 Rroxscaffold_2G00150600 Rroxscaffold_2G00150630 Rroxscaffold_2G00150730 Rroxscaffold_2G00150740 Rroxscaffold_3G00229360 Rroxscaffold_3G00262430 Rroxscaffold_4G00313090 Rroxscaffold_5G00381610
rosa_rugosa Rorug01G0285600 Rorug02G0011200 Rorug02G0011300 Rorug02G0011400 Rorug02G0012500 Rorug02G0012600 Rorug02G0012700 Rorug02G0029300 Rorug02G0075800 Rorug02G0075900 Rorug02G0419600 Rorug02G0544800 Rorug04G0112200 Rorug05G0094100 Rorug05G0094100 Rorug05G0094200 Rorug05G0415900 Rorug05G0415900 Rorug05G0416000 Rorug05G0416100 Rorug05G0416200 Rorug05G0416300 Rorug05G0416700 Rorug05G0416800 Rorug07G0265700 Rorug07G0265800 Rorug07G0265900 Rorug07G0266000 Rorug07G0266100
rosa_samantha Rh2AG057300 Rh2AG057400 Rh2AG058700 Rh2AG478800 Rh2AG616800 Rh2DG056700 Rh2DG056800 Rh2DG056900 Rh2DG073500 Rh2DG129700 Rh2DG639800 Rh4AG380100 Rh4DG386700 Rh5AG187500 Rh5AG187700 Rh5AG189200 Rh5AG472100 Rh5AG472800 Rh5BG184000 Rh5BG184200 Rh5BG185800 Rh5BG186500 Rh5CG204000 Rh5CG205800 Rh5DG186300 Rh5DG186500 Rh5DG188100 Rh5DG503500 Rh5DG503700 Rh5DG504000 Rh5DG504100 Rh5DG504700 Rh5DG504900 Rh5DG505000 Rh7AG419500 Rh7AG419800 Rh7CG439300 Rh7DG413100
rosa_wichuraiana Rw0G002880 Rw1G026240 Rw2G005200 Rw2G005210 Rw2G005820 Rw2G009640 Rw5G016980 Rw5G017000 Rw5G017190 Rw5G043880 Rw7G011300 Rw7G034680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 483
Acc36I ACCTGC 1 cut(s) 1684
AccI GTMKAC 1 cut(s) 1262
AccII CGCG 1 cut(s) 606
AccIII TCCGGA 1 cut(s) 1220
AciI CCGC 2 cut(s) 356, 1170
AclWI GGATC 3 cut(s) 39, 165, 1499
AcoI YGGCCR 1 cut(s) 183
AcsI RAATTY 3 cut(s) 595, 1545, 1612
AcuI CTGAAG 2 cut(s) 1194, 1521
AfaI GTAC 3 cut(s) 969, 1730, 1736
AfeI AGCGCT 1 cut(s) 569
AfiI CCNNNNNNNGG 3 cut(s) 800, 1645, 1646
AflIII ACRYGT 1 cut(s) 1257
AgeI ACCGGT 1 cut(s) 1242
AgsI TTSAA 9 cut(s) 74, 195, 209, 503, 514, 1158, 1181, 1305, 1550
AhlI ACTAGT 2 cut(s) 413, 1595
AjnI CCWGG 1 cut(s) 310
AjuI GAANNNNNNNTTGG 2 cut(s) 94, 126
AluBI AGCT 7 cut(s) 285, 337, 468, 943, 1184, 1316, 1635
AluI AGCT 7 cut(s) 285, 337, 468, 943, 1184, 1316, 1635
Alw21I GWGCWC 2 cut(s) 345, 1584
Alw26I GTCTC 2 cut(s) 1387, 1604
Alw44I GTGCAC 1 cut(s) 341
AlwI GGATC 3 cut(s) 39, 165, 1499
AlwNI CAGNNNCTG 1 cut(s) 238
Ama87I CYCGRG 1 cut(s) 794
Aor13HI TCCGGA 1 cut(s) 1220
Aor51HI AGCGCT 1 cut(s) 569
AoxI GGCC 5 cut(s) 17, 183, 974, 1438, 1686
ApaI GGGCCC 1 cut(s) 1442
ApaLI GTGCAC 1 cut(s) 341
ApeKI GCWGC 3 cut(s) 232, 468, 1635
ApoI RAATTY 3 cut(s) 595, 1545, 1612
AsiGI ACCGGT 1 cut(s) 1242
AspLEI GCGC 1 cut(s) 570
AspS9I GGNCC 4 cut(s) 353, 1438, 1439, 1687
AsuC2I CCSGG 1 cut(s) 1443
AsuHPI GGTGA 2 cut(s) 521, 819
AvaI CYCGRG 1 cut(s) 794
AvaII GGWCC 1 cut(s) 353
AxyI CCTNAGG 1 cut(s) 636
BaeGI GKGCMC 2 cut(s) 345, 1442
BalI TGGCCA 1 cut(s) 185
BanII GRGCYC 3 cut(s) 1442, 1569, 1652
Bbv12I GWGCWC 2 cut(s) 345, 1584
BbvI GCAGC 3 cut(s) 244, 455, 1622
BccI CCATC 3 cut(s) 589, 1529, 1547
BciT130I CCWGG 1 cut(s) 312
BciVI GTATCC 1 cut(s) 826
BcnI CCSGG 1 cut(s) 1443
BcoDI GTCTC 2 cut(s) 1387, 1604
BcuI ACTAGT 2 cut(s) 413, 1595
BfaI CTAG 8 cut(s) 303, 414, 558, 681, 1014, 1185, 1469, 1596
BfmI CTRYAG 3 cut(s) 1413, 1668, 1691
BfoI RGCGCY 1 cut(s) 571
BfuAI ACCTGC 1 cut(s) 1684
BfuI GTATCC 1 cut(s) 826
BisI GCNGC 3 cut(s) 233, 469, 1636
BlsI GCNGC 3 cut(s) 234, 470, 1637
BmcAI AGTACT 1 cut(s) 1730
Bme1390I CCNGG 2 cut(s) 312, 1443
Bme18I GGWCC 1 cut(s) 353
BmeT110I CYCGRG 1 cut(s) 794
BmgT120I GGNCC 4 cut(s) 353, 1438, 1439, 1687
BmiI GGNNCC 3 cut(s) 354, 1440, 1441
BmrFI CCNGG 2 cut(s) 312, 1443
BmsI GCATC 4 cut(s) 97, 448, 1315, 1337
BoxI GACNNNNGTC 1 cut(s) 646
BpmI CTGGAG 2 cut(s) 1368, 1664
Bpu10I CCTNAGC 1 cut(s) 464
BpuMI CCSGG 1 cut(s) 1443
BsaBI GATNNNNATC 1 cut(s) 900
BsaI GGTCTC 1 cut(s) 1387
BsaJI CCNNGG 5 cut(s) 612, 795, 1199, 1441, 1494
BsaWI WCCGGW 3 cut(s) 829, 1220, 1242
BsaXI ACNNNNNCTCC 2 cut(s) 1150, 1180
Bsc4I CCNNNNNNNGG 3 cut(s) 800, 1645, 1646
Bse118I RCCGGY 1 cut(s) 1242
Bse1I ACTGG 4 cut(s) 409, 1351, 1480, 1647
Bse21I CCTNAGG 1 cut(s) 636
Bse3DI GCAATG 1 cut(s) 1461
Bse8I GATNNNNATC 1 cut(s) 900
BseAI TCCGGA 1 cut(s) 1220
BseBI CCWGG 1 cut(s) 312
BseDI CCNNGG 5 cut(s) 612, 795, 1199, 1441, 1494
BseGI GGATG 3 cut(s) 901, 1009, 1540
BseJI GATNNNNATC 1 cut(s) 900
BseLI CCNNNNNNNGG 3 cut(s) 800, 1645, 1646
BseMI GCAATG 1 cut(s) 1461
BseMII CTCAG 4 cut(s) 650, 973, 1175, 1377
BseNI ACTGG 4 cut(s) 409, 1351, 1480, 1647
BseSI GKGCMC 2 cut(s) 345, 1442
BseXI GCAGC 3 cut(s) 244, 455, 1622
BsgI GTGCAG 1 cut(s) 1116
Bsh1236I CGCG 1 cut(s) 606
BshFI GGCC 5 cut(s) 19, 185, 976, 1440, 1688
BshTI ACCGGT 1 cut(s) 1242
BsiHKAI GWGCWC 2 cut(s) 345, 1584
BsiHKCI CYCGRG 1 cut(s) 794
BsiSI CCGG 4 cut(s) 830, 1221, 1243, 1443
BslFI GGGAC 2 cut(s) 654, 749
BslI CCNNNNNNNGG 3 cut(s) 800, 1645, 1646
BsmAI GTCTC 2 cut(s) 1387, 1604
BsmFI GGGAC 2 cut(s) 654, 749
BsmI GAATGC 2 cut(s) 544, 1292
BsnI GGCC 5 cut(s) 19, 185, 976, 1440, 1688
Bso31I GGTCTC 1 cut(s) 1387
BsoBI CYCGRG 1 cut(s) 794
Bsp120I GGGCCC 1 cut(s) 1438
Bsp1286I GDGCHC 5 cut(s) 345, 1442, 1569, 1584, 1652
Bsp13I TCCGGA 1 cut(s) 1220
Bsp1407I TGTACA 1 cut(s) 1734
Bsp143I GATC 8 cut(s) 44, 170, 292, 327, 693, 901, 1060, 1504
Bsp68I TCGCGA 1 cut(s) 606
BspACI CCGC 2 cut(s) 356, 1170
BspANI GGCC 5 cut(s) 19, 185, 976, 1440, 1688
BspCNI CTCAG 4 cut(s) 649, 972, 1174, 1378
BspEI TCCGGA 1 cut(s) 1220
BspFNI CGCG 1 cut(s) 606
BspHI TCATGA 1 cut(s) 1431
BspLI GGNNCC 3 cut(s) 354, 1440, 1441
BspMAI CTGCAG 2 cut(s) 1417, 1695
BspMI ACCTGC 1 cut(s) 1684
BspPI GGATC 3 cut(s) 39, 165, 1499
BspQI GCTCTTC 1 cut(s) 403
BspTNI GGTCTC 1 cut(s) 1387
BsrDI GCAATG 1 cut(s) 1461
BsrFI RCCGGY 1 cut(s) 1242
BsrGI TGTACA 1 cut(s) 1734
BsrI ACTGG 4 cut(s) 409, 1351, 1480, 1647
BssAI RCCGGY 1 cut(s) 1242
BssECI CCNNGG 5 cut(s) 612, 795, 1199, 1441, 1494
BssMI GATC 8 cut(s) 44, 170, 292, 327, 693, 901, 1060, 1504
BssT1I CCWWGG 2 cut(s) 612, 1199
Bst2UI CCWGG 1 cut(s) 312
Bst4CI ACNGT 2 cut(s) 751, 1672
Bst6I CTCTTC 2 cut(s) 403, 1085
BstAPI GCANNNNNTGC 1 cut(s) 1298
BstAUI TGTACA 1 cut(s) 1734
BstDEI CTNAG 6 cut(s) 464, 636, 959, 971, 1161, 1386
BstDSI CCRYGG 1 cut(s) 1494
BstF5I GGATG 3 cut(s) 901, 1009, 1540
BstFNI CGCG 1 cut(s) 606
BstH2I RGCGCY 1 cut(s) 571
BstHHI GCGC 1 cut(s) 570
BstKTI GATC 8 cut(s) 47, 173, 295, 330, 696, 904, 1063, 1507
BstMAI GTCTC 2 cut(s) 1387, 1604
BstMBI GATC 8 cut(s) 44, 170, 292, 327, 693, 901, 1060, 1504
BstMWI GCNNNNNNNGC 2 cut(s) 1298, 1656
BstNI CCWGG 1 cut(s) 312
BstNSI RCATGY 1 cut(s) 1261
BstPAI GACNNNNGTC 1 cut(s) 646
BstSCI CCNGG 2 cut(s) 310, 1441
BstSFI CTRYAG 3 cut(s) 1413, 1668, 1691
BstSLI GKGCMC 2 cut(s) 345, 1442
BstUI CGCG 1 cut(s) 606
BstV1I GCAGC 3 cut(s) 244, 455, 1622
BstX2I RGATCY 2 cut(s) 44, 1504
BstXI CCANNNNNNTGG 1 cut(s) 1000
BstYI RGATCY 2 cut(s) 44, 1504
Bsu36I CCTNAGG 1 cut(s) 636
BsuI GTATCC 1 cut(s) 826
BsuRI GGCC 5 cut(s) 19, 185, 976, 1440, 1688
BtgI CCRYGG 1 cut(s) 1494
BtsCI GGATG 3 cut(s) 901, 1009, 1540
BtsIMutI CAGTG 5 cut(s) 402, 967, 1133, 1487, 1640
BtuMI TCGCGA 1 cut(s) 606
BveI ACCTGC 1 cut(s) 1684
CaiI CAGNNNCTG 1 cut(s) 238
CciI TCATGA 1 cut(s) 1431
CfoI GCGC 1 cut(s) 570
Cfr10I RCCGGY 1 cut(s) 1242
Cfr13I GGNCC 4 cut(s) 353, 1438, 1439, 1687
Csp6I GTAC 3 cut(s) 968, 1729, 1735
CspAI ACCGGT 1 cut(s) 1242
CviAII CATG 5 cut(s) 127, 370, 1258, 1432, 1570
CviQI GTAC 3 cut(s) 968, 1729, 1735
DdeI CTNAG 6 cut(s) 464, 636, 959, 971, 1161, 1386
DpnI GATC 8 cut(s) 46, 172, 294, 329, 695, 903, 1062, 1506
DpnII GATC 8 cut(s) 44, 170, 292, 327, 693, 901, 1060, 1504
EaeI YGGCCR 1 cut(s) 183
Eam1104I CTCTTC 2 cut(s) 403, 1085
EarI CTCTTC 2 cut(s) 403, 1085
Eco130I CCWWGG 2 cut(s) 612, 1199
Eco147I AGGCCT 1 cut(s) 976
Eco24I GRGCYC 3 cut(s) 1442, 1569, 1652
Eco31I GGTCTC 1 cut(s) 1387
Eco47I GGWCC 1 cut(s) 353
Eco47III AGCGCT 1 cut(s) 569
Eco57I CTGAAG 2 cut(s) 1194, 1521
Eco81I CCTNAGG 1 cut(s) 636
Eco88I CYCGRG 1 cut(s) 794
EcoO109I RGGNCCY 2 cut(s) 1438, 1439
EcoRI GAATTC 1 cut(s) 1545
EcoRII CCWGG 1 cut(s) 310
EcoT14I CCWWGG 2 cut(s) 612, 1199
EcoT22I ATGCAT 1 cut(s) 1330
EcoT38I GRGCYC 3 cut(s) 1442, 1569, 1652
ErhI CCWWGG 2 cut(s) 612, 1199
FaeI CATG 5 cut(s) 130, 373, 1261, 1435, 1573
FalI AAGNNNNNCTT 2 cut(s) 1494, 1526
FaqI GGGAC 2 cut(s) 654, 749
FatI CATG 5 cut(s) 126, 369, 1257, 1431, 1569
FauI CCCGC 1 cut(s) 1177
FauNDI CATATG 1 cut(s) 838
FblI GTMKAC 1 cut(s) 1262
Fnu4HI GCNGC 3 cut(s) 233, 469, 1636
FokI GGATG 3 cut(s) 908, 1016, 1547
FriOI GRGCYC 3 cut(s) 1442, 1569, 1652
Fsp4HI GCNGC 3 cut(s) 233, 469, 1636
FspBI CTAG 8 cut(s) 303, 414, 558, 681, 1014, 1185, 1469, 1596
GlaI GCGC 1 cut(s) 569
GluI GCNGC 3 cut(s) 233, 469, 1636
GsuI CTGGAG 2 cut(s) 1368, 1664
HaeII RGCGCY 1 cut(s) 571
HaeIII GGCC 5 cut(s) 19, 185, 976, 1440, 1688
HapII CCGG 4 cut(s) 830, 1221, 1243, 1443
HhaI GCGC 1 cut(s) 570
Hin1II CATG 5 cut(s) 130, 373, 1261, 1435, 1573
Hin6I GCGC 1 cut(s) 568
HinP1I GCGC 1 cut(s) 568
HincII GTYRAC 2 cut(s) 95, 1240
HindII GTYRAC 2 cut(s) 95, 1240
HindIII AAGCTT 1 cut(s) 941
HinfI GANTC 6 cut(s) 275, 492, 503, 514, 842, 1340
HpaII CCGG 4 cut(s) 830, 1221, 1243, 1443
HphI GGTGA 2 cut(s) 521, 819
Hpy166II GTNNAC 6 cut(s) 95, 343, 460, 1049, 1240, 1263
Hpy188I TCNGA 7 cut(s) 124, 327, 586, 786, 1037, 1387, 1576
Hpy188III TCNNGA 8 cut(s) 605, 651, 672, 884, 1221, 1305, 1432, 1550
Hpy8I GTNNAC 6 cut(s) 95, 343, 460, 1049, 1240, 1263
HpyAV CCTTC 5 cut(s) 263, 536, 1372, 1399, 1429
HpyCH4III ACNGT 2 cut(s) 751, 1672
HpyCH4IV ACGT 1 cut(s) 1490
HpyCH4V TGCA 9 cut(s) 343, 542, 563, 1133, 1292, 1328, 1415, 1610, 1693
HpyF10VI GCNNNNNNNGC 2 cut(s) 1298, 1656
HpyF3I CTNAG 6 cut(s) 464, 636, 959, 971, 1161, 1386
HpySE526I ACGT 1 cut(s) 1490
Hsp92II CATG 5 cut(s) 130, 373, 1261, 1435, 1573
HspAI GCGC 1 cut(s) 568
Kpn2I TCCGGA 1 cut(s) 1220
Kzo9I GATC 8 cut(s) 44, 170, 292, 327, 693, 901, 1060, 1504
LguI GCTCTTC 1 cut(s) 403
LmnI GCTCC 3 cut(s) 718, 1132, 1704
Lsp1109I GCAGC 3 cut(s) 244, 455, 1622
LweI GCATC 4 cut(s) 97, 448, 1315, 1337
MaeI CTAG 8 cut(s) 303, 414, 558, 681, 1014, 1185, 1469, 1596
MaeII ACGT 1 cut(s) 1490
MaeIII GTNAC 2 cut(s) 753, 1464
MalI GATC 8 cut(s) 46, 172, 294, 329, 695, 903, 1062, 1506
MboI GATC 8 cut(s) 44, 170, 292, 327, 693, 901, 1060, 1504
MfeI CAATTG 2 cut(s) 518, 1589
MflI RGATCY 2 cut(s) 44, 1504
MhlI GDGCHC 5 cut(s) 345, 1442, 1569, 1584, 1652
MlsI TGGCCA 1 cut(s) 185
MluNI TGGCCA 1 cut(s) 185
MlyI GAGTC 2 cut(s) 284, 836
Mox20I TGGCCA 1 cut(s) 185
Mph1103I ATGCAT 1 cut(s) 1330
MroI TCCGGA 1 cut(s) 1220
MscI TGGCCA 1 cut(s) 185
MseI TTAA 8 cut(s) 6, 132, 444, 768, 917, 1149, 1623, 1710
MslI CAYNNNNRTG 1 cut(s) 102
Msp20I TGGCCA 1 cut(s) 185
MspA1I CMGCKG 1 cut(s) 1172
MspI CCGG 4 cut(s) 830, 1221, 1243, 1443
MspR9I CCNGG 2 cut(s) 312, 1443
MunI CAATTG 2 cut(s) 518, 1589
Mva1269I GAATGC 2 cut(s) 544, 1292
MvaI CCWGG 1 cut(s) 312
MvnI CGCG 1 cut(s) 606
MwoI GCNNNNNNNGC 2 cut(s) 1298, 1656
NciI CCSGG 1 cut(s) 1443
NdeI CATATG 1 cut(s) 838
NdeII GATC 8 cut(s) 44, 170, 292, 327, 693, 901, 1060, 1504
NlaIII CATG 5 cut(s) 130, 373, 1261, 1435, 1573
NlaIV GGNNCC 3 cut(s) 354, 1440, 1441
NruI TCGCGA 1 cut(s) 606
NsiI ATGCAT 1 cut(s) 1330
NspI RCATGY 1 cut(s) 1261
PagI TCATGA 1 cut(s) 1431
PceI AGGCCT 1 cut(s) 976
PciI ACATGT 1 cut(s) 1257
PciSI GCTCTTC 1 cut(s) 403
PctI GAATGC 2 cut(s) 544, 1292
PfeI GAWTC 4 cut(s) 492, 503, 514, 1340
PinAI ACCGGT 1 cut(s) 1242
PkrI GCNGC 3 cut(s) 234, 470, 1637
PleI GAGTC 2 cut(s) 283, 836
PpsI GAGTC 2 cut(s) 283, 836
PscI ACATGT 1 cut(s) 1257
PshAI GACNNNNGTC 1 cut(s) 646
PsiI TTATAA 1 cut(s) 483
Psp6I CCWGG 1 cut(s) 310
PspGI CCWGG 1 cut(s) 310
PspN4I GGNNCC 3 cut(s) 354, 1440, 1441
PspOMI GGGCCC 1 cut(s) 1438
PspPI GGNCC 4 cut(s) 353, 1438, 1439, 1687
PsrI GAACNNNNNNTAC 2 cut(s) 1410, 1442
PstI CTGCAG 2 cut(s) 1417, 1695
PstNI CAGNNNCTG 1 cut(s) 238
PsuI RGATCY 2 cut(s) 44, 1504
RruI TCGCGA 1 cut(s) 606
RsaI GTAC 3 cut(s) 969, 1730, 1736
RsaNI GTAC 3 cut(s) 968, 1729, 1735
RseI CAYNNNNRTG 1 cut(s) 102
SapI GCTCTTC 1 cut(s) 403
SaqAI TTAA 8 cut(s) 6, 132, 444, 768, 917, 1149, 1623, 1710
SatI GCNGC 3 cut(s) 233, 469, 1636
Sau3AI GATC 8 cut(s) 44, 170, 292, 327, 693, 901, 1060, 1504
Sau96I GGNCC 4 cut(s) 353, 1438, 1439, 1687
SbfI CCTGCAGG 1 cut(s) 1695
ScaI AGTACT 1 cut(s) 1730
SchI GAGTC 2 cut(s) 284, 836
ScrFI CCNGG 2 cut(s) 312, 1443
SdaI CCTGCAGG 1 cut(s) 1695
SduI GDGCHC 5 cut(s) 345, 1442, 1569, 1584, 1652
SfaNI GCATC 4 cut(s) 97, 448, 1315, 1337
SfcI CTRYAG 3 cut(s) 1413, 1668, 1691
SinI GGWCC 1 cut(s) 353
SmiMI CAYNNNNRTG 1 cut(s) 102
SpeI ACTAGT 2 cut(s) 413, 1595
Sse8387I CCTGCAGG 1 cut(s) 1695
SseBI AGGCCT 1 cut(s) 976
SsiI CCGC 2 cut(s) 356, 1170
SspI AATATT 1 cut(s) 1043
SspMI CTAG 8 cut(s) 303, 414, 558, 681, 1014, 1185, 1469, 1596
StuI AGGCCT 1 cut(s) 976
StyD4I CCNGG 2 cut(s) 310, 1441
StyI CCWWGG 2 cut(s) 612, 1199
TaaI ACNGT 2 cut(s) 751, 1672
TaiI ACGT 1 cut(s) 1493
TaqI TCGA 3 cut(s) 490, 1338, 1363
TaqII GACCGA 1 cut(s) 791
TatI WGTACW 3 cut(s) 967, 1728, 1734
TfiI GAWTC 4 cut(s) 492, 503, 514, 1340
Tru1I TTAA 8 cut(s) 6, 132, 444, 768, 917, 1149, 1623, 1710
Tru9I TTAA 8 cut(s) 6, 132, 444, 768, 917, 1149, 1623, 1710
TscAI CASTG 5 cut(s) 409, 967, 1140, 1487, 1647
TseI GCWGC 3 cut(s) 232, 468, 1635
TspDTI ATGAA 6 cut(s) 802, 1020, 1095, 1103, 1245, 1448
TspGWI ACGGA 2 cut(s) 908, 1483
TspRI CASTG 5 cut(s) 409, 967, 1140, 1487, 1647
VneI GTGCAC 1 cut(s) 341
VpaK11BI GGWCC 1 cut(s) 353
XapI RAATTY 3 cut(s) 595, 1545, 1612
XceI RCATGY 1 cut(s) 1261
XmiI GTMKAC 1 cut(s) 1262
XspI CTAG 8 cut(s) 303, 414, 558, 681, 1014, 1185, 1469, 1596
ZrmI AGTACT 1 cut(s) 1730
Zsp2I ATGCAT 1 cut(s) 1330
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.