Rroxscaffold_1G00009050

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000111
Physical Location & Seq
Forward (+)
11357511 .. 11358644
1134 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00009050.1

Sequence Viewer

Length: 1134 bp
ATGGGGGATCGAGGAAAGTTGACGCAACTTCCAACCCTCCCGAAGGACATTATCCCCGAAATTCTAGCCTGGCTTGAAGTAAAGCCCCTGTGCCGATTCAGGTGCGTGTCGAAGTCCTGGAATTCTCTGATTTCTGAATCCGGTTTTGTAAAATTGCACTCTAGCAAAGCCATTGAGCATGAGCAGGTGCTTCGCCAAAGACAAAGAGTCATAGCCACTGGTGAACGCGGTAAAGTTTACACATATGACCTCGATGAGTTTTTCGATCAAGTTGATCTAGATAATCCTGAGGGTCAGGTAGAAGTCTCTGAGTATGAGTCGGATAGCATAGGTGATAATCTTAATGACAGTGATTCATTAGGCACCGAGTCTGAGTTGGATGACCAGCTGGATGATGATTCTTATGATAGTGATGATGACATGCATTCCTGCTTGCCGTTTTACTCCAATGGCTTGGTGCTGAAGTACTTGTCAAATTTTGATAAGTTTAAGTTATATAAGCTATTTGGCTTTGGATTTGATTCCTCCTGCCTAGATTACAAGATGGTTTGTGGGGAGTACTACCGATATGAACTTTGGCTCAGTGTATACTCGTTGAAAACCGGTTCTTGGAGAGTCATTCCAAGGGGATATGACTATGGGGCTTTAGATTTAAAATCTAATATGGAAGGGATACTACTAAATGGAAATATTCATTGGTTGGTTCGTAGAAAAGACAGTGCATCGTCCATGGTTCTGGTGTCTTTTCTTGTTGCAGAGAAAATGGTTCGGACTATTCCGCTGCCGCCTGGTTTCAATTCTGAAGGTGGTGATTATTATCTGACTGTCTTTAGGGAATGTCTATGTGTGGCAGTGAAGGGGGGTCCAGAGTATTGGATCATGAACGAATATGGAGTGAGAGAATCTTGGACTCAACAAAGAATGTCCGTCCCTAGTTCCCGATGGTTACATTTAGGTTTCAGGAAAAACAATCATGAACTGGTGTACTTCGATGACCGTCAGCGTTTGGTTATGTACAATTTTAATGAAGATCGCTTTTGCAATCTACCCTTTTGTGATCATCCCGGAATTAAGTTTGCTGCGATCTATGTGGAGACCATTTTTTCACTCAATTGCTATCGCGGCATTGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

377

Amino Acids

43.7

Weight (kDa)

4.96

Isoelectric Point (pI)

40.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 11 - 46 2.2e-06 F-box-like
F-box PF00646 12 - 49 1.5e-09 F-box domain
FBA_1 PF07734 162 - 339 2.4e-14 F-box associated beta propeller domain
FBA_3 PF08268 171 - 325 2.5e-07 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000111)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G06240
fragaria_vesca FvH4_1g04511 FvH4_1g04521 FvH4_1g05182 FvH4_1g05210 FvH4_1g05230 FvH4_1g05231 FvH4_1g05232 FvH4_1g05391 FvH4_1g05420 FvH4_2g41451 FvH4_3g15810 FvH4_3g15810 FvH4_3g18161 FvH4_3g19801 FvH4_3g39980 FvH4_3g39980 FvH4_3g39980 FvH4_3g39990 FvH4_3g40020 FvH4_3g40020 FvH4_3g40031 FvH4_3g40040 FvH4_4g32891 FvH4_5g33121 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g38210 FvH4_5g38211 FvH4_5g39231 FvH4_6g16940 FvH4_6g33181 FvH4_7g09411 FvH4_7g23271 FvH4_7g26741 FvH4_7g28012 FvH4_7g28013 FvH4_7g28031 FvH4_7g28041
malus_domestica MD03G1104200.v1.1 MD03G1139900.v1.1 MD03G1192800.v1.1 MD10G1202200.v1.1 MD11G1131100.v1.1 MD11G1202700.v1.1 MD11G1203000.v1.1
prunus_persica Prupe.2G163500_v2.0.a1 Prupe.4G140000_v2.0.a1 Prupe.4G140100_v2.0.a1 Prupe.4G222200_v2.0.a1 Prupe.4G236200_v2.0.a1 Prupe.4G236300_v2.0.a1 Prupe.4G236400_v2.0.a1 Prupe.4G237500_v2.0.a1 Prupe.6G125500_v2.0.a1
pyrus_communis pycom03g14510 pycom05g20120 pycom11g10840 pycom11g17520 pycom11g17590 pycom15g03310
rosa_chinensis RchiOBHm_Chr0c44g0503541 RchiOBHm_Chr2g0090931 RchiOBHm_Chr2g0090941 RchiOBHm_Chr2g0090951 RchiOBHm_Chr2g0090961 RchiOBHm_Chr2g0092791 RchiOBHm_Chr2g0099041 RchiOBHm_Chr2g0169971 RchiOBHm_Chr2g0170021 RchiOBHm_Chr4g0386131 RchiOBHm_Chr4g0386141 RchiOBHm_Chr4g0386161 RchiOBHm_Chr4g0386281 RchiOBHm_Chr4g0386291 RchiOBHm_Chr4g0440811 RchiOBHm_Chr5g0026601 RchiOBHm_Chr5g0026621 RchiOBHm_Chr5g0026871 RchiOBHm_Chr5g0072021 RchiOBHm_Chr5g0072031 RchiOBHm_Chr5g0072171 RchiOBHm_Chr5g0072181 RchiOBHm_Chr7g0231281 RchiOBHm_Chr7g0231301 RchiOBHm_Chr7g0240141
rosa_laevigata RLG00000000695 RLG00000001421 RLG00000004300 RLG00000006148 RLG00000006151 RLG00000016157 RLG00000016158 RLG00000016159 RLG00000016160 RLG00000016161 RLG00000020474 RLG00000021915 RLG00000029159 RLG00000032939 RLG00000032940 RLG00000032966 RLG00000036270 RLG00000036272 RLG00000036280 RLG00000036284
rosa_multiflora Rmu_co8434269.1_g000001 Rmu_sc0000792.1_g000017 Rmu_sc0000792.1_g000018 Rmu_sc0000792.1_g000019 Rmu_sc0001132.1_g000008 Rmu_sc0001152.1_g000004 Rmu_sc0001152.1_g000033 Rmu_sc0001583.1_g000004 Rmu_sc0003305.1_g000001 Rmu_sc0003333.1_g000005 Rmu_sc0003396.1_g000010 Rmu_sc0003396.1_g000011 Rmu_sc0003396.1_g000017 Rmu_sc0004571.1_g000004 Rmu_sc0004851.1_g000003 Rmu_sc0004851.1_g000004 Rmu_sc0005008.1_g000015 Rmu_sc0006854.1_g000016 Rmu_sc0006854.1_g000023 Rmu_sc0009422.1_g000009 Rmu_sc0010610.1_g000003 Rmu_sc0018952.1_g000008 Rmu_sc0037136.1_g000001 Rmu_ssc0000172.1_g000016 Rmu_ssc0000389.1_g000005
rosa_roxburghii Rroxscaffold_1G00009050 Rroxscaffold_1G00009090 Rroxscaffold_1G00009130 Rroxscaffold_1G00009230 Rroxscaffold_1G00044650 Rroxscaffold_1G00052600 Rroxscaffold_1G00052610 Rroxscaffold_1G00052860 Rroxscaffold_1G00052880 Rroxscaffold_2G00081700 Rroxscaffold_2G00148820 Rroxscaffold_2G00150560 Rroxscaffold_2G00150570 Rroxscaffold_2G00150590 Rroxscaffold_2G00150600 Rroxscaffold_2G00150630 Rroxscaffold_2G00150730 Rroxscaffold_2G00150740 Rroxscaffold_3G00229360 Rroxscaffold_3G00262430 Rroxscaffold_4G00313090 Rroxscaffold_5G00381610
rosa_rugosa Rorug01G0285600 Rorug02G0011200 Rorug02G0011300 Rorug02G0011400 Rorug02G0012500 Rorug02G0012600 Rorug02G0012700 Rorug02G0029300 Rorug02G0075800 Rorug02G0075900 Rorug02G0419600 Rorug02G0544800 Rorug04G0112200 Rorug05G0094100 Rorug05G0094100 Rorug05G0094200 Rorug05G0415900 Rorug05G0415900 Rorug05G0416000 Rorug05G0416100 Rorug05G0416200 Rorug05G0416300 Rorug05G0416700 Rorug05G0416800 Rorug07G0265700 Rorug07G0265800 Rorug07G0265900 Rorug07G0266000 Rorug07G0266100
rosa_samantha Rh2AG057300 Rh2AG057400 Rh2AG058700 Rh2AG478800 Rh2AG616800 Rh2DG056700 Rh2DG056800 Rh2DG056900 Rh2DG073500 Rh2DG129700 Rh2DG639800 Rh4AG380100 Rh4DG386700 Rh5AG187500 Rh5AG187700 Rh5AG189200 Rh5AG472100 Rh5AG472800 Rh5BG184000 Rh5BG184200 Rh5BG185800 Rh5BG186500 Rh5CG204000 Rh5CG205800 Rh5DG186300 Rh5DG186500 Rh5DG188100 Rh5DG503500 Rh5DG503700 Rh5DG504000 Rh5DG504100 Rh5DG504700 Rh5DG504900 Rh5DG505000 Rh7AG419500 Rh7AG419800 Rh7CG439300 Rh7DG413100
rosa_wichuraiana Rw0G002880 Rw1G026240 Rw2G005200 Rw2G005210 Rw2G005820 Rw2G009640 Rw5G016980 Rw5G017000 Rw5G017190 Rw5G043880 Rw7G011300 Rw7G034680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 175
Acc36I ACCTGC 1 cut(s) 175
AccB1I GGYRCC 1 cut(s) 362
AccI GTMKAC 1 cut(s) 588
AccII CGCG 2 cut(s) 228, 1122
AciI CCGC 4 cut(s) 228, 779, 785, 1122
AclWI GGATC 2 cut(s) 15, 884
AcsI RAATTY 3 cut(s) 60, 121, 475
AcuI CTGAAG 2 cut(s) 482, 822
AfaI GTAC 4 cut(s) 467, 560, 986, 1016
AfiI CCNNNNNNNGG 2 cut(s) 43, 609
AgeI ACCGGT 1 cut(s) 602
AgsI TTSAA 3 cut(s) 77, 598, 796
AhdI GACNNNNNGTC 1 cut(s) 206
AjnI CCWGG 3 cut(s) 68, 116, 787
AjuI GAANNNNNNNTTGG 2 cut(s) 679, 711
AluBI AGCT 2 cut(s) 388, 502
AluI AGCT 2 cut(s) 388, 502
Alw26I GTCTC 2 cut(s) 310, 1088
AlwI GGATC 2 cut(s) 15, 884
ApeKI GCWGC 2 cut(s) 781, 1079
ApoI RAATTY 3 cut(s) 60, 121, 475
AsiGI ACCGGT 1 cut(s) 602
AspS9I GGNCC 1 cut(s) 863
AsuC2I CCSGG 1 cut(s) 1065
AsuHPI GGTGA 3 cut(s) 233, 344, 821
AvaII GGWCC 1 cut(s) 863
AxyI CCTNAGG 1 cut(s) 288
BanI GGYRCC 1 cut(s) 362
BarI GAAGNNNNNNTAC 2 cut(s) 660, 692
BbvI GCAGC 2 cut(s) 768, 1066
BccI CCATC 2 cut(s) 538, 936
BceAI ACGGC 1 cut(s) 421
BcgI CGANNNNNNTGC 4 cut(s) 84, 118, 173, 207
BciT130I CCWGG 3 cut(s) 70, 118, 789
BciVI GTATCC 1 cut(s) 666
BclI TGATCA 1 cut(s) 1057
BcnI CCSGG 1 cut(s) 1065
BcoDI GTCTC 2 cut(s) 310, 1088
BfaI CTAG 5 cut(s) 65, 162, 278, 533, 933
BfuAI ACCTGC 1 cut(s) 175
BfuI GTATCC 1 cut(s) 666
BisI GCNGC 4 cut(s) 782, 785, 1080, 1123
BlsI GCNGC 4 cut(s) 783, 786, 1081, 1124
BmcAI AGTACT 2 cut(s) 467, 560
Bme1390I CCNGG 4 cut(s) 70, 118, 789, 1065
Bme18I GGWCC 1 cut(s) 863
BmeRI GACNNNNNGTC 1 cut(s) 206
BmgT120I GGNCC 1 cut(s) 863
BmiI GGNNCC 2 cut(s) 364, 864
BmrFI CCNGG 4 cut(s) 70, 118, 789, 1065
BmsI GCATC 1 cut(s) 731
BpuMI CCSGG 1 cut(s) 1065
BsaBI GATNNNNATC 1 cut(s) 816
BsaI GGTCTC 1 cut(s) 1088
BsaJI CCNNGG 2 cut(s) 623, 729
BsaWI WCCGGW 2 cut(s) 140, 602
Bsc4I CCNNNNNNNGG 2 cut(s) 43, 609
Bse118I RCCGGY 1 cut(s) 602
Bse1I ACTGG 2 cut(s) 223, 984
Bse21I CCTNAGG 1 cut(s) 288
Bse8I GATNNNNATC 1 cut(s) 816
BseBI CCWGG 3 cut(s) 70, 118, 789
BseDI CCNNGG 2 cut(s) 623, 729
BseGI GGATG 3 cut(s) 385, 397, 1060
BseJI GATNNNNATC 1 cut(s) 816
BseLI CCNNNNNNNGG 2 cut(s) 43, 609
BseMII CTCAG 4 cut(s) 279, 300, 363, 595
BseNI ACTGG 2 cut(s) 223, 984
BseXI GCAGC 2 cut(s) 768, 1066
Bsh1236I CGCG 2 cut(s) 228, 1122
BshNI GGYRCC 1 cut(s) 362
BshTI ACCGGT 1 cut(s) 602
BsiSI CCGG 3 cut(s) 141, 603, 1065
BslFI GGGAC 1 cut(s) 914
BslI CCNNNNNNNGG 2 cut(s) 43, 609
BsmAI GTCTC 2 cut(s) 310, 1088
BsmFI GGGAC 1 cut(s) 914
BsmI GAATGC 1 cut(s) 424
Bso31I GGTCTC 1 cut(s) 1088
Bsp1407I TGTACA 1 cut(s) 1014
Bsp143I GATC 7 cut(s) 7, 265, 274, 876, 1030, 1057, 1083
Bsp19I CCATGG 1 cut(s) 729
BspACI CCGC 4 cut(s) 228, 779, 785, 1122
BspCNI CTCAG 4 cut(s) 280, 301, 364, 594
BspFNI CGCG 2 cut(s) 228, 1122
BspHI TCATGA 2 cut(s) 879, 973
BspLI GGNNCC 2 cut(s) 364, 864
BspMI ACCTGC 1 cut(s) 175
BspPI GGATC 2 cut(s) 15, 884
BspT107I GGYRCC 1 cut(s) 362
BspTNI GGTCTC 1 cut(s) 1088
BsrFI RCCGGY 1 cut(s) 602
BsrGI TGTACA 1 cut(s) 1014
BsrI ACTGG 2 cut(s) 223, 984
BssAI RCCGGY 1 cut(s) 602
BssECI CCNNGG 2 cut(s) 623, 729
BssMI GATC 7 cut(s) 7, 265, 274, 876, 1030, 1057, 1083
BssNAI GTATAC 1 cut(s) 589
BssT1I CCWWGG 2 cut(s) 623, 729
Bst1107I GTATAC 1 cut(s) 589
Bst2UI CCWGG 3 cut(s) 70, 118, 789
Bst4CI ACNGT 4 cut(s) 350, 719, 826, 998
BstAUI TGTACA 1 cut(s) 1014
BstC8I GCNNGC 1 cut(s) 434
BstDEI CTNAG 4 cut(s) 288, 309, 372, 581
BstDSI CCRYGG 1 cut(s) 729
BstENI CCTNNNNNAGG 1 cut(s) 41
BstF5I GGATG 3 cut(s) 385, 397, 1060
BstFNI CGCG 2 cut(s) 228, 1122
BstKTI GATC 7 cut(s) 10, 268, 277, 879, 1033, 1060, 1086
BstMAI GTCTC 2 cut(s) 310, 1088
BstMBI GATC 7 cut(s) 7, 265, 274, 876, 1030, 1057, 1083
BstMWI GCNNNNNNNGC 1 cut(s) 1122
BstNI CCWGG 3 cut(s) 70, 118, 789
BstNSI RCATGY 1 cut(s) 424
BstSCI CCNGG 4 cut(s) 68, 116, 787, 1063
BstUI CGCG 2 cut(s) 228, 1122
BstV1I GCAGC 2 cut(s) 768, 1066
BstXI CCANNNNNNTGG 3 cut(s) 454, 736, 873
BstZ17I GTATAC 1 cut(s) 589
Bsu36I CCTNAGG 1 cut(s) 288
BsuI GTATCC 1 cut(s) 666
BtgI CCRYGG 1 cut(s) 729
BtsCI GGATG 3 cut(s) 385, 397, 1060
BtsI GCAGTG 1 cut(s) 858
BtsIMutI CAGTG 5 cut(s) 216, 355, 589, 724, 858
BveI ACCTGC 1 cut(s) 175
Cac8I GCNNGC 1 cut(s) 434
CciI TCATGA 2 cut(s) 879, 973
Cfr10I RCCGGY 1 cut(s) 602
Cfr13I GGNCC 1 cut(s) 863
CseI GACGC 1 cut(s) 31
Csp6I GTAC 4 cut(s) 466, 559, 985, 1015
CspAI ACCGGT 1 cut(s) 602
CviAII CATG 5 cut(s) 179, 421, 730, 880, 974
CviQI GTAC 4 cut(s) 466, 559, 985, 1015
DdeI CTNAG 4 cut(s) 288, 309, 372, 581
DpnI GATC 7 cut(s) 9, 267, 276, 878, 1032, 1059, 1085
DpnII GATC 7 cut(s) 7, 265, 274, 876, 1030, 1057, 1083
DraI TTTAAA 1 cut(s) 654
DriI GACNNNNNGTC 1 cut(s) 206
Eam1105I GACNNNNNGTC 1 cut(s) 206
Eco130I CCWWGG 2 cut(s) 623, 729
Eco31I GGTCTC 1 cut(s) 1088
Eco47I GGWCC 1 cut(s) 863
Eco57I CTGAAG 2 cut(s) 482, 822
Eco81I CCTNAGG 1 cut(s) 288
EcoNI CCTNNNNNAGG 1 cut(s) 41
EcoRI GAATTC 1 cut(s) 121
EcoRII CCWGG 3 cut(s) 68, 116, 787
EcoT14I CCWWGG 2 cut(s) 623, 729
EcoT22I ATGCAT 1 cut(s) 426
ErhI CCWWGG 2 cut(s) 623, 729
FaeI CATG 5 cut(s) 182, 424, 733, 883, 977
FaqI GGGAC 1 cut(s) 914
FatI CATG 5 cut(s) 178, 420, 729, 879, 973
FauNDI CATATG 1 cut(s) 244
FbaI TGATCA 1 cut(s) 1057
FblI GTMKAC 1 cut(s) 588
Fnu4HI GCNGC 4 cut(s) 782, 785, 1080, 1123
FokI GGATG 3 cut(s) 392, 404, 1047
Fsp4HI GCNGC 4 cut(s) 782, 785, 1080, 1123
FspBI CTAG 5 cut(s) 65, 162, 278, 533, 933
GluI GCNGC 4 cut(s) 782, 785, 1080, 1123
HapII CCGG 3 cut(s) 141, 603, 1065
HgaI GACGC 1 cut(s) 31
Hin1II CATG 5 cut(s) 182, 424, 733, 883, 977
HincII GTYRAC 1 cut(s) 21
HindII GTYRAC 1 cut(s) 21
HpaII CCGG 3 cut(s) 141, 603, 1065
HphI GGTGA 3 cut(s) 233, 344, 821
Hpy166II GTNNAC 5 cut(s) 21, 224, 238, 589, 985
Hpy188I TCNGA 8 cut(s) 129, 136, 310, 322, 373, 771, 802, 822
Hpy188III TCNNGA 8 cut(s) 40, 278, 287, 866, 880, 939, 961, 974
Hpy8I GTNNAC 5 cut(s) 21, 224, 238, 589, 985
HpyAV CCTTC 4 cut(s) 37, 662, 797, 850
HpyCH4III ACNGT 4 cut(s) 350, 719, 826, 998
HpyCH4V TGCA 5 cut(s) 157, 424, 722, 755, 1041
HpyF10VI GCNNNNNNNGC 1 cut(s) 1122
HpyF3I CTNAG 4 cut(s) 288, 309, 372, 581
Hsp92II CATG 5 cut(s) 182, 424, 733, 883, 977
Ksp22I TGATCA 1 cut(s) 1057
Kzo9I GATC 7 cut(s) 7, 265, 274, 876, 1030, 1057, 1083
Lsp1109I GCAGC 2 cut(s) 768, 1066
LweI GCATC 1 cut(s) 731
MaeI CTAG 5 cut(s) 65, 162, 278, 533, 933
MaeIII GTNAC 1 cut(s) 945
MalI GATC 7 cut(s) 9, 267, 276, 878, 1032, 1059, 1085
MboI GATC 7 cut(s) 7, 265, 274, 876, 1030, 1057, 1083
MboII GAAGA 1 cut(s) 1040
MfeI CAATTG 1 cut(s) 1111
MluCI AATT 8 cut(s) 60, 121, 152, 475, 796, 1018, 1068, 1111
MlyI GAGTC 5 cut(s) 216, 326, 377, 624, 904
MmeI TCCRAC 3 cut(s) 56, 300, 357
MnlI CCTC 5 cut(s) 5, 47, 260, 283, 535
Mph1103I ATGCAT 1 cut(s) 426
MseI TTAA 5 cut(s) 342, 489, 653, 1023, 1071
MspA1I CMGCKG 2 cut(s) 388, 781
MspI CCGG 3 cut(s) 141, 603, 1065
MspR9I CCNGG 4 cut(s) 70, 118, 789, 1065
MunI CAATTG 1 cut(s) 1111
Mva1269I GAATGC 1 cut(s) 424
MvaI CCWGG 3 cut(s) 70, 118, 789
MvnI CGCG 2 cut(s) 228, 1122
MwoI GCNNNNNNNGC 1 cut(s) 1122
NciI CCSGG 1 cut(s) 1065
NcoI CCATGG 1 cut(s) 729
NdeI CATATG 1 cut(s) 244
NdeII GATC 7 cut(s) 7, 265, 274, 876, 1030, 1057, 1083
NlaIII CATG 5 cut(s) 182, 424, 733, 883, 977
NlaIV GGNNCC 2 cut(s) 364, 864
NsiI ATGCAT 1 cut(s) 426
NspI RCATGY 1 cut(s) 424
PagI TCATGA 2 cut(s) 879, 973
PaqCI CACCTGC 1 cut(s) 175
PctI GAATGC 1 cut(s) 424
PfeI GAWTC 6 cut(s) 96, 137, 353, 398, 521, 902
PfoI TCCNGGA 2 cut(s) 116, 1063
PinAI ACCGGT 1 cut(s) 602
PkrI GCNGC 4 cut(s) 783, 786, 1081, 1124
PleI GAGTC 5 cut(s) 215, 325, 376, 623, 904
PpsI GAGTC 5 cut(s) 215, 325, 376, 623, 904
Psp6I CCWGG 3 cut(s) 68, 116, 787
PspGI CCWGG 3 cut(s) 68, 116, 787
PspN4I GGNNCC 2 cut(s) 364, 864
PspPI GGNCC 1 cut(s) 863
PvuII CAGCTG 1 cut(s) 388
RsaI GTAC 4 cut(s) 467, 560, 986, 1016
RsaNI GTAC 4 cut(s) 466, 559, 985, 1015
SaqAI TTAA 5 cut(s) 342, 489, 653, 1023, 1071
SatI GCNGC 4 cut(s) 782, 785, 1080, 1123
Sau3AI GATC 7 cut(s) 7, 265, 274, 876, 1030, 1057, 1083
Sau96I GGNCC 1 cut(s) 863
ScaI AGTACT 2 cut(s) 467, 560
SchI GAGTC 5 cut(s) 216, 326, 377, 624, 904
ScrFI CCNGG 4 cut(s) 70, 118, 789, 1065
SetI ASST 9 cut(s) 104, 189, 252, 300, 334, 390, 504, 808, 958
SfaNI GCATC 1 cut(s) 731
SinI GGWCC 1 cut(s) 863
Sse9I AATT 8 cut(s) 60, 121, 152, 475, 796, 1018, 1068, 1111
SsiI CCGC 4 cut(s) 228, 779, 785, 1122
SspI AATATT 1 cut(s) 691
SspMI CTAG 5 cut(s) 65, 162, 278, 533, 933
StyD4I CCNGG 4 cut(s) 68, 116, 787, 1063
StyI CCWWGG 2 cut(s) 623, 729
TaaI ACNGT 4 cut(s) 350, 719, 826, 998
TaqI TCGA 5 cut(s) 10, 110, 252, 264, 990
TasI AATT 8 cut(s) 60, 121, 152, 475, 796, 1018, 1068, 1111
TatI WGTACW 4 cut(s) 465, 558, 984, 1014
TauI GCSGC 2 cut(s) 787, 1125
TfiI GAWTC 6 cut(s) 96, 137, 353, 398, 521, 902
Tru1I TTAA 5 cut(s) 342, 489, 653, 1023, 1071
Tru9I TTAA 5 cut(s) 342, 489, 653, 1023, 1071
TscAI CASTG 5 cut(s) 223, 355, 589, 724, 858
TseI GCWGC 2 cut(s) 781, 1079
TspDTI ATGAA 6 cut(s) 345, 585, 683, 896, 990, 1041
TspGWI ACGGA 1 cut(s) 916
TspRI CASTG 5 cut(s) 223, 355, 589, 724, 858
VpaK11BI GGWCC 1 cut(s) 863
XagI CCTNNNNNAGG 1 cut(s) 41
XapI RAATTY 3 cut(s) 60, 121, 475
XbaI TCTAGA 1 cut(s) 277
XceI RCATGY 1 cut(s) 424
XmiI GTMKAC 1 cut(s) 588
XspI CTAG 5 cut(s) 65, 162, 278, 533, 933
ZrmI AGTACT 2 cut(s) 467, 560
Zsp2I ATGCAT 1 cut(s) 426
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.