FvH4_7g09411

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000111
Physical Location & Seq
Reverse (-)
9045945 .. 9047153
1209 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g09411.t1

Sequence Viewer

Length: 1209 bp
ATGGAAGAACATGGCGAGCTTCCACCCGAGATTATTGATGATATTCTTTTAAGGCTACCAGCCAAGTCCTTATGCCGCTTCAAGTGTGTATCAAAACCATGGAAAGCCCTGATATCTGATCATGATTTTGTTATCAAGCACATCAATAGAGCCACTGAGAACAAAGATGTATTCCTCCAAAGAAGAAGAGTGATATTTACCGACTCCGCAGATAAGGGTCTATACACTATGGACCTGGACGAGTTCCTCAAAAATCATAATCATGTCGGTGATATTGGTGACGATTATGATGCAGATGAACAAGTAGCTGCGACTGAGCTCGATTATATTTACCGTGAGCAGCCAAGTGTTCGAGTTTCGTTCTTCCATTCCTGTGATGGTCTAATTCTCCTCGAGTTATCTAATGCAGAGTTATATTTGGTTAACCCTGCAACAAGTGAATCCAAGCATCTACCAAAACCACGACAAGATCGTGACTTGTCTGCCAATTATAATTATCACCTATATGGGTTTGGTTTTGATTCCTCCACTTCTCAGTACCAGTTGGTTCGGGGAGACATCTTTGTACCTGATGAAAACCTTCATCGGATAGGAACTGTGATAAGTGTCTTTAACTTCGAAGCTGATTCCTGGCGACATATACCAGGATTATCGCATGGTTACTTTCCTGCAAGTTCACAGTTGCATCGAAACGAAAATGGGGTCCTGTTGCATGGTCGTTTCCATTGGTTGATGGCGCCCTTCGCCAGAGTCCAAGGAGATGAAGAATACGTGATTTTAGTTTTCAATCCAACGATGATTGATGAGACTCGAGAAATTCAACTACCGCTTGAATTATCCGGTGGCAGTCAATTGGTAAAAGTAGGGGCCTTCAGAGAGTGGCTATGCATAACATTTGCGACAGAAGAGCCCCATGATGTAGAAACATATACCGAGTTTTGGGTCATGAAGGAATATGGAGTGAGGGAGTCGTGGACTAAAATGAGGGTCTCCATTCCTTATACCGAGTTATACCACTCTGGTTTCTGGACTGAATCTCATGATTTGATGTTTTCTGGAGAACGGTTACTTCTGTACAATTTTGATGAAGAAGATCCTCAAATCCGAAAGTTATCAGTTCGTGAAACTGGCAGAGTTGGTAGAGTTGGCGTATACATTGAGAGCCTTGTCTCAGTTAGGGATCTCAACATCATGAGAATACAAACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

403

Amino Acids

46.68

Weight (kDa)

5.18

Isoelectric Point (pI)

38.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 6 - 45 3.3e-10 F-box domain
F-box-like PF12937 6 - 44 1e-07 F-box-like
FBA_3 PF08268 112 - 336 3.8e-09 F-box associated beta propeller domain
FBA_1 PF07734 113 - 391 2.9e-21 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000111)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G06240
fragaria_vesca FvH4_1g04511 FvH4_1g04521 FvH4_1g05182 FvH4_1g05210 FvH4_1g05230 FvH4_1g05231 FvH4_1g05232 FvH4_1g05391 FvH4_1g05420 FvH4_2g41451 FvH4_3g15810 FvH4_3g15810 FvH4_3g18161 FvH4_3g19801 FvH4_3g39980 FvH4_3g39980 FvH4_3g39980 FvH4_3g39990 FvH4_3g40020 FvH4_3g40020 FvH4_3g40031 FvH4_3g40040 FvH4_4g32891 FvH4_5g33121 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g38210 FvH4_5g38211 FvH4_5g39231 FvH4_6g16940 FvH4_6g33181 FvH4_7g09411 FvH4_7g23271 FvH4_7g26741 FvH4_7g28012 FvH4_7g28013 FvH4_7g28031 FvH4_7g28041
malus_domestica MD03G1104200.v1.1 MD03G1139900.v1.1 MD03G1192800.v1.1 MD10G1202200.v1.1 MD11G1131100.v1.1 MD11G1202700.v1.1 MD11G1203000.v1.1
prunus_persica Prupe.2G163500_v2.0.a1 Prupe.4G140000_v2.0.a1 Prupe.4G140100_v2.0.a1 Prupe.4G222200_v2.0.a1 Prupe.4G236200_v2.0.a1 Prupe.4G236300_v2.0.a1 Prupe.4G236400_v2.0.a1 Prupe.4G237500_v2.0.a1 Prupe.6G125500_v2.0.a1
pyrus_communis pycom03g14510 pycom05g20120 pycom11g10840 pycom11g17520 pycom11g17590 pycom15g03310
rosa_chinensis RchiOBHm_Chr0c44g0503541 RchiOBHm_Chr2g0090931 RchiOBHm_Chr2g0090941 RchiOBHm_Chr2g0090951 RchiOBHm_Chr2g0090961 RchiOBHm_Chr2g0092791 RchiOBHm_Chr2g0099041 RchiOBHm_Chr2g0169971 RchiOBHm_Chr2g0170021 RchiOBHm_Chr4g0386131 RchiOBHm_Chr4g0386141 RchiOBHm_Chr4g0386161 RchiOBHm_Chr4g0386281 RchiOBHm_Chr4g0386291 RchiOBHm_Chr4g0440811 RchiOBHm_Chr5g0026601 RchiOBHm_Chr5g0026621 RchiOBHm_Chr5g0026871 RchiOBHm_Chr5g0072021 RchiOBHm_Chr5g0072031 RchiOBHm_Chr5g0072171 RchiOBHm_Chr5g0072181 RchiOBHm_Chr7g0231281 RchiOBHm_Chr7g0231301 RchiOBHm_Chr7g0240141
rosa_laevigata RLG00000000695 RLG00000001421 RLG00000004300 RLG00000006148 RLG00000006151 RLG00000016157 RLG00000016158 RLG00000016159 RLG00000016160 RLG00000016161 RLG00000020474 RLG00000021915 RLG00000029159 RLG00000032939 RLG00000032940 RLG00000032966 RLG00000036270 RLG00000036272 RLG00000036280 RLG00000036284
rosa_multiflora Rmu_co8434269.1_g000001 Rmu_sc0000792.1_g000017 Rmu_sc0000792.1_g000018 Rmu_sc0000792.1_g000019 Rmu_sc0001132.1_g000008 Rmu_sc0001152.1_g000004 Rmu_sc0001152.1_g000033 Rmu_sc0001583.1_g000004 Rmu_sc0003305.1_g000001 Rmu_sc0003333.1_g000005 Rmu_sc0003396.1_g000010 Rmu_sc0003396.1_g000011 Rmu_sc0003396.1_g000017 Rmu_sc0004571.1_g000004 Rmu_sc0004851.1_g000003 Rmu_sc0004851.1_g000004 Rmu_sc0005008.1_g000015 Rmu_sc0006854.1_g000016 Rmu_sc0006854.1_g000023 Rmu_sc0009422.1_g000009 Rmu_sc0010610.1_g000003 Rmu_sc0018952.1_g000008 Rmu_sc0037136.1_g000001 Rmu_ssc0000172.1_g000016 Rmu_ssc0000389.1_g000005
rosa_roxburghii Rroxscaffold_1G00009050 Rroxscaffold_1G00009090 Rroxscaffold_1G00009130 Rroxscaffold_1G00009230 Rroxscaffold_1G00044650 Rroxscaffold_1G00052600 Rroxscaffold_1G00052610 Rroxscaffold_1G00052860 Rroxscaffold_1G00052880 Rroxscaffold_2G00081700 Rroxscaffold_2G00148820 Rroxscaffold_2G00150560 Rroxscaffold_2G00150570 Rroxscaffold_2G00150590 Rroxscaffold_2G00150600 Rroxscaffold_2G00150630 Rroxscaffold_2G00150730 Rroxscaffold_2G00150740 Rroxscaffold_3G00229360 Rroxscaffold_3G00262430 Rroxscaffold_4G00313090 Rroxscaffold_5G00381610
rosa_rugosa Rorug01G0285600 Rorug02G0011200 Rorug02G0011300 Rorug02G0011400 Rorug02G0012500 Rorug02G0012600 Rorug02G0012700 Rorug02G0029300 Rorug02G0075800 Rorug02G0075900 Rorug02G0419600 Rorug02G0544800 Rorug04G0112200 Rorug05G0094100 Rorug05G0094100 Rorug05G0094200 Rorug05G0415900 Rorug05G0415900 Rorug05G0416000 Rorug05G0416100 Rorug05G0416200 Rorug05G0416300 Rorug05G0416700 Rorug05G0416800 Rorug07G0265700 Rorug07G0265800 Rorug07G0265900 Rorug07G0266000 Rorug07G0266100
rosa_samantha Rh2AG057300 Rh2AG057400 Rh2AG058700 Rh2AG478800 Rh2AG616800 Rh2DG056700 Rh2DG056800 Rh2DG056900 Rh2DG073500 Rh2DG129700 Rh2DG639800 Rh4AG380100 Rh4DG386700 Rh5AG187500 Rh5AG187700 Rh5AG189200 Rh5AG472100 Rh5AG472800 Rh5BG184000 Rh5BG184200 Rh5BG185800 Rh5BG186500 Rh5CG204000 Rh5CG205800 Rh5DG186300 Rh5DG186500 Rh5DG188100 Rh5DG503500 Rh5DG503700 Rh5DG504000 Rh5DG504100 Rh5DG504700 Rh5DG504900 Rh5DG505000 Rh7AG419500 Rh7AG419800 Rh7CG439300 Rh7DG413100
rosa_wichuraiana Rw0G002880 Rw1G026240 Rw2G005200 Rw2G005210 Rw2G005820 Rw2G009640 Rw5G016980 Rw5G017000 Rw5G017190 Rw5G043880 Rw7G011300 Rw7G034680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 492
AccB1I GGYRCC 1 cut(s) 736
AccI GTMKAC 1 cut(s) 1152
AciI CCGC 3 cut(s) 76, 207, 827
AclWI GGATC 2 cut(s) 1088, 1188
AcsI RAATTY 1 cut(s) 816
AcuI CTGAAG 1 cut(s) 856
AcyI GRCGYC 1 cut(s) 737
AfaI GTAC 3 cut(s) 539, 567, 1076
AfiI CCNNNNNNNGG 1 cut(s) 939
AgsI TTSAA 4 cut(s) 82, 787, 821, 833
AjnI CCWGG 3 cut(s) 234, 629, 643
AluBI AGCT 4 cut(s) 19, 308, 319, 623
AluI AGCT 4 cut(s) 19, 308, 319, 623
Alw21I GWGCWC 1 cut(s) 321
Alw26I GTCTC 4 cut(s) 549, 800, 994, 1174
AlwI GGATC 2 cut(s) 1088, 1188
Ama87I CYCGRG 3 cut(s) 26, 392, 810
AoxI GGCC 1 cut(s) 867
ApeKI GCWGC 2 cut(s) 308, 340
ApoI RAATTY 1 cut(s) 816
ArsI GACNNNNNNTTYG 2 cut(s) 687, 719
Asp700I GAANNNNTTC 1 cut(s) 579
AspLEI GCGC 1 cut(s) 739
AspS9I GGNCC 3 cut(s) 232, 703, 867
AsuHPI GGTGA 3 cut(s) 281, 290, 491
AsuII TTCGAA 1 cut(s) 618
AvaI CYCGRG 3 cut(s) 26, 392, 810
AvaII GGWCC 2 cut(s) 232, 703
BanI GGYRCC 1 cut(s) 736
BanII GRGCYC 2 cut(s) 321, 912
Bbv12I GWGCWC 1 cut(s) 321
BbvI GCAGC 2 cut(s) 295, 352
BccI CCATC 2 cut(s) 371, 727
BcgI CGANNNNNNTGC 2 cut(s) 272, 306
BciT130I CCWGG 3 cut(s) 236, 631, 645
BclI TGATCA 1 cut(s) 118
BcoDI GTCTC 4 cut(s) 549, 800, 994, 1174
BfoI RGCGCY 1 cut(s) 740
BisI GCNGC 3 cut(s) 76, 309, 341
BlsI GCNGC 3 cut(s) 77, 310, 342
Bme1390I CCNGG 3 cut(s) 236, 631, 645
Bme18I GGWCC 2 cut(s) 232, 703
BmeT110I CYCGRG 3 cut(s) 26, 392, 810
BmgT120I GGNCC 3 cut(s) 232, 703, 867
BmiI GGNNCC 3 cut(s) 704, 738, 868
BmrFI CCNGG 3 cut(s) 236, 631, 645
BmsI GCATC 3 cut(s) 280, 457, 694
BpmI CTGGAG 1 cut(s) 1077
Bpu14I TTCGAA 1 cut(s) 618
BsaAI YACGTR 1 cut(s) 772
BsaHI GRCGYC 1 cut(s) 737
BsaI GGTCTC 1 cut(s) 994
BsaJI CCNNGG 2 cut(s) 98, 754
BsaWI WCCGGW 1 cut(s) 839
Bsc4I CCNNNNNNNGG 1 cut(s) 939
Bse1I ACTGG 2 cut(s) 541, 1132
BseBI CCWGG 3 cut(s) 236, 631, 645
BseDI CCNNGG 2 cut(s) 98, 754
BseLI CCNNNNNNNGG 1 cut(s) 939
BseMII CTCAG 4 cut(s) 147, 306, 548, 1185
BseNI ACTGG 2 cut(s) 541, 1132
BseRI GAGGAG 1 cut(s) 380
BseXI GCAGC 2 cut(s) 295, 352
BshFI GGCC 1 cut(s) 869
BshNI GGYRCC 1 cut(s) 736
BsiHKAI GWGCWC 1 cut(s) 321
BsiHKCI CYCGRG 3 cut(s) 26, 392, 810
BsiSI CCGG 1 cut(s) 840
BslI CCNNNNNNNGG 1 cut(s) 939
BsmAI GTCTC 4 cut(s) 549, 800, 994, 1174
BsnI GGCC 1 cut(s) 869
Bso31I GGTCTC 1 cut(s) 994
BsoBI CYCGRG 3 cut(s) 26, 392, 810
Bsp119I TTCGAA 1 cut(s) 618
Bsp1286I GDGCHC 2 cut(s) 321, 912
Bsp1407I TGTACA 1 cut(s) 1074
Bsp143I GATC 4 cut(s) 118, 469, 1093, 1180
Bsp19I CCATGG 1 cut(s) 98
BspACI CCGC 3 cut(s) 76, 207, 827
BspANI GGCC 1 cut(s) 869
BspCNI CTCAG 4 cut(s) 148, 307, 547, 1184
BspHI TCATGA 4 cut(s) 121, 945, 1039, 1191
BspLI GGNNCC 3 cut(s) 704, 738, 868
BspPI GGATC 2 cut(s) 1088, 1188
BspQI GCTCTTC 1 cut(s) 900
BspT104I TTCGAA 1 cut(s) 618
BspT107I GGYRCC 1 cut(s) 736
BspTNI GGTCTC 1 cut(s) 994
BsrGI TGTACA 1 cut(s) 1074
BsrI ACTGG 2 cut(s) 541, 1132
BssECI CCNNGG 2 cut(s) 98, 754
BssMI GATC 4 cut(s) 118, 469, 1093, 1180
BssNAI GTATAC 1 cut(s) 1153
BssNI GRCGYC 1 cut(s) 737
BssT1I CCWWGG 2 cut(s) 98, 754
Bst1107I GTATAC 1 cut(s) 1153
Bst2UI CCWGG 3 cut(s) 236, 631, 645
Bst4CI ACNGT 4 cut(s) 335, 598, 681, 1065
Bst6I CTCTTC 2 cut(s) 181, 900
BstACI GRCGYC 1 cut(s) 737
BstAUI TGTACA 1 cut(s) 1074
BstBAI YACGTR 1 cut(s) 772
BstBI TTCGAA 1 cut(s) 618
BstC8I GCNNGC 1 cut(s) 17
BstDEI CTNAG 4 cut(s) 156, 315, 534, 1171
BstDSI CCRYGG 1 cut(s) 98
BstH2I RGCGCY 1 cut(s) 740
BstHHI GCGC 1 cut(s) 739
BstKTI GATC 4 cut(s) 121, 472, 1096, 1183
BstMAI GTCTC 4 cut(s) 549, 800, 994, 1174
BstMBI GATC 4 cut(s) 118, 469, 1093, 1180
BstMWI GCNNNNNNNGC 1 cut(s) 743
BstNI CCWGG 3 cut(s) 236, 631, 645
BstSCI CCNGG 3 cut(s) 234, 629, 643
BstV1I GCAGC 2 cut(s) 295, 352
BstX2I RGATCY 2 cut(s) 1093, 1180
BstYI RGATCY 2 cut(s) 1093, 1180
BstZ17I GTATAC 1 cut(s) 1153
BsuRI GGCC 1 cut(s) 869
BtgI CCRYGG 1 cut(s) 98
BtsIMutI CAGTG 1 cut(s) 153
Cac8I GCNNGC 1 cut(s) 17
CciI TCATGA 4 cut(s) 121, 945, 1039, 1191
CfoI GCGC 1 cut(s) 739
Cfr13I GGNCC 3 cut(s) 232, 703, 867
Csp6I GTAC 3 cut(s) 538, 566, 1075
CviQI GTAC 3 cut(s) 538, 566, 1075
DdeI CTNAG 4 cut(s) 156, 315, 534, 1171
DinI GGCGCC 1 cut(s) 738
DpnI GATC 4 cut(s) 120, 471, 1095, 1182
DpnII GATC 4 cut(s) 118, 469, 1093, 1180
Eam1104I CTCTTC 2 cut(s) 181, 900
EarI CTCTTC 2 cut(s) 181, 900
Ecl136II GAGCTC 1 cut(s) 319
Eco130I CCWWGG 2 cut(s) 98, 754
Eco24I GRGCYC 2 cut(s) 321, 912
Eco31I GGTCTC 1 cut(s) 994
Eco32I GATATC 1 cut(s) 114
Eco47I GGWCC 2 cut(s) 232, 703
Eco53kI GAGCTC 1 cut(s) 319
Eco57I CTGAAG 1 cut(s) 856
Eco88I CYCGRG 3 cut(s) 26, 392, 810
EcoICRI GAGCTC 1 cut(s) 319
EcoO109I RGGNCCY 2 cut(s) 703, 867
EcoRII CCWGG 3 cut(s) 234, 629, 643
EcoRV GATATC 1 cut(s) 114
EcoT14I CCWWGG 2 cut(s) 98, 754
EcoT22I ATGCAT 1 cut(s) 890
EcoT38I GRGCYC 2 cut(s) 321, 912
EgeI GGCGCC 1 cut(s) 738
EheI GGCGCC 1 cut(s) 738
ErhI CCWWGG 2 cut(s) 98, 754
FbaI TGATCA 1 cut(s) 118
FblI GTMKAC 1 cut(s) 1152
Fnu4HI GCNGC 3 cut(s) 76, 309, 341
FriOI GRGCYC 2 cut(s) 321, 912
Fsp4HI GCNGC 3 cut(s) 76, 309, 341
GlaI GCGC 1 cut(s) 738
GluI GCNGC 3 cut(s) 76, 309, 341
GsuI CTGGAG 1 cut(s) 1077
HaeII RGCGCY 1 cut(s) 740
HaeIII GGCC 1 cut(s) 869
HapII CCGG 1 cut(s) 840
HhaI GCGC 1 cut(s) 739
Hin1I GRCGYC 1 cut(s) 737
Hin6I GCGC 1 cut(s) 737
HinP1I GCGC 1 cut(s) 737
HincII GTYRAC 1 cut(s) 424
HindII GTYRAC 1 cut(s) 424
HinfI GANTC 8 cut(s) 203, 440, 521, 626, 750, 808, 968, 1034
HpaI GTTAAC 1 cut(s) 424
HpaII CCGG 1 cut(s) 840
HphI GGTGA 3 cut(s) 281, 290, 491
Hpy166II GTNNAC 4 cut(s) 424, 677, 975, 1153
Hpy188I TCNGA 4 cut(s) 118, 588, 875, 1106
Hpy188III TCNNGA 9 cut(s) 122, 473, 812, 946, 1027, 1040, 1056, 1121, 1192
Hpy8I GTNNAC 4 cut(s) 424, 677, 975, 1153
HpyAV CCTTC 4 cut(s) 590, 751, 880, 943
HpyCH4III ACNGT 4 cut(s) 335, 598, 681, 1065
HpyCH4IV ACGT 1 cut(s) 771
HpyCH4V TGCA 7 cut(s) 293, 407, 431, 671, 685, 712, 888
HpyF10VI GCNNNNNNNGC 1 cut(s) 743
HpyF3I CTNAG 4 cut(s) 156, 315, 534, 1171
HpySE526I ACGT 1 cut(s) 771
Hsp92I GRCGYC 1 cut(s) 737
HspAI GCGC 1 cut(s) 737
KasI GGCGCC 1 cut(s) 736
Ksp22I TGATCA 1 cut(s) 118
KspAI GTTAAC 1 cut(s) 424
Kzo9I GATC 4 cut(s) 118, 469, 1093, 1180
LguI GCTCTTC 1 cut(s) 900
Lsp1109I GCAGC 2 cut(s) 295, 352
LweI GCATC 3 cut(s) 280, 457, 694
MaeII ACGT 1 cut(s) 771
MaeIII GTNAC 4 cut(s) 278, 473, 659, 1065
MalI GATC 4 cut(s) 120, 471, 1095, 1182
MboI GATC 4 cut(s) 118, 469, 1093, 1180
MboII GAAGA 8 cut(s) 17, 195, 198, 355, 776, 917, 1100, 1103
MfeI CAATTG 1 cut(s) 851
MflI RGATCY 2 cut(s) 1093, 1180
MhlI GDGCHC 2 cut(s) 321, 912
MluCI AATT 7 cut(s) 384, 487, 493, 816, 833, 851, 1078
Mly113I GGCGCC 1 cut(s) 737
MlyI GAGTC 4 cut(s) 197, 759, 802, 977
MmeI TCCRAC 1 cut(s) 815
MnlI CCTC 7 cut(s) 185, 257, 401, 535, 957, 978, 1107
Mph1103I ATGCAT 1 cut(s) 890
MroXI GAANNNNTTC 1 cut(s) 579
MseI TTAA 3 cut(s) 50, 423, 612
MslI CAYNNNNRTG 4 cut(s) 261, 267, 372, 504
MspI CCGG 1 cut(s) 840
MspR9I CCNGG 3 cut(s) 236, 631, 645
MunI CAATTG 1 cut(s) 851
MvaI CCWGG 3 cut(s) 236, 631, 645
MwoI GCNNNNNNNGC 1 cut(s) 743
NarI GGCGCC 1 cut(s) 737
NcoI CCATGG 1 cut(s) 98
NdeII GATC 4 cut(s) 118, 469, 1093, 1180
NlaIV GGNNCC 3 cut(s) 704, 738, 868
NmuCI GTSAC 2 cut(s) 278, 473
NsiI ATGCAT 1 cut(s) 890
NspV TTCGAA 1 cut(s) 618
PaeR7I CTCGAG 2 cut(s) 392, 810
PagI TCATGA 4 cut(s) 121, 945, 1039, 1191
PciSI GCTCTTC 1 cut(s) 900
PcsI WCGNNNNNNNCGW 1 cut(s) 469
PdmI GAANNNNTTC 1 cut(s) 579
PfeI GAWTC 4 cut(s) 440, 521, 626, 1034
PkrI GCNGC 3 cut(s) 77, 310, 342
PleI GAGTC 4 cut(s) 197, 758, 802, 976
PluTI GGCGCC 1 cut(s) 740
PpsI GAGTC 4 cut(s) 197, 758, 802, 976
Ppu21I YACGTR 1 cut(s) 772
PpuMI RGGWCCY 1 cut(s) 703
PsiI TTATAA 1 cut(s) 492
Psp124BI GAGCTC 1 cut(s) 321
Psp5II RGGWCCY 1 cut(s) 703
Psp6I CCWGG 3 cut(s) 234, 629, 643
PspGI CCWGG 3 cut(s) 234, 629, 643
PspN4I GGNNCC 3 cut(s) 704, 738, 868
PspPI GGNCC 3 cut(s) 232, 703, 867
PspPPI RGGWCCY 1 cut(s) 703
PspXI VCTCGAGB 1 cut(s) 392
PsuI RGATCY 2 cut(s) 1093, 1180
RsaI GTAC 3 cut(s) 539, 567, 1076
RsaNI GTAC 3 cut(s) 538, 566, 1075
RseI CAYNNNNRTG 4 cut(s) 261, 267, 372, 504
SacI GAGCTC 1 cut(s) 321
SapI GCTCTTC 1 cut(s) 900
SaqAI TTAA 3 cut(s) 50, 423, 612
SatI GCNGC 3 cut(s) 76, 309, 341
Sau3AI GATC 4 cut(s) 118, 469, 1093, 1180
Sau96I GGNCC 3 cut(s) 232, 703, 867
SchI GAGTC 4 cut(s) 197, 759, 802, 977
ScrFI CCNGG 3 cut(s) 236, 631, 645
SduI GDGCHC 2 cut(s) 321, 912
SetI ASST 9 cut(s) 21, 237, 310, 321, 504, 571, 582, 625, 774
SfaNI GCATC 3 cut(s) 280, 457, 694
SfoI GGCGCC 1 cut(s) 738
Sfr274I CTCGAG 2 cut(s) 392, 810
SfuI TTCGAA 1 cut(s) 618
SinI GGWCC 2 cut(s) 232, 703
SlaI CTCGAG 2 cut(s) 392, 810
SmiMI CAYNNNNRTG 4 cut(s) 261, 267, 372, 504
SmlI CTYRAG 2 cut(s) 392, 810
SmoI CTYRAG 2 cut(s) 392, 810
Sse9I AATT 7 cut(s) 384, 487, 493, 816, 833, 851, 1078
SsiI CCGC 3 cut(s) 76, 207, 827
SspDI GGCGCC 1 cut(s) 736
SstI GAGCTC 1 cut(s) 321
StyD4I CCNGG 3 cut(s) 234, 629, 643
StyI CCWWGG 2 cut(s) 98, 754
TaaI ACNGT 4 cut(s) 335, 598, 681, 1065
TaiI ACGT 1 cut(s) 774
TaqI TCGA 6 cut(s) 321, 352, 393, 618, 688, 811
TasI AATT 7 cut(s) 384, 487, 493, 816, 833, 851, 1078
TatI WGTACW 1 cut(s) 1074
TauI GCSGC 1 cut(s) 78
TfiI GAWTC 4 cut(s) 440, 521, 626, 1034
Tru1I TTAA 3 cut(s) 50, 423, 612
Tru9I TTAA 3 cut(s) 50, 423, 612
TscAI CASTG 1 cut(s) 160
TseFI GTSAC 2 cut(s) 278, 473
TseI GCWGC 2 cut(s) 308, 340
Tsp45I GTSAC 2 cut(s) 278, 473
TspDTI ATGAA 6 cut(s) 312, 572, 588, 777, 962, 1101
TspRI CASTG 1 cut(s) 160
VpaK11BI GGWCC 2 cut(s) 232, 703
XapI RAATTY 1 cut(s) 816
XcmI CCANNNNNNNNNTGG 1 cut(s) 374
XhoI CTCGAG 2 cut(s) 392, 810
XmiI GTMKAC 1 cut(s) 1152
XmnI GAANNNNTTC 1 cut(s) 579
Zsp2I ATGCAT 1 cut(s) 890
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.