RLG00000020474

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000111
Physical Location & Seq
Forward (+)
65437626 .. 65438882
1257 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000020474

Sequence Viewer

Length: 1257 bp
ATGGGAAACCCTAACCCTAGCGATCTTCCATCCGAGATTATACACGAGATTCTATCATGGCTACCAGTGAAATCGCTATGCCGCTTCAGGTGTGTGTCGAAGCCTTGGCGCTCCTTAATTTCTGATCCGAGATTTGTCAAACTGCATCTTAACAAAAGCAATGAGAATGAGCATGTGTTCCGCCAAAGACAAAGAGTCATATTGACGACCCCCGTAGAAGCGTCCCAATCAAAAAAAAACCGAGACTATGTATGCTGTTTGAATCTCAATGAGCTTCTCAGTCTTGATGATCAAGATGATCATGATTTAGTACCCACTGAGCTCAATTCTGTTTTTAGTGAACTGGGAGAGATTAATGTTGAAGGGATGTTTCACTGCAATGGCTTGTTGTTTTTCCGATTACGTGGAAAAAGTTATTTGGTTAACCCCGCAACCAGGGAATCCAAGAAACTTCCTAGGCCACCAAGACTGCAAGGGGAGTACGACCCTTTTCCAAATAACTTGTATGGGTTTGGATTTGATTACTCCATTAATGATTACAAGGTGGTCAATGGGCAGATCTGTTGGCAGAATGGTGATCTTGTAGTTCAATTTACTGTCTATACATTGAAAGACGGTTCATGGCGAGTGATTGAGAGGCAATTTCCCTACCGTATACCTGAATATTCTCATGATCGGTCTACAAATTTCAATGGGATTTTGCTGAATGGAGGTCTTCATTGGTTGATGTATAAAGTCGGAGGTGAGTCATTACTCATCGTATGTTTCCTTTTGGAAGAGGAGAAGGTCCGAGAGATTCAACTGCCAGTTGGGTGTTTCTATTCCAGTGACAATCCGTTGGTGCAATTAGGGGTTTTTAGAGAAGATAAGCTATTTATAACAACAGTTCGTGACAATAGAGGATATTCTTATAGTGGGATTTTGGTTATGATGGAATATGGAGTGAGGGAGTCTTGGACTAAAGCAACAGTGGTGGTGCCATATTGCCACTCATTACGTTTTTGTTTTTGGAGGAAATCTCATGATTTAGTGGTGAGTGATGGAGATTTATTATTGTACGAGTTTAAAAAAGAAGACTTGTTGGAGCTATCAATTCGTGGAATTACTGAAGTTAGCTTCGTTGAGATCTATTTCGAAAACCTTGTTTCGCTTGTTGATCGGAAGCCAATCCTTCAAGAGCATACTCCTCATCATGAGCCTAATTTAAATCTTTCAACTTCGTTGATTCCAAACAAACGGAGAAGATCGTGTTCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

419

Amino Acids

48.61

Weight (kDa)

6.47

Isoelectric Point (pI)

38.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 7 - 46 2e-13 F-box domain
F-box-like PF12937 7 - 44 1.2e-10 F-box-like
FBA_1 PF07734 106 - 336 1.4e-22 F-box associated beta propeller domain
FBA_3 PF08268 123 - 328 1.4e-15 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000111)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G06240
fragaria_vesca FvH4_1g04511 FvH4_1g04521 FvH4_1g05182 FvH4_1g05210 FvH4_1g05230 FvH4_1g05231 FvH4_1g05232 FvH4_1g05391 FvH4_1g05420 FvH4_2g41451 FvH4_3g15810 FvH4_3g15810 FvH4_3g18161 FvH4_3g19801 FvH4_3g39980 FvH4_3g39980 FvH4_3g39980 FvH4_3g39990 FvH4_3g40020 FvH4_3g40020 FvH4_3g40031 FvH4_3g40040 FvH4_4g32891 FvH4_5g33121 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g38210 FvH4_5g38211 FvH4_5g39231 FvH4_6g16940 FvH4_6g33181 FvH4_7g09411 FvH4_7g23271 FvH4_7g26741 FvH4_7g28012 FvH4_7g28013 FvH4_7g28031 FvH4_7g28041
malus_domestica MD03G1104200.v1.1 MD03G1139900.v1.1 MD03G1192800.v1.1 MD10G1202200.v1.1 MD11G1131100.v1.1 MD11G1202700.v1.1 MD11G1203000.v1.1
prunus_persica Prupe.2G163500_v2.0.a1 Prupe.4G140000_v2.0.a1 Prupe.4G140100_v2.0.a1 Prupe.4G222200_v2.0.a1 Prupe.4G236200_v2.0.a1 Prupe.4G236300_v2.0.a1 Prupe.4G236400_v2.0.a1 Prupe.4G237500_v2.0.a1 Prupe.6G125500_v2.0.a1
pyrus_communis pycom03g14510 pycom05g20120 pycom11g10840 pycom11g17520 pycom11g17590 pycom15g03310
rosa_chinensis RchiOBHm_Chr0c44g0503541 RchiOBHm_Chr2g0090931 RchiOBHm_Chr2g0090941 RchiOBHm_Chr2g0090951 RchiOBHm_Chr2g0090961 RchiOBHm_Chr2g0092791 RchiOBHm_Chr2g0099041 RchiOBHm_Chr2g0169971 RchiOBHm_Chr2g0170021 RchiOBHm_Chr4g0386131 RchiOBHm_Chr4g0386141 RchiOBHm_Chr4g0386161 RchiOBHm_Chr4g0386281 RchiOBHm_Chr4g0386291 RchiOBHm_Chr4g0440811 RchiOBHm_Chr5g0026601 RchiOBHm_Chr5g0026621 RchiOBHm_Chr5g0026871 RchiOBHm_Chr5g0072021 RchiOBHm_Chr5g0072031 RchiOBHm_Chr5g0072171 RchiOBHm_Chr5g0072181 RchiOBHm_Chr7g0231281 RchiOBHm_Chr7g0231301 RchiOBHm_Chr7g0240141
rosa_laevigata RLG00000000695 RLG00000001421 RLG00000004300 RLG00000006148 RLG00000006151 RLG00000016157 RLG00000016158 RLG00000016159 RLG00000016160 RLG00000016161 RLG00000020474 RLG00000021915 RLG00000029159 RLG00000032939 RLG00000032940 RLG00000032966 RLG00000036270 RLG00000036272 RLG00000036280 RLG00000036284
rosa_multiflora Rmu_co8434269.1_g000001 Rmu_sc0000792.1_g000017 Rmu_sc0000792.1_g000018 Rmu_sc0000792.1_g000019 Rmu_sc0001132.1_g000008 Rmu_sc0001152.1_g000004 Rmu_sc0001152.1_g000033 Rmu_sc0001583.1_g000004 Rmu_sc0003305.1_g000001 Rmu_sc0003333.1_g000005 Rmu_sc0003396.1_g000010 Rmu_sc0003396.1_g000011 Rmu_sc0003396.1_g000017 Rmu_sc0004571.1_g000004 Rmu_sc0004851.1_g000003 Rmu_sc0004851.1_g000004 Rmu_sc0005008.1_g000015 Rmu_sc0006854.1_g000016 Rmu_sc0006854.1_g000023 Rmu_sc0009422.1_g000009 Rmu_sc0010610.1_g000003 Rmu_sc0018952.1_g000008 Rmu_sc0037136.1_g000001 Rmu_ssc0000172.1_g000016 Rmu_ssc0000389.1_g000005
rosa_roxburghii Rroxscaffold_1G00009050 Rroxscaffold_1G00009090 Rroxscaffold_1G00009130 Rroxscaffold_1G00009230 Rroxscaffold_1G00044650 Rroxscaffold_1G00052600 Rroxscaffold_1G00052610 Rroxscaffold_1G00052860 Rroxscaffold_1G00052880 Rroxscaffold_2G00081700 Rroxscaffold_2G00148820 Rroxscaffold_2G00150560 Rroxscaffold_2G00150570 Rroxscaffold_2G00150590 Rroxscaffold_2G00150600 Rroxscaffold_2G00150630 Rroxscaffold_2G00150730 Rroxscaffold_2G00150740 Rroxscaffold_3G00229360 Rroxscaffold_3G00262430 Rroxscaffold_4G00313090 Rroxscaffold_5G00381610
rosa_rugosa Rorug01G0285600 Rorug02G0011200 Rorug02G0011300 Rorug02G0011400 Rorug02G0012500 Rorug02G0012600 Rorug02G0012700 Rorug02G0029300 Rorug02G0075800 Rorug02G0075900 Rorug02G0419600 Rorug02G0544800 Rorug04G0112200 Rorug05G0094100 Rorug05G0094100 Rorug05G0094200 Rorug05G0415900 Rorug05G0415900 Rorug05G0416000 Rorug05G0416100 Rorug05G0416200 Rorug05G0416300 Rorug05G0416700 Rorug05G0416800 Rorug07G0265700 Rorug07G0265800 Rorug07G0265900 Rorug07G0266000 Rorug07G0266100
rosa_samantha Rh2AG057300 Rh2AG057400 Rh2AG058700 Rh2AG478800 Rh2AG616800 Rh2DG056700 Rh2DG056800 Rh2DG056900 Rh2DG073500 Rh2DG129700 Rh2DG639800 Rh4AG380100 Rh4DG386700 Rh5AG187500 Rh5AG187700 Rh5AG189200 Rh5AG472100 Rh5AG472800 Rh5BG184000 Rh5BG184200 Rh5BG185800 Rh5BG186500 Rh5CG204000 Rh5CG205800 Rh5DG186300 Rh5DG186500 Rh5DG188100 Rh5DG503500 Rh5DG503700 Rh5DG504000 Rh5DG504100 Rh5DG504700 Rh5DG504900 Rh5DG505000 Rh7AG419500 Rh7AG419800 Rh7CG439300 Rh7DG413100
rosa_wichuraiana Rw0G002880 Rw1G026240 Rw2G005200 Rw2G005210 Rw2G005820 Rw2G009640 Rw5G016980 Rw5G017000 Rw5G017190 Rw5G043880 Rw7G011300 Rw7G034680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 878
AccB1I GGYRCC 1 cut(s) 976
AccI GTMKAC 2 cut(s) 655, 680
AciI CCGC 3 cut(s) 82, 181, 429
AclWI GGATC 1 cut(s) 119
AcsI RAATTY 1 cut(s) 685
AcuI CTGAAG 2 cut(s) 70, 1128
AfaI GTAC 3 cut(s) 312, 482, 1058
AfiI CCNNNNNNNGG 1 cut(s) 435
AgsI TTSAA 8 cut(s) 262, 362, 590, 610, 691, 800, 1175, 1215
AhdI GACNNNNNGTC 1 cut(s) 194
AjnI CCWGG 1 cut(s) 434
AluBI AGCT 5 cut(s) 274, 322, 871, 1087, 1116
AluI AGCT 5 cut(s) 274, 322, 871, 1087, 1116
Alw21I GWGCWC 1 cut(s) 324
Alw26I GTCTC 1 cut(s) 237
AlwI GGATC 1 cut(s) 119
AoxI GGCC 1 cut(s) 458
ApoI RAATTY 1 cut(s) 685
AseI ATTAAT 2 cut(s) 354, 531
AspA2I CCTAGG 1 cut(s) 455
AspLEI GCGC 1 cut(s) 111
AspS9I GGNCC 1 cut(s) 787
AsuHPI GGTGA 3 cut(s) 587, 755, 1045
AsuII TTCGAA 1 cut(s) 1134
AvaII GGWCC 1 cut(s) 787
AvrII CCTAGG 1 cut(s) 455
BanI GGYRCC 1 cut(s) 976
BanII GRGCYC 1 cut(s) 324
BauI CACGAG 1 cut(s) 44
BbsI GAAGAC 2 cut(s) 707, 1080
Bbv12I GWGCWC 1 cut(s) 324
BccI CCATC 3 cut(s) 37, 925, 1034
BciT130I CCWGG 1 cut(s) 436
BclI TGATCA 2 cut(s) 289, 298
BcoDI GTCTC 1 cut(s) 237
BfaI CTAG 2 cut(s) 18, 456
BfoI RGCGCY 1 cut(s) 112
BglII AGATCT 2 cut(s) 558, 1125
BisI GCNGC 1 cut(s) 82
BlnI CCTAGG 1 cut(s) 455
BlsI GCNGC 1 cut(s) 83
Bme1390I CCNGG 1 cut(s) 436
Bme18I GGWCC 1 cut(s) 787
BmeRI GACNNNNNGTC 1 cut(s) 194
BmgT120I GGNCC 1 cut(s) 787
BmiI GGNNCC 1 cut(s) 978
BmrFI CCNGG 1 cut(s) 436
BmrI ACTGGG 1 cut(s) 353
BmsI GCATC 1 cut(s) 154
BmuI ACTGGG 1 cut(s) 353
BpiI GAAGAC 2 cut(s) 707, 1080
BplI GAGNNNNNCTC 2 cut(s) 1003, 1035
Bpu14I TTCGAA 1 cut(s) 1134
BsaAI YACGTR 1 cut(s) 404
BsaJI CCNNGG 3 cut(s) 104, 435, 455
Bsc4I CCNNNNNNNGG 1 cut(s) 435
Bse1I ACTGG 4 cut(s) 65, 348, 806, 825
Bse3DI GCAATG 2 cut(s) 166, 385
BseBI CCWGG 1 cut(s) 436
BseDI CCNNGG 3 cut(s) 104, 435, 455
BseGI GGATG 2 cut(s) 29, 372
BseLI CCNNNNNNNGG 1 cut(s) 435
BseMI GCAATG 2 cut(s) 166, 385
BseMII CTCAG 2 cut(s) 292, 309
BseNI ACTGG 4 cut(s) 65, 348, 806, 825
BseRI GAGGAG 2 cut(s) 794, 1176
BshFI GGCC 1 cut(s) 460
BshNI GGYRCC 1 cut(s) 976
BsiHKAI GWGCWC 1 cut(s) 324
BslFI GGGAC 1 cut(s) 208
BslI CCNNNNNNNGG 1 cut(s) 435
BsmAI GTCTC 1 cut(s) 237
BsmFI GGGAC 1 cut(s) 208
BsnI GGCC 1 cut(s) 460
Bsp119I TTCGAA 1 cut(s) 1134
Bsp1286I GDGCHC 1 cut(s) 324
BspACI CCGC 3 cut(s) 82, 181, 429
BspANI GGCC 1 cut(s) 460
BspCNI CTCAG 2 cut(s) 291, 310
BspHI TCATGA 4 cut(s) 301, 670, 1021, 1192
BspLI GGNNCC 1 cut(s) 978
BspPI GGATC 1 cut(s) 119
BspT104I TTCGAA 1 cut(s) 1134
BspT107I GGYRCC 1 cut(s) 976
BsrDI GCAATG 2 cut(s) 166, 385
BsrI ACTGG 4 cut(s) 65, 348, 806, 825
BssECI CCNNGG 3 cut(s) 104, 435, 455
BssNAI GTATAC 1 cut(s) 656
BssSI CACGAG 1 cut(s) 44
BssT1I CCWWGG 2 cut(s) 104, 455
Bst1107I GTATAC 1 cut(s) 656
Bst2BI CACGAG 1 cut(s) 44
Bst2UI CCWGG 1 cut(s) 436
Bst4CI ACNGT 5 cut(s) 598, 617, 653, 886, 970
Bst6I CTCTTC 1 cut(s) 771
BstBAI YACGTR 1 cut(s) 404
BstBI TTCGAA 1 cut(s) 1134
BstDEI CTNAG 2 cut(s) 278, 318
BstF5I GGATG 2 cut(s) 29, 372
BstH2I RGCGCY 1 cut(s) 112
BstHHI GCGC 1 cut(s) 111
BstMAI GTCTC 1 cut(s) 237
BstNI CCWGG 1 cut(s) 436
BstNSI RCATGY 1 cut(s) 176
BstSCI CCNGG 1 cut(s) 434
BstV2I GAAGAC 2 cut(s) 707, 1080
BstX2I RGATCY 2 cut(s) 558, 1125
BstYI RGATCY 2 cut(s) 558, 1125
BstZ17I GTATAC 1 cut(s) 656
BsuRI GGCC 1 cut(s) 460
BtsCI GGATG 2 cut(s) 29, 372
BtsI GCAGTG 1 cut(s) 373
BtsIMutI CAGTG 5 cut(s) 72, 315, 373, 832, 975
CciI TCATGA 4 cut(s) 301, 670, 1021, 1192
CfoI GCGC 1 cut(s) 111
Cfr13I GGNCC 1 cut(s) 787
CseI GACGC 1 cut(s) 210
Csp6I GTAC 3 cut(s) 311, 481, 1057
CspCI CAANNNNNGTGG 2 cut(s) 954, 989
CviAII CATG 7 cut(s) 57, 173, 302, 621, 671, 1022, 1193
CviQI GTAC 3 cut(s) 311, 481, 1057
DdeI CTNAG 2 cut(s) 278, 318
DraI TTTAAA 2 cut(s) 1066, 1206
DriI GACNNNNNGTC 1 cut(s) 194
Eam1104I CTCTTC 1 cut(s) 771
Eam1105I GACNNNNNGTC 1 cut(s) 194
EarI CTCTTC 1 cut(s) 771
EciI GGCGGA 1 cut(s) 170
Ecl136II GAGCTC 1 cut(s) 322
Eco130I CCWWGG 2 cut(s) 104, 455
Eco24I GRGCYC 1 cut(s) 324
Eco47I GGWCC 1 cut(s) 787
Eco53kI GAGCTC 1 cut(s) 322
Eco57I CTGAAG 2 cut(s) 70, 1128
EcoICRI GAGCTC 1 cut(s) 322
EcoRII CCWGG 1 cut(s) 434
EcoT14I CCWWGG 2 cut(s) 104, 455
EcoT38I GRGCYC 1 cut(s) 324
ErhI CCWWGG 2 cut(s) 104, 455
FaeI CATG 7 cut(s) 60, 176, 305, 624, 674, 1025, 1196
FaqI GGGAC 1 cut(s) 208
FatI CATG 7 cut(s) 56, 172, 301, 620, 670, 1021, 1192
FauI CCCGC 1 cut(s) 436
FbaI TGATCA 2 cut(s) 289, 298
FblI GTMKAC 2 cut(s) 655, 680
Fnu4HI GCNGC 1 cut(s) 82
FokI GGATG 2 cut(s) 16, 379
FriOI GRGCYC 1 cut(s) 324
Fsp4HI GCNGC 1 cut(s) 82
FspBI CTAG 2 cut(s) 18, 456
GlaI GCGC 1 cut(s) 110
GluI GCNGC 1 cut(s) 82
HaeII RGCGCY 1 cut(s) 112
HaeIII GGCC 1 cut(s) 460
HgaI GACGC 1 cut(s) 210
HhaI GCGC 1 cut(s) 111
Hin1II CATG 7 cut(s) 60, 176, 305, 624, 674, 1025, 1196
Hin6I GCGC 1 cut(s) 109
HinP1I GCGC 1 cut(s) 109
HincII GTYRAC 1 cut(s) 424
HindII GTYRAC 1 cut(s) 424
HinfI GANTC 8 cut(s) 49, 195, 262, 440, 746, 796, 950, 1225
HpaI GTTAAC 1 cut(s) 424
HphI GGTGA 3 cut(s) 587, 755, 1045
Hpy166II GTNNAC 4 cut(s) 341, 424, 656, 681
Hpy188I TCNGA 7 cut(s) 34, 124, 129, 398, 740, 791, 1161
Hpy188III TCNNGA 9 cut(s) 284, 293, 302, 671, 890, 1022, 1175, 1193, 1254
Hpy8I GTNNAC 4 cut(s) 341, 424, 656, 681
HpyAV CCTTC 3 cut(s) 356, 778, 1181
HpyCH4III ACNGT 5 cut(s) 598, 617, 653, 886, 970
HpyCH4IV ACGT 2 cut(s) 403, 997
HpyCH4V TGCA 4 cut(s) 145, 378, 472, 844
HpyF3I CTNAG 2 cut(s) 278, 318
HpySE526I ACGT 2 cut(s) 403, 997
Hsp92II CATG 7 cut(s) 60, 176, 305, 624, 674, 1025, 1196
HspAI GCGC 1 cut(s) 109
Ksp22I TGATCA 2 cut(s) 289, 298
KspAI GTTAAC 1 cut(s) 424
LmnI GCTCC 2 cut(s) 116, 1084
LpnPI CCDG 8 cut(s) 73, 78, 329, 421, 448, 672, 819, 838
LweI GCATC 1 cut(s) 154
MaeI CTAG 2 cut(s) 18, 456
MaeII ACGT 2 cut(s) 403, 997
MaeIII GTNAC 2 cut(s) 827, 890
MboII GAAGA 6 cut(s) 17, 707, 788, 875, 1085, 1254
MflI RGATCY 2 cut(s) 558, 1125
MhlI GDGCHC 1 cut(s) 324
MluCI AATT 9 cut(s) 117, 325, 590, 641, 685, 845, 1092, 1101, 1201
MlyI GAGTC 3 cut(s) 204, 755, 959
MmeI TCCRAC 2 cut(s) 718, 1062
MnlI CCTC 8 cut(s) 630, 704, 734, 772, 893, 939, 1005, 1197
MseI TTAA 7 cut(s) 116, 150, 354, 423, 531, 1065, 1205
MslI CAYNNNNRTG 1 cut(s) 378
MspR9I CCNGG 1 cut(s) 436
MvaI CCWGG 1 cut(s) 436
NlaIII CATG 7 cut(s) 60, 176, 305, 624, 674, 1025, 1196
NlaIV GGNNCC 1 cut(s) 978
NmuCI GTSAC 2 cut(s) 827, 890
NspI RCATGY 1 cut(s) 176
NspV TTCGAA 1 cut(s) 1134
PagI TCATGA 4 cut(s) 301, 670, 1021, 1192
PfeI GAWTC 5 cut(s) 49, 262, 440, 796, 1225
PkrI GCNGC 1 cut(s) 83
PleI GAGTC 3 cut(s) 203, 754, 958
PpsI GAGTC 3 cut(s) 203, 754, 958
Ppu21I YACGTR 1 cut(s) 404
PshBI ATTAAT 2 cut(s) 354, 531
PsiI TTATAA 1 cut(s) 878
Psp124BI GAGCTC 1 cut(s) 324
Psp6I CCWGG 1 cut(s) 434
PspGI CCWGG 1 cut(s) 434
PspN4I GGNNCC 1 cut(s) 978
PspPI GGNCC 1 cut(s) 787
PsuI RGATCY 2 cut(s) 558, 1125
RsaI GTAC 3 cut(s) 312, 482, 1058
RsaNI GTAC 3 cut(s) 311, 481, 1057
RseI CAYNNNNRTG 1 cut(s) 378
SacI GAGCTC 1 cut(s) 324
SaqAI TTAA 7 cut(s) 116, 150, 354, 423, 531, 1065, 1205
SatI GCNGC 1 cut(s) 82
Sau96I GGNCC 1 cut(s) 787
SchI GAGTC 3 cut(s) 204, 755, 959
ScrFI CCNGG 1 cut(s) 436
SduI GDGCHC 1 cut(s) 324
SfaNI GCATC 1 cut(s) 154
SfuI TTCGAA 1 cut(s) 1134
SinI GGWCC 1 cut(s) 787
SmiI ATTTAAAT 1 cut(s) 1206
SmiMI CAYNNNNRTG 1 cut(s) 378
Sse9I AATT 9 cut(s) 117, 325, 590, 641, 685, 845, 1092, 1101, 1201
SsiI CCGC 3 cut(s) 82, 181, 429
SspI AATATT 1 cut(s) 665
SspMI CTAG 2 cut(s) 18, 456
SstI GAGCTC 1 cut(s) 324
StyD4I CCNGG 1 cut(s) 434
StyI CCWWGG 2 cut(s) 104, 455
SwaI ATTTAAAT 1 cut(s) 1206
TaaI ACNGT 5 cut(s) 598, 617, 653, 886, 970
TaiI ACGT 2 cut(s) 406, 1000
TaqI TCGA 2 cut(s) 98, 1134
TaqII GACCGA 1 cut(s) 666
TasI AATT 9 cut(s) 117, 325, 590, 641, 685, 845, 1092, 1101, 1201
TauI GCSGC 1 cut(s) 84
TfiI GAWTC 5 cut(s) 49, 262, 440, 796, 1225
Tru1I TTAA 7 cut(s) 116, 150, 354, 423, 531, 1065, 1205
Tru9I TTAA 7 cut(s) 116, 150, 354, 423, 531, 1065, 1205
TscAI CASTG 5 cut(s) 72, 322, 380, 832, 975
TseFI GTSAC 2 cut(s) 827, 890
Tsp45I GTSAC 2 cut(s) 827, 890
TspDTI ATGAA 2 cut(s) 609, 707
TspGWI ACGGA 2 cut(s) 825, 1252
TspRI CASTG 5 cut(s) 72, 322, 380, 832, 975
VpaK11BI GGWCC 1 cut(s) 787
VspI ATTAAT 2 cut(s) 354, 531
XapI RAATTY 1 cut(s) 685
XceI RCATGY 1 cut(s) 176
XmaJI CCTAGG 1 cut(s) 455
XmiI GTMKAC 2 cut(s) 655, 680
XspI CTAG 2 cut(s) 18, 456
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.