Rorug02G0012700

Belongs to the glycosyl hydrolase 17 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000111
Physical Location & Seq
Reverse (-)
1090821 .. 1092884
2064 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0012700.1

Sequence Viewer

Length: 1152 bp
ATGAAGAGGATTCTGAAGTCATCTGTGTCAAGTGCCTCAGCTGGTGTCTCTTTCAAAGCAGCAGCCATGGTGGCAGCTGCAATATTACCCGAAGAGATGATAGTGCAAATCGTGACCAGGCTACCGGTCAAATCTGTGGGGCGATGCAGATGCGTCTGTAAACGGTGGCGCACTCTATTCTCTGATCCCCAATTCGCGAAATTGCACTTCCAATGTGCCCCTAAGCATCAAACCCTACTACTCTCCCGCAACTTTAAACTTGAAATCCTAAATTTGAGTTATAGGCTGTCGTTTGGGAAGGAGTCTCTAGTTCTCCAAAATCTGAATGCTCCTTTCGATCACACGTGGGCTGTCTTTATAGGCTCCTGCAATGGGCTGGTAGCATCATATCTCTCCCGTTCCTTCCTGCAACAGGAAAGCCTGTTTATATGGAACCCGTCCACCAGATTCTTTAAGAAATTACCCAGCCGAGGTAATACTTCTCAGATATCCATTTTTGGGTTTGGCTATGTGTCTGCCACCGACGAATACAAAGCTGTGATAAATGCGGAGATCTTCTCATCCAAGACTGAATCATGGAAACGGATTGAAATCCCTCGCTTCCGCATCGCGTCATCATGTGGTGTGCTTTTTGGTGAGGCACTCCATTGGCTATTCTATCCCGATGTTGAAAGGCAACAGGTTCCAAATCTGTATGCTTTCGATTTGGAGGAGGAGGAGTTTTCAGTAATGAAGCTGCCTTGTGCTTTTCAAACACTAGGGCTTAAAAACTGTTTTATATGCCAGGTTGGTGTTTCTTGTGAAGGGTGCTTGTATGTAATGGTCAATAATCCGCGGTGGCATTGTGGTAAGTTGGCCTATTATGAAATTGACTTTTGGGTCATGAGAGAGTATGGCAACAGTGATTCCTGGACTAGATCGTTCGGCGTAAGGATTCCCGGTCAGCCTGAGCGGAGGGACTGGTATCTTCATCTTCAAGCAATTTCGGTTAGGGAAGCTAGTGCATTTGTGAGGAATAGATGTCCAAGGGAAGAAGAGAAGCTCGACATGTCTATAATTCATTATCGTAATGAAGAAGAGAACTCCGACATGTATATGCTTGACAATGATGCACATGACATGGCTGTATATGAAGAGAGTCTGTTGTCTTAA

Protein Analysis

383

Amino Acids

44.13

Weight (kDa)

8.16

Isoelectric Point (pI)

50.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 28 - 65 2.4e-10 F-box-like
F-box PF00646 29 - 65 2.5e-10 F-box domain
FBA_3 PF08268 100 - 312 1.5e-10 F-box associated beta propeller domain
FBA_1 PF07734 117 - 339 1.1e-17 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000111)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G06240
fragaria_vesca FvH4_1g04511 FvH4_1g04521 FvH4_1g05182 FvH4_1g05210 FvH4_1g05230 FvH4_1g05231 FvH4_1g05232 FvH4_1g05391 FvH4_1g05420 FvH4_2g41451 FvH4_3g15810 FvH4_3g15810 FvH4_3g18161 FvH4_3g19801 FvH4_3g39980 FvH4_3g39980 FvH4_3g39980 FvH4_3g39990 FvH4_3g40020 FvH4_3g40020 FvH4_3g40031 FvH4_3g40040 FvH4_4g32891 FvH4_5g33121 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g38210 FvH4_5g38211 FvH4_5g39231 FvH4_6g16940 FvH4_6g33181 FvH4_7g09411 FvH4_7g23271 FvH4_7g26741 FvH4_7g28012 FvH4_7g28013 FvH4_7g28031 FvH4_7g28041
malus_domestica MD03G1104200.v1.1 MD03G1139900.v1.1 MD03G1192800.v1.1 MD10G1202200.v1.1 MD11G1131100.v1.1 MD11G1202700.v1.1 MD11G1203000.v1.1
prunus_persica Prupe.2G163500_v2.0.a1 Prupe.4G140000_v2.0.a1 Prupe.4G140100_v2.0.a1 Prupe.4G222200_v2.0.a1 Prupe.4G236200_v2.0.a1 Prupe.4G236300_v2.0.a1 Prupe.4G236400_v2.0.a1 Prupe.4G237500_v2.0.a1 Prupe.6G125500_v2.0.a1
pyrus_communis pycom03g14510 pycom05g20120 pycom11g10840 pycom11g17520 pycom11g17590 pycom15g03310
rosa_chinensis RchiOBHm_Chr0c44g0503541 RchiOBHm_Chr2g0090931 RchiOBHm_Chr2g0090941 RchiOBHm_Chr2g0090951 RchiOBHm_Chr2g0090961 RchiOBHm_Chr2g0092791 RchiOBHm_Chr2g0099041 RchiOBHm_Chr2g0169971 RchiOBHm_Chr2g0170021 RchiOBHm_Chr4g0386131 RchiOBHm_Chr4g0386141 RchiOBHm_Chr4g0386161 RchiOBHm_Chr4g0386281 RchiOBHm_Chr4g0386291 RchiOBHm_Chr4g0440811 RchiOBHm_Chr5g0026601 RchiOBHm_Chr5g0026621 RchiOBHm_Chr5g0026871 RchiOBHm_Chr5g0072021 RchiOBHm_Chr5g0072031 RchiOBHm_Chr5g0072171 RchiOBHm_Chr5g0072181 RchiOBHm_Chr7g0231281 RchiOBHm_Chr7g0231301 RchiOBHm_Chr7g0240141
rosa_laevigata RLG00000000695 RLG00000001421 RLG00000004300 RLG00000006148 RLG00000006151 RLG00000016157 RLG00000016158 RLG00000016159 RLG00000016160 RLG00000016161 RLG00000020474 RLG00000021915 RLG00000029159 RLG00000032939 RLG00000032940 RLG00000032966 RLG00000036270 RLG00000036272 RLG00000036280 RLG00000036284
rosa_multiflora Rmu_co8434269.1_g000001 Rmu_sc0000792.1_g000017 Rmu_sc0000792.1_g000018 Rmu_sc0000792.1_g000019 Rmu_sc0001132.1_g000008 Rmu_sc0001152.1_g000004 Rmu_sc0001152.1_g000033 Rmu_sc0001583.1_g000004 Rmu_sc0003305.1_g000001 Rmu_sc0003333.1_g000005 Rmu_sc0003396.1_g000010 Rmu_sc0003396.1_g000011 Rmu_sc0003396.1_g000017 Rmu_sc0004571.1_g000004 Rmu_sc0004851.1_g000003 Rmu_sc0004851.1_g000004 Rmu_sc0005008.1_g000015 Rmu_sc0006854.1_g000016 Rmu_sc0006854.1_g000023 Rmu_sc0009422.1_g000009 Rmu_sc0010610.1_g000003 Rmu_sc0018952.1_g000008 Rmu_sc0037136.1_g000001 Rmu_ssc0000172.1_g000016 Rmu_ssc0000389.1_g000005
rosa_roxburghii Rroxscaffold_1G00009050 Rroxscaffold_1G00009090 Rroxscaffold_1G00009130 Rroxscaffold_1G00009230 Rroxscaffold_1G00044650 Rroxscaffold_1G00052600 Rroxscaffold_1G00052610 Rroxscaffold_1G00052860 Rroxscaffold_1G00052880 Rroxscaffold_2G00081700 Rroxscaffold_2G00148820 Rroxscaffold_2G00150560 Rroxscaffold_2G00150570 Rroxscaffold_2G00150590 Rroxscaffold_2G00150600 Rroxscaffold_2G00150630 Rroxscaffold_2G00150730 Rroxscaffold_2G00150740 Rroxscaffold_3G00229360 Rroxscaffold_3G00262430 Rroxscaffold_4G00313090 Rroxscaffold_5G00381610
rosa_rugosa Rorug01G0285600 Rorug02G0011200 Rorug02G0011300 Rorug02G0011400 Rorug02G0012500 Rorug02G0012600 Rorug02G0012700 Rorug02G0029300 Rorug02G0075800 Rorug02G0075900 Rorug02G0419600 Rorug02G0544800 Rorug04G0112200 Rorug05G0094100 Rorug05G0094100 Rorug05G0094200 Rorug05G0415900 Rorug05G0415900 Rorug05G0416000 Rorug05G0416100 Rorug05G0416200 Rorug05G0416300 Rorug05G0416700 Rorug05G0416800 Rorug07G0265700 Rorug07G0265800 Rorug07G0265900 Rorug07G0266000 Rorug07G0266100
rosa_samantha Rh2AG057300 Rh2AG057400 Rh2AG058700 Rh2AG478800 Rh2AG616800 Rh2DG056700 Rh2DG056800 Rh2DG056900 Rh2DG073500 Rh2DG129700 Rh2DG639800 Rh4AG380100 Rh4DG386700 Rh5AG187500 Rh5AG187700 Rh5AG189200 Rh5AG472100 Rh5AG472800 Rh5BG184000 Rh5BG184200 Rh5BG185800 Rh5BG186500 Rh5CG204000 Rh5CG205800 Rh5DG186300 Rh5DG186500 Rh5DG188100 Rh5DG503500 Rh5DG503700 Rh5DG504000 Rh5DG504100 Rh5DG504700 Rh5DG504900 Rh5DG505000 Rh7AG419500 Rh7AG419800 Rh7CG439300 Rh7DG413100
rosa_wichuraiana Rw0G002880 Rw1G026240 Rw2G005200 Rw2G005210 Rw2G005820 Rw2G009640 Rw5G016980 Rw5G017000 Rw5G017190 Rw5G043880 Rw7G011300 Rw7G034680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 878
AccBSI CCGCTC 1 cut(s) 952
AccII CGCG 3 cut(s) 197, 611, 835
AciI CCGC 6 cut(s) 247, 548, 604, 833, 835, 952
AclWI GGATC 1 cut(s) 179
AcsI RAATTY 1 cut(s) 271
AcuI CTGAAG 1 cut(s) 35
AcvI CACGTG 1 cut(s) 345
AfiI CCNNNNNNNGG 4 cut(s) 372, 412, 470, 498
AflIII ACRYGT 3 cut(s) 342, 1047, 1089
AgeI ACCGGT 1 cut(s) 124
AgsI TTSAA 6 cut(s) 55, 263, 590, 671, 752, 977
AjnI CCWGG 3 cut(s) 116, 783, 908
AluBI AGCT 6 cut(s) 41, 77, 536, 736, 998, 1042
AluI AGCT 6 cut(s) 41, 77, 536, 736, 998, 1042
Alw26I GTCTC 2 cut(s) 52, 309
AlwI GGATC 1 cut(s) 179
AoxI GGCC 1 cut(s) 855
ApeKI GCWGC 5 cut(s) 59, 62, 74, 77, 736
ApoI RAATTY 1 cut(s) 271
AsiGI ACCGGT 1 cut(s) 124
AspLEI GCGC 1 cut(s) 171
AsuC2I CCSGG 1 cut(s) 939
AsuHPI GGTGA 1 cut(s) 647
BaeGI GKGCMC 1 cut(s) 220
BbrPI CACGTG 1 cut(s) 345
BbvCI CCTCAGC 1 cut(s) 37
BbvI GCAGC 5 cut(s) 64, 71, 74, 86, 723
BcgI CGANNNNNNTGC 2 cut(s) 132, 166
BciT130I CCWGG 3 cut(s) 118, 785, 910
BcnI CCSGG 1 cut(s) 939
BcoDI GTCTC 2 cut(s) 52, 309
BfaI CTAG 4 cut(s) 308, 758, 915, 999
BglI GCCNNNNNGGC 1 cut(s) 71
BglII AGATCT 1 cut(s) 552
BisI GCNGC 5 cut(s) 60, 63, 75, 78, 737
BlsI GCNGC 5 cut(s) 61, 64, 76, 79, 738
Bme1390I CCNGG 4 cut(s) 118, 785, 910, 939
BmiI GGNNCC 3 cut(s) 364, 434, 684
BmrFI CCNGG 4 cut(s) 118, 785, 910, 939
BmsI GCATC 6 cut(s) 134, 140, 235, 392, 615, 1099
BplI GAGNNNNNCTC 2 cut(s) 542, 574
Bpu10I CCTNAGC 3 cut(s) 37, 222, 948
BpuMI CCSGG 1 cut(s) 939
BsaAI YACGTR 1 cut(s) 345
BsaBI GATNNNNATC 1 cut(s) 590
BsaJI CCNNGG 4 cut(s) 66, 469, 833, 1025
BsaWI WCCGGW 1 cut(s) 124
BsaXI ACNNNNNCTCC 2 cut(s) 704, 734
Bsc4I CCNNNNNNNGG 4 cut(s) 372, 412, 470, 498
Bse118I RCCGGY 1 cut(s) 124
Bse1I ACTGG 1 cut(s) 965
Bse3DI GCAATG 1 cut(s) 376
Bse8I GATNNNNATC 1 cut(s) 590
BseBI CCWGG 3 cut(s) 118, 785, 910
BseDI CCNNGG 4 cut(s) 66, 469, 833, 1025
BseGI GGATG 1 cut(s) 560
BseJI GATNNNNATC 1 cut(s) 590
BseLI CCNNNNNNNGG 4 cut(s) 372, 412, 470, 498
BseMI GCAATG 1 cut(s) 376
BseMII CTCAG 3 cut(s) 51, 497, 939
BseNI ACTGG 1 cut(s) 965
BseRI GAGGAG 3 cut(s) 725, 728, 731
BseSI GKGCMC 1 cut(s) 220
BseXI GCAGC 5 cut(s) 64, 71, 74, 86, 723
BseYI CCCAGC 1 cut(s) 464
Bsh1236I CGCG 3 cut(s) 197, 611, 835
BshFI GGCC 1 cut(s) 857
BshTI ACCGGT 1 cut(s) 124
BsiSI CCGG 2 cut(s) 125, 939
BslFI GGGAC 1 cut(s) 971
BslI CCNNNNNNNGG 4 cut(s) 372, 412, 470, 498
BsmAI GTCTC 2 cut(s) 52, 309
BsmFI GGGAC 1 cut(s) 971
BsmI GAATGC 1 cut(s) 331
BsnI GGCC 1 cut(s) 857
Bsp1286I GDGCHC 1 cut(s) 220
Bsp143I GATC 4 cut(s) 184, 337, 552, 917
Bsp19I CCATGG 1 cut(s) 66
Bsp68I TCGCGA 1 cut(s) 197
BspACI CCGC 6 cut(s) 247, 548, 604, 833, 835, 952
BspANI GGCC 1 cut(s) 857
BspCNI CTCAG 3 cut(s) 50, 496, 940
BspFNI CGCG 3 cut(s) 197, 611, 835
BspHI TCATGA 1 cut(s) 882
BspLI GGNNCC 3 cut(s) 364, 434, 684
BspPI GGATC 1 cut(s) 179
BsrBI CCGCTC 1 cut(s) 952
BsrDI GCAATG 1 cut(s) 376
BsrFI RCCGGY 1 cut(s) 124
BsrI ACTGG 1 cut(s) 965
BssAI RCCGGY 1 cut(s) 124
BssECI CCNNGG 4 cut(s) 66, 469, 833, 1025
BssMI GATC 4 cut(s) 184, 337, 552, 917
BssT1I CCWWGG 2 cut(s) 66, 1025
Bst2UI CCWGG 3 cut(s) 118, 785, 910
Bst4CI ACNGT 3 cut(s) 165, 773, 902
Bst6I CTCTTC 4 cut(s) 87, 1029, 1071, 1128
BstBAI YACGTR 1 cut(s) 345
BstDEI CTNAG 4 cut(s) 37, 222, 483, 948
BstDSI CCRYGG 2 cut(s) 66, 833
BstENI CCTNNNNNAGG 1 cut(s) 410
BstF5I GGATG 1 cut(s) 560
BstFNI CGCG 3 cut(s) 197, 611, 835
BstHHI GCGC 1 cut(s) 171
BstKTI GATC 4 cut(s) 187, 340, 555, 920
BstMAI GTCTC 2 cut(s) 52, 309
BstMBI GATC 4 cut(s) 184, 337, 552, 917
BstMWI GCNNNNNNNGC 1 cut(s) 71
BstNI CCWGG 3 cut(s) 118, 785, 910
BstNSI RCATGY 2 cut(s) 1051, 1093
BstSCI CCNGG 4 cut(s) 116, 783, 908, 937
BstSLI GKGCMC 1 cut(s) 220
BstUI CGCG 3 cut(s) 197, 611, 835
BstV1I GCAGC 5 cut(s) 64, 71, 74, 86, 723
BstX2I RGATCY 1 cut(s) 552
BstYI RGATCY 1 cut(s) 552
BsuRI GGCC 1 cut(s) 857
BtgI CCRYGG 2 cut(s) 66, 833
BtgZI GCGATG 2 cut(s) 157, 592
BtsCI GGATG 1 cut(s) 560
BtsIMutI CAGTG 1 cut(s) 907
BtuMI TCGCGA 1 cut(s) 197
CciI TCATGA 1 cut(s) 882
CfoI GCGC 1 cut(s) 171
Cfr10I RCCGGY 1 cut(s) 124
Cfr42I CCGCGG 1 cut(s) 836
CseI GACGC 2 cut(s) 142, 600
CspAI ACCGGT 1 cut(s) 124
CviAII CATG 8 cut(s) 67, 576, 618, 883, 1048, 1090, 1115, 1120
DdeI CTNAG 4 cut(s) 37, 222, 483, 948
DpnI GATC 4 cut(s) 186, 339, 554, 919
DpnII GATC 4 cut(s) 184, 337, 552, 917
DraI TTTAAA 1 cut(s) 256
DrdI GACNNNNNNGTC 1 cut(s) 878
DseDI GACNNNNNNGTC 1 cut(s) 878
Eam1104I CTCTTC 4 cut(s) 87, 1029, 1071, 1128
EarI CTCTTC 4 cut(s) 87, 1029, 1071, 1128
Eco130I CCWWGG 2 cut(s) 66, 1025
Eco32I GATATC 1 cut(s) 489
Eco57I CTGAAG 1 cut(s) 35
Eco72I CACGTG 1 cut(s) 345
EcoNI CCTNNNNNAGG 1 cut(s) 410
EcoRII CCWGG 3 cut(s) 116, 783, 908
EcoRV GATATC 1 cut(s) 489
EcoT14I CCWWGG 2 cut(s) 66, 1025
ErhI CCWWGG 2 cut(s) 66, 1025
FaeI CATG 8 cut(s) 70, 579, 621, 886, 1051, 1093, 1118, 1123
FaqI GGGAC 1 cut(s) 971
FatI CATG 8 cut(s) 66, 575, 617, 882, 1047, 1089, 1114, 1119
FauI CCCGC 1 cut(s) 254
Fnu4HI GCNGC 5 cut(s) 60, 63, 75, 78, 737
FokI GGATG 1 cut(s) 547
Fsp4HI GCNGC 5 cut(s) 60, 63, 75, 78, 737
FspBI CTAG 4 cut(s) 308, 758, 915, 999
GlaI GCGC 1 cut(s) 170
GluI GCNGC 5 cut(s) 60, 63, 75, 78, 737
GsaI CCCAGC 1 cut(s) 468
HaeIII GGCC 1 cut(s) 857
HapII CCGG 2 cut(s) 125, 939
HgaI GACGC 2 cut(s) 142, 600
HhaI GCGC 1 cut(s) 171
Hin1II CATG 8 cut(s) 70, 579, 621, 886, 1051, 1093, 1118, 1123
Hin6I GCGC 1 cut(s) 169
HinP1I GCGC 1 cut(s) 169
HinfI GANTC 7 cut(s) 10, 302, 447, 572, 905, 934, 1138
HpaII CCGG 2 cut(s) 125, 939
HphI GGTGA 1 cut(s) 647
Hpy166II GTNNAC 2 cut(s) 161, 441
Hpy188I TCNGA 5 cut(s) 15, 184, 324, 486, 1087
Hpy188III TCNNGA 4 cut(s) 112, 196, 662, 883
Hpy8I GTNNAC 2 cut(s) 161, 441
Hpy99I CGWCG 1 cut(s) 527
HpyAV CCTTC 3 cut(s) 292, 412, 797
HpyCH4III ACNGT 3 cut(s) 165, 773, 902
HpyCH4IV ACGT 1 cut(s) 344
HpyCH4V TGCA 8 cut(s) 80, 106, 147, 205, 369, 409, 1004, 1112
HpyF10VI GCNNNNNNNGC 1 cut(s) 71
HpyF3I CTNAG 4 cut(s) 37, 222, 483, 948
HpySE526I ACGT 1 cut(s) 344
Hsp92II CATG 8 cut(s) 70, 579, 621, 886, 1051, 1093, 1118, 1123
HspAI GCGC 1 cut(s) 169
KspI CCGCGG 1 cut(s) 836
Kzo9I GATC 4 cut(s) 184, 337, 552, 917
LmnI GCTCC 2 cut(s) 334, 368
Lsp1109I GCAGC 5 cut(s) 64, 71, 74, 86, 723
LweI GCATC 6 cut(s) 134, 140, 235, 392, 615, 1099
MaeI CTAG 4 cut(s) 308, 758, 915, 999
MaeII ACGT 1 cut(s) 344
MaeIII GTNAC 1 cut(s) 112
MalI GATC 4 cut(s) 186, 339, 554, 919
MbiI CCGCTC 1 cut(s) 952
MboI GATC 4 cut(s) 184, 337, 552, 917
MflI RGATCY 1 cut(s) 552
MhlI GDGCHC 1 cut(s) 220
MluCI AATT 7 cut(s) 191, 200, 271, 458, 867, 981, 1056
MlyI GAGTC 2 cut(s) 311, 1147
MmeI TCCRAC 1 cut(s) 1110
MnlI CCTC 9 cut(s) 46, 464, 606, 631, 703, 706, 709, 948, 1005
MseI TTAA 4 cut(s) 255, 453, 765, 1150
MslI CAYNNNNRTG 1 cut(s) 1094
MspA1I CMGCKG 3 cut(s) 41, 77, 835
MspI CCGG 2 cut(s) 125, 939
MspR9I CCNGG 4 cut(s) 118, 785, 910, 939
Mva1269I GAATGC 1 cut(s) 331
MvaI CCWGG 3 cut(s) 118, 785, 910
MvnI CGCG 3 cut(s) 197, 611, 835
MwoI GCNNNNNNNGC 1 cut(s) 71
NciI CCSGG 1 cut(s) 939
NcoI CCATGG 1 cut(s) 66
NdeII GATC 4 cut(s) 184, 337, 552, 917
NlaIII CATG 8 cut(s) 70, 579, 621, 886, 1051, 1093, 1118, 1123
NlaIV GGNNCC 3 cut(s) 364, 434, 684
NmeAIII GCCGAG 1 cut(s) 494
NmuCI GTSAC 1 cut(s) 112
NruI TCGCGA 1 cut(s) 197
NspI RCATGY 2 cut(s) 1051, 1093
PagI TCATGA 1 cut(s) 882
PciI ACATGT 2 cut(s) 1047, 1089
PctI GAATGC 1 cut(s) 331
PfeI GAWTC 5 cut(s) 10, 447, 572, 905, 934
PfoI TCCNGGA 1 cut(s) 908
PinAI ACCGGT 1 cut(s) 124
PkrI GCNGC 5 cut(s) 61, 64, 76, 79, 738
PleI GAGTC 2 cut(s) 310, 1146
PmaCI CACGTG 1 cut(s) 345
PmlI CACGTG 1 cut(s) 345
PpsI GAGTC 2 cut(s) 310, 1146
Ppu21I YACGTR 1 cut(s) 345
PscI ACATGT 2 cut(s) 1047, 1089
Psp6I CCWGG 3 cut(s) 116, 783, 908
PspCI CACGTG 1 cut(s) 345
PspFI CCCAGC 1 cut(s) 464
PspGI CCWGG 3 cut(s) 116, 783, 908
PspN4I GGNNCC 3 cut(s) 364, 434, 684
PsuI RGATCY 1 cut(s) 552
PvuII CAGCTG 2 cut(s) 41, 77
RruI TCGCGA 1 cut(s) 197
RseI CAYNNNNRTG 1 cut(s) 1094
SacII CCGCGG 1 cut(s) 836
SaqAI TTAA 4 cut(s) 255, 453, 765, 1150
SatI GCNGC 5 cut(s) 60, 63, 75, 78, 737
Sau3AI GATC 4 cut(s) 184, 337, 552, 917
SchI GAGTC 2 cut(s) 311, 1147
ScrFI CCNGG 4 cut(s) 118, 785, 910, 939
SduI GDGCHC 1 cut(s) 220
SfaNI GCATC 6 cut(s) 134, 140, 235, 392, 615, 1099
Sfr303I CCGCGG 1 cut(s) 836
SgrBI CCGCGG 1 cut(s) 836
SmiMI CAYNNNNRTG 1 cut(s) 1094
Sse9I AATT 7 cut(s) 191, 200, 271, 458, 867, 981, 1056
SsiI CCGC 6 cut(s) 247, 548, 604, 833, 835, 952
SspI AATATT 1 cut(s) 84
SspMI CTAG 4 cut(s) 308, 758, 915, 999
StyD4I CCNGG 4 cut(s) 116, 783, 908, 937
StyI CCWWGG 2 cut(s) 66, 1025
TaaI ACNGT 3 cut(s) 165, 773, 902
TaiI ACGT 1 cut(s) 347
TaqI TCGA 3 cut(s) 336, 702, 1044
TasI AATT 7 cut(s) 191, 200, 271, 458, 867, 981, 1056
TfiI GAWTC 5 cut(s) 10, 447, 572, 905, 934
Tru1I TTAA 4 cut(s) 255, 453, 765, 1150
Tru9I TTAA 4 cut(s) 255, 453, 765, 1150
TscAI CASTG 1 cut(s) 907
TseFI GTSAC 1 cut(s) 112
TseI GCWGC 5 cut(s) 59, 62, 74, 77, 736
Tsp45I GTSAC 1 cut(s) 112
TspDTI ATGAA 7 cut(s) 17, 746, 879, 959, 1049, 1086, 1146
TspGWI ACGGA 1 cut(s) 598
TspRI CASTG 1 cut(s) 907
XagI CCTNNNNNAGG 1 cut(s) 410
XapI RAATTY 1 cut(s) 271
XceI RCATGY 2 cut(s) 1051, 1093
XspI CTAG 4 cut(s) 308, 758, 915, 999
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.